Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002010

Physical Location & Seq

Genomic Coordinates Forward (+)

7303985 .. 7307237

Gene Structure 3253 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G12290.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2226 bp

ATGGACCAAAAAAGCTTTTTCCGGTTGATTTTTCTCATAGTCACAGCTGGTTTCATCATCTCCTTCACTTCCACTAACTTCCCTCACGCGCCGACGAGGCTTCTTGATTGCACCGACTCTTCTTCTTCACCTCTTTGCGCTTCGAGAAACTTTCTTTTCAACAAACAACAACCACGACCTATTCCTAAACATGATCCTAAACCAAATACCAAAAACCATGATCACGTGTCCGATACACCAAACCATCCTCTAGACCCACTCACGGTGTCGGAGATTAACAAAATCCGATCAATACTCTCTTCTCACGCGCTATTCACTTCCGGTACACCACACGCGCTCCACACCGTCGTTCTTGAAGAGCCTGAGAAGAATCTTGTCCGTCACTGGGAAAAAGGGAACCCACTTCCTCCGAGGAAAGCTTCCGTCATCGCACGTGTTGGCGCGGACACGCACGTGCTCACCGTTGATATCTCTACGGGTCGGGTAGATTCAGAGAATAGCCCGGTTCGTGTTTCTGGTTACCCGATGATGACTATAGAAGAGATGAACGATATCACTGTTGTACCATTTTCAAACGCGGATTTCAACCGTACGATCATCTCTCGTGGAGTTAATCTAACGGACGTGATTTGTTTCCCAATCTCTTGTGGTTGGTTTGGTAATAAAGAAGAAAACGCGAGGGTAATTAAAAGTCAGTGTTTCATGACACAAGGAACACCTAACTTCTACATGCGTCCTATCGAAGGTTTAACCATTCTCATCGATTTAGATACAAAGCAAGTGATCGAGATAACCGATACAGGTCGGGCTATACCCATACCCGGTTCAACCAATACCGATTACCGCTTCCAAAAGCTCGCAACCACCGACAAAACTCGGCCTCTAAACCCGATATCCATTGAGCAGCCACGTGGTCCAAGCTTCGTGATAGAGGACAACCATCTAGTGAAATGGGCAAATTGGGAATTTCATCTAAAACCTGACCCGAGAGCAGGTGTGGTAATATCACGGGTAAGAGTACACGACCCGGATACTCATGAGACACGTGACGTGATGTACAAAGGTTTCGTGTCTGAACTTTTTGTTCCGTACATGGATCCATCGGACGCGTGGTACTTTAAGACTTACATGGACGCAGGGGAATACGGGTTCGGGTTACAAGCCATGCCACTCGTACCGCTTAATGATTGTCCACGAAACGCAGCCTATATGGACGGAGTTTTCGCCGCAGCCGATGGAACACCGTTCGTGAGAGAAAACATGGTTTGTATCTTTGAGAGTTACGCCGGAGATATTGGGTGGCGTCACTCCGAAAGCCCCATCACCGGTATACCGATAAGGGAAGTGAGACCAAAAGTGACGCTAGTGGTACGAATGGCAGCTTCGGTAGGTAACTATGATTACATCATTGATTACGAGTTCCAAACTGATGGGCTTATAAAAGCTAAGGTCGGGCTAAGTGGAATACTAATGGTGAAAGGGACAACATATCAAAACAAAAACCAAGTGGAGAAAGATAAAGACGGTAATGAAGAAGAGCTTCACGGCACGCTTCTGTCTGAAAATGTAATTGGAGTAATACACGATCACTACGTCACTTTTTACCTTGACCTTGACGTCGATGGCCCGGACAACTCATTTGTTAAAGTGAATCTCAAGAGGCAAGAGACCGAGCCAGGCGAGTCACCGAGGAAAAGTTACCTAAAAGCTGTTAGGAACATTGCGAAAACCGAAAAGGATGGTCAGATCAAGCTTAGCTTGTACGATCCATCAGAATTCCACGTCATCAACTCTGGTAAAACCACTCGGGTCGGAAACCCGACGGGTTATAAGGTCGTTCCTAGAACGACGGCAGCTAGTCTACTTGACCATGATGATCCGCCGCAGAAGAGAGGAGCTTTTACCAACAACCAAATTTGGGTCACTCCGTACAATAAGTCGGAGCAATGGGCTGGTGGCTTGTTCACTTACCAAAGCCATGGTGATGACACTCTTGCAGTTTGGTCAGACAGGGATAGAGACATAGAGAACAAGGATATAGTTGTGTGGTATACACTTGGTTTCCATCACATTCCATGTCAAGAAGATTTTCCGATAATGCCCACGGTTTCTTCGAGTTTCGATTTGAAGCCCGTAAACTTTTTCGAGCGCAATCCAATCCTCAGTGCCGCTCCAAACTTTGAACATGATCTCCCGGTTTGTGGAGTTCAATCTGTTTCTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0001505 GO:0006807 GO:0006809 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009987 GO:0010033 GO:0017144 GO:0023052 GO:0032870 GO:0033993 GO:0034641 GO:0042133 GO:0042136 GO:0042221 GO:0044237 GO:0044249 GO:0044271 GO:0046209 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0065008 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0072593 GO:0097305 GO:0097306 GO:1901700 GO:1901701 GO:1903409 GO:2001057

