Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0002010

Physical Location & Seq

Genomic Coordinates Forward (+)

3277565 .. 3280406

Gene Structure 2842 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g04890.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2184 bp

ATGGAAGGTCGGAGATTCCTGCGTTTTTTCTCCCTTTCCCTCTGCATAAGCCTAGTCCTCCTCTTCACTTGGTCCCACCTCCCTTACGCGCCGCCGTACGCCTCCGACCTCCTCGACTGCACAACAAACTCCGCCTGGTGCTCCTCCAAAAACCGCATCCAATCCAAACCCCATATCCCAACGCGCCGCCTCAAAGACCACAGCTCCGACACCCCCCACCACCCTCTCGACCCCCTCACCATCCGAGAACTCAACGCCGTCCGCACCATCCTCAACTCCCACGCGCTCTTCACCTCCACCTCCTCCTACGCGCTCCACTCCGTCGAGCTCCAGGAGCCCGACAAGTCCCTCGTCCTCGGATGGAAGCACGGTGACCCTCTCTTCCCCAGAAAGGCCTCTATCGTCGCACGTGTCGACAGCAAGTCGCTCGTGCTAACCGTCGACCTGACCACGTCCGAGGTGACCGTTCACGAGACCGGCTCCCACTACGGTTACCCGATGATGACGCTGGAGGAGCTGACCGCTGCCACGTTCAGCCCCCTCAAGAACGCTGATTTCAACCGTACGATCGTCGACCGCGGGGTCGATCTGGCGGACCTGAGGTGTCTCCCGCTTTCCACGGGGTGGTACGGCGTGGCCAACGAGAACAGGAGGTTGATTAAGGTGCAGTGCTACTCCACCAAGGATACTGTGAACTTCTACATGCGTCCAATCGAAGGGTTAACTGTTCTCGTTGACCTGGACACCAAACAAGTGCTGGAGATTTCGGATAAGGGCAGGAGCATCCCCATACCAAAGGCCGCCAATACAGATTATAGGTACTCAGCCCAAAGGCCCGATCAAGTGAAAAAGGTGATCAAGCCCATATCTATAGAACAGCCGGATGGGCCGAGTTTTACGGTAGAAAATGATCATTTGGTCAAATGGGCAAATTGGGAATTTCACTTGAAGCCTGACGCCAGGGCGGGCGTCATCGTATCCCGGGCCAAAGTTCGGGACCCGGATACCGGGGAGTTGAGGGATGTGATGTACAAAGGGTTTACGTCAGAGTTGTTTGTGCCTTACATGGACCCCACCGATGCGTGGTACTTTAAGACCTATATGGATGCCGGCGAATACGGGTTCGGGTTACAGGGAATGCCTCTGGAGCCGCTTAATGATTGTCCGCGTAACGCCTACTATATGGATGGTGTGTTTGCGGCAGCTGATGGAAAACCATACGTCCGATCAAACATGGTTTGCATATTCGAGAGCTATACGGGCGATATCGGGTGGCGGCACACAGAGTGTCCAATAACGGGCATGGAGGTTAGGGAAGTGAGGCCAAAGGTGACCTTGGTAGTTAGAATGGCAGCATCAGTTGCTAACTATGATTATATCGTCGACTGGGAGTTCCAAACAGACGGACTAATCAGAGTTAAGGTTGGACTTAGTGGCATTTTGATGGTGAAAGGCACCTCCTATGAGAACATGAACCAAGTCTCATCTAGCCCAGAGAATCTCTATGGCACCCTCTTGTCGGAGAACGTTATTGGCGTTATTCACGATCATTACGTCACATTTCATCTTGATATGGACGTGGACGGCTCAGATAACTCCTTTATGAAGGTGAATCTCCAAAGGCAGTCTAACCCCCCAACTGAATCACCAAGGAAAAGCTACTTGAAAGCTACTAAAACCGTTGCCAAAACTGAGAAAGATGCACAGATTAAGCTCAAACTCTACGACCCGTCCGAATTCCACGTGATCAACCCGTCGAAAAAGACACGGATTGGAAACCCTGTAGGGTACAAGTTGGTTCCCGGTGGCACTGCTGCTAGCTTGCTTGATCTTGACGACCCTCCCCAAAAGAGAGGTGCTTTTACAAACAATCAAATTTGGGTTACCCCATACAATAGGAGTGAACAATGGGCGGGTGGGTTGTTTGTAGACCAAAGCACGGGCGAAGATACGCTTGCCGTGTGGTCTAACAGGGACCGACCAATCGAGAACAAGGACATTGTGGTTTGGTACACATTAGGGTTTCATCACATACCCTGTCAAGAAGACTTCCCTATAATGCCAACTGTGTCATCTAGCTTCGATATCAAACCTGTCAATTTCTTTGAGAGTAACCCCATACTTCGGACTCCGCCTAACGTTGCCACAGATCTACCCGTTTGCACGGCTGCTGCTTCAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0001505 GO:0006807 GO:0006809 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009987 GO:0010033 GO:0017144 GO:0023052 GO:0032870 GO:0033993 GO:0034641 GO:0042133 GO:0042136 GO:0042221 GO:0044237 GO:0044249 GO:0044271 GO:0046209 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0065008 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0072593 GO:0097305 GO:0097306 GO:1901700 GO:1901701 GO:1903409 GO:2001057

