Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0002010

Physical Location & Seq

Genomic Coordinates Forward (+)

30984638 .. 30988119

Gene Structure 3482 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1257400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2184 bp

ATGGAAGGTCCGAGATTCCTGCGTTTTTTCTCCCTTTCCCTCTGCATAGGCCTAGTCCTCCTCTTCACTTGGTCCCACCTCCCTTACGCGCCGCCGTACGTCTCCGACCTCCTTGACTGCACAGCAAACTCCGCCTGGTGCTCCTCCAAAAACCGCATCCAAGCCAAACCCCCTATCCCAACGCGCCGCCTCAAAGACCACAGCTCCGACACCCCCCACCACCCTCTCGACCCCCTCACCATCCAAGAACTCAACGCCGTCCGCACCATCCTCAACTCCCACGCGCTCTTCACCTCCACCTCCTCCTACGCGCTCCACTCCATCGAGCTCCAGGAGCCCGACAAGTCCCTCGTCCTCGGATGGAAGCACGGCGACCCTCTCTTCCCCAGAAAGGCCTCTATCGTCGCACGTGTCGACAGCAAGTCGCTCGTGCTAACCGTCGACCTGACCACGTCCGAGGTGACCGTTCACGAGACCGGCTCCCACTACGGTTACCCGACGATGACGCTGGAGGAGCTGGCCGCTGCCACGTTCAGCCCGCTCAAGAACGCTGATTTCAACCGTACGATCGTCGAGCGCGGGGTCGATCTGGCGGACCTGGGGTGTCTCCCGCTTTCCACGGGGTGGTACGGCGGGGCCGACGAGAACAGGAGGTTGATTAAGGTGCAGTGCTATTCCACCAAAGATACTGTGAACTTCTACATGCGTCCAATCGAAGGGTTAACTGTTCTCGTTGACTTGGACACCCAACAGGTGGTGGAGATTTCGGATAAGGGCAGGGGCATCCCCATACCAAAGGCCGCCAATACAGATTATAGGTACTCAGCCCAAAGGCCCAATCAAGTGAAAAAGCTGATCAAGCCCATATCTATAGAGCAGCCGGAAGGGCCGAGTTTTACGGTAGAAAATGATCACTTGGTCAAATGGGCAAATTGGGAATTTCACTTGAAGCCTGACGCCAGGGCGGGCGTCATCGTATCCCGGGCCAAAGTTTGGGACCCGGAGACCGGGGAGTTGAGGGATGTGATGTACAAAGGGTTTACGTCAGAGTTGTTTGTGCCTTACATGGACCCCACTGATGCGTGGTACTTTAAGACCTATATGGATGCCGGTGAATACGGGTTCGGGTTACAGGCAATGCCTCTGGAGCCGCTTAACGATTGTCCGCGTAACGCCTACTATATGGATGGTGTGTTTGCGGCAGCTGATGGAAAACCATACGTCCGATCAAACATGGTTTGCATATTCGAGAGCTATACGGGCGATATCGGGTGGCGGCACACAGAGTGTCCGATAACGGGCATGGAGGTTAGGGAAGTGAGGCCAAAGGTGACATTGGTAGTTAGAATGGCAGCATCAGTTGCTAACTATGATTATATCGTCGACTGGGAGTTCCAAACAGACGGACTAATCAGGGTTAAGGTTGGACTTAGTGGCATTTTGATGGTGAAAGGCACCTCCTATGAGAACATGAACCAAGTCTCATCTAGCCAAGAGAATCTCTATGGCACCCTCTTGTCGGAGAACGTTATTGGCGTTATTCACGATCATTACGTCACATTTCATCTTGATATGGACGTGGACGGCTCAGATAACTCCTTTATGAAGGTGAATCTCCAAAGGCAGTCCAACTCCCCAACTGAATCACCAAGGAAAAGCTACTTGAAAGCTACTAAAACCGTTGCCAAAACTGAGAAAGATGCACAGATTAAGCTCAAACTCTATGACCCGTCCGAATTCCACGTGATCAACCCATCGAAAAAGACACGGGTTGGAAACCCTGTAGGGTACAAGTTGGTTCCCGGTGGCACTGCTGCTAGCTTGCTTGATCTTGACGACCCTCCCCAAAAGAGAGGTGCTTTTACAAACAATCAAATTTGGGTTACCCCATACAATAAGAGCGAACAATGGGCTGGTGGGTTGTTTGTAGACCAAAGCACAGGCGAAGATACTCTTGCCGTGTGGTCTAACAGGGACCGACCAATCGAGAACAAGGACATTGTGGTTTGGTACACATTAGGGTTTCATCACATACCCTGTCAAGAAGACTTCCCTATAATGCCAACTGTGTCATCTAGCTTCGATATCAAACCTGTCAATTTCTTTGAGAGTAACCCCATACTTCGGACTCCGCCTAACGTTGCCACAGATCTACCCGTTTGCACGGCTGCTGCTTCAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0001505 GO:0006807 GO:0006809 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009987 GO:0010033 GO:0017144 GO:0023052 GO:0032870 GO:0033993 GO:0034641 GO:0042133 GO:0042136 GO:0042221 GO:0044237 GO:0044249 GO:0044271 GO:0046209 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0065008 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0072593 GO:0097305 GO:0097306 GO:1901700 GO:1901701 GO:1903409 GO:2001057

