Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0002010

Physical Location & Seq

Genomic Coordinates Forward (+)

18096046 .. 18097245

Gene Structure 1200 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG203600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1200 bp

ATGGAAACCCGAAACTTCTTCAGCCTTTTCTTTCTTTCGCTCTGCGTCGGATTTGTCCTCCTCTTCACTTGGGGTCACCTCCCTTACGCGCCTCCCTACACGACTGACCTTCTCGACTGCACCACCAACTCAGCATGGTGCGCCTCCAAAAACCGCTCTCAGTCCAAACCGTCCAGCAACCTCCTCAAAAACAAAAACCACCGCAGCCACAACCACGCCTCCGACATTCCCCACCACCCTCTCGATCCCCTCACAGTCCAAGAACTCAACAAAATCCGAACCATCCTCTCCTCCCACGCGCTCTTCAAGTCGTCCTCAGCCTACGCGCTCCACTCCATCGAGCTCGAAGAGCCCGACAAGCCTTTCGTCCTCCGATGGAAAAAGGGCGACCCACTGCTACCCAGAAAGGCCTCCGTCATCGCACGTGCCGCCGGGAAGGCGCGCGTGCTGACCGTTGACCTGGCTACGAGCGAGGTGTCCGTACAGCAGACCGGAACCCACTTCGGCTATCCGATGCTGACCATGGAGGAAATAACCGCCGCGATCTGGGTCCCACTTTCGAACGCCAAGTTCAACCGTACGATCATCCAGCGCGGCGTTGATCTGGCGGACCTTGCGTGTTTGCCGATCTCGTCGGGGTGGTTCGATGAGTACGAGGAGAACAGGAGGAGGTTGATTAAGGTACAGTGCTTCTCCACGAAGGACACTGTGAACTTTTACATGAGGCCAATCGAAGGGTTGACCGTTCTCGTTGACTTGGACGCCGAACAAGTGGTGGAGATTTCCGACAAGGGCGGGAACATTCCGATACCGAAGGCCGCCAACACAGACTATAGATACTCCGCCAGCCAGGAGGTCAGTCGAGTGATCAAGCTAGTGAATCCCATTTCCATTGAGCAACCAGAAGGTCCAAGTTTTACCGTGGAGGACGGTCACTTAGTAAAATGGGCAAATTGGGAATTTCATGTAAAAGCCGACGCCAGAGCCGGCGTGATCATATCTCAAGCTAGGGTCCGTGACCCAGATACCGGTGACCAAAGGGACGTGATGTACAAAGGGTTTCCGTCGGAGCTGTTTGTGCCTTACATGGACCCCACGGATGCATGGTACTTCAAGACTTATATGGATGCGGGCGAATACGGGTTCGGGTTGCAGGCCATGCCGCTCGACCCGCTTAATGATTGCCCCCGTAACGCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0001505 GO:0006807 GO:0006809 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009987 GO:0010033 GO:0017144 GO:0023052 GO:0032870 GO:0033993 GO:0034641 GO:0042133 GO:0042136 GO:0042221 GO:0044237 GO:0044249 GO:0044271 GO:0046209 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0065008 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0072593 GO:0097305 GO:0097306 GO:1901700 GO:1901701 GO:1903409 GO:2001057

KEGG Pathways

Metabolic & Signaling

ko00260 ko00350 ko00360 ko00410 ko00950 ko00960 ko01100 ko01110 map00260 map00350 map00360 map00410 map00950 map00960 map01100 map01110

Pfam Domains

Protein Families

Cu_amine_oxid Cu_amine_oxidN2 Cu_amine_oxidN3

Protein Analysis

399

Amino Acids

44.93

Weight (kDa)

6.14

Isoelectric Point (pI)

