Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0002080

Physical Location & Seq

Genomic Coordinates Reverse (-)

27237043 .. 27243463

Gene Structure 6421 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1224300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1905 bp

ATGGACTACAGCTCTGAAGATGAATCTGATATTAGTGATTCCGAGATCCATGAATACAAAGATAAACCCTATGAGCAGTTACGGGAGGGAAAATATAAAGTAAAGGGTCCTAATGGGACTCTTAGATGCCCCTTTTGTGCGGGGAAGAAGAAACAAGATTACAAGTTTAAGGACCTCCTCCAACATGCTTCAGGGGTGGCCAAAGGTTCTGCTCTCAGAAATGCGAAGCAGAAAGCCAACCACCTTGCCTTGGCACTCTACTTGGAGAATGATCTAGCCAGCGAAGGAGACCAAGTACAGCGTCCAACTTTACCGGCTCCTGTTGCTCAGCAAGAAAAGCAAGAAGACCTCTACGTGTGGCCTTGGACTGGCATTGTTGTAAACATAGTGAGCCAGCCAAAGGATGGAAAAGATCTTCTAGATTCTGGATACTGGATGAGAAAGTTTTCAAAATATAAACCTTCAGAAGTTCGTACTTTGTGCAATGAAGGCAATCCAGCTGCATGCGCTGTAGTATATTTTAGTAAAGATTGGAATGGTTTTGGGAATGCTACTGATTTTGAGAAGACGTTTGAAACCGACTGTCAAAGTAAAAAGGATTGGAATGCACGAAAGGAACAGCCTGGCTCAAGCATCTATGGGTGGTGCGCTCGTGCTGATGATTATCACTCCCAAGGGCAGATAGGGGAGTTTCTTCGCAAGACAGGAGAGCTAAGAACGGTATCTGACATTGTACAGGAAGCAGCTAGAAAAAGAAATGATGTTGTGGCAAGCCTGGCCAATGAAATTGATATGACAAATGAAAATCTGGATGAACTGCGATACAAGTACAATGAGAGGACACTGTCTTTAAGTAGGATGCTTGAAGAGAAAGACCGGCTGCACAATGACTTTGTTAAAGAAACGAGAAAGATGCAGCAAATGGCAAGAAATAATGTTCAGAGAATATTAGAGGAACAAGAAAAATTGAATTATGAGTTGGAGTCTAAAAAAAAGAAACTTGACTCCTGGAGCAAAGAATTAAACAAACGGGAAGCATTGACTGAGCGTGAGAGGCAAAAACTTGACGAGGATAAGAAGAAGAATGATGACAGAAACAATTCACTACAATTGGCTTCCGAGGAGCAGAAAAAGGCTGATGAGAGTGTCTTGAGGCTGGTTGAAATGCAAAAGAGAGAAAAAGAGGATGCCTTAAATAAAATACTTGAGTTAGAAAAGCAGCTGGATGCTAAACAGAAGCTGGAGATGGAGATTGAAGAGCTAAAAGGGAAATTAGAGGTGATGAAGCATCTAGGGGATCAAGATGATGATGCTGTTCAATCAAAGATAAAAGAAATGGAAGATGAATTAGGGGAAAAAGTTGATGAACTTGAGGATTTAGAATCTCTAAATCAAACTCTTATCACCAAAGAACGCCAAAGCAATGATGAGTTACAAGAAGCGCGTAAAGAATTAATAGTGGGTTTGAGTGAAATGTTGAGTGGTCGATCTAATATTGGGATAAAGAGAATGGGTGATCTTGATCAGAAGCCCTTCATGAACACATGCAAGGAACGATTCACTCTTGAGAAAGCACAGGTGCAGGCCTCCACTCTATGTTCCTTGTGGCAGGACAATCTAACAAATCCTGATTGGCATCCTTTCAAGGTTATAACAGTCAATGAGGAGCCCAAGGAAATACTTGATGAGGAAGATGAGAAGCTACGAAATCTGAAGGAGGAGTGGGGCAATGAGATACATGAGTGTGTCGTTACAGCCTTGAAAGAACTTAATGATTACAATCCAAGTGGGAGGTATGTTATCTCTGAACTTTGGAACTTCAAAGAAGGAAGGAAAGCCACACTGAAGGAGGTTATCAGTTTTGTCTTAAAGAGTATTAAGACACTCAAGCGAAAGAGAACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000018 GO:0003674 GO:0003676 GO:0003677 GO:0003723 GO:0003725 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005655 GO:0005730 GO:0005911 GO:0006139 GO:0006259 GO:0006282 GO:0006304 GO:0006305 GO:0006306 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009506 GO:0009892 GO:0009987 GO:0010468 GO:0010569 GO:0010605 GO:0010629 GO:0016070 GO:0016458 GO:0019219 GO:0019222 GO:0030054 GO:0030677 GO:0030681 GO:0031047 GO:0031323 GO:0031974 GO:0031981 GO:0032259 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0043621 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0044728 GO:0046483 GO:0048519 GO:0048583 GO:0050789 GO:0050794 GO:0051052 GO:0051171 GO:0055044 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0080134 GO:0080135 GO:0080188 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1902494 GO:1902555 GO:1905348 GO:1990904 GO:2000779 GO:2001020