KEGG Pathways

Metabolic & Signaling

ko00260 ko00350 ko00360 ko00410 ko00950 ko00960 ko01100 ko01110 map00260 map00350 map00360 map00410 map00950 map00960 map01100 map01110

Pfam Domains

Protein Families

Cu_amine_oxid Cu_amine_oxidN2 Cu_amine_oxidN3

Protein Analysis

728

Amino Acids

81.75

Weight (kDa)

6.12

Isoelectric Point (pI)

35.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu_amine_oxidN2	PF02727	74 - 155	3.8e-19	Copper amine oxidase, N2 domain
Cu_amine_oxidN3	PF02728	166 - 265	8.6e-27	Copper amine oxidase, N3 domain
Cu_amine_oxid	PF01179	290 - 707	1.8e-139	Copper amine oxidase, enzyme domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002010)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G12270 AT4G12280 AT4G12290 AT4G12290
fragaria_vesca	FvH4_5g00610 FvH4_5g00610 FvH4_5g00610 FvH4_5g00610 FvH4_5g00610
malus_domestica	MD02G1257400.v1.1 MD06G1075500.v1.1 MD16G1192400.v1.1
prunus_persica	Prupe.5G078700_v2.0.a1 Prupe.5G078900_v2.0.a1
pyrus_communis	pycom09g07970 pycom13g04890 pycom15g15380 pycom15g15390
rosa_chinensis	RchiOBHm_Chr5g0060271 RchiOBHm_Chr7g0201651 RchiOBHm_Chr7g0201661
rosa_laevigata	RLG00000003658
rosa_multiflora	Rmu_sc0001512.1_g000015 Rmu_sc0004811.1_g000006 Rmu_sc0004811.1_g000008 Rmu_sc0004811.1_g000009 Rmu_sc0004811.1_g000010 Rmu_sc0004811.1_g000011
rosa_roxburghii	Rroxscaffold_3G00255130 Rroxscaffold_3G00255140 Rroxscaffold_3G00255150 Rroxscaffold_6G00396720
rosa_rugosa	Rorug07G0065300 Rorug07G0065300
rosa_samantha	Rh7AG192300 Rh7AG192500 Rh7BG194400 Rh7BG194500 Rh7BG194600 Rh7CG203500 Rh7CG203600 Rh7CG203700 Rh7DG197700
rosa_wichuraiana	Rw7G016860 Rw7G016870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	581
AccB1I	GGYRCC	2 cut(s)	1454, 1508
AccB7I	CCANNNNNTGG	1 cut(s)	624
AccI	GTMKAC	5 cut(s)	414, 441, 573, 1383, 1929
AccII	CGCG	6 cut(s)	89, 184, 284, 311, 579, 1168
AclI	AACGTT	2 cut(s)	1527, 2139
AcoI	YGGCCR	1 cut(s)	636
AcsI	RAATTY	3 cut(s)	938, 1736, 1875
AcuI	CTGAAG	1 cut(s)	2160
AcvI	CACGTG	2 cut(s)	410, 1744
AcyI	GRCGYC	2 cut(s)	957, 969
AdeI	CACNNNGTG	2 cut(s)	624, 1287
AfaI	GTAC	8 cut(s)	98, 565, 629, 821, 1031, 1088, 1790, 2012
AflIII	ACRYGT	1 cut(s)	409