KEGG Pathways

Metabolic & Signaling

ko00260 ko00350 ko00360 ko00410 ko00950 ko00960 ko01100 ko01110 map00260 map00350 map00360 map00410 map00950 map00960 map01100 map01110

Pfam Domains

Protein Families

Cu_amine_oxid Cu_amine_oxidN2 Cu_amine_oxidN3

Protein Analysis

741

Amino Acids

83.23

Weight (kDa)

5.8

Isoelectric Point (pI)

37.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu_amine_oxidN2	PF02727	82 - 167	2.9e-30	Copper amine oxidase, N2 domain
Cu_amine_oxidN3	PF02728	175 - 274	1e-33	Copper amine oxidase, N3 domain
Cu_amine_oxid	PF01179	299 - 670	2.9e-109	Copper amine oxidase, enzyme domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002010)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G12270 AT4G12280 AT4G12290 AT4G12290
fragaria_vesca	FvH4_5g00610 FvH4_5g00610 FvH4_5g00610 FvH4_5g00610 FvH4_5g00610
malus_domestica	MD02G1257400.v1.1 MD06G1075500.v1.1 MD16G1192400.v1.1
prunus_persica	Prupe.5G078700_v2.0.a1 Prupe.5G078900_v2.0.a1
pyrus_communis	pycom09g07970 pycom13g04890 pycom15g15380 pycom15g15390
rosa_chinensis	RchiOBHm_Chr5g0060271 RchiOBHm_Chr7g0201651 RchiOBHm_Chr7g0201661
rosa_laevigata	RLG00000003658
rosa_multiflora	Rmu_sc0001512.1_g000015 Rmu_sc0004811.1_g000006 Rmu_sc0004811.1_g000008 Rmu_sc0004811.1_g000009 Rmu_sc0004811.1_g000010 Rmu_sc0004811.1_g000011
rosa_roxburghii	Rroxscaffold_3G00255130 Rroxscaffold_3G00255140 Rroxscaffold_3G00255150 Rroxscaffold_6G00396720
rosa_rugosa	Rorug07G0065300 Rorug07G0065300
rosa_samantha	Rh7AG192300 Rh7AG192500 Rh7BG194400 Rh7BG194500 Rh7BG194600 Rh7CG203500 Rh7CG203600 Rh7CG203700 Rh7DG197700
rosa_wichuraiana	Rw7G016860 Rw7G016870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1439, 1830
AarI	CACCTGC	1 cut(s)	983
AasI	GACNNNNNNGTC	1 cut(s)	1616
AatII	GACGTC	1 cut(s)	1620
Acc36I	ACCTGC	1 cut(s)	983
AccBSI	CCGCTC	1 cut(s)	2171
AccI	GTMKAC	3 cut(s)	1330, 1861, 2051
AccII	CGCG	7 cut(s)	89, 308, 335, 443, 578, 677, 1109
AciI	CCGC	8 cut(s)	443, 578, 844, 1178, 1227, 1880, 1883, 2169
AclWI	GGATC	5 cut(s)	188, 1091, 1104, 1760, 1871