KEGG Pathways

Metabolic & Signaling

ko00260 ko00350 ko00360 ko00410 ko00950 ko00960 ko01100 ko01110 map00260 map00350 map00360 map00410 map00950 map00960 map01100 map01110

Pfam Domains

Protein Families

Cu_amine_oxid Cu_amine_oxidN2 Cu_amine_oxidN3

Protein Analysis

728

Amino Acids

81.42

Weight (kDa)

5.75

Isoelectric Point (pI)

34.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu_amine_oxidN2	PF02727	74 - 155	1.4e-19	Copper amine oxidase, N2 domain
Cu_amine_oxidN3	PF02728	166 - 265	5.4e-25	Copper amine oxidase, N3 domain
Cu_amine_oxid	PF01179	290 - 707	3.2e-140	Copper amine oxidase, enzyme domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002010)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G12270 AT4G12280 AT4G12290 AT4G12290
fragaria_vesca	FvH4_5g00610 FvH4_5g00610 FvH4_5g00610 FvH4_5g00610 FvH4_5g00610
malus_domestica	MD02G1257400.v1.1 MD06G1075500.v1.1 MD16G1192400.v1.1
prunus_persica	Prupe.5G078700_v2.0.a1 Prupe.5G078900_v2.0.a1
pyrus_communis	pycom09g07970 pycom13g04890 pycom15g15380 pycom15g15390
rosa_chinensis	RchiOBHm_Chr5g0060271 RchiOBHm_Chr7g0201651 RchiOBHm_Chr7g0201661
rosa_laevigata	RLG00000003658
rosa_multiflora	Rmu_sc0001512.1_g000015 Rmu_sc0004811.1_g000006 Rmu_sc0004811.1_g000008 Rmu_sc0004811.1_g000009 Rmu_sc0004811.1_g000010 Rmu_sc0004811.1_g000011
rosa_roxburghii	Rroxscaffold_3G00255130 Rroxscaffold_3G00255140 Rroxscaffold_3G00255150 Rroxscaffold_6G00396720
rosa_rugosa	Rorug07G0065300 Rorug07G0065300
rosa_samantha	Rh7AG192300 Rh7AG192500 Rh7BG194400 Rh7BG194500 Rh7BG194600 Rh7CG203500 Rh7CG203600 Rh7CG203700 Rh7DG197700
rosa_wichuraiana	Rw7G016860 Rw7G016870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	1454, 1508
AccB7I	CCANNNNNTGG	3 cut(s)	624, 754, 993
AccBSI	CCGCTC	1 cut(s)	541
AccI	GTMKAC	4 cut(s)	414, 441, 1383, 1929
AccII	CGCG	6 cut(s)	89, 184, 284, 311, 579, 1168
AclI	AACGTT	2 cut(s)	1527, 2139
AcoI	YGGCCR	1 cut(s)	519
AcsI	RAATTY	3 cut(s)	938, 1736, 1875
AcuI	CTGAAG	1 cut(s)	2160
AcvI	CACGTG	2 cut(s)	410, 1744
AcyI	GRCGYC	2 cut(s)	957, 969
AdeI	CACNNNGTG	2 cut(s)	624, 1287
AfaI	GTAC	8 cut(s)	98, 565, 629, 821, 1031, 1088, 1790, 2012
AfiI	CCNNNNNNNGG	9 cut(s)	391, 624, 716, 754, 993, 1007, 1298, 1519, 2124
AflIII	ACRYGT	1 cut(s)	409
