Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0002010

Physical Location & Seq

Genomic Coordinates Forward (+)

18087328 .. 18091372

Gene Structure 4045 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG203500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2190 bp

ATGGAAACCCCAAACTTCTTCCGCTTCTGCTCTCTCTCTATCTGCGCCGGACTTGTCCTCCTCTTCACTTGGTCTCACTTCCCTTCCGGACCGGACCTCCTCGACTGCACCACCAACTCTGCATGGTGCACCTCCAAGAACCGCTTCCAATCCAAGCAACCAAGCCACCTCAAAAACCGCCACAACAACCCCACGAGCCACCGCAACCACGCCTCCGACACGCCCCATCACCCGCTAGACCCGCTCACGGTTCAAGAGATTAACAAAATCAGAACCATCATCTCCTCCCAGCCGATCTTCTCAACCTCCGCTGGCTACGCGCTCCACTCCATCGAGCTGGAGGAGCCGGAGAAGCCTCTCGTCCTGAAATGGAAAGAGGGCGACCCGCTGTTTCCGAGGAAGGCCTCCGTCGTCGCGCGTGTGAAAGGCGAGTCGCACGTGCTGACCGTCGACTTGACCACCAGCGAGGTCACCGTGCATCAGACCGGTCCCCATTCCGGTTATCCTACGATGACGCTGGAGGACATGACCACGGCCACGTGGGCCCCGCTGGTGGACGCGACGTTCAACCGCACGATCATCGAACGAGGGGTTGATCTGACGGACCTGGCTTGCCTGCCGATTTCGCCGGGATGGTACGGTAAAACGGAGGAGAACAGGAGGCTGATTAAGGTGCAGTGCTACTCCATGAAAGATACGGTGAACTTCTACATGAGGCCAATCGAAGGGTTGACCGTGCTCCTTGACTTGGACACTAAACAAGTGGTGGAGATTTCAGATAAGGGCGCGAACATTCCTATACCAACTGCCGCCAACACGGACTATAGGTACGCGGCTCAGAAGCAAAACCAGGTGATCAAGCTACTAAAGCCAATATCAATAGAGCAACCCAAGGGTCCGAGTTTTACAGTAGAGGATGACCACTTGGTCAAGTGGGCAAATTGGGAATTTCATGTGAAGCCCGACGCCAGGGCGGGGGTGATCGTGTCTCGGGCTAAGGTCCGAGACCCCGATACCGGAGAATTGAGGGATGTCATGTACAAAGGGTTCACTTCGGAGTTGTTTGTGCCTTACATGGACCCTACCGATGCTTGGTACTTCAAGACTTATATGGATGCGGGCGAATACGGGTTTGGATTGCAAGCCATGCCTCTCGAACCCCTTAATGATTGCCCGCGTAACGCCCATTATATGGATGGGGTGTTTGTGGCGGCCGACGGAACACCTTATGTCCGATCCAATATGGTTTGCATTTTCGAGAGCTATGCAGGTGATATCGGGTGGCGCCACACGGAGAGTCCCATAACGGGCATGGAGATTAGAGAAGTAAGGCCAAAAGTGACATTAGTAGTTAGAATGGCAGCATCAGTTGCCAACTACGATTATATTGTGGACTGGGAGTTCCAAACAGATGGACTAATAAGAATTAAGGTTGGACTTAGTGGCATTTTGATGGTGAAAGGCACACCCTATCAGAACGTGAACCAAGTCTCTGGCCAAGAAAGTCTCTATGGCACACTTCTATCTGAAAACGTTATAGGAGTTATTCATGATCATTACATCACATTTCATCTTGATATGGACGTGGACGGCTCTGATAATTCCTTTGTGAAAGTGAATCTCCAAAGAGAGCAAAACTCTCCTAGTGAGTCACCAAGGAAAAGCTTCTTGAAAGCTACTAGAAATGTGGCTAAAACGGAGAAGGATGCACAAGTTAAGCTAAAACTTTATGACCCGTCCGAGTTCCATGTGATCAACCCGTCGAAAAAGACCCGAGTTGGGAACCCTGTTGGGTATAAGGTGGTTCCCGGTGGCACTGCTGCTAGCTTGCTTGATCTTGATGATCCTCCCCAAAAGAGGGGTGCTTTCACAAACAATCAAATATGGGTTACCCAATACAACAGAAGCGAGCAGTGGGCAGGCGGGTTGTTCGTCTACCAGAGCCAAGGTGAAGATACCCTAGCTGTGTGGTCTAACAGGGATCGAGAAATTGAGAATAAGGACATTGTAGTTTGGTATACATTAGGGTTTCATCACATACCATGTCAAGAAGACTTCCCCATAATGCCTACAGTGTCAGCTAGCTTTGATCTAAAGCCTGTAAATTTCTTTGAGAGCAACCCCATACTTCGGACTCCGCCTAATGTTGAGACGGATCTGCCTGTTTGCGAGGCTGCTACTGCTGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0001505 GO:0006807 GO:0006809 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009987 GO:0010033 GO:0017144 GO:0023052 GO:0032870 GO:0033993 GO:0034641 GO:0042133 GO:0042136 GO:0042221 GO:0044237 GO:0044249 GO:0044271 GO:0046209 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0065008 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0072593 GO:0097305 GO:0097306 GO:1901700 GO:1901701 GO:1903409 GO:2001057