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

XH XS zf-XS

Protein Analysis

635

Amino Acids

73.68

Weight (kDa)

5.4

Isoelectric Point (pI)

42.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-XS	PF03470	43 - 85	1.8e-20	XS zinc finger domain
XS	PF03468	115 - 223	9.1e-35	XS domain
XH	PF03469	502 - 632	9.2e-58	XH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0002080)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G15910 AT4G00380 AT4G00380 AT4G00380
fragaria_vesca	FvH4_6g28780 FvH4_6g28780 FvH4_6g28780 FvH4_6g28780
malus_domestica	MD09G1224300.v1.1 MD17G1221900.v1.1 MD17G1222100.v1.1
prunus_persica	Prupe.3G097000_v2.0.a1 Prupe.3G097000_v2.0.a1 Prupe.3G097000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0133161 RchiOBHm_Chr2g0133201 RchiOBHm_Chr5g0067621
rosa_laevigata	RLG00000019313 RLG00000019320
rosa_multiflora	Rmu_sc0000886.1_g000004 Rmu_sc0001962.1_g000037 Rmu_sc0002000.1_g000006 Rmu_sc0003499.1_g000021
rosa_roxburghii	Rroxscaffold_2G00111310 Rroxscaffold_2G00111340
rosa_rugosa	Rorug02G0310400 Rorug02G0310500 Rorug02G0310700 Rorug02G0310800
rosa_samantha	Rh1AG154300 Rh1CG145100 Rh2AG275800 Rh2AG362900 Rh2AG363200 Rh2BG368400 Rh2BG368700 Rh2CG346100 Rh2CG346400 Rh2DG385800 Rh4AG153900 Rh4DG231500
rosa_wichuraiana	Rw2G029490 Rw2G029510 Rw4G020140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1652
AccB7I	CCANNNNNTGG	1 cut(s)	404
AccII	CGCG	1 cut(s)	1444
AciI	CCGC	1 cut(s)	140
AclWI	GGATC	2 cut(s)	40, 1305
AcoI	YGGCCR	2 cut(s)	198, 777
AcuI	CTGAAG	5 cut(s)	36, 174, 447, 1733, 1865
AfaI	GTAC	4 cut(s)	297, 475, 735, 830
AfiI	CCNNNNNNNGG	4 cut(s)	250, 368, 400, 404
AflIII	ACRYGT	1 cut(s)	354
AjnI	CCWGG	3 cut(s)	622, 774, 1007
AjuI	GAANNNNNNNTTGG	2 cut(s)	962, 994
AluBI	AGCT	8 cut(s)	12, 500, 712, 746, 1222, 1240, 1261, 1702
AluI	AGCT	8 cut(s)	12, 500, 712, 746, 1222, 1240, 1261, 1702
Alw26I	GTCTC	1 cut(s)	282
AlwI	GGATC	2 cut(s)	40, 1305
AlwNI	CAGNNNCTG	1 cut(s)	1240
AoxI	GGCC	4 cut(s)	198, 359, 777, 1584
ApeKI	GCWGC	5 cut(s)	500, 743, 880, 916, 1219
AseI	ATTAAT	1 cut(s)	1454
Asp700I	GAANNNNTTC	3 cut(s)	445, 1099, 1532
AspLEI	GCGC	3 cut(s)	509, 650, 1444
AspS9I	GGNCC	2 cut(s)	107, 172