AgsI	TTSAA	3 cut(s)	559, 949, 1666
AhdI	GACNNNNNGTC	1 cut(s)	421
AjiI	CACGTC	2 cut(s)	453, 1579
AjnI	CCWGG	4 cut(s)	134, 330, 738, 959
Alw21I	GWGCWC	2 cut(s)	143, 330
Alw26I	GTCTC	3 cut(s)	467, 611, 1486
Ama87I	CYCGRG	1 cut(s)	981
AoxI	GGCC	7 cut(s)	393, 636, 798, 833, 887, 984, 1322
ApeKI	GCWGC	6 cut(s)	524, 1202, 1352, 1814, 2168, 2171
ApoI	RAATTY	3 cut(s)	938, 1736, 1875
AspLEI	GCGC	4 cut(s)	91, 186, 286, 313
AspS9I	GGNCC	8 cut(s)	72, 595, 834, 887, 984, 997, 1069, 1975
AsuC2I	CCSGG	5 cut(s)	982, 983, 1001, 1009, 1803
AsuHPI	GGTGA	9 cut(s)	229, 283, 383, 472, 865, 1342, 1459, 1621, 1638
AsuNHI	GCTAGC	1 cut(s)	1817
AvaI	CYCGRG	1 cut(s)	981
AvaII	GGWCC	5 cut(s)	72, 595, 997, 1069, 1975
AxyI	CCTNAGG	1 cut(s)	599
BalI	TGGCCA	1 cut(s)	638
BanI	GGYRCC	2 cut(s)	1454, 1508
BanII	GRGCYC	2 cut(s)	330, 339
BauI	CACGAG	2 cut(s)	428, 470
BbrPI	CACGTG	2 cut(s)	410, 1744
BbsI	GAAGAC	1 cut(s)	2052
Bbv12I	GWGCWC	2 cut(s)	143, 330
BbvI	GCAGC	6 cut(s)	511, 1214, 1364, 1801, 2155, 2158
BccI	CCATC	7 cut(s)	248, 275, 354, 878, 1181, 1202, 1438
BceAI	ACGGC	6 cut(s)	79, 242, 646, 1600, 1943, 2181
BcgI	CGANNNNNNTGC	2 cut(s)	409, 443
BciT130I	CCWGG	4 cut(s)	136, 332, 740, 961
BciVI	GTATCC	3 cut(s)	679, 988, 997
BclI	TGATCA	3 cut(s)	855, 910, 1746
BcnI	CCSGG	5 cut(s)	982, 983, 1001, 1009, 1803
BcoDI	GTCTC	3 cut(s)	467, 611, 1486
BfaI	CTAG	4 cut(s)	53, 1488, 1818, 2076
BfmI	CTRYAG	2 cut(s)	870, 1782
BfuI	GTATCC	3 cut(s)	679, 988, 997
BglI	GCCNNNNNGGC	1 cut(s)	886
BglII	AGATCT	1 cut(s)	2149
Bme1390I	CCNGG	9 cut(s)	136, 332, 740, 961, 982, 983, 1001, 1009, 1803
Bme18I	GGWCC	5 cut(s)	72, 595, 997, 1069, 1975
BmeRI	GACNNNNNGTC	1 cut(s)	421
BmeT110I	CYCGRG	1 cut(s)	981
BmgBI	CACGTC	2 cut(s)	453, 1579
BmgT120I	GGNCC	8 cut(s)	72, 595, 834, 887, 984, 997, 1069, 1975
BmrFI	CCNGG	9 cut(s)	136, 332, 740, 961, 982, 983, 1001, 1009, 1803
BmrI	ACTGGG	1 cut(s)	1396
BmsI	GCATC	6 cut(s)	165, 792, 1069, 1096, 1364, 1690
BmtI	GCTAGC	1 cut(s)	1821
BmuI	ACTGGG	1 cut(s)	1396
BpiI	GAAGAC	1 cut(s)	2052
BplI	GAGNNNNNCTC	2 cut(s)	464, 496
BpmI	CTGGAG	4 cut(s)	314, 530, 779, 1166
BpuEI	CTTGAG	1 cut(s)	527
BpuMI	CCSGG	5 cut(s)	982, 983, 1001, 1009, 1803
BsaAI	YACGTR	2 cut(s)	410, 1744