KEGG Pathways

Metabolic & Signaling

ko00260 ko00350 ko00360 ko00410 ko00950 ko00960 ko01100 ko01110 map00260 map00350 map00360 map00410 map00950 map00960 map01100 map01110

Pfam Domains

Protein Families

Cu_amine_oxid Cu_amine_oxidN2 Cu_amine_oxidN3

Protein Analysis

729

Amino Acids

81.96

Weight (kDa)

5.75

Isoelectric Point (pI)

37.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu_amine_oxidN2	PF02727	77 - 158	8.3e-21	Copper amine oxidase, N2 domain
Cu_amine_oxidN3	PF02728	169 - 268	6.1e-24	Copper amine oxidase, N3 domain
Cu_amine_oxid	PF01179	293 - 709	7.5e-141	Copper amine oxidase, enzyme domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002010)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G12270 AT4G12280 AT4G12290 AT4G12290
fragaria_vesca	FvH4_5g00610 FvH4_5g00610 FvH4_5g00610 FvH4_5g00610 FvH4_5g00610
malus_domestica	MD02G1257400.v1.1 MD06G1075500.v1.1 MD16G1192400.v1.1
prunus_persica	Prupe.5G078700_v2.0.a1 Prupe.5G078900_v2.0.a1
pyrus_communis	pycom09g07970 pycom13g04890 pycom15g15380 pycom15g15390
rosa_chinensis	RchiOBHm_Chr5g0060271 RchiOBHm_Chr7g0201651 RchiOBHm_Chr7g0201661
rosa_laevigata	RLG00000003658
rosa_multiflora	Rmu_sc0001512.1_g000015 Rmu_sc0004811.1_g000006 Rmu_sc0004811.1_g000008 Rmu_sc0004811.1_g000009 Rmu_sc0004811.1_g000010 Rmu_sc0004811.1_g000011
rosa_roxburghii	Rroxscaffold_3G00255130 Rroxscaffold_3G00255140 Rroxscaffold_3G00255150 Rroxscaffold_6G00396720
rosa_rugosa	Rorug07G0065300 Rorug07G0065300
rosa_samantha	Rh7AG192300 Rh7AG192500 Rh7BG194400 Rh7BG194500 Rh7BG194600 Rh7CG203500 Rh7CG203600 Rh7CG203700 Rh7DG197700
rosa_wichuraiana	Rw7G016860 Rw7G016870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1259
AasI	GACNNNNNNGTC	1 cut(s)	926
Acc36I	ACCTGC	1 cut(s)	1259
AccB1I	GGYRCC	1 cut(s)	1284
AccB7I	CCANNNNNTGG	1 cut(s)	1192
AccBSI	CCGCTC	1 cut(s)	244
AccI	GTMKAC	3 cut(s)	450, 1935, 2018
AccII	CGCG	7 cut(s)	320, 416, 418, 560, 788, 833, 1177
AccIII	TCCGGA	1 cut(s)	86
AclI	AACGTT	1 cut(s)	1533
AclWI	GGATC	4 cut(s)	1230, 1838, 1989, 2163
AcoI	YGGCCR	3 cut(s)	534, 1212, 1495
AcsI	RAATTY	2 cut(s)	947, 2104
AcvI	CACGTG	2 cut(s)	439, 540
AcyI	GRCGYC	2 cut(s)	966, 1285
AfaI	GTAC	4 cut(s)	638, 830, 1040, 1097
AgeI	ACCGGT	1 cut(s)	485
AgsI	TTSAA	4 cut(s)	254, 568, 1102, 1672