AsuHPI	GGTGA	3 cut(s)	1291, 1396, 1526
AvaII	GGWCC	2 cut(s)	107, 172
BaeI	ACNNNNGTAYC	2 cut(s)	1727, 1760
BalI	TGGCCA	2 cut(s)	200, 779
BanII	GRGCYC	1 cut(s)	1671
BauI	CACGAG	1 cut(s)	651
BbsI	GAAGAC	2 cut(s)	351, 572
BbvI	GCAGC	5 cut(s)	487, 755, 867, 928, 1231
BccI	CCATC	2 cut(s)	398, 1240
BcgI	CGANNNNNNTGC	2 cut(s)	895, 929
BciT130I	CCWGG	3 cut(s)	624, 776, 1009
BciVI	GTATCC	1 cut(s)	422
BclI	TGATCA	1 cut(s)	1522
BcoDI	GTCTC	1 cut(s)	282
BfaI	CTAG	4 cut(s)	275, 419, 747, 1292
BfmI	CTRYAG	2 cut(s)	7, 510
BfuI	GTATCC	1 cut(s)	422
BglII	AGATCT	1 cut(s)	412
BisI	GCNGC	5 cut(s)	501, 744, 881, 917, 1220
BlpI	GCTNAGC	1 cut(s)	327
BlsI	GCNGC	5 cut(s)	502, 745, 882, 918, 1221
Bme1390I	CCNGG	3 cut(s)	624, 776, 1009
Bme18I	GGWCC	2 cut(s)	107, 172
BmgT120I	GGNCC	2 cut(s)	107, 172
BmiI	GGNNCC	3 cut(s)	108, 318, 1668
BmrFI	CCNGG	3 cut(s)	624, 776, 1009
BmsI	GCATC	9 cut(s)	116, 642, 849, 903, 1177, 1216, 1297, 1300, 1645
BpiI	GAAGAC	2 cut(s)	351, 572
BpmI	CTGGAG	2 cut(s)	1030, 1262
Bpu1102I	GCTNAGC	1 cut(s)	327
BpuEI	CTTGAG	6 cut(s)	613, 1171, 1226, 1391, 1586, 1871
BsaAI	YACGTR	1 cut(s)	355
BsaBI	GATNNNNATC	4 cut(s)	663, 1521, 1635, 1779
BsaI	GGTCTC	1 cut(s)	282
BsaJI	CCNNGG	5 cut(s)	249, 362, 673, 1119, 1671
BsaXI	ACNNNNNCTCC	2 cut(s)	279, 309
Bsc4I	CCNNNNNNNGG	4 cut(s)	250, 368, 400, 404
Bse118I	RCCGGY	2 cut(s)	313, 876
Bse1I	ACTGG	2 cut(s)	373, 437
Bse3DI	GCAATG	3 cut(s)	490, 1429, 1735
Bse8I	GATNNNNATC	4 cut(s)	663, 1521, 1635, 1779
BseBI	CCWGG	3 cut(s)	624, 776, 1009
BseDI	CCNNGG	5 cut(s)	249, 362, 673, 1119, 1671
BseGI	GGATG	7 cut(s)	409, 441, 817, 864, 1192, 1231, 1636
BseJI	GATNNNNATC	4 cut(s)	663, 1521, 1635, 1779
BseLI	CCNNNNNNNGG	4 cut(s)	250, 368, 400, 404
BseMI	GCAATG	3 cut(s)	490, 1429, 1735
BseMII	CTCAG	3 cut(s)	229, 341, 1035
BseNI	ACTGG	2 cut(s)	373, 437
BseRI	GAGGAG	4 cut(s)	167, 1136, 1679, 1733
BseXI	GCAGC	5 cut(s)	487, 755, 867, 928, 1231
BsgI	GTGCAG	2 cut(s)	866, 1601
Bsh1236I	CGCG	1 cut(s)	1444
BshFI	GGCC	4 cut(s)	200, 361, 779, 1586
BsiSI	CCGG	2 cut(s)	314, 877
BslFI	GGGAC	1 cut(s)	130
BslI	CCNNNNNNNGG	4 cut(s)	250, 368, 400, 404
BsmAI	GTCTC	1 cut(s)	282
BsmFI	GGGAC	1 cut(s)	130
BsmI	GAATGC	2 cut(s)	553, 610