AgsI	TTSAA	3 cut(s)	559, 949, 1666
AhdI	GACNNNNNGTC	1 cut(s)	421
AjiI	CACGTC	2 cut(s)	453, 1579
AjnI	CCWGG	4 cut(s)	134, 330, 597, 959
Alw21I	GWGCWC	2 cut(s)	143, 330
Alw26I	GTCTC	5 cut(s)	106, 467, 611, 998, 1486
Ama87I	CYCGRG	1 cut(s)	981
AoxI	GGCC	9 cut(s)	49, 393, 519, 636, 798, 833, 887, 984, 1322
ApeKI	GCWGC	7 cut(s)	524, 877, 1202, 1352, 1814, 2168, 2171
ApoI	RAATTY	3 cut(s)	938, 1736, 1875
AspLEI	GCGC	5 cut(s)	91, 186, 286, 313, 579
AsuC2I	CCSGG	5 cut(s)	982, 983, 1001, 1009, 1803
AsuHPI	GGTGA	8 cut(s)	229, 283, 472, 1124, 1342, 1459, 1621, 1638
AsuNHI	GCTAGC	1 cut(s)	1817
AvaI	CYCGRG	1 cut(s)	981
AvaII	GGWCC	6 cut(s)	8, 72, 595, 997, 1069, 1975
BanI	GGYRCC	2 cut(s)	1454, 1508
BanII	GRGCYC	2 cut(s)	330, 339
BauI	CACGAG	2 cut(s)	428, 470
BbrPI	CACGTG	2 cut(s)	410, 1744
BbsI	GAAGAC	1 cut(s)	2052
Bbv12I	GWGCWC	2 cut(s)	143, 330
BbvI	GCAGC	7 cut(s)	511, 889, 1214, 1364, 1801, 2155, 2158
BccI	CCATC	8 cut(s)	248, 275, 329, 354, 1181, 1202, 1438, 1762
BceAI	ACGGC	7 cut(s)	79, 242, 385, 646, 1600, 1943, 2181
BcgI	CGANNNNNNTGC	3 cut(s)	35, 409, 443
BciT130I	CCWGG	4 cut(s)	136, 332, 599, 961
BciVI	GTATCC	1 cut(s)	988
BclI	TGATCA	3 cut(s)	855, 910, 1746
BcnI	CCSGG	5 cut(s)	982, 983, 1001, 1009, 1803
BcoDI	GTCTC	5 cut(s)	106, 467, 611, 998, 1486
BfaI	CTAG	4 cut(s)	53, 1488, 1818, 2076
BfmI	CTRYAG	2 cut(s)	870, 1782
BfuI	GTATCC	1 cut(s)	988
BglI	GCCNNNNNGGC	1 cut(s)	886
BglII	AGATCT	1 cut(s)	2149
Bme1390I	CCNGG	9 cut(s)	136, 332, 599, 961, 982, 983, 1001, 1009, 1803
Bme18I	GGWCC	6 cut(s)	8, 72, 595, 997, 1069, 1975
BmeRI	GACNNNNNGTC	1 cut(s)	421
BmeT110I	CYCGRG	1 cut(s)	981
BmgBI	CACGTC	2 cut(s)	453, 1579
BmrFI	CCNGG	9 cut(s)	136, 332, 599, 961, 982, 983, 1001, 1009, 1803
BmrI	ACTGGG	1 cut(s)	1396
BmsI	GCATC	6 cut(s)	165, 792, 1069, 1096, 1364, 1690
BmtI	GCTAGC	1 cut(s)	1821
BmuI	ACTGGG	1 cut(s)	1396
BpiI	GAAGAC	1 cut(s)	2052
BplI	GAGNNNNNCTC	2 cut(s)	464, 496
BpmI	CTGGAG	3 cut(s)	314, 530, 1166
BpuEI	CTTGAG	1 cut(s)	527
BpuMI	CCSGG	5 cut(s)	982, 983, 1001, 1009, 1803
BsaAI	YACGTR	2 cut(s)	410, 1744
BsaHI	GRCGYC	2 cut(s)	957, 969
BsaI	GGTCTC	2 cut(s)	467, 998
BsaJI	CCNNGG	8 cut(s)	355, 456, 598, 618, 960, 981, 1008, 1649
BsaXI	ACNNNNNCTCC	2 cut(s)	188, 218
Bsc4I	CCNNNNNNNGG	9 cut(s)	391, 624, 716, 754, 993, 1007, 1298, 1519, 2124
