AT4G19450
ERF Family

Nodulin-like (InterPro IPR010658), Major facilitator superfamily, general substrate transporter (InterPro IPR016196)

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
10606324 .. 10609391
3068 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G19450.1

Sequence Viewer

Length: 1719 bp
ATGGCGGGACAGTCACGAAAATGGATGATACTGGTGGCGACGATATGGATTCAAGCTTTCACCGGGACGAATTTCGATTTCTCAGCTTACTCGTCAGATTTGAAATCGGTTCTAGGGATTTCACAGGTGCAGCTAAACTACCTCGCCGTGGCTTCGGATCTCGGAAAAGTATTCGGATGGTCGTCGGGACTAGCGCTTATGTATTTCCCGCTTTGGACGGTGCTTTTCGCGGCGGCGTTTATGGGATTCGTCGGTTATGGAGTTCAGTGGCTTGTCATCACTCATTTCATCTCTTTGCCTTATATCATGGTGTTTCTCTGTTGCTTACTTGCTGGTTTAAGTATCTGTTGGTTCAACACTGTCTGCTTTGTGCTCTGCATTAGTAACTTCCCTGCAAACAGATCACTTGCTCTTTCCCTCACAGTGAGTTTCAATGGTGTAAGCGCTGCTTTATATACTCTTGCTTACAACGCAATCAATCCAACTTCTCCAGAGCTATATCTTCTTTTGAACGCTCTTATACCGCTCATTGTCTCTTTCACTGCTATCATCCCGATTCTTCGTCAACCGCCTTTTGAGCCTCTTCCACCAGATGGAGTTCGTCGTGACTCTCTCATGTTTCTATTGCTCAACATACTCGCTGCTTTAAACGGTGTTTATCTCCTTCTCTTTGGATCAAACTCCTCTGATTTAACCTCTGCTCGTCTACTCTTTGGTGGAGCAATCCTCCTCTTGGTATTCCCTTTATGTATTCCCGGTTTAGTCATCGCCCGGAATTGGTATAACCGCACAATCCACACTAGTTTCCGTCTAGAAGGTTCTGGTTTCATTCTTGTTGATCCTGATGAGCTTGAGTTGCATAAAGGGATGCTTGCACATGAAGCAAACCGTGAAGGTTACCAATTGCTGAGTGACGATGTGGTGCAAAACCCGGTTAAGTCCGTAGCTGTTGAGGAAGAGGATAGTGATGAGTCATGTTGCAAGAAACTTATCACAAGAGATCAGCTTGAAGGTTTGGGGATTGAACATTCTTTGTCGCTGCTCTTAACCAGATCAGATTTTTGGTTATACTATATCACGTACTTCTGCGGTGGAACCATTGGACTTGTGTACAGCAACAACCTTGGACAGATTGCTCAATCTTTAGGACAAAGCTCAAATACCACAACTCTTGTCACACTTTATTCTGCTTTCTCATTCTTTGGAAGATTGCTTTCTGCAACACCAGATTATATCCGAGCGAAGGTTTATTTTGCCAGAACCGGGTGGTTAGCAATCGCGCTATTACCAACCCCCTTCGCACTTTTCTTGCTTGCATCATCAGGAACTGCATCAGCATTACAAGCTGGAACAGCGCTGATGGGTTTAAGCTCCGGGTTTATCTTTGCAGCAGCGGTTTCCATCACATCAGAGCTTTTTGGACCAAACAGTGTTGGAGTTAACCACAATATCTTAATCACAAACATACCGATAGGATCATTGATCTATGGATTCTTGGCTGCATTGGTCTATGACTCACATGGTTTCACCGGGACCAAATCAATGACCTCGGAGTCGGTGGTGTGTATGGGACGAGATTGTTATTACTTGACCTTTGTGTGGTGGGGTTGCTTGTCTCTTCTTGGGCTAGGTTCGAGTCTTGTGTTGTTTATTAGAACTAGACGAGCTTATCAACGGTTTGAACAAGCTCGTATAAGTTCGAACATCAACGACTCTTAG