AcsI	RAATTY	3 cut(s)	965, 1775, 1914
AcvI	CACGTG	5 cut(s)	226, 434, 454, 911, 1046
AcyI	GRCGYC	2 cut(s)	1303, 1617
AfiI	CCNNNNNNNGG	8 cut(s)	262, 385, 743, 821, 992, 1325, 1918, 2201
AflIII	ACRYGT	4 cut(s)	225, 433, 1043, 1107
AgeI	ACCGGT	1 cut(s)	1325
AgsI	TTSAA	8 cut(s)	160, 356, 573, 586, 828, 2128, 2183, 2210
AjiI	CACGTC	3 cut(s)	625, 1051, 1783
AjnI	CCWGG	1 cut(s)	1675
AjuI	GAANNNNNNNTTGG	2 cut(s)	1554, 1586
AleI	CACNNNNGTG	1 cut(s)	452
AloI	GAACNNNNNNTCC	4 cut(s)	1133, 1165, 2175, 2207
Alw21I	GWGCWC	1 cut(s)	459
Alw26I	GTCTC	4 cut(s)	1034, 1342, 1661, 2013
AlwI	GGATC	5 cut(s)	188, 1091, 1104, 1760, 1871
Ama87I	CYCGRG	2 cut(s)	985, 1806
AoxI	GGCC	2 cut(s)	878, 1624
ApeKI	GCWGC	5 cut(s)	904, 1202, 1229, 1379, 1853
ApoI	RAATTY	3 cut(s)	965, 1775, 1914
ArsI	GACNNNNNNTTYG	4 cut(s)	1205, 1237, 1622, 1654
AsiGI	ACCGGT	1 cut(s)	1325
Asp700I	GAANNNNTTC	2 cut(s)	1539, 2088
AspLEI	GCGC	6 cut(s)	91, 140, 310, 337, 443, 2151
AspS9I	GGNCC	3 cut(s)	4, 914, 1625
AsuC2I	CCSGG	5 cut(s)	503, 822, 1028, 1628, 2195
AsuHPI	GGTGA	6 cut(s)	120, 451, 1315, 1486, 1677, 1994
AvaI	CYCGRG	2 cut(s)	985, 1806
AvaII	GGWCC	2 cut(s)	4, 914
BaeI	ACNNNNGTAYC	2 cut(s)	546, 579
BamHI	GGATCC	1 cut(s)	1096
BauI	CACGAG	1 cut(s)	603
BbrPI	CACGTG	5 cut(s)	226, 434, 454, 911, 1046
Bbv12I	GWGCWC	1 cut(s)	459
BbvI	GCAGC	5 cut(s)	916, 1214, 1241, 1391, 1865
BceAI	ACGGC	2 cut(s)	1561, 1866
BciT130I	CCWGG	1 cut(s)	1677
BciVI	GTATCC	1 cut(s)	1024
BclI	TGATCA	1 cut(s)	220
BcnI	CCSGG	5 cut(s)	503, 822, 1028, 1628, 2195
BcoDI	GTCTC	4 cut(s)	1034, 1342, 1661, 2013
BfaI	CTAG	5 cut(s)	251, 944, 1364, 1842, 1857
BfmI	CTRYAG	1 cut(s)	534
BfuAI	ACCTGC	1 cut(s)	983
BfuI	GTATCC	1 cut(s)	1024
BglI	GCCNNNNNGGC	1 cut(s)	97
BisI	GCNGC	8 cut(s)	905, 1203, 1227, 1230, 1380, 1854, 1883, 2169
BlpI	GCTNAGC	1 cut(s)	1754
BlsI	GCNGC	8 cut(s)	906, 1204, 1228, 1231, 1381, 1855, 1884, 2170
Bme1390I	CCNGG	6 cut(s)	503, 822, 1028, 1628, 1677, 2195
Bme18I	GGWCC	2 cut(s)	4, 914
BmeT110I	CYCGRG	2 cut(s)	985, 1806
BmgBI	CACGTC	3 cut(s)	625, 1051, 1783