BsaHI	GRCGYC	2 cut(s)	957, 969
BsaI	GGTCTC	1 cut(s)	467
BsaXI	ACNNNNNCTCC	2 cut(s)	188, 218
Bse118I	RCCGGY	2 cut(s)	476, 1109
Bse1I	ACTGG	1 cut(s)	1391
Bse21I	CCTNAGG	1 cut(s)	599
BseBI	CCWGG	4 cut(s)	136, 332, 740, 961
BseGI	GGATG	9 cut(s)	156, 240, 267, 365, 783, 889, 1027, 1111, 1192
BseMII	CTCAG	4 cut(s)	590, 837, 1602, 1683
BseNI	ACTGG	1 cut(s)	1391
BseRI	GAGGAG	5 cut(s)	50, 101, 133, 292, 527
BseXI	GCAGC	6 cut(s)	511, 1214, 1364, 1801, 2155, 2158
BsgI	GTGCAG	2 cut(s)	103, 686
Bsh1236I	CGCG	6 cut(s)	89, 184, 284, 311, 579, 1168
Bsh1285I	CGRYCG	2 cut(s)	570, 577
BshFI	GGCC	7 cut(s)	395, 638, 800, 835, 889, 986, 1324
BshNI	GGYRCC	2 cut(s)	1454, 1508
BsiEI	CGRYCG	2 cut(s)	570, 577
BsiHKAI	GWGCWC	2 cut(s)	143, 330
BsiHKCI	CYCGRG	1 cut(s)	981
BsiSI	CCGG	7 cut(s)	477, 881, 982, 1001, 1008, 1110, 1803
BsiWI	CGTACG	2 cut(s)	96, 563
BslFI	GGGAC	4 cut(s)	58, 331, 1010, 1988
BsmAI	GTCTC	3 cut(s)	467, 611, 1486
BsmFI	GGGAC	4 cut(s)	58, 331, 1010, 1988
BsmI	GAATGC	1 cut(s)	1143
BsnI	GGCC	7 cut(s)	395, 638, 800, 835, 889, 986, 1324
Bso31I	GGTCTC	1 cut(s)	467
BsoBI	CYCGRG	1 cut(s)	981
Bsp1286I	GDGCHC	3 cut(s)	143, 330, 339
Bsp1407I	TGTACA	1 cut(s)	1029
BspANI	GGCC	7 cut(s)	395, 638, 800, 835, 889, 986, 1324
BspCNI	CTCAG	4 cut(s)	591, 836, 1601, 1684
BspFNI	CGCG	6 cut(s)	89, 184, 284, 311, 579, 1168
BspOI	GCTAGC	1 cut(s)	1821
BspQI	GCTCTTC	1 cut(s)	293
BspT107I	GGYRCC	2 cut(s)	1454, 1508
BspTNI	GGTCTC	1 cut(s)	467
BsrFI	RCCGGY	2 cut(s)	476, 1109
BsrGI	TGTACA	1 cut(s)	1029
BsrI	ACTGG	1 cut(s)	1391
BssAI	RCCGGY	2 cut(s)	476, 1109
BssNI	GRCGYC	2 cut(s)	957, 969
BssSI	CACGAG	2 cut(s)	428, 470
BssT1I	CCWWGG	3 cut(s)	681, 1335, 1649
Bst2BI	CACGAG	2 cut(s)	428, 470
Bst2UI	CCWGG	4 cut(s)	136, 332, 740, 961
Bst6I	CTCTTC	3 cut(s)	68, 293, 386
BstACI	GRCGYC	2 cut(s)	957, 969
BstAPI	GCANNNNNTGC	1 cut(s)	1361
BstAUI	TGTACA	1 cut(s)	1029
BstBAI	YACGTR	2 cut(s)	410, 1744
BstC8I	GCNNGC	5 cut(s)	967, 1111, 1819, 1823, 1956
BstDEI	CTNAG	5 cut(s)	599, 823, 1430, 1588, 1692
BstDSI	CCRYGG	2 cut(s)	577, 618
BstEII	GGTNACC	5 cut(s)	371, 460, 491, 1330, 1882
BstF5I	GGATG	9 cut(s)	156, 240, 267, 365, 783, 889, 1027, 1111, 1192