Protein Analysis

572

Amino Acids

62.6

Weight (kDa)

5.99

Isoelectric Point (pI)

35.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nodulin-like PF06813 7 - 252 6.5e-93 Nodulin-like
NFD4_C PF23262 342 - 557 1.3e-49 NFD4, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1552
AccB7I CCANNNNNTGG 1 cut(s) 593
AccBSI CCGCTC 1 cut(s) 526
AccI GTMKAC 1 cut(s) 706
AccII CGCG 2 cut(s) 230, 1280
AciI CCGC 9 cut(s) 5, 209, 230, 233, 524, 569, 787, 1089, 1394
AclWI GGATC 4 cut(s) 165, 682, 833, 1483
AcsI RAATTY 1 cut(s) 70
AfaI GTAC 2 cut(s) 1082, 1112
AfeI AGCGCT 3 cut(s) 195, 445, 1356
AfiI CCNNNNNNNGG 7 cut(s) 148, 593, 733, 777, 1243, 1263, 1599
AgsI TTSAA 8 cut(s) 53, 103, 355, 433, 511, 1010, 1025, 1682
AhlI ACTAGT 1 cut(s) 800
Alw21I GWGCWC 1 cut(s) 375
Alw26I GTCTC 2 cut(s) 538, 1620
AlwI GGATC 4 cut(s) 165, 682, 833, 1483
AlwNI CAGNNNCTG 1 cut(s) 1328
Aor51HI AGCGCT 3 cut(s) 195, 445, 1356
ApeKI GCWGC 7 cut(s) 130, 446, 641, 1039, 1388, 1391, 1499
ApoI RAATTY 1 cut(s) 70
AspLEI GCGC 4 cut(s) 196, 446, 1282, 1357
AspS9I GGNCC 2 cut(s) 1421, 1533
AsuC2I CCSGG 7 cut(s) 64, 756, 772, 932, 1264, 1375, 1531
AsuHPI GGTGA 2 cut(s) 52, 1519
AsuII TTCGAA 1 cut(s) 1700
AvaII GGWCC 2 cut(s) 1421, 1533
Bbv12I GWGCWC 1 cut(s) 375
BbvI GCAGC 7 cut(s) 142, 433, 628, 1026, 1400, 1403, 1486
BccI CCATC 4 cut(s) 171, 587, 1354, 1409
BceAI ACGGC 1 cut(s) 131
BcnI CCSGG 7 cut(s) 64, 756, 772, 932, 1264, 1375, 1531
BcoDI GTCTC 2 cut(s) 538, 1620
BcuI ACTAGT 1 cut(s) 800
BfaI CTAG 6 cut(s) 113, 191, 801, 812, 1628, 1659
BfoI RGCGCY 3 cut(s) 197, 447, 1358
BisI GCNGC 9 cut(s) 131, 231, 234, 447, 642, 1040, 1389, 1392, 1500
BlsI GCNGC 9 cut(s) 132, 232, 235, 448, 643, 1041, 1390, 1393, 1501
Bme1390I CCNGG 7 cut(s) 64, 756, 772, 932, 1264, 1375, 1531
Bme18I GGWCC 2 cut(s) 1421, 1533
BmgT120I GGNCC 2 cut(s) 1421, 1533
BmiI GGNNCC 2 cut(s) 1096, 1534
BmrFI CCNGG 7 cut(s) 64, 756, 772, 932, 1264, 1375, 1531
BmsI GCATC 3 cut(s) 858, 1325, 1340
BplI GAGNNNNNCTC 2 cut(s) 711, 743
BpmI CTGGAG 1 cut(s) 474
Bpu14I TTCGAA 1 cut(s) 1700
BpuEI CTTGAG 1 cut(s) 872
BpuMI CCSGG 7 cut(s) 64, 756, 772, 932, 1264, 1375, 1531