AjiI	CACGTC	1 cut(s)	1585
AjnI	CCWGG	3 cut(s)	606, 849, 968
AjuI	GAANNNNNNNTTGG	4 cut(s)	128, 160, 1116, 1148
AloI	GAACNNNNNNTCC	4 cut(s)	548, 580, 1385, 1417
Alw21I	GWGCWC	2 cut(s)	131, 741
Alw26I	GTCTC	6 cut(s)	78, 993, 999, 1495, 1511, 2144
Alw44I	GTGCAC	1 cut(s)	127
AlwI	GGATC	4 cut(s)	1230, 1838, 1989, 2163
Ama87I	CYCGRG	2 cut(s)	990, 1773
Aor13HI	TCCGGA	1 cut(s)	86
AoxI	GGCC	7 cut(s)	402, 534, 543, 716, 1212, 1331, 1495
ApaI	GGGCCC	1 cut(s)	547
ApaLI	GTGCAC	1 cut(s)	127
ApeKI	GCWGC	4 cut(s)	1361, 1820, 2174, 2183
ApoI	RAATTY	2 cut(s)	947, 2104
AsiGI	ACCGGT	1 cut(s)	485
Asp700I	GAANNNNTTC	2 cut(s)	143, 1664
AspLEI	GCGC	5 cut(s)	47, 322, 418, 788, 1287
AspS9I	GGNCC	9 cut(s)	89, 94, 488, 543, 544, 604, 896, 1000, 1078
AsuC2I	CCSGG	2 cut(s)	630, 1809
AsuHPI	GGTGA	9 cut(s)	221, 463, 712, 865, 991, 1283, 1468, 1644, 1961
AsuNHI	GCTAGC	2 cut(s)	1823, 2081
AvaI	CYCGRG	2 cut(s)	990, 1773
AvaII	GGWCC	7 cut(s)	89, 94, 488, 604, 896, 1000, 1078
BaeGI	GKGCMC	2 cut(s)	131, 547
BalI	TGGCCA	1 cut(s)	1497
BanI	GGYRCC	1 cut(s)	1284
BanII	GRGCYC	1 cut(s)	547
BauI	CACGAG	1 cut(s)	193
BbrPI	CACGTG	2 cut(s)	439, 540
BbsI	GAAGAC	1 cut(s)	2058
Bbv12I	GWGCWC	2 cut(s)	131, 741
BbvI	GCAGC	4 cut(s)	1373, 1807, 2161, 2170
BccI	CCATC	7 cut(s)	234, 284, 338, 627, 1190, 1406, 1447
BceAI	ACGGC	2 cut(s)	549, 1606
BcgI	CGANNNNNNTGC	4 cut(s)	562, 596, 1247, 1281
BciT130I	CCWGG	3 cut(s)	608, 851, 970
BclI	TGATCA	3 cut(s)	855, 1552, 1752
BcnI	CCSGG	2 cut(s)	630, 1809
BcoDI	GTCTC	6 cut(s)	78, 993, 999, 1495, 1511, 2144
BfaI	CTAG	6 cut(s)	236, 1644, 1680, 1824, 1961, 2082
BfmI	CTRYAG	2 cut(s)	823, 2070
BfoI	RGCGCY	1 cut(s)	1288
BfuAI	ACCTGC	1 cut(s)	1259
BglI	GCCNNNNNGGC	1 cut(s)	542
BisI	GCNGC	7 cut(s)	810, 834, 1212, 1362, 1821, 2175, 2184
BlsI	GCNGC	7 cut(s)	811, 835, 1213, 1363, 1822, 2176, 2185
Bme1390I	CCNGG	5 cut(s)	608, 630, 851, 970, 1809
Bme18I	GGWCC	7 cut(s)	89, 94, 488, 604, 896, 1000, 1078
BmeT110I	CYCGRG	2 cut(s)	990, 1773
BmgBI	CACGTC	1 cut(s)	1585
BmgT120I	GGNCC	9 cut(s)	89, 94, 488, 543, 544, 604, 896, 1000, 1078
BmiI	GGNNCC	9 cut(s)	345, 490, 545, 546, 897, 1080, 1286, 1784, 1806
BmrFI	CCNGG	5 cut(s)	608, 630, 851, 970, 1809
BmrI	ACTGGG	1 cut(s)	1405
BmsI	GCATC	5 cut(s)	487, 1078, 1105, 1373, 1696
BmtI	GCTAGC	2 cut(s)	1827, 2085