BstFNI	CGCG	6 cut(s)	89, 184, 284, 311, 579, 1168
BstHHI	GCGC	4 cut(s)	91, 186, 286, 313
BstMAI	GTCTC	3 cut(s)	467, 611, 1486
BstMCI	CGRYCG	2 cut(s)	570, 577
BstMWI	GCNNNNNNNGC	7 cut(s)	334, 514, 886, 1147, 1260, 1361, 2177
BstNI	CCWGG	4 cut(s)	136, 332, 740, 961
BstNSI	RCATGY	1 cut(s)	706
BstPI	GGTNACC	5 cut(s)	371, 460, 491, 1330, 1882
BstSCI	CCNGG	9 cut(s)	134, 330, 738, 959, 980, 981, 999, 1007, 1801
BstSFI	CTRYAG	2 cut(s)	870, 1782
BstUI	CGCG	6 cut(s)	89, 184, 284, 311, 579, 1168
BstV1I	GCAGC	6 cut(s)	511, 1214, 1364, 1801, 2155, 2158
BstV2I	GAAGAC	1 cut(s)	2052
BstX2I	RGATCY	1 cut(s)	2149
BstYI	RGATCY	1 cut(s)	2149
Bsu36I	CCTNAGG	1 cut(s)	599
BsuI	GTATCC	3 cut(s)	679, 988, 997
BsuRI	GGCC	7 cut(s)	395, 638, 800, 835, 889, 986, 1324
BtgI	CCRYGG	2 cut(s)	577, 618
BtrI	CACGTC	2 cut(s)	453, 1579
BtsCI	GGATG	9 cut(s)	156, 240, 267, 365, 783, 889, 1027, 1111, 1192
BtsI	GCAGTG	2 cut(s)	674, 1809
BtsIMutI	CAGTG	2 cut(s)	674, 1809
Cac8I	GCNNGC	5 cut(s)	967, 1111, 1819, 1823, 1956
CfoI	GCGC	4 cut(s)	91, 186, 286, 313
Cfr10I	RCCGGY	2 cut(s)	476, 1109
Cfr13I	GGNCC	8 cut(s)	72, 595, 834, 887, 984, 997, 1069, 1975
Cfr42I	CCGCGG	1 cut(s)	580
Cfr9I	CCCGGG	1 cut(s)	981
CseI	GACGC	4 cut(s)	514, 695, 958, 965
Csp6I	GTAC	8 cut(s)	97, 564, 628, 820, 1030, 1087, 1789, 2011
CviAII	CATG	5 cut(s)	703, 1066, 1234, 1303, 1471
CviQI	GTAC	8 cut(s)	97, 564, 628, 820, 1030, 1087, 1789, 2011
DdeI	CTNAG	5 cut(s)	599, 823, 1430, 1588, 1692
DraIII	CACNNNGTG	2 cut(s)	624, 1287
DrdI	GACNNNNNNGTC	1 cut(s)	581
DriI	GACNNNNNGTC	1 cut(s)	421
DseDI	GACNNNNNNGTC	1 cut(s)	581
EaeI	YGGCCR	1 cut(s)	636
Eam1104I	CTCTTC	3 cut(s)	68, 293, 386
Eam1105I	GACNNNNNGTC	1 cut(s)	421
EarI	CTCTTC	3 cut(s)	68, 293, 386
EciI	GGCGGA	3 cut(s)	121, 608, 2121
Ecl136II	GAGCTC	1 cut(s)	328
Eco130I	CCWWGG	3 cut(s)	681, 1335, 1649
Eco147I	AGGCCT	1 cut(s)	395
Eco24I	GRGCYC	2 cut(s)	330, 339
Eco31I	GGTCTC	1 cut(s)	467
Eco32I	GATATC	2 cut(s)	1267, 2086
Eco47I	GGWCC	5 cut(s)	72, 595, 997, 1069, 1975
Eco53kI	GAGCTC	1 cut(s)	328
Eco57I	CTGAAG	1 cut(s)	2160
Eco72I	CACGTG	2 cut(s)	410, 1744
Eco81I	CCTNAGG	1 cut(s)	599
Eco88I	CYCGRG	1 cut(s)	981
Eco91I	GGTNACC	5 cut(s)	371, 460, 491, 1330, 1882
EcoICRI	GAGCTC	1 cut(s)	328