BsaAI YACGTR 1 cut(s) 1080
BsaJI CCNNGG 3 cut(s) 147, 1123, 1548
Bsc4I CCNNNNNNNGG 7 cut(s) 148, 593, 733, 777, 1243, 1263, 1599
Bse1I ACTGG 1 cut(s) 36
BseDI CCNNGG 3 cut(s) 147, 1123, 1548
BseGI GGATG 4 cut(s) 30, 182, 549, 873
BseLI CCNNNNNNNGG 7 cut(s) 148, 593, 733, 777, 1243, 1263, 1599
BseMII CTCAG 2 cut(s) 96, 899
BseNI ACTGG 1 cut(s) 36
BseRI GAGGAG 2 cut(s) 673, 719
BseXI GCAGC 7 cut(s) 142, 433, 628, 1026, 1400, 1403, 1486
BsgI GTGCAG 1 cut(s) 149
Bsh1236I CGCG 2 cut(s) 230, 1280
BsiHKAI GWGCWC 1 cut(s) 375
BsiSI CCGG 7 cut(s) 63, 756, 772, 932, 1263, 1374, 1530
BslFI GGGAC 5 cut(s) 21, 79, 201, 1546, 1584
BslI CCNNNNNNNGG 7 cut(s) 148, 593, 733, 777, 1243, 1263, 1599
BsmAI GTCTC 2 cut(s) 538, 1620
BsmFI GGGAC 5 cut(s) 21, 79, 201, 1546, 1584
Bsp119I TTCGAA 1 cut(s) 1700
Bsp1286I GDGCHC 1 cut(s) 375
Bsp1407I TGTACA 1 cut(s) 1110
Bsp143I GATC 8 cut(s) 157, 401, 674, 838, 1000, 1052, 1475, 1482
BspACI CCGC 9 cut(s) 5, 209, 230, 233, 524, 569, 787, 1089, 1394
BspCNI CTCAG 2 cut(s) 95, 900
BspFNI CGCG 2 cut(s) 230, 1280
BspLI GGNNCC 2 cut(s) 1096, 1534
BspPI GGATC 4 cut(s) 165, 682, 833, 1483
BspT104I TTCGAA 1 cut(s) 1700
BsrBI CCGCTC 1 cut(s) 526
BsrGI TGTACA 1 cut(s) 1110
BsrI ACTGG 1 cut(s) 36
BssECI CCNNGG 3 cut(s) 147, 1123, 1548
BssMI GATC 8 cut(s) 157, 401, 674, 838, 1000, 1052, 1475, 1482
BssT1I CCWWGG 1 cut(s) 1123
Bst4CI ACNGT 8 cut(s) 12, 220, 361, 424, 653, 890, 1430, 1677
Bst6I CTCTTC 3 cut(s) 588, 951, 1623
BstAUI TGTACA 1 cut(s) 1110
BstBAI YACGTR 1 cut(s) 1080
BstBI TTCGAA 1 cut(s) 1700
BstC8I GCNNGC 2 cut(s) 873, 1314
BstDEI CTNAG 3 cut(s) 82, 908, 1716
BstDSI CCRYGG 1 cut(s) 147
BstEII GGTNACC 1 cut(s) 896
BstF5I GGATG 4 cut(s) 30, 182, 549, 873
BstFNI CGCG 2 cut(s) 230, 1280
BstH2I RGCGCY 3 cut(s) 197, 447, 1358
BstHHI GCGC 4 cut(s) 196, 446, 1282, 1357
BstKTI GATC 8 cut(s) 160, 404, 677, 841, 1003, 1055, 1478, 1485
BstMAI GTCTC 2 cut(s) 538, 1620
BstMBI GATC 8 cut(s) 157, 401, 674, 838, 1000, 1052, 1475, 1482
BstMWI GCNNNNNNNGC 6 cut(s) 470, 577, 856, 881, 1343, 1352
BstPI GGTNACC 1 cut(s) 896
BstSCI CCNGG 7 cut(s) 62, 754, 770, 930, 1262, 1373, 1529