BmuI	ACTGGG	1 cut(s)	1405
BpiI	GAAGAC	1 cut(s)	2058
BplI	GAGNNNNNCTC	2 cut(s)	1622, 1654
BpmI	CTGGAG	2 cut(s)	359, 539
Bpu10I	CCTNAGC	1 cut(s)	996
BpuMI	CCSGG	2 cut(s)	630, 1809
BsaAI	YACGTR	2 cut(s)	439, 540
BsaHI	GRCGYC	2 cut(s)	966, 1285
BsaI	GGTCTC	2 cut(s)	78, 999
BsaJI	CCNNGG	6 cut(s)	395, 531, 891, 969, 1655, 1945
BsaWI	WCCGGW	5 cut(s)	86, 91, 485, 497, 1016
BsaXI	ACNNNNNCTCC	6 cut(s)	42, 72, 81, 111, 197, 227
Bse118I	RCCGGY	1 cut(s)	485
Bse1I	ACTGG	1 cut(s)	1400
BseAI	TCCGGA	1 cut(s)	86
BseBI	CCWGG	3 cut(s)	608, 851, 970
BseDI	CCNNGG	6 cut(s)	395, 531, 891, 969, 1655, 1945
BseGI	GGATG	6 cut(s)	638, 922, 1036, 1120, 1201, 1711
BseMII	CTCAG	1 cut(s)	851
BseNI	ACTGG	1 cut(s)	1400
BseRI	GAGGAG	5 cut(s)	50, 89, 274, 356, 665
BseSI	GKGCMC	2 cut(s)	131, 547
BseX3I	CGGCCG	1 cut(s)	1212
BseXI	GCAGC	4 cut(s)	1373, 1807, 2161, 2170
BseYI	CCCAGC	1 cut(s)	288
BsgI	GTGCAG	2 cut(s)	91, 695
Bsh1236I	CGCG	7 cut(s)	320, 416, 418, 560, 788, 833, 1177
Bsh1285I	CGRYCG	1 cut(s)	1215
BshFI	GGCC	7 cut(s)	404, 536, 545, 718, 1214, 1333, 1497
BshNI	GGYRCC	1 cut(s)	1284
BshTI	ACCGGT	1 cut(s)	485
BsiEI	CGRYCG	1 cut(s)	1215
BsiHKAI	GWGCWC	2 cut(s)	131, 741
BsiHKCI	CYCGRG	2 cut(s)	990, 1773
BsiSI	CCGG	9 cut(s)	48, 87, 92, 347, 486, 498, 629, 1017, 1809
BslFI	GGGAC	2 cut(s)	474, 1284
BsmAI	GTCTC	6 cut(s)	78, 993, 999, 1495, 1511, 2144
BsmBI	CGTCTC	1 cut(s)	2144
BsmFI	GGGAC	2 cut(s)	474, 1284
BsnI	GGCC	7 cut(s)	404, 536, 545, 718, 1214, 1333, 1497
Bso31I	GGTCTC	2 cut(s)	78, 999
BsoBI	CYCGRG	2 cut(s)	990, 1773
Bsp120I	GGGCCC	1 cut(s)	543
Bsp1286I	GDGCHC	3 cut(s)	131, 547, 741
Bsp13I	TCCGGA	1 cut(s)	86
Bsp1407I	TGTACA	1 cut(s)	1038
BspANI	GGCC	7 cut(s)	404, 536, 545, 718, 1214, 1333, 1497
BspCNI	CTCAG	1 cut(s)	850
BspEI	TCCGGA	1 cut(s)	86
BspFNI	CGCG	7 cut(s)	320, 416, 418, 560, 788, 833, 1177
BspHI	TCATGA	1 cut(s)	1549
BspLI	GGNNCC	9 cut(s)	345, 490, 545, 546, 897, 1080, 1286, 1784, 1806
BspMI	ACCTGC	1 cut(s)	1259
BspOI	GCTAGC	2 cut(s)	1827, 2085
BspPI	GGATC	4 cut(s)	1230, 1838, 1989, 2163
BspT107I	GGYRCC	1 cut(s)	1284
BspTNI	GGTCTC	2 cut(s)	78, 999
BsrBI	CCGCTC	1 cut(s)	244
BsrFI	RCCGGY	1 cut(s)	485
BsrGI	TGTACA	1 cut(s)	1038
BsrI	ACTGG	1 cut(s)	1400
BssAI	RCCGGY	1 cut(s)	485
BssECI	CCNNGG	6 cut(s)	395, 531, 891, 969, 1655, 1945