EcoO109I	RGGNCCY	1 cut(s)	997
EcoO65I	GGTNACC	5 cut(s)	371, 460, 491, 1330, 1882
EcoRI	GAATTC	1 cut(s)	1736
EcoRII	CCWGG	4 cut(s)	134, 330, 738, 959
EcoRV	GATATC	2 cut(s)	1267, 2086
EcoT14I	CCWWGG	3 cut(s)	681, 1335, 1649
EcoT38I	GRGCYC	2 cut(s)	330, 339
ErhI	CCWWGG	3 cut(s)	681, 1335, 1649
FaeI	CATG	5 cut(s)	706, 1069, 1237, 1306, 1474
FalI	AAGNNNNNCTT	4 cut(s)	1319, 1351, 1938, 1970
FaqI	GGGAC	4 cut(s)	58, 331, 1010, 1988
FatI	CATG	5 cut(s)	702, 1065, 1233, 1302, 1470
FauI	CCCGC	4 cut(s)	572, 618, 958, 1906
FbaI	TGATCA	3 cut(s)	855, 910, 1746
FblI	GTMKAC	5 cut(s)	414, 441, 573, 1383, 1929
FokI	GGATG	9 cut(s)	143, 227, 254, 372, 770, 896, 1034, 1118, 1199
FriOI	GRGCYC	2 cut(s)	330, 339
FspBI	CTAG	4 cut(s)	53, 1488, 1818, 2076
GlaI	GCGC	4 cut(s)	90, 185, 285, 312
GsuI	CTGGAG	4 cut(s)	314, 530, 779, 1166
HaeIII	GGCC	7 cut(s)	395, 638, 800, 835, 889, 986, 1324
HapII	CCGG	7 cut(s)	477, 881, 982, 1001, 1008, 1110, 1803
HgaI	GACGC	4 cut(s)	514, 695, 958, 965
HhaI	GCGC	4 cut(s)	91, 186, 286, 313
Hin1I	GRCGYC	2 cut(s)	957, 969
Hin1II	CATG	5 cut(s)	706, 1069, 1237, 1306, 1474
Hin6I	GCGC	4 cut(s)	89, 184, 284, 311
HinP1I	GCGC	4 cut(s)	89, 184, 284, 311
HincII	GTYRAC	6 cut(s)	415, 442, 574, 723, 736, 1384
HindII	GTYRAC	6 cut(s)	415, 442, 574, 723, 736, 1384
HinfI	GANTC	5 cut(s)	15, 1498, 1612, 1643, 2128
HpaI	GTTAAC	1 cut(s)	723
HpaII	CCGG	7 cut(s)	477, 881, 982, 1001, 1008, 1110, 1803
HphI	GGTGA	9 cut(s)	229, 283, 383, 472, 865, 1342, 1459, 1621, 1638
Hpy99I	CGWCG	6 cut(s)	326, 407, 443, 575, 1385, 1759
HpyAV	CCTTC	2 cut(s)	710, 1600
HpyCH4V	TGCA	6 cut(s)	45, 120, 667, 1242, 1703, 2163
HpyF10VI	GCNNNNNNNGC	7 cut(s)	334, 514, 886, 1147, 1260, 1361, 2177
HpyF3I	CTNAG	5 cut(s)	599, 823, 1430, 1588, 1692
Hsp92I	GRCGYC	2 cut(s)	957, 969
Hsp92II	CATG	5 cut(s)	706, 1069, 1237, 1306, 1474
HspAI	GCGC	4 cut(s)	89, 184, 284, 311
KflI	GGGWCCC	1 cut(s)	997
KroI	GCCGGC	1 cut(s)	1109
KroNI	GCCGGC	1 cut(s)	1111
Ksp22I	TGATCA	3 cut(s)	855, 910, 1746
KspAI	GTTAAC	1 cut(s)	723
KspI	CCGCGG	1 cut(s)	580
LguI	GCTCTTC	1 cut(s)	293
LmnI	GCTCC	9 cut(s)	146, 209, 318, 333, 334, 485, 514, 780, 1147
Lsp1109I	GCAGC	6 cut(s)	511, 1214, 1364, 1801, 2155, 2158