BstUI CGCG 2 cut(s) 230, 1280
BstV1I GCAGC 7 cut(s) 142, 433, 628, 1026, 1400, 1403, 1486
BstX2I RGATCY 1 cut(s) 157
BstYI RGATCY 1 cut(s) 157
BtgI CCRYGG 1 cut(s) 147
BtgZI GCGATG 1 cut(s) 751
BtsCI GGATG 4 cut(s) 30, 182, 549, 873
BtsI GCAGTG 1 cut(s) 540
BtsIMutI CAGTG 5 cut(s) 272, 357, 429, 540, 1435
Cac8I GCNNGC 2 cut(s) 873, 1314
CaiI CAGNNNCTG 1 cut(s) 1328
CfoI GCGC 4 cut(s) 196, 446, 1282, 1357
Cfr13I GGNCC 2 cut(s) 1421, 1533
Csp6I GTAC 2 cut(s) 1081, 1111
CspCI CAANNNNNGTGG 2 cut(s) 1153, 1188
CviAII CATG 5 cut(s) 307, 616, 878, 975, 1520
CviQI GTAC 2 cut(s) 1081, 1111
DdeI CTNAG 3 cut(s) 82, 908, 1716
DpnI GATC 8 cut(s) 159, 403, 676, 840, 1002, 1054, 1477, 1484
DpnII GATC 8 cut(s) 157, 401, 674, 838, 1000, 1052, 1475, 1482
DraI TTTAAA 1 cut(s) 648
DrdI GACNNNNNNGTC 1 cut(s) 1552
DseDI GACNNNNNNGTC 1 cut(s) 1552
Eam1104I CTCTTC 3 cut(s) 588, 951, 1623
EarI CTCTTC 3 cut(s) 588, 951, 1623
Eco130I CCWWGG 1 cut(s) 1123
Eco47I GGWCC 2 cut(s) 1421, 1533
Eco47III AGCGCT 3 cut(s) 195, 445, 1356
Eco91I GGTNACC 1 cut(s) 896
EcoO65I GGTNACC 1 cut(s) 896
EcoT14I CCWWGG 1 cut(s) 1123
ErhI CCWWGG 1 cut(s) 1123
FaeI CATG 5 cut(s) 310, 619, 881, 978, 1523
FalI AAGNNNNNCTT 4 cut(s) 433, 465, 855, 887
FaqI GGGAC 5 cut(s) 21, 79, 201, 1546, 1584
FatI CATG 5 cut(s) 306, 615, 877, 974, 1519
FauI CCCGC 1 cut(s) 216
FblI GTMKAC 1 cut(s) 706
Fnu4HI GCNGC 9 cut(s) 131, 231, 234, 447, 642, 1040, 1389, 1392, 1500
FokI GGATG 4 cut(s) 37, 189, 536, 880
Fsp4HI GCNGC 9 cut(s) 131, 231, 234, 447, 642, 1040, 1389, 1392, 1500
FspBI CTAG 6 cut(s) 113, 191, 801, 812, 1628, 1659
GlaI GCGC 4 cut(s) 195, 445, 1281, 1356
GluI GCNGC 9 cut(s) 131, 231, 234, 447, 642, 1040, 1389, 1392, 1500
GsuI CTGGAG 1 cut(s) 474
HaeII RGCGCY 3 cut(s) 197, 447, 1358
HapII CCGG 7 cut(s) 63, 756, 772, 932, 1263, 1374, 1530
HhaI GCGC 4 cut(s) 196, 446, 1282, 1357
Hin1II CATG 5 cut(s) 310, 619, 881, 978, 1523
Hin6I GCGC 4 cut(s) 194, 444, 1280, 1355
HinP1I GCGC 4 cut(s) 194, 444, 1280, 1355
HincII GTYRAC 2 cut(s) 566, 1441
HindII GTYRAC 2 cut(s) 566, 1441
HindIII AAGCTT 1 cut(s) 54
HpaI GTTAAC 1 cut(s) 1441
