Rh7BG194600

Primary amine

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0002010
Physical Location & Seq
Forward (+)
15833342 .. 15835262
1921 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG194600.1

Sequence Viewer

Length: 1155 bp
ATGTACAAAGGGTTTCCGTCGGAGCTTTTTGTGCCTTACATGGACCCCACGGATGCATGGTACTTCAAGACTTATATGGATGCGGGCGAATACGGGTTCGGGTTGCAGGCCATGCCGCTCGACCCGCTTAATGATTGCCCCCGTAACGCCTACTACATTGATGGTGTGTTTGCCACATCCGATGGAACGCCGTACGTCCGGTCAAACATGATCTGCGTGTTCGAGAGCTATGGCGGGGATATCGGGTGGCGCCACACGGAGAGTCCGATAACGGGGATGGAGGTGAGAGAAGTGAGGCCAAAGGTGACACTAGTGGTTAGAATGGCAGCCTCAGTTGGTAACTACGACTATATCGTGGACTGGGAGTTCCAAACAGACGGATTAATCAGAGTAAAGGTTGGACTTAGTGGTATTTTGATGGTGAAAGGCACACCCTATGAGAACATGAACAAAGTCTTTGACCTAGACAATCTCCACGGCACACTGTTATCTGAAAACGTTGTTGGAGTTATTCATGACCATTACGTAACATTTCATCTTGATATGGATGTAGACGGTTCTGAAAATTCCTTTGTTAAAGTGAATCTCCAAAGGCAGAAAACCTCTCTTGATGAGTCCCCAAGGAAAAGCTTCTTGAAAGCAACTAGAACTGTGGCCAAAACGGAGAAGGATGCACAAGTTAAGCTAAAACTCTATGACCCGTCGGAGTTCCATGTGATCAACCCGTCGAAACAGACCCGGGTTGGGAACCCTGTCGGGTATAAGGTGGTTCCTGGTGCCACTGCTGCTAGTTTGCTTGATCCTGAAGACCCTCCCCAAAAGAGGGCTGCTTTTACGAATAACCAAATCTGGGTCACTCAATACAATCGGAGTGAGCAGTGGGCAGGTGGGTTGTTTGCTTACCAAAGCCATGGAGAAGATACTTTGGCCATGTGGTCTGACAAGGATCGAGAAATTGAGAATAAAGACATTGTGGTTTGGTACACATTAGGGTTTCATCATATACCATGCCAAGAAGACTTTCCTGTAATGCCGACGGTGTCATCTAGCTTTGATTTGAAGCCTGTGAATTTCTTTCAGAGCAACCCCATACTCCGGACTCCGCCTAATGTTGAGAGCGATTTGCCTGTTTGCTCACCTGTTGCTTCAACTTAG

Protein Analysis

384

Amino Acids

43.32

Weight (kDa)

5.1

Isoelectric Point (pI)