42.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu_amine_oxidN2	PF02727	79 - 160	4.6e-23	Copper amine oxidase, N2 domain
Cu_amine_oxidN3	PF02728	171 - 271	3.8e-24	Copper amine oxidase, N3 domain
Cu_amine_oxid	PF01179	297 - 399	1.2e-29	Copper amine oxidase, enzyme domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002010)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G12270 AT4G12280 AT4G12290 AT4G12290
fragaria_vesca	FvH4_5g00610 FvH4_5g00610 FvH4_5g00610 FvH4_5g00610 FvH4_5g00610
malus_domestica	MD02G1257400.v1.1 MD06G1075500.v1.1 MD16G1192400.v1.1
prunus_persica	Prupe.5G078700_v2.0.a1 Prupe.5G078900_v2.0.a1
pyrus_communis	pycom09g07970 pycom13g04890 pycom15g15380 pycom15g15390
rosa_chinensis	RchiOBHm_Chr5g0060271 RchiOBHm_Chr7g0201651 RchiOBHm_Chr7g0201661
rosa_laevigata	RLG00000003658
rosa_multiflora	Rmu_sc0001512.1_g000015 Rmu_sc0004811.1_g000006 Rmu_sc0004811.1_g000008 Rmu_sc0004811.1_g000009 Rmu_sc0004811.1_g000010 Rmu_sc0004811.1_g000011
rosa_roxburghii	Rroxscaffold_3G00255130 Rroxscaffold_3G00255140 Rroxscaffold_3G00255150 Rroxscaffold_6G00396720
rosa_rugosa	Rorug07G0065300 Rorug07G0065300
rosa_samantha	Rh7AG192300 Rh7AG192500 Rh7BG194400 Rh7BG194500 Rh7BG194600 Rh7CG203500 Rh7CG203600 Rh7CG203700 Rh7DG197700
rosa_wichuraiana	Rw7G016860 Rw7G016870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	2 cut(s)	156, 1165
AccII	CGCG	7 cut(s)	89, 299, 326, 442, 444, 542, 594
AclWI	GGATC	1 cut(s)	239
AcsI	RAATTY	1 cut(s)	959
AcuI	CTGAAG	1 cut(s)	4
AcvI	CACGTG	1 cut(s)	425
AcyI	GRCGYC	2 cut(s)	762, 978
AfaI	GTAC	6 cut(s)	483, 580, 653, 684, 1052, 1109
AfiI	CCNNNNNNNGG	3 cut(s)	546, 734, 1028
AgeI	ACCGGT	1 cut(s)	1028
AgsI	TTSAA	3 cut(s)	307, 574, 1114
AjiI	CACGTC	1 cut(s)	1045
AjnI	CCWGG	2 cut(s)	459, 849
AluBI	AGCT	4 cut(s)	343, 874, 1007, 1072
AluI	AGCT	4 cut(s)	343, 874, 1007, 1072
Alw21I	GWGCWC	1 cut(s)	345
AlwI	GGATC	1 cut(s)	239
AoxI	GGCC	4 cut(s)	408, 725, 816, 1155
ApeKI	GCWGC	1 cut(s)	204
ApoI	RAATTY	1 cut(s)	959
ArsI	GACNNNNNNTTYG	2 cut(s)	347, 379
AsiGI	ACCGGT	1 cut(s)	1028
AspLEI	GCGC	7 cut(s)	91, 143, 301, 328, 442, 444, 594