Bse118I	RCCGGY	2 cut(s)	476, 1109
Bse1I	ACTGG	1 cut(s)	1391
Bse3DI	GCAATG	1 cut(s)	1143
BseBI	CCWGG	4 cut(s)	136, 332, 599, 961
BseDI	CCNNGG	8 cut(s)	355, 456, 598, 618, 960, 981, 1008, 1649
BseGI	GGATG	8 cut(s)	156, 240, 267, 365, 783, 1027, 1111, 1192
BseLI	CCNNNNNNNGG	9 cut(s)	391, 624, 716, 754, 993, 1007, 1298, 1519, 2124
BseMI	GCAATG	1 cut(s)	1143
BseMII	CTCAG	3 cut(s)	837, 1602, 1683
BseNI	ACTGG	1 cut(s)	1391
BseRI	GAGGAG	4 cut(s)	50, 133, 292, 527
BseXI	GCAGC	7 cut(s)	511, 889, 1214, 1364, 1801, 2155, 2158
BsgI	GTGCAG	2 cut(s)	103, 686
Bsh1236I	CGCG	6 cut(s)	89, 184, 284, 311, 579, 1168
Bsh1285I	CGRYCG	1 cut(s)	570
BshFI	GGCC	9 cut(s)	51, 395, 521, 638, 800, 835, 889, 986, 1324
BshNI	GGYRCC	2 cut(s)	1454, 1508
BsiEI	CGRYCG	1 cut(s)	570
BsiHKAI	GWGCWC	2 cut(s)	143, 330
BsiHKCI	CYCGRG	1 cut(s)	981
BsiSI	CCGG	7 cut(s)	477, 881, 982, 1001, 1008, 1110, 1803
BsiWI	CGTACG	2 cut(s)	96, 563
BslFI	GGGAC	4 cut(s)	58, 331, 1010, 1988
BslI	CCNNNNNNNGG	9 cut(s)	391, 624, 716, 754, 993, 1007, 1298, 1519, 2124
BsmAI	GTCTC	5 cut(s)	106, 467, 611, 998, 1486
BsmBI	CGTCTC	1 cut(s)	106
BsmFI	GGGAC	4 cut(s)	58, 331, 1010, 1988
BsnI	GGCC	9 cut(s)	51, 395, 521, 638, 800, 835, 889, 986, 1324
Bso31I	GGTCTC	2 cut(s)	467, 998
BsoBI	CYCGRG	1 cut(s)	981
Bsp1286I	GDGCHC	3 cut(s)	143, 330, 339
Bsp1407I	TGTACA	1 cut(s)	1029
Bsp143I	GATC	9 cut(s)	567, 586, 855, 910, 1226, 1546, 1746, 1828, 2149
BspANI	GGCC	9 cut(s)	51, 395, 521, 638, 800, 835, 889, 986, 1324
BspCNI	CTCAG	3 cut(s)	836, 1601, 1684
BspFNI	CGCG	6 cut(s)	89, 184, 284, 311, 579, 1168
BspOI	GCTAGC	1 cut(s)	1821
BspQI	GCTCTTC	1 cut(s)	293
BspT107I	GGYRCC	2 cut(s)	1454, 1508
BspTNI	GGTCTC	2 cut(s)	467, 998
BsrBI	CCGCTC	1 cut(s)	541
BsrDI	GCAATG	1 cut(s)	1143
BsrFI	RCCGGY	2 cut(s)	476, 1109
BsrGI	TGTACA	1 cut(s)	1029
BsrI	ACTGG	1 cut(s)	1391
BssAI	RCCGGY	2 cut(s)	476, 1109
BssECI	CCNNGG	8 cut(s)	355, 456, 598, 618, 960, 981, 1008, 1649
BssMI	GATC	9 cut(s)	567, 586, 855, 910, 1226, 1546, 1746, 1828, 2149
BssNI	GRCGYC	2 cut(s)	957, 969
BssSI	CACGAG	2 cut(s)	428, 470
BssT1I	CCWWGG	1 cut(s)	1649
Bst2BI	CACGAG	2 cut(s)	428, 470
Bst2UI	CCWGG	4 cut(s)	136, 332, 599, 961
Bst4CI	ACNGT	9 cut(s)	439, 466, 491, 563, 691, 727, 901, 1681, 2068
Bst6I	CTCTTC	3 cut(s)	68, 293, 386