41.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu_amine_oxid PF01179 1 - 364 1.9e-123 Copper amine oxidase, enzyme domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 875
Acc36I ACCTGC 1 cut(s) 875
AccB1I GGYRCC 2 cut(s) 249, 776
AccBSI CCGCTC 1 cut(s) 118
AccI GTMKAC 1 cut(s) 552
AccIII TCCGGA 1 cut(s) 1095
AciI CCGC 5 cut(s) 83, 116, 125, 234, 1103
AclI AACGTT 1 cut(s) 498
AclWI GGATC 2 cut(s) 794, 954
AcoI YGGCCR 2 cut(s) 654, 927
AcsI RAATTY 2 cut(s) 565, 1069
AcuI CTGAAG 1 cut(s) 825
AcyI GRCGYC 1 cut(s) 250
AfaI GTAC 4 cut(s) 5, 62, 194, 983
AfiI CCNNNNNNNGG 6 cut(s) 272, 744, 822, 823, 850, 1095
AgsI TTSAA 4 cut(s) 67, 637, 1060, 1149
AhlI ACTAGT 1 cut(s) 310
AjnI CCWGG 1 cut(s) 772
AjuI GAANNNNNNNTTGG 4 cut(s) 486, 518, 1005, 1037
AloI GAACNNNNNNTCC 2 cut(s) 350, 382
AluBI AGCT 5 cut(s) 25, 228, 630, 685, 1050
AluI AGCT 5 cut(s) 25, 228, 630, 685, 1050
AlwI GGATC 2 cut(s) 794, 954
Ama87I CYCGRG 1 cut(s) 738
Aor13HI TCCGGA 1 cut(s) 1095
AoxI GGCC 4 cut(s) 108, 296, 654, 927
ApeKI GCWGC 3 cut(s) 326, 785, 827
ApoI RAATTY 2 cut(s) 565, 1069
AseI ATTAAT 1 cut(s) 383
Asp700I GAANNNNTTC 2 cut(s) 629, 1020
AspLEI GCGC 1 cut(s) 252
AspS9I GGNCC 1 cut(s) 43
AsuC2I CCSGG 2 cut(s) 739, 740
AsuHPI GGTGA 4 cut(s) 295, 316, 433, 1128
AvaI CYCGRG 1 cut(s) 738
AvaII GGWCC 1 cut(s) 43
BalI TGGCCA 2 cut(s) 656, 929
BanI GGYRCC 2 cut(s) 249, 776
BbsI GAAGAC 2 cut(s) 813, 1023
BbvI GCAGC 3 cut(s) 338, 772, 814
BccI CCATC 4 cut(s) 155, 176, 271, 412
BceAI ACGGC 2 cut(s) 175, 493
BciT130I CCWGG 1 cut(s) 774
BclI TGATCA 1 cut(s) 717
BcnI CCSGG 2 cut(s) 739, 740
BcuI ACTAGT 1 cut(s) 310
BfaI CTAG 5 cut(s) 311, 464, 645, 789, 1047
BfoI RGCGCY 1 cut(s) 253
BfuAI ACCTGC 1 cut(s) 875
BisI GCNGC 4 cut(s) 116, 327, 786, 828
BlsI GCNGC 4 cut(s) 117, 328, 787, 829
Bme1390I CCNGG 3 cut(s) 739, 740, 774
Bme18I GGWCC 1 cut(s) 43
BmeT110I CYCGRG 1 cut(s) 738
BmgT120I GGNCC 1 cut(s) 43
BmiI GGNNCC 5 cut(s) 45, 251, 749, 771, 778
BmrFI CCNGG 3 cut(s) 739, 740, 774
BmrI ACTGGG 1 cut(s) 370
BmsI GCATC 3 cut(s) 43, 70, 661
BmuI ACTGGG 1 cut(s) 370
BpiI GAAGAC 2 cut(s) 813, 1023
BpuMI CCSGG 2 cut(s) 739, 740
BsaAI YACGTR 1 cut(s) 526
BsaHI GRCGYC 1 cut(s) 250
BsaJI CCNNGG 5 cut(s) 48, 475, 620, 738, 910
BsaWI WCCGGW 2 cut(s) 198, 1095
Bsc4I CCNNNNNNNGG 6 cut(s) 272, 744, 822, 823, 850, 1095
Bse1I ACTGG 1 cut(s) 365
BseAI TCCGGA 1 cut(s) 1095
BseBI CCWGG 1 cut(s) 774
BseDI CCNNGG 5 cut(s) 48, 475, 620, 738, 910
BseGI GGATG 6 cut(s) 58, 85, 176, 282, 553, 676