AspS9I	GGNCC	5 cut(s)	550, 610, 908, 1012, 1090
AsuC2I	CCSGG	1 cut(s)	433
AsuHPI	GGTGA	2 cut(s)	68, 1043
AsuII	TTCGAA	1 cut(s)	560
AvaII	GGWCC	5 cut(s)	550, 610, 908, 1012, 1090
BanII	GRGCYC	2 cut(s)	345, 354
BbrPI	CACGTG	1 cut(s)	425
Bbv12I	GWGCWC	1 cut(s)	345
BbvCI	CCTCAGC	1 cut(s)	316
BbvI	GCAGC	1 cut(s)	216
BccI	CCATC	3 cut(s)	290, 344, 369
BciT130I	CCWGG	2 cut(s)	461, 851
BclI	TGATCA	2 cut(s)	867, 993
BcnI	CCSGG	1 cut(s)	433
BfaI	CTAG	3 cut(s)	875, 1008, 1198
BfmI	CTRYAG	1 cut(s)	832
BglI	GCCNNNNNGGC	1 cut(s)	437
BisI	GCNGC	6 cut(s)	205, 429, 540, 595, 819, 1163
BlsI	GCNGC	6 cut(s)	206, 430, 541, 596, 820, 1164
Bme1390I	CCNGG	3 cut(s)	433, 461, 851
Bme18I	GGWCC	5 cut(s)	550, 610, 908, 1012, 1090
BmgBI	CACGTC	1 cut(s)	1045
BmgT120I	GGNCC	5 cut(s)	550, 610, 908, 1012, 1090
BmiI	GGNNCC	5 cut(s)	496, 551, 552, 1013, 1092
BmrFI	CCNGG	3 cut(s)	433, 461, 851
BmsI	GCATC	3 cut(s)	504, 1090, 1117
Bpu10I	CCTNAGC	1 cut(s)	316
Bpu14I	TTCGAA	1 cut(s)	560
BpuEI	CTTGAG	1 cut(s)	987
BpuMI	CCSGG	1 cut(s)	433
BsaAI	YACGTR	1 cut(s)	425
BsaHI	GRCGYC	2 cut(s)	762, 978
BsaJI	CCNNGG	3 cut(s)	522, 921, 1095
BsaWI	WCCGGW	2 cut(s)	491, 1028
BsaXI	ACNNNNNCTCC	2 cut(s)	203, 233
Bsc4I	CCNNNNNNNGG	3 cut(s)	546, 734, 1028
Bse118I	RCCGGY	2 cut(s)	986, 1028
BseBI	CCWGG	2 cut(s)	461, 851
BseDI	CCNNGG	3 cut(s)	522, 921, 1095
BseGI	GGATG	4 cut(s)	282, 585, 1105, 1132
BseLI	CCNNNNNNNGG	3 cut(s)	546, 734, 1028
BseMII	CTCAG	3 cut(s)	144, 173, 330
BsePI	GCGCGC	1 cut(s)	440
BseRI	GAGGAG	5 cut(s)	50, 173, 280, 671, 682
BseXI	GCAGC	1 cut(s)	216
BsgI	GTGCAG	1 cut(s)	103
Bsh1236I	CGCG	7 cut(s)	89, 299, 326, 442, 444, 542, 594
BshFI	GGCC	4 cut(s)	410, 727, 818, 1157
BshTI	ACCGGT	1 cut(s)	1028
BsiHKAI	GWGCWC	1 cut(s)	345
BsiSI	CCGG	4 cut(s)	432, 492, 987, 1029
BsiWI	CGTACG	1 cut(s)	578
BslFI	GGGAC	2 cut(s)	536, 1055
BslI	CCNNNNNNNGG	3 cut(s)	546, 734, 1028
BsmFI	GGGAC	2 cut(s)	536, 1055
BsnI	GGCC	4 cut(s)	410, 727, 818, 1157
Bsp119I	TTCGAA	1 cut(s)	560
Bsp1286I	GDGCHC	2 cut(s)	345, 354
Bsp1407I	TGTACA	1 cut(s)	1050
Bsp143I	GATC	7 cut(s)	244, 543, 582, 601, 627, 867, 993
Bsp19I	CCATGG	1 cut(s)	522