LweI	GCATC	6 cut(s)	165, 792, 1069, 1096, 1364, 1690
MaeI	CTAG	4 cut(s)	53, 1488, 1818, 2076
MaeIII	GTNAC	9 cut(s)	371, 460, 491, 1128, 1169, 1330, 1555, 1882, 2111
MboII	GAAGA	5 cut(s)	55, 280, 373, 1958, 2057
MflI	RGATCY	1 cut(s)	2149
MhlI	GDGCHC	3 cut(s)	143, 330, 339
MlsI	TGGCCA	1 cut(s)	638
MluCI	AATT	5 cut(s)	931, 938, 1736, 1875, 2098
MluNI	TGGCCA	1 cut(s)	638
MlyI	GAGTC	1 cut(s)	2122
MmeI	TCCRAC	4 cut(s)	129, 231, 1405, 1500
Mox20I	TGGCCA	1 cut(s)	638
MroNI	GCCGGC	1 cut(s)	1109
MscI	TGGCCA	1 cut(s)	638
MseI	TTAA	7 cut(s)	660, 722, 1092, 1155, 1419, 1710, 2182
MslI	CAYNNNNRTG	1 cut(s)	1442
Msp20I	TGGCCA	1 cut(s)	638
MspA1I	CMGCKG	3 cut(s)	524, 579, 1205
MspI	CCGG	7 cut(s)	477, 881, 982, 1001, 1008, 1110, 1803
MspR9I	CCNGG	9 cut(s)	136, 332, 740, 961, 982, 983, 1001, 1009, 1803
Mva1269I	GAATGC	1 cut(s)	1143
MvaI	CCWGG	4 cut(s)	136, 332, 740, 961
MvnI	CGCG	6 cut(s)	89, 184, 284, 311, 579, 1168
MwoI	GCNNNNNNNGC	7 cut(s)	334, 514, 886, 1147, 1260, 1361, 2177
NaeI	GCCGGC	1 cut(s)	1111
NciI	CCSGG	5 cut(s)	982, 983, 1001, 1009, 1803
NgoMIV	GCCGGC	1 cut(s)	1109
NheI	GCTAGC	1 cut(s)	1817
NlaIII	CATG	5 cut(s)	706, 1069, 1237, 1306, 1474
NmeAIII	GCCGAG	1 cut(s)	915
NmuCI	GTSAC	4 cut(s)	371, 460, 1330, 1555
NspI	RCATGY	1 cut(s)	706
PceI	AGGCCT	1 cut(s)	395
PciSI	GCTCTTC	1 cut(s)	293
PcsI	WCGNNNNNNNCGW	5 cut(s)	411, 435, 1533, 1551, 1731
PctI	GAATGC	1 cut(s)	1143
PdiI	GCCGGC	1 cut(s)	1111
PfeI	GAWTC	4 cut(s)	15, 1498, 1612, 1643
Pfl23II	CGTACG	2 cut(s)	96, 563
PflFI	GACNNNGTC	1 cut(s)	451
PflMI	CCANNNNNTGG	1 cut(s)	624
PfoI	TCCNGGA	1 cut(s)	330
Ple19I	CGATCG	1 cut(s)	570
PleI	GAGTC	1 cut(s)	2122
PmaCI	CACGTG	2 cut(s)	410, 1744
PmlI	CACGTG	2 cut(s)	410, 1744
PpsI	GAGTC	1 cut(s)	2122
Ppu21I	YACGTR	2 cut(s)	410, 1744
PpuMI	RGGWCCY	1 cut(s)	997
Psp124BI	GAGCTC	1 cut(s)	330
Psp1406I	AACGTT	2 cut(s)	1527, 2139
Psp5II	RGGWCCY	1 cut(s)	997
Psp6I	CCWGG	4 cut(s)	134, 330, 738, 959
PspCI	CACGTG	2 cut(s)	410, 1744
PspEI	GGTNACC	5 cut(s)	371, 460, 491, 1330, 1882
PspGI	CCWGG	4 cut(s)	134, 330, 738, 959
PspLI	CGTACG	2 cut(s)	96, 563
PspPI	GGNCC	8 cut(s)	72, 595, 834, 887, 984, 997, 1069, 1975
PspPPI	RGGWCCY	1 cut(s)	997
PsuI	RGATCY	1 cut(s)	2149