BseLI CCNNNNNNNGG 6 cut(s) 272, 744, 822, 823, 850, 1095
BseMII CTCAG 1 cut(s) 345
BseNI ACTGG 1 cut(s) 365
BseXI GCAGC 3 cut(s) 338, 772, 814
BshFI GGCC 4 cut(s) 110, 298, 656, 929
BshNI GGYRCC 2 cut(s) 249, 776
BsiHKCI CYCGRG 1 cut(s) 738
BsiSI CCGG 3 cut(s) 199, 739, 1096
BsiWI CGTACG 1 cut(s) 192
BslFI GGGAC 1 cut(s) 601
BslI CCNNNNNNNGG 6 cut(s) 272, 744, 822, 823, 850, 1095
BsmFI GGGAC 1 cut(s) 601
BsnI GGCC 4 cut(s) 110, 298, 656, 929
BsoBI CYCGRG 1 cut(s) 738
Bsp13I TCCGGA 1 cut(s) 1095
Bsp1407I TGTACA 1 cut(s) 3
Bsp143I GATC 4 cut(s) 210, 717, 799, 946
Bsp19I CCATGG 1 cut(s) 910
BspACI CCGC 5 cut(s) 83, 116, 125, 234, 1103
BspANI GGCC 4 cut(s) 110, 298, 656, 929
BspCNI CTCAG 1 cut(s) 344
BspEI TCCGGA 1 cut(s) 1095
BspHI TCATGA 1 cut(s) 514
BspLI GGNNCC 5 cut(s) 45, 251, 749, 771, 778
BspMI ACCTGC 1 cut(s) 875
BspPI GGATC 2 cut(s) 794, 954
BspT107I GGYRCC 2 cut(s) 249, 776
BsrBI CCGCTC 1 cut(s) 118
BsrGI TGTACA 1 cut(s) 3
BsrI ACTGG 1 cut(s) 365
BssECI CCNNGG 5 cut(s) 48, 475, 620, 738, 910
BssMI GATC 4 cut(s) 210, 717, 799, 946
BssNI GRCGYC 1 cut(s) 250
BssT1I CCWWGG 2 cut(s) 620, 910
Bst2UI CCWGG 1 cut(s) 774
Bst4CI ACNGT 4 cut(s) 486, 557, 652, 1039
BstACI GRCGYC 1 cut(s) 250
BstAPI GCANNNNNTGC 1 cut(s) 112
BstAUI TGTACA 1 cut(s) 3
BstBAI YACGTR 1 cut(s) 526
BstC8I GCNNGC 2 cut(s) 85, 108
BstDEI CTNAG 3 cut(s) 331, 404, 1152
BstDSI CCRYGG 3 cut(s) 48, 475, 910
BstF5I GGATG 6 cut(s) 58, 85, 176, 282, 553, 676
BstH2I RGCGCY 1 cut(s) 253
BstHHI GCGC 1 cut(s) 252
BstKTI GATC 4 cut(s) 213, 720, 802, 949
BstMBI GATC 4 cut(s) 210, 717, 799, 946
BstMWI GCNNNNNNNGC 4 cut(s) 31, 112, 124, 785
BstNI CCWGG 1 cut(s) 774
BstSCI CCNGG 3 cut(s) 737, 738, 772
BstSNI TACGTA 1 cut(s) 526
BstV1I GCAGC 3 cut(s) 338, 772, 814
BstV2I GAAGAC 2 cut(s) 813, 1023
BstXI CCANNNNNNTGG 1 cut(s) 911
BsuRI GGCC 4 cut(s) 110, 298, 656, 929
BtgI CCRYGG 3 cut(s) 48, 475, 910
BtsCI GGATG 6 cut(s) 58, 85, 176, 282, 553, 676
BtsI GCAGTG 2 cut(s) 780, 884
BtsIMutI CAGTG 3 cut(s) 482, 780, 884
BveI ACCTGC 1 cut(s) 875
Cac8I GCNNGC 2 cut(s) 85, 108
CciI TCATGA 1 cut(s) 514
CfoI GCGC 1 cut(s) 252
Cfr13I GGNCC 1 cut(s) 43
Cfr9I CCCGGG 1 cut(s) 738
Csp6I GTAC 4 cut(s) 4, 61, 193, 982
CviQI GTAC 4 cut(s) 4, 61, 193, 982
DdeI CTNAG 3 cut(s) 331, 404, 1152
DinI GGCGCC 1 cut(s) 251
DpnI GATC 4 cut(s) 212, 719, 801, 948
DpnII GATC 4 cut(s) 210, 717, 799, 946
EaeI YGGCCR 2 cut(s) 654, 927
EciI GGCGGA 1 cut(s) 1092
Eco105I TACGTA 1 cut(s) 526