BmgT120I	GGNCC	3 cut(s)	4, 914, 1625
BmiI	GGNNCC	2 cut(s)	398, 1098
BmrFI	CCNGG	6 cut(s)	503, 822, 1028, 1628, 1677, 2195
BmrI	ACTGGG	1 cut(s)	394
BmuI	ACTGGG	1 cut(s)	394
Bpu10I	CCTNAGC	1 cut(s)	1446
Bpu1102I	GCTNAGC	1 cut(s)	1754
BpuEI	CTTGAG	1 cut(s)	1640
BpuMI	CCSGG	5 cut(s)	503, 822, 1028, 1628, 2195
Bsa29I	ATCGAT	1 cut(s)	762
BsaAI	YACGTR	5 cut(s)	226, 434, 454, 911, 1046
BsaHI	GRCGYC	2 cut(s)	1303, 1617
BsaI	GGTCTC	2 cut(s)	1342, 1661
BsaJI	CCNNGG	4 cut(s)	410, 1688, 1978, 2103
BsaWI	WCCGGW	3 cut(s)	21, 320, 1325
BsaXI	ACNNNNNCTCC	4 cut(s)	321, 351, 2175, 2205
Bsc4I	CCNNNNNNNGG	8 cut(s)	262, 385, 743, 821, 992, 1325, 1918, 2201
Bse118I	RCCGGY	1 cut(s)	1325
Bse1I	ACTGG	1 cut(s)	389
Bse3DI	GCAATG	2 cut(s)	1719, 1952
BseBI	CCWGG	1 cut(s)	1677
BseCI	ATCGAT	1 cut(s)	762
BseDI	CCNNGG	4 cut(s)	410, 1688, 1978, 2103
BseGI	GGATG	2 cut(s)	244, 1744
BseLI	CCNNNNNNNGG	8 cut(s)	262, 385, 743, 821, 992, 1325, 1918, 2201
BseMI	GCAATG	2 cut(s)	1719, 1952
BseMII	CTCAG	2 cut(s)	354, 2176
BseNI	ACTGG	1 cut(s)	389
BseRI	GAGGAG	1 cut(s)	1908
BseXI	GCAGC	5 cut(s)	916, 1214, 1241, 1391, 1865
Bsh1236I	CGCG	7 cut(s)	89, 308, 335, 443, 578, 677, 1109
BshFI	GGCC	2 cut(s)	880, 1626
BshTI	ACCGGT	1 cut(s)	1325
BshVI	ATCGAT	1 cut(s)	762
BsiHKAI	GWGCWC	1 cut(s)	459
BsiHKCI	CYCGRG	2 cut(s)	985, 1806
BsiSI	CCGG	9 cut(s)	22, 321, 503, 822, 1028, 1287, 1326, 1628, 2195
BsiWI	CGTACG	1 cut(s)	590
BslFI	GGGAC	1 cut(s)	1495
BslI	CCNNNNNNNGG	8 cut(s)	262, 385, 743, 821, 992, 1325, 1918, 2201
BsmAI	GTCTC	4 cut(s)	1034, 1342, 1661, 2013
BsmFI	GGGAC	1 cut(s)	1495
BsnI	GGCC	2 cut(s)	880, 1626
Bso31I	GGTCTC	2 cut(s)	1342, 1661
BsoBI	CYCGRG	2 cut(s)	985, 1806
Bsp1286I	GDGCHC	1 cut(s)	459
Bsp1407I	TGTACA	1 cut(s)	1056
Bsp1720I	GCTNAGC	1 cut(s)	1754
Bsp19I	CCATGG	1 cut(s)	1978
BspACI	CCGC	8 cut(s)	443, 578, 844, 1178, 1227, 1880, 1883, 2169
BspANI	GGCC	2 cut(s)	880, 1626
BspCNI	CTCAG	2 cut(s)	355, 2175
BspDI	ATCGAT	1 cut(s)	762
BspFNI	CGCG	7 cut(s)	89, 308, 335, 443, 578, 677, 1109
BspHI	TCATGA	2 cut(s)	702, 1036
BspLI	GGNNCC	2 cut(s)	398, 1098