BsnI	GGCC	4 cut(s)	200, 361, 779, 1586
Bso31I	GGTCTC	1 cut(s)	282
Bsp1286I	GDGCHC	1 cut(s)	1671
Bsp1407I	TGTACA	1 cut(s)	733
Bsp143I	GATC	7 cut(s)	45, 271, 412, 1297, 1487, 1516, 1522
Bsp1720I	GCTNAGC	1 cut(s)	327
BspACI	CCGC	1 cut(s)	140
BspANI	GGCC	4 cut(s)	200, 361, 779, 1586
BspCNI	CTCAG	3 cut(s)	228, 340, 1036
BspFNI	CGCG	1 cut(s)	1444
BspHI	TCATGA	1 cut(s)	1536
BspLI	GGNNCC	3 cut(s)	108, 318, 1668
BspPI	GGATC	2 cut(s)	40, 1305
BspQI	GCTCTTC	1 cut(s)	1251
BspTNI	GGTCTC	1 cut(s)	282
BsrDI	GCAATG	3 cut(s)	490, 1429, 1735
BsrFI	RCCGGY	2 cut(s)	313, 876
BsrGI	TGTACA	1 cut(s)	733
BsrI	ACTGG	2 cut(s)	373, 437
BssAI	RCCGGY	2 cut(s)	313, 876
BssECI	CCNNGG	5 cut(s)	249, 362, 673, 1119, 1671
BssMI	GATC	7 cut(s)	45, 271, 412, 1297, 1487, 1516, 1522
BssSI	CACGAG	1 cut(s)	651
BssT1I	CCWWGG	4 cut(s)	249, 362, 673, 1671
Bst2BI	CACGAG	1 cut(s)	651
Bst2UI	CCWGG	3 cut(s)	624, 776, 1009
Bst4CI	ACNGT	4 cut(s)	584, 721, 846, 1657
Bst6I	CTCTTC	2 cut(s)	861, 1251
BstAUI	TGTACA	1 cut(s)	733
BstBAI	YACGTR	1 cut(s)	355
BstC8I	GCNNGC	5 cut(s)	280, 395, 505, 772, 1584
BstDEI	CTNAG	5 cut(s)	122, 215, 327, 713, 1044
BstF5I	GGATG	7 cut(s)	409, 441, 817, 864, 1192, 1231, 1636
BstFNI	CGCG	1 cut(s)	1444
BstHHI	GCGC	3 cut(s)	509, 650, 1444
BstKTI	GATC	7 cut(s)	48, 274, 415, 1300, 1490, 1519, 1525
BstMAI	GTCTC	1 cut(s)	282
BstMBI	GATC	7 cut(s)	45, 271, 412, 1297, 1487, 1516, 1522
BstMWI	GCNNNNNNNGC	6 cut(s)	323, 337, 489, 506, 776, 1054
BstNI	CCWGG	3 cut(s)	624, 776, 1009
BstNSI	RCATGY	3 cut(s)	188, 507, 1548
BstSCI	CCNGG	3 cut(s)	622, 774, 1007
BstSFI	CTRYAG	2 cut(s)	7, 510
BstUI	CGCG	1 cut(s)	1444
BstV1I	GCAGC	5 cut(s)	487, 755, 867, 928, 1231
BstV2I	GAAGAC	2 cut(s)	351, 572
BstX2I	RGATCY	2 cut(s)	45, 412
BstYI	RGATCY	2 cut(s)	45, 412
BsuI	GTATCC	1 cut(s)	422
BsuRI	GGCC	4 cut(s)	200, 361, 779, 1586
BtsCI	GGATG	7 cut(s)	409, 441, 817, 864, 1192, 1231, 1636
BtsIMutI	CAGTG	2 cut(s)	842, 1841
Cac8I	GCNNGC	5 cut(s)	280, 395, 505, 772, 1584
CaiI	CAGNNNCTG	1 cut(s)	1240
CciI	TCATGA	1 cut(s)	1536
CfoI	GCGC	3 cut(s)	509, 650, 1444
Cfr10I	RCCGGY	2 cut(s)	313, 876
Cfr13I	GGNCC	2 cut(s)	107, 172
CseI	GACGC	1 cut(s)	290
Csp6I	GTAC	4 cut(s)	296, 474, 734, 829