Eco130I CCWWGG 2 cut(s) 620, 910
Eco32I GATATC 1 cut(s) 241
Eco47I GGWCC 1 cut(s) 43
Eco57I CTGAAG 1 cut(s) 825
Eco88I CYCGRG 1 cut(s) 738
EcoRII CCWGG 1 cut(s) 772
EcoRV GATATC 1 cut(s) 241
EcoT14I CCWWGG 2 cut(s) 620, 910
EcoT22I ATGCAT 1 cut(s) 58
EgeI GGCGCC 1 cut(s) 251
EheI GGCGCC 1 cut(s) 251
ErhI CCWWGG 2 cut(s) 620, 910
FaqI GGGAC 1 cut(s) 601
FauI CCCGC 3 cut(s) 76, 132, 227
FbaI TGATCA 1 cut(s) 717
FblI GTMKAC 1 cut(s) 552
Fnu4HI GCNGC 4 cut(s) 116, 327, 786, 828
FokI GGATG 6 cut(s) 65, 92, 163, 289, 560, 683
Fsp4HI GCNGC 4 cut(s) 116, 327, 786, 828
FspBI CTAG 5 cut(s) 311, 464, 645, 789, 1047
GlaI GCGC 1 cut(s) 251
GluI GCNGC 4 cut(s) 116, 327, 786, 828
HaeII RGCGCY 1 cut(s) 253
HaeIII GGCC 4 cut(s) 110, 298, 656, 929
HapII CCGG 3 cut(s) 199, 739, 1096
HhaI GCGC 1 cut(s) 252
Hin1I GRCGYC 1 cut(s) 250
Hin6I GCGC 1 cut(s) 250
HinP1I GCGC 1 cut(s) 250
HindIII AAGCTT 1 cut(s) 628
HinfI GANTC 4 cut(s) 262, 583, 614, 1099
HpaII CCGG 3 cut(s) 199, 739, 1096
HphI GGTGA 4 cut(s) 295, 316, 433, 1128
Hpy166II GTNNAC 3 cut(s) 358, 553, 984
Hpy188III TCNNGA 9 cut(s) 67, 223, 515, 539, 608, 634, 803, 950, 1096
Hpy8I GTNNAC 3 cut(s) 358, 553, 984
Hpy99I CGWCG 4 cut(s) 22, 706, 730, 1039
HpyAV CCTTC 1 cut(s) 661
HpyCH4III ACNGT 4 cut(s) 486, 557, 652, 1039
HpyCH4IV ACGT 3 cut(s) 195, 498, 525
HpyCH4V TGCA 3 cut(s) 56, 106, 674
HpyF10VI GCNNNNNNNGC 4 cut(s) 31, 112, 124, 785
HpyF3I CTNAG 3 cut(s) 331, 404, 1152
HpySE526I ACGT 3 cut(s) 195, 498, 525
Hsp92I GRCGYC 1 cut(s) 250
HspAI GCGC 1 cut(s) 250
KasI GGCGCC 1 cut(s) 249
Kpn2I TCCGGA 1 cut(s) 1095
Ksp22I TGATCA 1 cut(s) 717
Kzo9I GATC 4 cut(s) 210, 717, 799, 946
LmnI GCTCC 1 cut(s) 22
Lsp1109I GCAGC 3 cut(s) 338, 772, 814
LweI GCATC 3 cut(s) 43, 70, 661
MaeI CTAG 5 cut(s) 311, 464, 645, 789, 1047
MaeII ACGT 3 cut(s) 195, 498, 525
MaeIII GTNAC 5 cut(s) 143, 304, 338, 526, 853
MalI GATC 4 cut(s) 212, 719, 801, 948
MbiI CCGCTC 1 cut(s) 118
MboI GATC 4 cut(s) 210, 717, 799, 946
MboII GAAGA 3 cut(s) 818, 929, 1028
MlsI TGGCCA 2 cut(s) 656, 929
MluCI AATT 3 cut(s) 565, 954, 1069
MluNI TGGCCA 2 cut(s) 656, 929
Mly113I GGCGCC 1 cut(s) 250
MlyI GAGTC 3 cut(s) 271, 623, 1093
MmeI TCCRAC 3 cut(s) 379, 484, 684
MnlI CCTC 6 cut(s) 274, 288, 340, 613, 816, 822
Mox20I TGGCCA 2 cut(s) 656, 929
Mph1103I ATGCAT 1 cut(s) 58
MroI TCCGGA 1 cut(s) 1095
MroXI GAANNNNTTC 2 cut(s) 629, 1020
MscI TGGCCA 2 cut(s) 656, 929
MseI TTAA 4 cut(s) 129, 383, 576, 681
Msp20I TGGCCA 2 cut(s) 656, 929
MspI CCGG 3 cut(s) 199, 739, 1096