HpaII CCGG 7 cut(s) 63, 756, 772, 932, 1263, 1374, 1530
HphI GGTGA 2 cut(s) 52, 1519
Hpy166II GTNNAC 4 cut(s) 566, 707, 1111, 1441
Hpy188I TCNGA 9 cut(s) 97, 157, 164, 176, 688, 1057, 1238, 1411, 1552
Hpy188III TCNNGA 8 cut(s) 15, 186, 491, 553, 605, 812, 842, 1323
Hpy8I GTNNAC 4 cut(s) 566, 707, 1111, 1441
Hpy99I CGWCG 4 cut(s) 43, 187, 254, 606
HpyAV CCTTC 6 cut(s) 674, 809, 887, 1004, 1237, 1306
HpyCH4III ACNGT 8 cut(s) 12, 220, 361, 424, 653, 890, 1430, 1677
HpyCH4IV ACGT 1 cut(s) 1079
HpyF10VI GCNNNNNNNGC 6 cut(s) 470, 577, 856, 881, 1343, 1352
HpyF3I CTNAG 3 cut(s) 82, 908, 1716
HpySE526I ACGT 1 cut(s) 1079
Hsp92II CATG 5 cut(s) 310, 619, 881, 978, 1523
HspAI GCGC 4 cut(s) 194, 444, 1280, 1355
KspAI GTTAAC 1 cut(s) 1441
Kzo9I GATC 8 cut(s) 157, 401, 674, 838, 1000, 1052, 1475, 1482
LmnI GCTCC 2 cut(s) 719, 1376
Lsp1109I GCAGC 7 cut(s) 142, 433, 628, 1026, 1400, 1403, 1486
LweI GCATC 3 cut(s) 858, 1325, 1340
MaeI CTAG 6 cut(s) 113, 191, 801, 812, 1628, 1659
MaeII ACGT 1 cut(s) 1079
MaeIII GTNAC 6 cut(s) 12, 383, 605, 896, 911, 1174
MalI GATC 8 cut(s) 159, 403, 676, 840, 1002, 1054, 1477, 1484
MbiI CCGCTC 1 cut(s) 526
MboI GATC 8 cut(s) 157, 401, 674, 838, 1000, 1052, 1475, 1482
MboII GAAGA 6 cut(s) 494, 551, 575, 968, 1218, 1610
MfeI CAATTG 1 cut(s) 902
MflI RGATCY 1 cut(s) 157
MhlI GDGCHC 1 cut(s) 375
MluCI AATT 3 cut(s) 70, 775, 902
MlyI GAGTC 6 cut(s) 602, 980, 1508, 1562, 1645, 1706
MmeI TCCRAC 2 cut(s) 506, 1414
MseI TTAA 8 cut(s) 338, 647, 692, 936, 1046, 1367, 1440, 1454
MslI CAYNNNNRTG 1 cut(s) 19
MspA1I CMGCKG 1 cut(s) 1394
MspI CCGG 7 cut(s) 63, 756, 772, 932, 1263, 1374, 1530
MspR9I CCNGG 7 cut(s) 64, 756, 772, 932, 1264, 1375, 1531
MunI CAATTG 1 cut(s) 902
MvnI CGCG 2 cut(s) 230, 1280
MwoI GCNNNNNNNGC 6 cut(s) 470, 577, 856, 881, 1343, 1352
NciI CCSGG 7 cut(s) 64, 756, 772, 932, 1264, 1375, 1531
NdeII GATC 8 cut(s) 157, 401, 674, 838, 1000, 1052, 1475, 1482
NlaIII CATG 5 cut(s) 310, 619, 881, 978, 1523
NlaIV GGNNCC 2 cut(s) 1096, 1534
NmuCI GTSAC 4 cut(s) 12, 605, 911, 1174
NspV TTCGAA 1 cut(s) 1700
PfeI GAWTC 4 cut(s) 49, 246, 556, 1491
PflMI CCANNNNNTGG 1 cut(s) 593