BspANI	GGCC	4 cut(s)	410, 727, 818, 1157
BspCNI	CTCAG	3 cut(s)	143, 172, 329
BspFNI	CGCG	7 cut(s)	89, 299, 326, 442, 444, 542, 594
BspLI	GGNNCC	5 cut(s)	496, 551, 552, 1013, 1092
BspPI	GGATC	1 cut(s)	239
BspQI	GCTCTTC	2 cut(s)	308, 342
BspT104I	TTCGAA	1 cut(s)	560
BsrBI	CCGCTC	2 cut(s)	156, 1165
BsrFI	RCCGGY	2 cut(s)	986, 1028
BsrGI	TGTACA	1 cut(s)	1050
BssAI	RCCGGY	2 cut(s)	986, 1028
BssECI	CCNNGG	3 cut(s)	522, 921, 1095
BssHII	GCGCGC	1 cut(s)	440
BssMI	GATC	7 cut(s)	244, 543, 582, 601, 627, 867, 993
BssNI	GRCGYC	2 cut(s)	762, 978
BssT1I	CCWWGG	1 cut(s)	522
Bst2UI	CCWGG	2 cut(s)	461, 851
Bst4CI	ACNGT	9 cut(s)	171, 256, 454, 578, 687, 709, 745, 922, 932
Bst6I	CTCTTC	3 cut(s)	68, 308, 342
BstACI	GRCGYC	2 cut(s)	762, 978
BstAPI	GCANNNNNTGC	1 cut(s)	1159
BstAUI	TGTACA	1 cut(s)	1050
BstBAI	YACGTR	1 cut(s)	425
BstBI	TTCGAA	1 cut(s)	560
BstC8I	GCNNGC	6 cut(s)	442, 446, 847, 988, 1132, 1155
BstDEI	CTNAG	4 cut(s)	130, 159, 316, 937
BstDSI	CCRYGG	3 cut(s)	522, 921, 1095
BstEII	GGTNACC	2 cut(s)	74, 1031
BstF5I	GGATG	4 cut(s)	282, 585, 1105, 1132
BstFNI	CGCG	7 cut(s)	89, 299, 326, 442, 444, 542, 594
BstHHI	GCGC	7 cut(s)	91, 143, 301, 328, 442, 444, 594
BstKTI	GATC	7 cut(s)	247, 546, 585, 604, 630, 870, 996
BstMBI	GATC	7 cut(s)	244, 543, 582, 601, 627, 867, 993
BstMWI	GCNNNNNNNGC	9 cut(s)	140, 349, 358, 428, 437, 614, 1078, 1159, 1171
BstNI	CCWGG	2 cut(s)	461, 851
BstPI	GGTNACC	2 cut(s)	74, 1031
BstSCI	CCNGG	3 cut(s)	431, 459, 849
BstSFI	CTRYAG	1 cut(s)	832
BstUI	CGCG	7 cut(s)	89, 299, 326, 442, 444, 542, 594
BstV1I	GCAGC	1 cut(s)	216
BsuRI	GGCC	4 cut(s)	410, 727, 818, 1157
BtgI	CCRYGG	3 cut(s)	522, 921, 1095
BtgZI	GCGATG	1 cut(s)	403
BtrI	CACGTC	1 cut(s)	1045
BtsCI	GGATG	4 cut(s)	282, 585, 1105, 1132
BtsI	GCAGTG	1 cut(s)	392
BtsIMutI	CAGTG	3 cut(s)	392, 692, 705
Cac8I	GCNNGC	6 cut(s)	442, 446, 847, 988, 1132, 1155
CfoI	GCGC	7 cut(s)	91, 143, 301, 328, 442, 444, 594
Cfr10I	RCCGGY	2 cut(s)	986, 1028
Cfr13I	GGNCC	5 cut(s)	550, 610, 908, 1012, 1090
CseI	GACGC	3 cut(s)	34, 770, 986
Csp6I	GTAC	6 cut(s)	482, 579, 652, 683, 1051, 1108
CspAI	ACCGGT	1 cut(s)	1028