PsyI	GACNNNGTC	1 cut(s)	451
PvuI	CGATCG	1 cut(s)	570
PvuII	CAGCTG	1 cut(s)	1205
RsaI	GTAC	8 cut(s)	98, 565, 629, 821, 1031, 1088, 1790, 2012
RsaNI	GTAC	8 cut(s)	97, 564, 628, 820, 1030, 1087, 1789, 2011
RseI	CAYNNNNRTG	1 cut(s)	1442
SacI	GAGCTC	1 cut(s)	330
SacII	CCGCGG	1 cut(s)	580
SalI	GTCGAC	4 cut(s)	413, 440, 572, 1382
SapI	GCTCTTC	1 cut(s)	293
SaqAI	TTAA	7 cut(s)	660, 722, 1092, 1155, 1419, 1710, 2182
Sau96I	GGNCC	8 cut(s)	72, 595, 834, 887, 984, 997, 1069, 1975
SchI	GAGTC	1 cut(s)	2122
ScrFI	CCNGG	9 cut(s)	136, 332, 740, 961, 982, 983, 1001, 1009, 1803
SduI	GDGCHC	3 cut(s)	143, 330, 339
SfaNI	GCATC	6 cut(s)	165, 792, 1069, 1096, 1364, 1690
SfcI	CTRYAG	2 cut(s)	870, 1782
Sfr303I	CCGCGG	1 cut(s)	580
SgrBI	CCGCGG	1 cut(s)	580
SinI	GGWCC	5 cut(s)	72, 595, 997, 1069, 1975
SmaI	CCCGGG	1 cut(s)	983
SmiMI	CAYNNNNRTG	1 cut(s)	1442
SmlI	CTYRAG	1 cut(s)	542
SmoI	CTYRAG	1 cut(s)	542
Sse9I	AATT	5 cut(s)	931, 938, 1736, 1875, 2098
SseBI	AGGCCT	1 cut(s)	395
SspMI	CTAG	4 cut(s)	53, 1488, 1818, 2076
SstI	GAGCTC	1 cut(s)	330
StuI	AGGCCT	1 cut(s)	395
StyD4I	CCNGG	9 cut(s)	134, 330, 738, 959, 980, 981, 999, 1007, 1801
StyI	CCWWGG	3 cut(s)	681, 1335, 1649
TaqII	GACCGA	1 cut(s)	1992
TasI	AATT	5 cut(s)	931, 938, 1736, 1875, 2098
TatI	WGTACW	1 cut(s)	1029
TauI	GCSGC	6 cut(s)	94, 189, 803, 1153, 1202, 1279
TfiI	GAWTC	4 cut(s)	15, 1498, 1612, 1643
Tru1I	TTAA	7 cut(s)	660, 722, 1092, 1155, 1419, 1710, 2182
Tru9I	TTAA	7 cut(s)	660, 722, 1092, 1155, 1419, 1710, 2182
TscAI	CASTG	2 cut(s)	674, 1816
TseFI	GTSAC	4 cut(s)	371, 460, 1330, 1555
TseI	GCWGC	6 cut(s)	524, 1202, 1352, 1814, 2168, 2171
Tsp45I	GTSAC	4 cut(s)	371, 460, 1330, 1555
TspDTI	ATGAA	4 cut(s)	1487, 1553, 1619, 2015
TspGWI	ACGGA	3 cut(s)	310, 1419, 1783
TspMI	CCCGGG	1 cut(s)	981
TspRI	CASTG	2 cut(s)	674, 1816
Tth111I	GACNNNGTC	1 cut(s)	451
Van91I	CCANNNNNTGG	1 cut(s)	624
VpaK11BI	GGWCC	5 cut(s)	72, 595, 997, 1069, 1975
XapI	RAATTY	3 cut(s)	938, 1736, 1875
XceI	RCATGY	1 cut(s)	706
XcmI	CCANNNNNNNNNTGG	1 cut(s)	754
XmaI	CCCGGG	1 cut(s)	981
XmiI	GTMKAC	5 cut(s)	414, 441, 573, 1383, 1929
XspI	CTAG	4 cut(s)	53, 1488, 1818, 2076

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.