BspMI	ACCTGC	1 cut(s)	983
BspPI	GGATC	5 cut(s)	188, 1091, 1104, 1760, 1871
BspQI	GCTCTTC	2 cut(s)	351, 1530
BspTNI	GGTCTC	2 cut(s)	1342, 1661
BsrBI	CCGCTC	1 cut(s)	2171
BsrDI	GCAATG	2 cut(s)	1719, 1952
BsrFI	RCCGGY	1 cut(s)	1325
BsrGI	TGTACA	1 cut(s)	1056
BsrI	ACTGG	1 cut(s)	389
BssAI	RCCGGY	1 cut(s)	1325
BssECI	CCNNGG	4 cut(s)	410, 1688, 1978, 2103
BssNAI	GTATAC	2 cut(s)	1331, 2052
BssNI	GRCGYC	2 cut(s)	1303, 1617
BssSI	CACGAG	1 cut(s)	603
BssT1I	CCWWGG	1 cut(s)	1978
Bst1107I	GTATAC	2 cut(s)	1331, 2052
Bst2BI	CACGAG	1 cut(s)	603
Bst2UI	CCWGG	1 cut(s)	1677
Bst4CI	ACNGT	8 cut(s)	265, 346, 463, 559, 590, 1245, 1526, 2107
Bst6I	CTCTTC	6 cut(s)	124, 304, 351, 534, 1530, 1883
BstACI	GRCGYC	2 cut(s)	1303, 1617
BstAUI	TGTACA	1 cut(s)	1056
BstBAI	YACGTR	5 cut(s)	226, 434, 454, 911, 1046
BstC8I	GCNNGC	2 cut(s)	858, 1550
BstDEI	CTNAG	5 cut(s)	363, 1446, 1457, 1754, 2162
BstDSI	CCRYGG	2 cut(s)	1978, 2103
BstEII	GGTNACC	1 cut(s)	518
BstENI	CCTNNNNNAGG	1 cut(s)	741
BstF5I	GGATG	2 cut(s)	244, 1744
BstFNI	CGCG	7 cut(s)	89, 308, 335, 443, 578, 677, 1109
BstHHI	GCGC	6 cut(s)	91, 140, 310, 337, 443, 2151
BstMAI	GTCTC	4 cut(s)	1034, 1342, 1661, 2013
BstMWI	GCNNNNNNNGC	1 cut(s)	97
BstNI	CCWGG	1 cut(s)	1677
BstNSI	RCATGY	1 cut(s)	733
BstPI	GGTNACC	1 cut(s)	518
BstSCI	CCNGG	6 cut(s)	501, 820, 1026, 1626, 1675, 2193
BstSFI	CTRYAG	1 cut(s)	534
BstUI	CGCG	7 cut(s)	89, 308, 335, 443, 578, 677, 1109
BstV1I	GCAGC	5 cut(s)	916, 1214, 1241, 1391, 1865
BstX2I	RGATCY	1 cut(s)	1096
BstXI	CCANNNNNNTGG	2 cut(s)	1430, 1979
BstYI	RGATCY	1 cut(s)	1096
BstZ17I	GTATAC	2 cut(s)	1331, 2052
Bsu15I	ATCGAT	1 cut(s)	762
BsuI	GTATCC	1 cut(s)	1024
BsuRI	GGCC	2 cut(s)	880, 1626
BsuTUI	ATCGAT	1 cut(s)	762
BtgI	CCRYGG	2 cut(s)	1978, 2103
BtgZI	GCGATG	1 cut(s)	412
BtrI	CACGTC	3 cut(s)	625, 1051, 1783
BtsCI	GGATG	2 cut(s)	244, 1744
BtsIMutI	CAGTG	4 cut(s)	382, 555, 701, 2170
BveI	ACCTGC	1 cut(s)	983
Cac8I	GCNNGC	2 cut(s)	858, 1550
CciI	TCATGA	2 cut(s)	702, 1036
CfoI	GCGC	6 cut(s)	91, 140, 310, 337, 443, 2151
Cfr10I	RCCGGY	1 cut(s)	1325
Cfr13I	GGNCC	3 cut(s)	4, 914, 1625