CviAII	CATG	7 cut(s)	135, 523, 721, 965, 1087, 1104, 1159
CviQI	GTAC	6 cut(s)	482, 579, 652, 683, 1051, 1108
DdeI	CTNAG	4 cut(s)	130, 159, 316, 937
DpnI	GATC	7 cut(s)	246, 545, 584, 603, 629, 869, 995
DpnII	GATC	7 cut(s)	244, 543, 582, 601, 627, 867, 993
Eam1104I	CTCTTC	3 cut(s)	68, 308, 342
EarI	CTCTTC	3 cut(s)	68, 308, 342
EciI	GGCGGA	2 cut(s)	623, 832
Ecl136II	GAGCTC	1 cut(s)	343
Eco130I	CCWWGG	1 cut(s)	522
Eco147I	AGGCCT	1 cut(s)	410
Eco24I	GRGCYC	2 cut(s)	345, 354
Eco47I	GGWCC	5 cut(s)	550, 610, 908, 1012, 1090
Eco53kI	GAGCTC	1 cut(s)	343
Eco57I	CTGAAG	1 cut(s)	4
Eco72I	CACGTG	1 cut(s)	425
Eco91I	GGTNACC	2 cut(s)	74, 1031
EcoICRI	GAGCTC	1 cut(s)	343
EcoO109I	RGGNCCY	1 cut(s)	550
EcoO65I	GGTNACC	2 cut(s)	74, 1031
EcoRII	CCWGG	2 cut(s)	459, 849
EcoT14I	CCWWGG	1 cut(s)	522
EcoT22I	ATGCAT	1 cut(s)	1105
EcoT38I	GRGCYC	2 cut(s)	345, 354
ErhI	CCWWGG	1 cut(s)	522
FaeI	CATG	7 cut(s)	138, 526, 724, 968, 1090, 1107, 1162
FaqI	GGGAC	2 cut(s)	536, 1055
FatI	CATG	7 cut(s)	134, 522, 720, 964, 1086, 1103, 1158
FauI	CCCGC	3 cut(s)	788, 1123, 1179
FbaI	TGATCA	2 cut(s)	867, 993
Fnu4HI	GCNGC	6 cut(s)	205, 429, 540, 595, 819, 1163
FokI	GGATG	4 cut(s)	269, 572, 1112, 1139
FriOI	GRGCYC	2 cut(s)	345, 354
Fsp4HI	GCNGC	6 cut(s)	205, 429, 540, 595, 819, 1163
FspBI	CTAG	3 cut(s)	875, 1008, 1198
GlaI	GCGC	7 cut(s)	90, 142, 300, 327, 441, 443, 593
GluI	GCNGC	6 cut(s)	205, 429, 540, 595, 819, 1163
HaeIII	GGCC	4 cut(s)	410, 727, 818, 1157
HapII	CCGG	4 cut(s)	432, 492, 987, 1029
HgaI	GACGC	3 cut(s)	34, 770, 986
HhaI	GCGC	7 cut(s)	91, 143, 301, 328, 442, 444, 594
Hin1I	GRCGYC	2 cut(s)	762, 978
Hin1II	CATG	7 cut(s)	138, 526, 724, 968, 1090, 1107, 1162
Hin6I	GCGC	7 cut(s)	89, 141, 299, 326, 440, 442, 592
HinP1I	GCGC	7 cut(s)	89, 141, 299, 326, 440, 442, 592
HincII	GTYRAC	3 cut(s)	457, 741, 754
HindII	GTYRAC	3 cut(s)	457, 741, 754
HinfI	GANTC	1 cut(s)	880
HpaII	CCGG	4 cut(s)	432, 492, 987, 1029
HphI	GGTGA	2 cut(s)	68, 1043
Hpy166II	GTNNAC	4 cut(s)	457, 712, 741, 754
Hpy188I	TCNGA	8 cut(s)	50, 223, 278, 374, 513, 787, 807, 1069
Hpy188III	TCNNGA	3 cut(s)	113, 242, 1114
Hpy8I	GTNNAC	4 cut(s)	457, 712, 741, 754