PkrI GCNGC 9 cut(s) 132, 232, 235, 448, 643, 1041, 1390, 1393, 1501
PleI GAGTC 6 cut(s) 602, 979, 1508, 1561, 1644, 1706
PpsI GAGTC 6 cut(s) 602, 979, 1508, 1561, 1644, 1706
Ppu21I YACGTR 1 cut(s) 1080
PspEI GGTNACC 1 cut(s) 896
PspN4I GGNNCC 2 cut(s) 1096, 1534
PspPI GGNCC 2 cut(s) 1421, 1533
PstNI CAGNNNCTG 1 cut(s) 1328
PsuI RGATCY 1 cut(s) 157
RsaI GTAC 2 cut(s) 1082, 1112
RsaNI GTAC 2 cut(s) 1081, 1111
RseI CAYNNNNRTG 1 cut(s) 19
SaqAI TTAA 8 cut(s) 338, 647, 692, 936, 1046, 1367, 1440, 1454
SatI GCNGC 9 cut(s) 131, 231, 234, 447, 642, 1040, 1389, 1392, 1500
Sau3AI GATC 8 cut(s) 157, 401, 674, 838, 1000, 1052, 1475, 1482
Sau96I GGNCC 2 cut(s) 1421, 1533
SchI GAGTC 6 cut(s) 602, 980, 1508, 1562, 1645, 1706
ScrFI CCNGG 7 cut(s) 64, 756, 772, 932, 1264, 1375, 1531
SduI GDGCHC 1 cut(s) 375
SfaNI GCATC 3 cut(s) 858, 1325, 1340
SfuI TTCGAA 1 cut(s) 1700
SinI GGWCC 2 cut(s) 1421, 1533
SmiMI CAYNNNNRTG 1 cut(s) 19
SmlI CTYRAG 1 cut(s) 851
SmoI CTYRAG 1 cut(s) 851
SpeI ACTAGT 1 cut(s) 800
Sse9I AATT 3 cut(s) 70, 775, 902
SsiI CCGC 9 cut(s) 5, 209, 230, 233, 524, 569, 787, 1089, 1394
SspMI CTAG 6 cut(s) 113, 191, 801, 812, 1628, 1659
StyD4I CCNGG 7 cut(s) 62, 754, 770, 930, 1262, 1373, 1529
StyI CCWWGG 1 cut(s) 1123
TaaI ACNGT 8 cut(s) 12, 220, 361, 424, 653, 890, 1430, 1677
TaiI ACGT 1 cut(s) 1082
TaqI TCGA 3 cut(s) 75, 1634, 1700
TasI AATT 3 cut(s) 70, 775, 902
TatI WGTACW 1 cut(s) 1110
TauI GCSGC 2 cut(s) 233, 236
TfiI GAWTC 4 cut(s) 49, 246, 556, 1491
Tru1I TTAA 8 cut(s) 338, 647, 692, 936, 1046, 1367, 1440, 1454
Tru9I TTAA 8 cut(s) 338, 647, 692, 936, 1046, 1367, 1440, 1454
TscAI CASTG 5 cut(s) 272, 364, 429, 547, 1435
TseFI GTSAC 4 cut(s) 12, 605, 911, 1174
TseI GCWGC 7 cut(s) 130, 446, 641, 1039, 1388, 1391, 1499
Tsp45I GTSAC 4 cut(s) 12, 605, 911, 1174
TspDTI ATGAA 3 cut(s) 277, 817, 894
TspGWI ACGGA 2 cut(s) 797, 931
TspRI CASTG 5 cut(s) 272, 364, 429, 547, 1435
Van91I CCANNNNNTGG 1 cut(s) 593
VpaK11BI GGWCC 2 cut(s) 1421, 1533
XapI RAATTY 1 cut(s) 70
XbaI TCTAGA 1 cut(s) 811
XmiI GTMKAC 1 cut(s) 706
XspI CTAG 6 cut(s) 113, 191, 801, 812, 1628, 1659
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.