ClaI	ATCGAT	1 cut(s)	762
CseI	GACGC	5 cut(s)	722, 1115, 1142, 1292, 1369
CspAI	ACCGGT	1 cut(s)	1325
DdeI	CTNAG	5 cut(s)	363, 1446, 1457, 1754, 2162
DrdI	GACNNNNNNGTC	1 cut(s)	1616
DseDI	GACNNNNNNGTC	1 cut(s)	1616
Eam1104I	CTCTTC	6 cut(s)	124, 304, 351, 534, 1530, 1883
EarI	CTCTTC	6 cut(s)	124, 304, 351, 534, 1530, 1883
EciI	GGCGGA	1 cut(s)	1869
Eco130I	CCWWGG	1 cut(s)	1978
Eco31I	GGTCTC	2 cut(s)	1342, 1661
Eco32I	GATATC	3 cut(s)	469, 553, 894
Eco47I	GGWCC	2 cut(s)	4, 914
Eco72I	CACGTG	5 cut(s)	226, 434, 454, 911, 1046
Eco88I	CYCGRG	2 cut(s)	985, 1806
Eco91I	GGTNACC	1 cut(s)	518
EcoNI	CCTNNNNNAGG	1 cut(s)	741
EcoO65I	GGTNACC	1 cut(s)	518
EcoRI	GAATTC	1 cut(s)	1775
EcoRII	CCWGG	1 cut(s)	1675
EcoRV	GATATC	3 cut(s)	469, 553, 894
EcoT14I	CCWWGG	1 cut(s)	1978
ErhI	CCWWGG	1 cut(s)	1978
FalI	AAGNNNNNCTT	4 cut(s)	1524, 1556, 1742, 1774
FaqI	GGGAC	1 cut(s)	1495
FbaI	TGATCA	1 cut(s)	220
FblI	GTMKAC	3 cut(s)	1330, 1861, 2051
Fnu4HI	GCNGC	8 cut(s)	905, 1203, 1227, 1230, 1380, 1854, 1883, 2169
FokI	GGATG	2 cut(s)	231, 1751
Fsp4HI	GCNGC	8 cut(s)	905, 1203, 1227, 1230, 1380, 1854, 1883, 2169
FspBI	CTAG	5 cut(s)	251, 944, 1364, 1842, 1857
GlaI	GCGC	6 cut(s)	90, 139, 309, 336, 442, 2150
GluI	GCNGC	8 cut(s)	905, 1203, 1227, 1230, 1380, 1854, 1883, 2169
HaeIII	GGCC	2 cut(s)	880, 1626
HapII	CCGG	9 cut(s)	22, 321, 503, 822, 1028, 1287, 1326, 1628, 2195
HgaI	GACGC	5 cut(s)	722, 1115, 1142, 1292, 1369
HhaI	GCGC	6 cut(s)	91, 140, 310, 337, 443, 2151
Hin1I	GRCGYC	2 cut(s)	1303, 1617
Hin6I	GCGC	6 cut(s)	89, 138, 308, 335, 441, 2149
HinP1I	GCGC	6 cut(s)	89, 138, 308, 335, 441, 2149
HindIII	AAGCTT	4 cut(s)	13, 417, 919, 1751
HinfI	GANTC	5 cut(s)	116, 370, 488, 1651, 1682
HpaII	CCGG	9 cut(s)	22, 321, 503, 822, 1028, 1287, 1326, 1628, 2195
HphI	GGTGA	6 cut(s)	120, 451, 1315, 1486, 1677, 1994
Hpy166II	GTNNAC	8 cut(s)	326, 1021, 1193, 1331, 1862, 1965, 2052, 2137
Hpy8I	GTNNAC	8 cut(s)	326, 1021, 1193, 1331, 1862, 1965, 2052, 2137
Hpy99I	CGWCG	5 cut(s)	97, 350, 1622, 1825, 1852
HpyAV	CCTTC	2 cut(s)	73, 737