BstACI	GRCGYC	2 cut(s)	957, 969
BstAPI	GCANNNNNTGC	1 cut(s)	1361
BstAUI	TGTACA	1 cut(s)	1029
BstBAI	YACGTR	2 cut(s)	410, 1744
BstC8I	GCNNGC	5 cut(s)	519, 539, 967, 1819, 1823
BstDEI	CTNAG	4 cut(s)	823, 1430, 1588, 1692
BstDSI	CCRYGG	1 cut(s)	618
BstEII	GGTNACC	3 cut(s)	460, 491, 1882
BstF5I	GGATG	8 cut(s)	156, 240, 267, 365, 783, 1027, 1111, 1192
BstFNI	CGCG	6 cut(s)	89, 184, 284, 311, 579, 1168
BstHHI	GCGC	5 cut(s)	91, 186, 286, 313, 579
BstKTI	GATC	9 cut(s)	570, 589, 858, 913, 1229, 1549, 1749, 1831, 2152
BstMAI	GTCTC	5 cut(s)	106, 467, 611, 998, 1486
BstMBI	GATC	9 cut(s)	567, 586, 855, 910, 1226, 1546, 1746, 1828, 2149
BstMCI	CGRYCG	1 cut(s)	570
BstMWI	GCNNNNNNNGC	9 cut(s)	131, 334, 514, 859, 886, 1147, 1260, 1361, 2177
BstNI	CCWGG	4 cut(s)	136, 332, 599, 961
BstNSI	RCATGY	1 cut(s)	706
BstPI	GGTNACC	3 cut(s)	460, 491, 1882
BstSCI	CCNGG	9 cut(s)	134, 330, 597, 959, 980, 981, 999, 1007, 1801
BstSFI	CTRYAG	2 cut(s)	870, 1782
BstUI	CGCG	6 cut(s)	89, 184, 284, 311, 579, 1168
BstV1I	GCAGC	7 cut(s)	511, 889, 1214, 1364, 1801, 2155, 2158
BstV2I	GAAGAC	1 cut(s)	2052
BstX2I	RGATCY	1 cut(s)	2149
BstYI	RGATCY	1 cut(s)	2149
BsuI	GTATCC	1 cut(s)	988
BsuRI	GGCC	9 cut(s)	51, 395, 521, 638, 800, 835, 889, 986, 1324
BtgI	CCRYGG	1 cut(s)	618
BtrI	CACGTC	2 cut(s)	453, 1579
BtsCI	GGATG	8 cut(s)	156, 240, 267, 365, 783, 1027, 1111, 1192
BtsI	GCAGTG	2 cut(s)	674, 1809
BtsIMutI	CAGTG	3 cut(s)	674, 1074, 1809
Cac8I	GCNNGC	5 cut(s)	519, 539, 967, 1819, 1823
CfoI	GCGC	5 cut(s)	91, 186, 286, 313, 579
Cfr10I	RCCGGY	2 cut(s)	476, 1109
Cfr9I	CCCGGG	1 cut(s)	981
CseI	GACGC	4 cut(s)	514, 695, 958, 965
Csp6I	GTAC	8 cut(s)	97, 564, 628, 820, 1030, 1087, 1789, 2011
CviAII	CATG	5 cut(s)	703, 1066, 1234, 1303, 1471
CviQI	GTAC	8 cut(s)	97, 564, 628, 820, 1030, 1087, 1789, 2011
DdeI	CTNAG	4 cut(s)	823, 1430, 1588, 1692
DpnI	GATC	9 cut(s)	569, 588, 857, 912, 1228, 1548, 1748, 1830, 2151
DpnII	GATC	9 cut(s)	567, 586, 855, 910, 1226, 1546, 1746, 1828, 2149
DraIII	CACNNNGTG	2 cut(s)	624, 1287
DriI	GACNNNNNGTC	1 cut(s)	421
EaeI	YGGCCR	1 cut(s)	519
Eam1104I	CTCTTC	3 cut(s)	68, 293, 386
Eam1105I	GACNNNNNGTC	1 cut(s)	421
EarI	CTCTTC	3 cut(s)	68, 293, 386
EciI	GGCGGA	3 cut(s)	121, 608, 2121
Ecl136II	GAGCTC	1 cut(s)	328
Eco130I	CCWWGG	1 cut(s)	1649