BssNAI	GTATAC	1 cut(s)	2019
BssNI	GRCGYC	2 cut(s)	966, 1285
BssSI	CACGAG	1 cut(s)	193
BssT1I	CCWWGG	3 cut(s)	891, 1655, 1945
Bst1107I	GTATAC	1 cut(s)	2019
Bst2BI	CACGAG	1 cut(s)	193
Bst2UI	CCWGG	3 cut(s)	608, 851, 970
Bst4CI	ACNGT	8 cut(s)	250, 448, 475, 641, 700, 736, 910, 2074
Bst6I	CTCTTC	1 cut(s)	68
BstACI	GRCGYC	2 cut(s)	966, 1285
BstAPI	GCANNNNNTGC	2 cut(s)	1147, 1370
BstAUI	TGTACA	1 cut(s)	1038
BstBAI	YACGTR	2 cut(s)	439, 540
BstDEI	CTNAG	4 cut(s)	837, 996, 1439, 2187
BstDSI	CCRYGG	1 cut(s)	531
BstEII	GGTNACC	2 cut(s)	469, 1888
BstF5I	GGATG	6 cut(s)	638, 922, 1036, 1120, 1201, 1711
BstFNI	CGCG	7 cut(s)	320, 416, 418, 560, 788, 833, 1177
BstH2I	RGCGCY	1 cut(s)	1288
BstHHI	GCGC	5 cut(s)	47, 322, 418, 788, 1287
BstMAI	GTCTC	6 cut(s)	78, 993, 999, 1495, 1511, 2144
BstMCI	CGRYCG	1 cut(s)	1215
BstNI	CCWGG	3 cut(s)	608, 851, 970
BstPI	GGTNACC	2 cut(s)	469, 1888
BstSCI	CCNGG	5 cut(s)	606, 628, 849, 968, 1807
BstSFI	CTRYAG	2 cut(s)	823, 2070
BstSLI	GKGCMC	2 cut(s)	131, 547
BstUI	CGCG	7 cut(s)	320, 416, 418, 560, 788, 833, 1177
BstV1I	GCAGC	4 cut(s)	1373, 1807, 2161, 2170
BstV2I	GAAGAC	1 cut(s)	2058
BstX2I	RGATCY	1 cut(s)	2155
BstXI	CCANNNNNNTGG	3 cut(s)	337, 1412, 1493
BstYI	RGATCY	1 cut(s)	2155
BstZ17I	GTATAC	1 cut(s)	2019
BstZI	CGGCCG	1 cut(s)	1212
BsuRI	GGCC	7 cut(s)	404, 536, 545, 718, 1214, 1333, 1497
BtgI	CCRYGG	1 cut(s)	531
BtrI	CACGTC	1 cut(s)	1585
BtsCI	GGATG	6 cut(s)	638, 922, 1036, 1120, 1201, 1711
BtsI	GCAGTG	3 cut(s)	683, 1815, 1919
BtsIMutI	CAGTG	4 cut(s)	683, 1815, 1919, 2079
BveI	ACCTGC	1 cut(s)	1259
CciI	TCATGA	1 cut(s)	1549
CfoI	GCGC	5 cut(s)	47, 322, 418, 788, 1287
Cfr10I	RCCGGY	1 cut(s)	485
Cfr13I	GGNCC	9 cut(s)	89, 94, 488, 543, 544, 604, 896, 1000, 1078
CpoI	CGGWCCG	1 cut(s)	89
CseI	GACGC	3 cut(s)	523, 566, 974
CsiI	ACCWGGT	1 cut(s)	849
Csp6I	GTAC	4 cut(s)	637, 829, 1039, 1096
CspAI	ACCGGT	1 cut(s)	485
CspI	CGGWCCG	1 cut(s)	89
CviQI	GTAC	4 cut(s)	637, 829, 1039, 1096
DdeI	CTNAG	4 cut(s)	837, 996, 1439, 2187
DinI	GGCGCC	1 cut(s)	1286
DrdI	GACNNNNNNGTC	1 cut(s)	926
DseDI	GACNNNNNNGTC	1 cut(s)	926
EaeI	YGGCCR	3 cut(s)	534, 1212, 1495
EagI	CGGCCG	1 cut(s)	1212
Eam1104I	CTCTTC	1 cut(s)	68
EarI	CTCTTC	1 cut(s)	68
EciI	GGCGGA	1 cut(s)	2127
EclXI	CGGCCG	1 cut(s)	1212
Eco130I	CCWWGG	3 cut(s)	891, 1655, 1945