HpyCH4III	ACNGT	8 cut(s)	265, 346, 463, 559, 590, 1245, 1526, 2107
HpyCH4V	TGCA	2 cut(s)	111, 1997
HpyF10VI	GCNNNNNNNGC	1 cut(s)	97
HpyF3I	CTNAG	5 cut(s)	363, 1446, 1457, 1754, 2162
Hsp92I	GRCGYC	2 cut(s)	1303, 1617
HspAI	GCGC	6 cut(s)	89, 138, 308, 335, 441, 2149
Ksp22I	TGATCA	1 cut(s)	220
LguI	GCTCTTC	2 cut(s)	351, 1530
LmnI	GCTCC	4 cut(s)	342, 1895, 1942, 2176
Lsp1109I	GCAGC	5 cut(s)	916, 1214, 1241, 1391, 1865
MaeI	CTAG	5 cut(s)	251, 944, 1364, 1842, 1857
MbiI	CCGCTC	1 cut(s)	2171
MflI	RGATCY	1 cut(s)	1096
MhlI	GDGCHC	1 cut(s)	459
MluCI	AATT	6 cut(s)	684, 958, 965, 1569, 1775, 1914
MluI	ACGCGT	1 cut(s)	1107
MlyI	GAGTC	2 cut(s)	110, 1691
MmeI	TCCRAC	3 cut(s)	249, 1792, 1920
MroXI	GAANNNNTTC	2 cut(s)	1539, 2088
MseI	TTAA	7 cut(s)	276, 612, 687, 749, 1119, 1182, 1644
MslI	CAYNNNNRTG	2 cut(s)	452, 1983
MspA1I	CMGCKG	1 cut(s)	47
MspI	CCGG	9 cut(s)	22, 321, 503, 822, 1028, 1287, 1326, 1628, 2195
MspR9I	CCNGG	6 cut(s)	503, 822, 1028, 1628, 1677, 2195
MvaI	CCWGG	1 cut(s)	1677
MvnI	CGCG	7 cut(s)	89, 308, 335, 443, 578, 677, 1109
MwoI	GCNNNNNNNGC	1 cut(s)	97
NciI	CCSGG	5 cut(s)	503, 822, 1028, 1628, 2195
NcoI	CCATGG	1 cut(s)	1978
NlaIV	GGNNCC	2 cut(s)	398, 1098
NmeAIII	GCCGAG	1 cut(s)	856
NmuCI	GTSAC	8 cut(s)	40, 380, 1046, 1304, 1357, 1594, 1683, 1921
NspI	RCATGY	1 cut(s)	733
OliI	CACNNNNGTG	1 cut(s)	452
PagI	TCATGA	2 cut(s)	702, 1036
PaqCI	CACCTGC	1 cut(s)	983
PciSI	GCTCTTC	2 cut(s)	351, 1530
PcsI	WCGNNNNNNNCGW	6 cut(s)	459, 792, 864, 1230, 1590, 2111
PdmI	GAANNNNTTC	2 cut(s)	1539, 2088
PfeI	GAWTC	3 cut(s)	370, 488, 1651
Pfl23II	CGTACG	1 cut(s)	590
PinAI	ACCGGT	1 cut(s)	1325
PkrI	GCNGC	8 cut(s)	906, 1204, 1228, 1231, 1381, 1855, 1884, 2170
PleI	GAGTC	2 cut(s)	110, 1690
PmaCI	CACGTG	5 cut(s)	226, 434, 454, 911, 1046
PmlI	CACGTG	5 cut(s)	226, 434, 454, 911, 1046
PpsI	GAGTC	2 cut(s)	110, 1690
Ppu21I	YACGTR	5 cut(s)	226, 434, 454, 911, 1046
PsiI	TTATAA	2 cut(s)	1439, 1830
Psp6I	CCWGG	1 cut(s)	1675
PspCI	CACGTG	5 cut(s)	226, 434, 454, 911, 1046
PspEI	GGTNACC	1 cut(s)	518
PspGI	CCWGG	1 cut(s)	1675
PspLI	CGTACG	1 cut(s)	590