Eco147I	AGGCCT	2 cut(s)	51, 395
Eco24I	GRGCYC	2 cut(s)	330, 339
Eco31I	GGTCTC	2 cut(s)	467, 998
Eco32I	GATATC	2 cut(s)	1267, 2086
Eco47I	GGWCC	6 cut(s)	8, 72, 595, 997, 1069, 1975
Eco53kI	GAGCTC	1 cut(s)	328
Eco57I	CTGAAG	1 cut(s)	2160
Eco72I	CACGTG	2 cut(s)	410, 1744
Eco88I	CYCGRG	1 cut(s)	981
Eco91I	GGTNACC	3 cut(s)	460, 491, 1882
EcoICRI	GAGCTC	1 cut(s)	328
EcoO109I	RGGNCCY	1 cut(s)	997
EcoO65I	GGTNACC	3 cut(s)	460, 491, 1882
EcoRI	GAATTC	1 cut(s)	1736
EcoRII	CCWGG	4 cut(s)	134, 330, 597, 959
EcoRV	GATATC	2 cut(s)	1267, 2086
EcoT14I	CCWWGG	1 cut(s)	1649
EcoT38I	GRGCYC	2 cut(s)	330, 339
ErhI	CCWWGG	1 cut(s)	1649
Esp3I	CGTCTC	1 cut(s)	106
FaeI	CATG	5 cut(s)	706, 1069, 1237, 1306, 1474
FalI	AAGNNNNNCTT	2 cut(s)	1938, 1970
FaqI	GGGAC	4 cut(s)	58, 331, 1010, 1988
FatI	CATG	5 cut(s)	702, 1065, 1233, 1302, 1470
FauI	CCCGC	5 cut(s)	546, 572, 618, 626, 958
FbaI	TGATCA	3 cut(s)	855, 910, 1746
FblI	GTMKAC	4 cut(s)	414, 441, 1383, 1929
FokI	GGATG	8 cut(s)	143, 227, 254, 372, 770, 1034, 1118, 1199
FriOI	GRGCYC	2 cut(s)	330, 339
FspBI	CTAG	4 cut(s)	53, 1488, 1818, 2076
GlaI	GCGC	5 cut(s)	90, 185, 285, 312, 578
GsuI	CTGGAG	3 cut(s)	314, 530, 1166
HaeIII	GGCC	9 cut(s)	51, 395, 521, 638, 800, 835, 889, 986, 1324
HapII	CCGG	7 cut(s)	477, 881, 982, 1001, 1008, 1110, 1803
HgaI	GACGC	4 cut(s)	514, 695, 958, 965
HhaI	GCGC	5 cut(s)	91, 186, 286, 313, 579
Hin1I	GRCGYC	2 cut(s)	957, 969
Hin1II	CATG	5 cut(s)	706, 1069, 1237, 1306, 1474
Hin6I	GCGC	5 cut(s)	89, 184, 284, 311, 577
HinP1I	GCGC	5 cut(s)	89, 184, 284, 311, 577
HincII	GTYRAC	5 cut(s)	415, 442, 723, 736, 1384
HindII	GTYRAC	5 cut(s)	415, 442, 723, 736, 1384
HinfI	GANTC	5 cut(s)	15, 1498, 1612, 1643, 2128
HpaI	GTTAAC	1 cut(s)	723
HpaII	CCGG	7 cut(s)	477, 881, 982, 1001, 1008, 1110, 1803
HphI	GGTGA	8 cut(s)	229, 283, 472, 1124, 1342, 1459, 1621, 1638
Hpy99I	CGWCG	6 cut(s)	407, 443, 502, 575, 644, 1385
HpyAV	CCTTC	3 cut(s)	710, 878, 1600
HpyCH4III	ACNGT	9 cut(s)	439, 466, 491, 563, 691, 727, 901, 1681, 2068
HpyCH4V	TGCA	6 cut(s)	45, 120, 667, 1242, 1703, 2163
HpyF10VI	GCNNNNNNNGC	9 cut(s)	131, 334, 514, 859, 886, 1147, 1260, 1361, 2177
HpyF3I	CTNAG	4 cut(s)	823, 1430, 1588, 1692
Hsp92I	GRCGYC	2 cut(s)	957, 969
Hsp92II	CATG	5 cut(s)	706, 1069, 1237, 1306, 1474
HspAI	GCGC	5 cut(s)	89, 184, 284, 311, 577