Eco147I	AGGCCT	1 cut(s)	404
Eco24I	GRGCYC	1 cut(s)	547
Eco31I	GGTCTC	2 cut(s)	78, 999
Eco32I	GATATC	1 cut(s)	1276
Eco47I	GGWCC	7 cut(s)	89, 94, 488, 604, 896, 1000, 1078
Eco52I	CGGCCG	1 cut(s)	1212
Eco72I	CACGTG	2 cut(s)	439, 540
Eco88I	CYCGRG	2 cut(s)	990, 1773
Eco91I	GGTNACC	2 cut(s)	469, 1888
EcoO109I	RGGNCCY	1 cut(s)	544
EcoO65I	GGTNACC	2 cut(s)	469, 1888
EcoRII	CCWGG	3 cut(s)	606, 849, 968
EcoRV	GATATC	1 cut(s)	1276
EcoT14I	CCWWGG	3 cut(s)	891, 1655, 1945
EcoT38I	GRGCYC	1 cut(s)	547
EgeI	GGCGCC	1 cut(s)	1286
EheI	GGCGCC	1 cut(s)	1286
ErhI	CCWWGG	3 cut(s)	891, 1655, 1945
Esp3I	CGTCTC	1 cut(s)	2144
FalI	AAGNNNNNCTT	2 cut(s)	128, 160
FaqI	GGGAC	2 cut(s)	474, 1284
FauI	CCCGC	8 cut(s)	240, 249, 393, 555, 967, 1111, 1182, 1916
FbaI	TGATCA	3 cut(s)	855, 1552, 1752
FblI	GTMKAC	3 cut(s)	450, 1935, 2018
Fnu4HI	GCNGC	7 cut(s)	810, 834, 1212, 1362, 1821, 2175, 2184
FokI	GGATG	6 cut(s)	645, 929, 1043, 1127, 1208, 1718
FriOI	GRGCYC	1 cut(s)	547
Fsp4HI	GCNGC	7 cut(s)	810, 834, 1212, 1362, 1821, 2175, 2184
FspBI	CTAG	6 cut(s)	236, 1644, 1680, 1824, 1961, 2082
GlaI	GCGC	5 cut(s)	46, 321, 417, 787, 1286
GluI	GCNGC	7 cut(s)	810, 834, 1212, 1362, 1821, 2175, 2184
GsaI	CCCAGC	1 cut(s)	292
GsuI	CTGGAG	2 cut(s)	359, 539
HaeII	RGCGCY	1 cut(s)	1288
HaeIII	GGCC	7 cut(s)	404, 536, 545, 718, 1214, 1333, 1497
HapII	CCGG	9 cut(s)	48, 87, 92, 347, 486, 498, 629, 1017, 1809
HgaI	GACGC	3 cut(s)	523, 566, 974
HhaI	GCGC	5 cut(s)	47, 322, 418, 788, 1287
Hin1I	GRCGYC	2 cut(s)	966, 1285
Hin6I	GCGC	5 cut(s)	45, 320, 416, 786, 1285
HinP1I	GCGC	5 cut(s)	45, 320, 416, 786, 1285
HincII	GTYRAC	2 cut(s)	451, 732
HindII	GTYRAC	2 cut(s)	451, 732
HindIII	AAGCTT	1 cut(s)	1663
HinfI	GANTC	5 cut(s)	431, 1297, 1618, 1649, 2134
HpaII	CCGG	9 cut(s)	48, 87, 92, 347, 486, 498, 629, 1017, 1809
HphI	GGTGA	9 cut(s)	221, 463, 712, 865, 991, 1283, 1468, 1644, 1961
Hpy99I	CGWCG	7 cut(s)	413, 416, 452, 565, 968, 1220, 1765
HpyAV	CCTTC	4 cut(s)	93, 394, 719, 1696
HpyCH4III	ACNGT	8 cut(s)	250, 448, 475, 641, 700, 736, 910, 2074
HpyCH4IV	ACGT	6 cut(s)	438, 539, 563, 1479, 1533, 1584
HpyCH4V	TGCA	9 cut(s)	108, 122, 129, 478, 676, 1141, 1251, 1268, 1709
HpyF3I	CTNAG	4 cut(s)	837, 996, 1439, 2187
HpySE526I	ACGT	6 cut(s)	438, 539, 563, 1479, 1533, 1584