CspCI	CAANNNNNGTGG	2 cut(s)	1768, 1803
CviAII	CATG	7 cut(s)	50, 185, 504, 1537, 1545, 1739, 1902
CviQI	GTAC	4 cut(s)	296, 474, 734, 829
DdeI	CTNAG	5 cut(s)	122, 215, 327, 713, 1044
DpnI	GATC	7 cut(s)	47, 273, 414, 1299, 1489, 1518, 1524
DpnII	GATC	7 cut(s)	45, 271, 412, 1297, 1487, 1516, 1522
EaeI	YGGCCR	2 cut(s)	198, 777
Eam1104I	CTCTTC	2 cut(s)	861, 1251
EarI	CTCTTC	2 cut(s)	861, 1251
Eco130I	CCWWGG	4 cut(s)	249, 362, 673, 1671
Eco147I	AGGCCT	1 cut(s)	1586
Eco24I	GRGCYC	1 cut(s)	1671
Eco31I	GGTCTC	1 cut(s)	282
Eco47I	GGWCC	2 cut(s)	107, 172
Eco57I	CTGAAG	5 cut(s)	36, 174, 447, 1733, 1865
EcoO109I	RGGNCCY	2 cut(s)	107, 172
EcoRII	CCWGG	3 cut(s)	622, 774, 1007
EcoT14I	CCWWGG	4 cut(s)	249, 362, 673, 1671
EcoT38I	GRGCYC	1 cut(s)	1671
ErhI	CCWWGG	4 cut(s)	249, 362, 673, 1671
FaeI	CATG	7 cut(s)	53, 188, 507, 1540, 1548, 1742, 1905
FaqI	GGGAC	1 cut(s)	130
FatI	CATG	7 cut(s)	49, 184, 503, 1536, 1544, 1738, 1901
FauI	CCCGC	1 cut(s)	133
FbaI	TGATCA	1 cut(s)	1522
Fnu4HI	GCNGC	5 cut(s)	501, 744, 881, 917, 1220
FokI	GGATG	7 cut(s)	416, 448, 824, 871, 1199, 1238, 1623
FriOI	GRGCYC	1 cut(s)	1671
Fsp4HI	GCNGC	5 cut(s)	501, 744, 881, 917, 1220
FspBI	CTAG	4 cut(s)	275, 419, 747, 1292
GlaI	GCGC	3 cut(s)	508, 649, 1443
GluI	GCNGC	5 cut(s)	501, 744, 881, 917, 1220
GsuI	CTGGAG	2 cut(s)	1030, 1262
HaeIII	GGCC	4 cut(s)	200, 361, 779, 1586
HapII	CCGG	2 cut(s)	314, 877
HgaI	GACGC	1 cut(s)	290
HhaI	GCGC	3 cut(s)	509, 650, 1444
Hin1II	CATG	7 cut(s)	53, 188, 507, 1540, 1548, 1742, 1905
Hin6I	GCGC	3 cut(s)	507, 648, 1442
HinP1I	GCGC	3 cut(s)	507, 648, 1442
HinfI	GANTC	8 cut(s)	23, 38, 118, 422, 983, 1004, 1382, 1557
HpaII	CCGG	2 cut(s)	314, 877
HphI	GGTGA	3 cut(s)	1291, 1396, 1526
Hpy166II	GTNNAC	1 cut(s)	382
Hpy188III	TCNNGA	9 cut(s)	419, 426, 809, 1150, 1301, 1520, 1537, 1565, 1628
Hpy8I	GTNNAC	1 cut(s)	382
HpyAV	CCTTC	8 cut(s)	278, 471, 482, 1543, 1708, 1820, 1824, 1840
HpyCH4III	ACNGT	4 cut(s)	584, 721, 846, 1657
HpyCH4IV	ACGT	2 cut(s)	354, 569
HpyCH4V	TGCA	8 cut(s)	483, 503, 608, 883, 916, 1168, 1548, 1582
HpyF10VI	GCNNNNNNNGC	6 cut(s)	323, 337, 489, 506, 776, 1054
HpyF3I	CTNAG	5 cut(s)	122, 215, 327, 713, 1044