KflI	GGGWCCC	1 cut(s)	997
Ksp22I	TGATCA	3 cut(s)	855, 910, 1746
KspAI	GTTAAC	1 cut(s)	723
Kzo9I	GATC	9 cut(s)	567, 586, 855, 910, 1226, 1546, 1746, 1828, 2149
LguI	GCTCTTC	1 cut(s)	293
LmnI	GCTCC	8 cut(s)	146, 209, 318, 333, 334, 485, 514, 1147
Lsp1109I	GCAGC	7 cut(s)	511, 889, 1214, 1364, 1801, 2155, 2158
LweI	GCATC	6 cut(s)	165, 792, 1069, 1096, 1364, 1690
MaeI	CTAG	4 cut(s)	53, 1488, 1818, 2076
MaeIII	GTNAC	8 cut(s)	460, 491, 1128, 1169, 1330, 1555, 1882, 2111
MalI	GATC	9 cut(s)	569, 588, 857, 912, 1228, 1548, 1748, 1830, 2151
MbiI	CCGCTC	1 cut(s)	541
MboI	GATC	9 cut(s)	567, 586, 855, 910, 1226, 1546, 1746, 1828, 2149
MboII	GAAGA	5 cut(s)	55, 280, 373, 1958, 2057
MflI	RGATCY	1 cut(s)	2149
MhlI	GDGCHC	3 cut(s)	143, 330, 339
MluCI	AATT	5 cut(s)	931, 938, 1736, 1875, 2098
MlyI	GAGTC	1 cut(s)	2122
MmeI	TCCRAC	6 cut(s)	129, 231, 1405, 1500, 1653, 1753
MseI	TTAA	7 cut(s)	660, 722, 1092, 1155, 1419, 1710, 2182
MslI	CAYNNNNRTG	1 cut(s)	1442
MspA1I	CMGCKG	2 cut(s)	524, 1205
MspI	CCGG	7 cut(s)	477, 881, 982, 1001, 1008, 1110, 1803
MspR9I	CCNGG	9 cut(s)	136, 332, 599, 961, 982, 983, 1001, 1009, 1803
MvaI	CCWGG	4 cut(s)	136, 332, 599, 961
MvnI	CGCG	6 cut(s)	89, 184, 284, 311, 579, 1168
MwoI	GCNNNNNNNGC	9 cut(s)	131, 334, 514, 859, 886, 1147, 1260, 1361, 2177
NciI	CCSGG	5 cut(s)	982, 983, 1001, 1009, 1803
NdeII	GATC	9 cut(s)	567, 586, 855, 910, 1226, 1546, 1746, 1828, 2149
NheI	GCTAGC	1 cut(s)	1817
NlaIII	CATG	5 cut(s)	706, 1069, 1237, 1306, 1474
NmeAIII	GCCGAG	1 cut(s)	915
NmuCI	GTSAC	3 cut(s)	460, 1330, 1555
NspI	RCATGY	1 cut(s)	706
PceI	AGGCCT	2 cut(s)	51, 395
PciSI	GCTCTTC	1 cut(s)	293
PcsI	WCGNNNNNNNCGW	5 cut(s)	411, 435, 636, 1533, 1551
PfeI	GAWTC	4 cut(s)	15, 1498, 1612, 1643
Pfl23II	CGTACG	2 cut(s)	96, 563
PflFI	GACNNNGTC	1 cut(s)	451
PflMI	CCANNNNNTGG	3 cut(s)	624, 754, 993
PfoI	TCCNGGA	1 cut(s)	330
Ple19I	CGATCG	1 cut(s)	570
PleI	GAGTC	1 cut(s)	2122
PmaCI	CACGTG	2 cut(s)	410, 1744
PmlI	CACGTG	2 cut(s)	410, 1744
PpsI	GAGTC	1 cut(s)	2122
Ppu21I	YACGTR	2 cut(s)	410, 1744
PpuMI	RGGWCCY	1 cut(s)	997
Psp124BI	GAGCTC	1 cut(s)	330
Psp1406I	AACGTT	2 cut(s)	1527, 2139
Psp5II	RGGWCCY	1 cut(s)	997
Psp6I	CCWGG	4 cut(s)	134, 330, 597, 959
PspCI	CACGTG	2 cut(s)	410, 1744
PspEI	GGTNACC	3 cut(s)	460, 491, 1882