Hsp92I	GRCGYC	2 cut(s)	966, 1285
HspAI	GCGC	5 cut(s)	45, 320, 416, 786, 1285
KasI	GGCGCC	1 cut(s)	1284
Kpn2I	TCCGGA	1 cut(s)	86
Ksp22I	TGATCA	3 cut(s)	855, 1552, 1752
LmnI	GCTCC	3 cut(s)	327, 343, 744
Lsp1109I	GCAGC	4 cut(s)	1373, 1807, 2161, 2170
LweI	GCATC	5 cut(s)	487, 1078, 1105, 1373, 1696
MabI	ACCWGGT	1 cut(s)	849
MaeI	CTAG	6 cut(s)	236, 1644, 1680, 1824, 1961, 2082
MaeII	ACGT	6 cut(s)	438, 539, 563, 1479, 1533, 1584
MaeIII	GTNAC	5 cut(s)	469, 1178, 1339, 1650, 1888
MbiI	CCGCTC	1 cut(s)	244
MboII	GAAGA	5 cut(s)	10, 55, 289, 1964, 2063
MflI	RGATCY	1 cut(s)	2155
MhlI	GDGCHC	3 cut(s)	131, 547, 741
MlsI	TGGCCA	1 cut(s)	1497
MluCI	AATT	7 cut(s)	940, 947, 1022, 1425, 1600, 1989, 2104
MluNI	TGGCCA	1 cut(s)	1497
Mly113I	GGCGCC	1 cut(s)	1285
MlyI	GAGTC	4 cut(s)	440, 1306, 1658, 2128
MmeI	TCCRAC	2 cut(s)	240, 1414
Mox20I	TGGCCA	1 cut(s)	1497
MroI	TCCGGA	1 cut(s)	86
MroXI	GAANNNNTTC	2 cut(s)	143, 1664
MscI	TGGCCA	1 cut(s)	1497
MseI	TTAA	5 cut(s)	261, 669, 1164, 1428, 1716
MslI	CAYNNNNRTG	1 cut(s)	1451
Msp20I	TGGCCA	1 cut(s)	1497
MspA1I	CMGCKG	3 cut(s)	311, 388, 550
MspI	CCGG	9 cut(s)	48, 87, 92, 347, 486, 498, 629, 1017, 1809
MspR9I	CCNGG	5 cut(s)	608, 630, 851, 970, 1809
MvaI	CCWGG	3 cut(s)	608, 851, 970
MvnI	CGCG	7 cut(s)	320, 416, 418, 560, 788, 833, 1177
NarI	GGCGCC	1 cut(s)	1285
NciI	CCSGG	2 cut(s)	630, 1809
NheI	GCTAGC	2 cut(s)	1823, 2081
NlaIV	GGNNCC	9 cut(s)	345, 490, 545, 546, 897, 1080, 1286, 1784, 1806
NmuCI	GTSAC	3 cut(s)	469, 1339, 1650
PagI	TCATGA	1 cut(s)	1549
PaqCI	CACCTGC	1 cut(s)	1259
PceI	AGGCCT	1 cut(s)	404
PcsI	WCGNNNNNNNCGW	1 cut(s)	444
PdmI	GAANNNNTTC	2 cut(s)	143, 1664
PfeI	GAWTC	1 cut(s)	1618
PflMI	CCANNNNNTGG	1 cut(s)	1192
PinAI	ACCGGT	1 cut(s)	485
PkrI	GCNGC	7 cut(s)	811, 835, 1213, 1363, 1822, 2176, 2185
PleI	GAGTC	4 cut(s)	439, 1305, 1657, 2128
PluTI	GGCGCC	1 cut(s)	1288
PmaCI	CACGTG	2 cut(s)	439, 540
PmlI	CACGTG	2 cut(s)	439, 540
PpsI	GAGTC	4 cut(s)	439, 1305, 1657, 2128
Ppu21I	YACGTR	2 cut(s)	439, 540
Psp1406I	AACGTT	1 cut(s)	1533
Psp6I	CCWGG	3 cut(s)	606, 849, 968
PspCI	CACGTG	2 cut(s)	439, 540
PspEI	GGTNACC	2 cut(s)	469, 1888
PspFI	CCCAGC	1 cut(s)	288
PspGI	CCWGG	3 cut(s)	606, 849, 968
PspN4I	GGNNCC	9 cut(s)	345, 490, 545, 546, 897, 1080, 1286, 1784, 1806
PspOMI	GGGCCC	1 cut(s)	543