Hpy99I	CGWCG	4 cut(s)	50, 637, 980, 1069
HpyAV	CCTTC	6 cut(s)	119, 430, 694, 728, 808, 899
HpyCH4III	ACNGT	9 cut(s)	171, 256, 454, 578, 687, 709, 745, 922, 932
HpyCH4IV	ACGT	2 cut(s)	424, 1044
HpyCH4V	TGCA	3 cut(s)	120, 1103, 1153
HpyF10VI	GCNNNNNNNGC	9 cut(s)	140, 349, 358, 428, 437, 614, 1078, 1159, 1171
HpyF3I	CTNAG	4 cut(s)	130, 159, 316, 937
HpySE526I	ACGT	2 cut(s)	424, 1044
Hsp92I	GRCGYC	2 cut(s)	762, 978
Hsp92II	CATG	7 cut(s)	138, 526, 724, 968, 1090, 1107, 1162
HspAI	GCGC	7 cut(s)	89, 141, 299, 326, 440, 442, 592
KflI	GGGWCCC	1 cut(s)	550
KroI	GCCGGC	1 cut(s)	986
KroNI	GCCGGC	1 cut(s)	988
Ksp22I	TGATCA	2 cut(s)	867, 993
Kzo9I	GATC	7 cut(s)	244, 543, 582, 601, 627, 867, 993
LguI	GCTCTTC	2 cut(s)	308, 342
LmnI	GCTCC	2 cut(s)	333, 1069
Lsp1109I	GCAGC	1 cut(s)	216
LweI	GCATC	3 cut(s)	504, 1090, 1117
MaeI	CTAG	3 cut(s)	875, 1008, 1198
MaeII	ACGT	2 cut(s)	424, 1044
MaeIII	GTNAC	5 cut(s)	74, 932, 1016, 1031, 1190
MalI	GATC	7 cut(s)	246, 545, 584, 603, 629, 869, 995
MbiI	CCGCTC	2 cut(s)	156, 1165
MboI	GATC	7 cut(s)	244, 543, 582, 601, 627, 867, 993
MboII	GAAGA	4 cut(s)	10, 55, 295, 359
MhlI	GDGCHC	2 cut(s)	345, 354
MluCI	AATT	2 cut(s)	952, 959
MmeI	TCCRAC	4 cut(s)	28, 246, 810, 1047
Mph1103I	ATGCAT	1 cut(s)	1105
MroNI	GCCGGC	1 cut(s)	986
MseI	TTAA	2 cut(s)	678, 1176
MspI	CCGG	4 cut(s)	432, 492, 987, 1029
MspR9I	CCNGG	3 cut(s)	433, 461, 851
MvaI	CCWGG	2 cut(s)	461, 851
MvnI	CGCG	7 cut(s)	89, 299, 326, 442, 444, 542, 594
MwoI	GCNNNNNNNGC	9 cut(s)	140, 349, 358, 428, 437, 614, 1078, 1159, 1171
NaeI	GCCGGC	1 cut(s)	988
NciI	CCSGG	1 cut(s)	433
NcoI	CCATGG	1 cut(s)	522
NdeII	GATC	7 cut(s)	244, 543, 582, 601, 627, 867, 993
NgoMIV	GCCGGC	1 cut(s)	986
NlaIII	CATG	7 cut(s)	138, 526, 724, 968, 1090, 1107, 1162
NlaIV	GGNNCC	5 cut(s)	496, 551, 552, 1013, 1092
NmuCI	GTSAC	4 cut(s)	74, 932, 1016, 1031
NsiI	ATGCAT	1 cut(s)	1105
NspV	TTCGAA	1 cut(s)	560
PauI	GCGCGC	1 cut(s)	440
PceI	AGGCCT	1 cut(s)	410
PciSI	GCTCTTC	2 cut(s)	308, 342
PcsI	WCGNNNNNNNCGW	2 cut(s)	351, 651
PdiI	GCCGGC	1 cut(s)	988
PfeI	GAWTC	1 cut(s)	880
Pfl23II	CGTACG	1 cut(s)	578
PinAI	ACCGGT	1 cut(s)	1028