MspR9I CCNGG 3 cut(s) 739, 740, 774
MvaI CCWGG 1 cut(s) 774
MwoI GCNNNNNNNGC 4 cut(s) 31, 112, 124, 785
NarI GGCGCC 1 cut(s) 250
NciI CCSGG 2 cut(s) 739, 740
NcoI CCATGG 1 cut(s) 910
NdeII GATC 4 cut(s) 210, 717, 799, 946
NlaIV GGNNCC 5 cut(s) 45, 251, 749, 771, 778
NmuCI GTSAC 2 cut(s) 304, 853
NsiI ATGCAT 1 cut(s) 58
PagI TCATGA 1 cut(s) 514
PaqCI CACCTGC 1 cut(s) 875
PcsI WCGNNNNNNNCGW 2 cut(s) 263, 351
PdmI GAANNNNTTC 2 cut(s) 629, 1020
PfeI GAWTC 1 cut(s) 583
Pfl23II CGTACG 1 cut(s) 192
PflFI GACNNNGTC 1 cut(s) 1039
PkrI GCNGC 4 cut(s) 117, 328, 787, 829
PleI GAGTC 3 cut(s) 270, 622, 1093
PluTI GGCGCC 1 cut(s) 253
PpsI GAGTC 3 cut(s) 270, 622, 1093
Ppu21I YACGTR 1 cut(s) 526
PshBI ATTAAT 1 cut(s) 383
Psp1406I AACGTT 1 cut(s) 498
Psp6I CCWGG 1 cut(s) 772
PspGI CCWGG 1 cut(s) 772
PspLI CGTACG 1 cut(s) 192
PspN4I GGNNCC 5 cut(s) 45, 251, 749, 771, 778
PspPI GGNCC 1 cut(s) 43
PsyI GACNNNGTC 1 cut(s) 1039
RsaI GTAC 4 cut(s) 5, 62, 194, 983
RsaNI GTAC 4 cut(s) 4, 61, 193, 982
SaqAI TTAA 4 cut(s) 129, 383, 576, 681
SatI GCNGC 4 cut(s) 116, 327, 786, 828
Sau3AI GATC 4 cut(s) 210, 717, 799, 946
Sau96I GGNCC 1 cut(s) 43
SchI GAGTC 3 cut(s) 271, 623, 1093
ScrFI CCNGG 3 cut(s) 739, 740, 774
SfaNI GCATC 3 cut(s) 43, 70, 661
SfoI GGCGCC 1 cut(s) 251
SinI GGWCC 1 cut(s) 43
SmaI CCCGGG 1 cut(s) 740
SnaBI TACGTA 1 cut(s) 526
SpeI ACTAGT 1 cut(s) 310
Sse9I AATT 3 cut(s) 565, 954, 1069
SsiI CCGC 5 cut(s) 83, 116, 125, 234, 1103
SspDI GGCGCC 1 cut(s) 249
SspMI CTAG 5 cut(s) 311, 464, 645, 789, 1047
StyD4I CCNGG 3 cut(s) 737, 738, 772
StyI CCWWGG 2 cut(s) 620, 910
TaaI ACNGT 4 cut(s) 486, 557, 652, 1039
TaiI ACGT 3 cut(s) 198, 501, 528
TaqI TCGA 4 cut(s) 120, 222, 728, 949
TasI AATT 3 cut(s) 565, 954, 1069
TatI WGTACW 1 cut(s) 3
TauI GCSGC 1 cut(s) 118
TfiI GAWTC 1 cut(s) 583
Tru1I TTAA 4 cut(s) 129, 383, 576, 681
Tru9I TTAA 4 cut(s) 129, 383, 576, 681
TscAI CASTG 3 cut(s) 489, 787, 884
TseFI GTSAC 2 cut(s) 304, 853
TseI GCWGC 3 cut(s) 326, 785, 827
Tsp45I GTSAC 2 cut(s) 304, 853
TspDTI ATGAA 4 cut(s) 461, 503, 524, 986
TspGWI ACGGA 5 cut(s) 6, 65, 272, 393, 677
TspMI CCCGGG 1 cut(s) 738
TspRI CASTG 3 cut(s) 489, 787, 884
Tth111I GACNNNGTC 1 cut(s) 1039
VpaK11BI GGWCC 1 cut(s) 43
VspI ATTAAT 1 cut(s) 383
XapI RAATTY 2 cut(s) 565, 1069
XmaI CCCGGG 1 cut(s) 738
XmiI GTMKAC 1 cut(s) 552
XmnI GAANNNNTTC 2 cut(s) 629, 1020
XspI CTAG 5 cut(s) 311, 464, 645, 789, 1047
Zsp2I ATGCAT 1 cut(s) 58
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.