PspPI	GGNCC	9 cut(s)	89, 94, 488, 543, 544, 604, 896, 1000, 1078
PsrI	GAACNNNNNNTAC	2 cut(s)	1031, 1063
PsuI	RGATCY	1 cut(s)	2155
RsaI	GTAC	4 cut(s)	638, 830, 1040, 1097
RsaNI	GTAC	4 cut(s)	637, 829, 1039, 1096
RseI	CAYNNNNRTG	1 cut(s)	1451
Rsr2I	CGGWCCG	1 cut(s)	89
RsrII	CGGWCCG	1 cut(s)	89
SalI	GTCGAC	1 cut(s)	449
SaqAI	TTAA	5 cut(s)	261, 669, 1164, 1428, 1716
SatI	GCNGC	7 cut(s)	810, 834, 1212, 1362, 1821, 2175, 2184
Sau96I	GGNCC	9 cut(s)	89, 94, 488, 543, 544, 604, 896, 1000, 1078
SchI	GAGTC	4 cut(s)	440, 1306, 1658, 2128
ScrFI	CCNGG	5 cut(s)	608, 630, 851, 970, 1809
SduI	GDGCHC	3 cut(s)	131, 547, 741
SexAI	ACCWGGT	1 cut(s)	849
SfaNI	GCATC	5 cut(s)	487, 1078, 1105, 1373, 1696
SfcI	CTRYAG	2 cut(s)	823, 2070
SfiI	GGCCNNNNNGGCC	1 cut(s)	542
SfoI	GGCGCC	1 cut(s)	1286
SinI	GGWCC	7 cut(s)	89, 94, 488, 604, 896, 1000, 1078
SmiMI	CAYNNNNRTG	1 cut(s)	1451
Sse9I	AATT	7 cut(s)	940, 947, 1022, 1425, 1600, 1989, 2104
SseBI	AGGCCT	1 cut(s)	404
SspDI	GGCGCC	1 cut(s)	1284
SspMI	CTAG	6 cut(s)	236, 1644, 1680, 1824, 1961, 2082
StuI	AGGCCT	1 cut(s)	404
StyD4I	CCNGG	5 cut(s)	606, 628, 849, 968, 1807
StyI	CCWWGG	3 cut(s)	891, 1655, 1945
TaaI	ACNGT	8 cut(s)	250, 448, 475, 641, 700, 736, 910, 2074
TaiI	ACGT	6 cut(s)	441, 542, 566, 1482, 1536, 1587
TaqI	TCGA	9 cut(s)	102, 333, 450, 582, 723, 1155, 1257, 1763, 1984
TasI	AATT	7 cut(s)	940, 947, 1022, 1425, 1600, 1989, 2104
TatI	WGTACW	1 cut(s)	1038
TauI	GCSGC	3 cut(s)	812, 836, 1214
TfiI	GAWTC	1 cut(s)	1618
Tru1I	TTAA	5 cut(s)	261, 669, 1164, 1428, 1716
Tru9I	TTAA	5 cut(s)	261, 669, 1164, 1428, 1716
TscAI	CASTG	4 cut(s)	683, 1822, 1919, 2079
TseFI	GTSAC	3 cut(s)	469, 1339, 1650
TseI	GCWGC	4 cut(s)	1361, 1820, 2174, 2183
Tsp45I	GTSAC	3 cut(s)	469, 1339, 1650
TspDTI	ATGAA	5 cut(s)	704, 941, 1538, 1559, 2021
TspGWI	ACGGA	8 cut(s)	397, 617, 662, 833, 1233, 1307, 1712, 2168
TspRI	CASTG	4 cut(s)	683, 1822, 1919, 2079
Van91I	CCANNNNNTGG	1 cut(s)	1192
VneI	GTGCAC	1 cut(s)	127
VpaK11BI	GGWCC	7 cut(s)	89, 94, 488, 604, 896, 1000, 1078
XapI	RAATTY	2 cut(s)	947, 2104
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1193, 1309
XmiI	GTMKAC	3 cut(s)	450, 1935, 2018
XmnI	GAANNNNTTC	2 cut(s)	143, 1664
XspI	CTAG	6 cut(s)	236, 1644, 1680, 1824, 1961, 2082

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.