PkrI	GCNGC	6 cut(s)	206, 430, 541, 596, 820, 1164
PmaCI	CACGTG	1 cut(s)	425
PmlI	CACGTG	1 cut(s)	425
Ppu21I	YACGTR	1 cut(s)	425
PpuMI	RGGWCCY	1 cut(s)	550
Psp124BI	GAGCTC	1 cut(s)	345
Psp5II	RGGWCCY	1 cut(s)	550
Psp6I	CCWGG	2 cut(s)	459, 849
PspCI	CACGTG	1 cut(s)	425
PspEI	GGTNACC	2 cut(s)	74, 1031
PspGI	CCWGG	2 cut(s)	459, 849
PspLI	CGTACG	1 cut(s)	578
PspN4I	GGNNCC	5 cut(s)	496, 551, 552, 1013, 1092
PspPI	GGNCC	5 cut(s)	550, 610, 908, 1012, 1090
PspPPI	RGGWCCY	1 cut(s)	550
PteI	GCGCGC	1 cut(s)	440
RsaI	GTAC	6 cut(s)	483, 580, 653, 684, 1052, 1109
RsaNI	GTAC	6 cut(s)	482, 579, 652, 683, 1051, 1108
SacI	GAGCTC	1 cut(s)	345
SapI	GCTCTTC	2 cut(s)	308, 342
SaqAI	TTAA	2 cut(s)	678, 1176
SatI	GCNGC	6 cut(s)	205, 429, 540, 595, 819, 1163
Sau3AI	GATC	7 cut(s)	244, 543, 582, 601, 627, 867, 993
Sau96I	GGNCC	5 cut(s)	550, 610, 908, 1012, 1090
ScrFI	CCNGG	3 cut(s)	433, 461, 851
SduI	GDGCHC	2 cut(s)	345, 354
SfaNI	GCATC	3 cut(s)	504, 1090, 1117
SfcI	CTRYAG	1 cut(s)	832
SfuI	TTCGAA	1 cut(s)	560
SinI	GGWCC	5 cut(s)	550, 610, 908, 1012, 1090
SmlI	CTYRAG	1 cut(s)	1002
SmoI	CTYRAG	1 cut(s)	1002
Sse9I	AATT	2 cut(s)	952, 959
SseBI	AGGCCT	1 cut(s)	410
SspMI	CTAG	3 cut(s)	875, 1008, 1198
SstI	GAGCTC	1 cut(s)	345
StuI	AGGCCT	1 cut(s)	410
StyD4I	CCNGG	3 cut(s)	431, 459, 849
StyI	CCWWGG	1 cut(s)	522
TaaI	ACNGT	9 cut(s)	171, 256, 454, 578, 687, 709, 745, 922, 932
TaiI	ACGT	2 cut(s)	427, 1047
TaqI	TCGA	9 cut(s)	114, 243, 339, 345, 560, 645, 732, 862, 1167
TasI	AATT	2 cut(s)	952, 959
TatI	WGTACW	1 cut(s)	1050
TauI	GCSGC	5 cut(s)	431, 542, 597, 821, 1165
TfiI	GAWTC	1 cut(s)	880
Tru1I	TTAA	2 cut(s)	678, 1176
Tru9I	TTAA	2 cut(s)	678, 1176
TscAI	CASTG	3 cut(s)	399, 692, 712
TseFI	GTSAC	4 cut(s)	74, 932, 1016, 1031
TseI	GCWGC	1 cut(s)	204
Tsp45I	GTSAC	4 cut(s)	74, 932, 1016, 1031
TspDTI	ATGAA	1 cut(s)	953
TspGWI	ACGGA	5 cut(s)	403, 469, 1004, 1053, 1112
TspRI	CASTG	3 cut(s)	399, 692, 712
VpaK11BI	GGWCC	5 cut(s)	550, 610, 908, 1012, 1090
XapI	RAATTY	1 cut(s)	959
XspI	CTAG	3 cut(s)	875, 1008, 1198
Zsp2I	ATGCAT	1 cut(s)	1105

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.