HpySE526I	ACGT	2 cut(s)	354, 569
Hsp92II	CATG	7 cut(s)	53, 188, 507, 1540, 1548, 1742, 1905
HspAI	GCGC	3 cut(s)	507, 648, 1442
Ksp22I	TGATCA	1 cut(s)	1522
Kzo9I	GATC	7 cut(s)	45, 271, 412, 1297, 1487, 1516, 1522
LguI	GCTCTTC	1 cut(s)	1251
LmnI	GCTCC	4 cut(s)	322, 1011, 1123, 1666
Lsp1109I	GCAGC	5 cut(s)	487, 755, 867, 928, 1231
LweI	GCATC	9 cut(s)	116, 642, 849, 903, 1177, 1216, 1297, 1300, 1645
MaeI	CTAG	4 cut(s)	275, 419, 747, 1292
MaeII	ACGT	2 cut(s)	354, 569
MaeIII	GTNAC	3 cut(s)	78, 1431, 1750
MalI	GATC	7 cut(s)	47, 273, 414, 1299, 1489, 1518, 1524
MboI	GATC	7 cut(s)	45, 271, 412, 1297, 1487, 1516, 1522
MfeI	CAATTG	1 cut(s)	1109
MflI	RGATCY	2 cut(s)	45, 412
MhlI	GDGCHC	1 cut(s)	1671
MlsI	TGGCCA	2 cut(s)	200, 779
MluCI	AATT	9 cut(s)	786, 965, 970, 1019, 1099, 1109, 1271, 1346, 1451
MluNI	TGGCCA	2 cut(s)	200, 779
MlyI	GAGTC	3 cut(s)	112, 992, 998
MmeI	TCCRAC	3 cut(s)	205, 329, 960
Mox20I	TGGCCA	2 cut(s)	200, 779
MroXI	GAANNNNTTC	3 cut(s)	445, 1099, 1532
MscI	TGGCCA	2 cut(s)	200, 779
MseI	TTAA	9 cut(s)	168, 851, 897, 1022, 1193, 1454, 1770, 1868, 1878
MslI	CAYNNNNRTG	1 cut(s)	1743
Msp20I	TGGCCA	2 cut(s)	200, 779
MspA1I	CMGCKG	2 cut(s)	500, 1222
MspI	CCGG	2 cut(s)	314, 877
MspR9I	CCNGG	3 cut(s)	624, 776, 1009
MunI	CAATTG	1 cut(s)	1109
Mva1269I	GAATGC	2 cut(s)	553, 610
MvaI	CCWGG	3 cut(s)	624, 776, 1009
MvnI	CGCG	1 cut(s)	1444
MwoI	GCNNNNNNNGC	6 cut(s)	323, 337, 489, 506, 776, 1054
NdeII	GATC	7 cut(s)	45, 271, 412, 1297, 1487, 1516, 1522
NlaIII	CATG	7 cut(s)	53, 188, 507, 1540, 1548, 1742, 1905
NlaIV	GGNNCC	3 cut(s)	108, 318, 1668
NspI	RCATGY	3 cut(s)	188, 507, 1548
PaeI	GCATGC	1 cut(s)	507
PagI	TCATGA	1 cut(s)	1536
PceI	AGGCCT	1 cut(s)	1586
PciSI	GCTCTTC	1 cut(s)	1251
PctI	GAATGC	2 cut(s)	553, 610
PdmI	GAANNNNTTC	3 cut(s)	445, 1099, 1532
PfeI	GAWTC	5 cut(s)	23, 38, 422, 1382, 1557
PflFI	GACNNNGTC	1 cut(s)	844
PflMI	CCANNNNNTGG	1 cut(s)	404
PfoI	TCCNGGA	1 cut(s)	1007
PkrI	GCNGC	5 cut(s)	502, 745, 882, 918, 1221
PleI	GAGTC	3 cut(s)	112, 991, 998
PpsI	GAGTC	3 cut(s)	112, 991, 998
Ppu21I	YACGTR	1 cut(s)	355
PpuMI	RGGWCCY	2 cut(s)	107, 172
PshBI	ATTAAT	1 cut(s)	1454
PsiI	TTATAA	1 cut(s)	1652
Psp5II	RGGWCCY	2 cut(s)	107, 172