PspN4I	GGNNCC	2 cut(s)	398, 1098
PspPI	GGNCC	3 cut(s)	4, 914, 1625
PsuI	RGATCY	1 cut(s)	1096
PvuII	CAGCTG	1 cut(s)	47
RseI	CAYNNNNRTG	2 cut(s)	452, 1983
SapI	GCTCTTC	2 cut(s)	351, 1530
SaqAI	TTAA	7 cut(s)	276, 612, 687, 749, 1119, 1182, 1644
SatI	GCNGC	8 cut(s)	905, 1203, 1227, 1230, 1380, 1854, 1883, 2169
Sau96I	GGNCC	3 cut(s)	4, 914, 1625
SchI	GAGTC	2 cut(s)	110, 1691
ScrFI	CCNGG	6 cut(s)	503, 822, 1028, 1628, 1677, 2195
SduI	GDGCHC	1 cut(s)	459
SfcI	CTRYAG	1 cut(s)	534
SinI	GGWCC	2 cut(s)	4, 914
SmiMI	CAYNNNNRTG	2 cut(s)	452, 1983
SmlI	CTYRAG	1 cut(s)	1655
SmoI	CTYRAG	1 cut(s)	1655
Sse9I	AATT	6 cut(s)	684, 958, 965, 1569, 1775, 1914
SsiI	CCGC	8 cut(s)	443, 578, 844, 1178, 1227, 1880, 1883, 2169
SspMI	CTAG	5 cut(s)	251, 944, 1364, 1842, 1857
StyD4I	CCNGG	6 cut(s)	501, 820, 1026, 1626, 1675, 2193
StyI	CCWWGG	1 cut(s)	1978
TaaI	ACNGT	8 cut(s)	265, 346, 463, 559, 590, 1245, 1526, 2107
TaqI	TCGA	8 cut(s)	143, 741, 762, 786, 1620, 2114, 2121, 2145
TaqII	GACCGA	1 cut(s)	1685
TasI	AATT	6 cut(s)	684, 958, 965, 1569, 1775, 1914
TatI	WGTACW	2 cut(s)	1018, 1056
TauI	GCSGC	3 cut(s)	1229, 1885, 2171
TfiI	GAWTC	3 cut(s)	370, 488, 1651
Tru1I	TTAA	7 cut(s)	276, 612, 687, 749, 1119, 1182, 1644
Tru9I	TTAA	7 cut(s)	276, 612, 687, 749, 1119, 1182, 1644
TscAI	CASTG	4 cut(s)	389, 562, 701, 2170
TseFI	GTSAC	8 cut(s)	40, 380, 1046, 1304, 1357, 1594, 1683, 1921
TseI	GCWGC	5 cut(s)	904, 1202, 1229, 1379, 1853
Tsp45I	GTSAC	8 cut(s)	40, 380, 1046, 1304, 1357, 1594, 1683, 1921
TspDTI	ATGAA	5 cut(s)	43, 560, 691, 959, 1545
TspGWI	ACGGA	6 cut(s)	368, 412, 635, 1077, 1230, 1917
TspRI	CASTG	4 cut(s)	389, 562, 701, 2170
VpaK11BI	GGWCC	2 cut(s)	4, 914
XagI	CCTNNNNNAGG	1 cut(s)	741
XapI	RAATTY	3 cut(s)	965, 1775, 1914
XbaI	TCTAGA	1 cut(s)	250
XceI	RCATGY	1 cut(s)	733
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1107
XmiI	GTMKAC	3 cut(s)	1330, 1861, 2051
XmnI	GAANNNNTTC	2 cut(s)	1539, 2088
XspI	CTAG	5 cut(s)	251, 944, 1364, 1842, 1857
ZraI	GACGTC	1 cut(s)	1618

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.