PspGI	CCWGG	4 cut(s)	134, 330, 597, 959
PspLI	CGTACG	2 cut(s)	96, 563
PspPPI	RGGWCCY	1 cut(s)	997
PsuI	RGATCY	1 cut(s)	2149
PsyI	GACNNNGTC	1 cut(s)	451
PvuI	CGATCG	1 cut(s)	570
PvuII	CAGCTG	1 cut(s)	1205
RsaI	GTAC	8 cut(s)	98, 565, 629, 821, 1031, 1088, 1790, 2012
RsaNI	GTAC	8 cut(s)	97, 564, 628, 820, 1030, 1087, 1789, 2011
RseI	CAYNNNNRTG	1 cut(s)	1442
SacI	GAGCTC	1 cut(s)	330
SalI	GTCGAC	3 cut(s)	413, 440, 1382
SapI	GCTCTTC	1 cut(s)	293
SaqAI	TTAA	7 cut(s)	660, 722, 1092, 1155, 1419, 1710, 2182
Sau3AI	GATC	9 cut(s)	567, 586, 855, 910, 1226, 1546, 1746, 1828, 2149
SchI	GAGTC	1 cut(s)	2122
ScrFI	CCNGG	9 cut(s)	136, 332, 599, 961, 982, 983, 1001, 1009, 1803
SduI	GDGCHC	3 cut(s)	143, 330, 339
SfaNI	GCATC	6 cut(s)	165, 792, 1069, 1096, 1364, 1690
SfcI	CTRYAG	2 cut(s)	870, 1782
SinI	GGWCC	6 cut(s)	8, 72, 595, 997, 1069, 1975
SmaI	CCCGGG	1 cut(s)	983
SmiMI	CAYNNNNRTG	1 cut(s)	1442
SmlI	CTYRAG	1 cut(s)	542
SmoI	CTYRAG	1 cut(s)	542
Sse9I	AATT	5 cut(s)	931, 938, 1736, 1875, 2098
SseBI	AGGCCT	2 cut(s)	51, 395
SspMI	CTAG	4 cut(s)	53, 1488, 1818, 2076
SstI	GAGCTC	1 cut(s)	330
StuI	AGGCCT	2 cut(s)	51, 395
StyD4I	CCNGG	9 cut(s)	134, 330, 597, 959, 980, 981, 999, 1007, 1801
StyI	CCWWGG	1 cut(s)	1649
TaaI	ACNGT	9 cut(s)	439, 466, 491, 563, 691, 727, 901, 1681, 2068
TaqII	GACCGA	1 cut(s)	1992
TasI	AATT	5 cut(s)	931, 938, 1736, 1875, 2098
TatI	WGTACW	1 cut(s)	1029
TauI	GCSGC	7 cut(s)	94, 189, 524, 803, 1153, 1202, 1279
TfiI	GAWTC	4 cut(s)	15, 1498, 1612, 1643
Tru1I	TTAA	7 cut(s)	660, 722, 1092, 1155, 1419, 1710, 2182
Tru9I	TTAA	7 cut(s)	660, 722, 1092, 1155, 1419, 1710, 2182
TscAI	CASTG	3 cut(s)	674, 1081, 1816
TseFI	GTSAC	3 cut(s)	460, 1330, 1555
TseI	GCWGC	7 cut(s)	524, 877, 1202, 1352, 1814, 2168, 2171
Tsp45I	GTSAC	3 cut(s)	460, 1330, 1555
TspDTI	ATGAA	4 cut(s)	1487, 1553, 1619, 2015
TspGWI	ACGGA	1 cut(s)	1419
TspMI	CCCGGG	1 cut(s)	981
TspRI	CASTG	3 cut(s)	674, 1081, 1816
Tth111I	GACNNNGTC	1 cut(s)	451
Van91I	CCANNNNNTGG	3 cut(s)	624, 754, 993
VpaK11BI	GGWCC	6 cut(s)	8, 72, 595, 997, 1069, 1975
XapI	RAATTY	3 cut(s)	938, 1736, 1875
XceI	RCATGY	1 cut(s)	706
XmaI	CCCGGG	1 cut(s)	981
XmiI	GTMKAC	4 cut(s)	414, 441, 1383, 1929
XspI	CTAG	4 cut(s)	53, 1488, 1818, 2076

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.