Psp6I	CCWGG	3 cut(s)	622, 774, 1007
PspGI	CCWGG	3 cut(s)	622, 774, 1007
PspN4I	GGNNCC	3 cut(s)	108, 318, 1668
PspPI	GGNCC	2 cut(s)	107, 172
PspPPI	RGGWCCY	2 cut(s)	107, 172
PstNI	CAGNNNCTG	1 cut(s)	1240
PsuI	RGATCY	2 cut(s)	45, 412
PsyI	GACNNNGTC	1 cut(s)	844
PvuII	CAGCTG	2 cut(s)	500, 1222
RsaI	GTAC	4 cut(s)	297, 475, 735, 830
RsaNI	GTAC	4 cut(s)	296, 474, 734, 829
RseI	CAYNNNNRTG	1 cut(s)	1743
SapI	GCTCTTC	1 cut(s)	1251
SaqAI	TTAA	9 cut(s)	168, 851, 897, 1022, 1193, 1454, 1770, 1868, 1878
SatI	GCNGC	5 cut(s)	501, 744, 881, 917, 1220
Sau3AI	GATC	7 cut(s)	45, 271, 412, 1297, 1487, 1516, 1522
Sau96I	GGNCC	2 cut(s)	107, 172
SchI	GAGTC	3 cut(s)	112, 992, 998
ScrFI	CCNGG	3 cut(s)	624, 776, 1009
SduI	GDGCHC	1 cut(s)	1671
SfaNI	GCATC	9 cut(s)	116, 642, 849, 903, 1177, 1216, 1297, 1300, 1645
SfcI	CTRYAG	2 cut(s)	7, 510
SinI	GGWCC	2 cut(s)	107, 172
SmiMI	CAYNNNNRTG	1 cut(s)	1743
SmlI	CTYRAG	6 cut(s)	628, 1150, 1205, 1370, 1565, 1886
SmoI	CTYRAG	6 cut(s)	628, 1150, 1205, 1370, 1565, 1886
SphI	GCATGC	1 cut(s)	507
Sse9I	AATT	9 cut(s)	786, 965, 970, 1019, 1099, 1109, 1271, 1346, 1451
SseBI	AGGCCT	1 cut(s)	1586
SsiI	CCGC	1 cut(s)	140
SspI	AATATT	2 cut(s)	948, 1495
SspMI	CTAG	4 cut(s)	275, 419, 747, 1292
StuI	AGGCCT	1 cut(s)	1586
StyD4I	CCNGG	3 cut(s)	622, 774, 1007
StyI	CCWWGG	4 cut(s)	249, 362, 673, 1671
TaaI	ACNGT	4 cut(s)	584, 721, 846, 1657
TaiI	ACGT	2 cut(s)	357, 572
TaqI	TCGA	1 cut(s)	1486
TasI	AATT	9 cut(s)	786, 965, 970, 1019, 1099, 1109, 1271, 1346, 1451
TatI	WGTACW	3 cut(s)	295, 733, 828
TfiI	GAWTC	5 cut(s)	23, 38, 422, 1382, 1557
Tru1I	TTAA	9 cut(s)	168, 851, 897, 1022, 1193, 1454, 1770, 1868, 1878
Tru9I	TTAA	9 cut(s)	168, 851, 897, 1022, 1193, 1454, 1770, 1868, 1878
TscAI	CASTG	2 cut(s)	849, 1848
TseI	GCWGC	5 cut(s)	500, 743, 880, 916, 1219
TspRI	CASTG	2 cut(s)	849, 1848
Tth111I	GACNNNGTC	1 cut(s)	844
Van91I	CCANNNNNTGG	1 cut(s)	404
VpaK11BI	GGWCC	2 cut(s)	107, 172
VspI	ATTAAT	1 cut(s)	1454
XbaI	TCTAGA	1 cut(s)	418
XceI	RCATGY	3 cut(s)	188, 507, 1548
XcmI	CCANNNNNNNNNTGG	1 cut(s)	401
XmnI	GAANNNNTTC	3 cut(s)	445, 1099, 1532
XspI	CTAG	4 cut(s)	275, 419, 747, 1292

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.