Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0002097

Physical Location & Seq

Genomic Coordinates Reverse (-)

2741393 .. 2747501

Gene Structure 6109 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1022100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1899 bp

ATGAGGCCACGTAGGGAGACGGAGAGACGCAAACCAAACAACGCAACCAGCAGCAACACACAACAACAACAACAACCGTCGTGGTGGTCTTTGCGGCGGGGAGGAGGCGCTGGCGCTGGCGCTGGCGGCTTTGACATTCCTAAACACCAAATATTTTTCGGGGCAATTCTGATGGCGGGGCAGTCGAGAAAATGGATGATTCTGGTGGCTACAATATGGATTCAGGCATTTACAGGGACGAACTTCGACTTCTCGTCGTATTCGTCGTCGTTGAAGTCGGTTCTGGGGATCTCGCAGGTGCAGTTGAATTACCTGGCAACGGCGTCTGATCTGGGCAAGGTGTTGGGGTGGTCGTCGGGGTTGGCTCTCATGTATCTTCCTCTCTGGGTTGTGCTGTTCATGTCCGCCTTTATGGGACTCATCGGTTACGGCATGCAGTGGCTTGTCATTCGCCAAATCATTTCCTTGCCATATATCCTGATATTTCTTCTGTGTTTGTTGGCTGGGTGTAGCATCTGTTGGTTCAACACCGTATGTTTCGTTCTTTGCATTCGGAACTTCCCAGCTAATCAACCCTTAGCAATATCACTCACAGTAAGCTTCAATGGTGTAAGTGCAGCCTTATACAACCTTGTAGCCGATGCAATTGACTCATCGTCAACTTCTTTATTTCTCTTTTTGAATGCTGTCATTCCCCTTGTCACTTCTGTAGCGGCATTGATCCCGATTCTCCGCCAACCCACTCTAGACCCTCTCCCACCTGATGGAGTTCGCCGCGACTCCCTCATATTTCTCATTTTGAATATCGTAGCTGTCCTAACTGGTGTTTACCTTCTTCTCTTTAGTTCAACCTCATTTGATGCACCAACAGCTCGTCTCCTCTTAGCCGGTGCCATTTTCCTACTCATTTTCCCTCTGTGTATACCTGGCATTGTCTACGCTAGAAGTTGGGTTCGTCGTGTCATCCATTCTAGGATCCGCTTTGAAGGCTGGGGCTTGGTTCTTGTTGATGTTGATGATCTTGAGCTTCATAAAGAGCTTCTTTCACGTGAGAACAGTATGAATTATGGGAATGGATCTGTTGGTCACCTCTTGAACAATAACGAAAGACCTCCTTCAACTTTGTCATTTAGACAGAAGAGCGGATATCATAGCACCGAAGGGTGTTGTGGGGCAATTGTGAGCAAAGATCAGTTGGTAATGCTTGGGGAAGACCACACAGCACGAGCGCTTGTACGAAGGCTCGATTTTTGGCTATACTACTTCGCGTATTTTTGTGGAGGTACTATTGGTCTTGTGTACAGCAACAATCTAGGGCAGATAGCTCAATCGTTAGGACAGAGCTCCAAGACTTCAACCCTTGTCACACTTTATTCATCATTTTCCTTCTTTGGCCGATTGCTATCAGCTGCACCAGACTACATACGTGCGAAATTTTATTTTGCAAGGACCGGATGGTTGACAATTGCACTTTTACCAACCCCAGTTGCCTTCTTGTTGCTAGCGTCATCAGGCAGCAGCTTGGCTTTGCACACAGGCACTGCACTAATCGGATTGAGCTCTGGATTCATTTTCGCAGCAGCTGTTTCAATCACATCGGAGCTCTTCGGGCCTAACAGCGTAGGTGTTAACCACAACATTCTTATTACCAACATACCAATTGGTTCGCTCGTCTATGGCTTTCTCGCAGCCATCGTTTATGATTCCAACGTGAGCTCTAACCTAAATATCTTAAGGACTGACTCGATTGTGTGCATGGGGAGGGACTGCTACTTCTTGACCTTTGTTTGGTGGGCATGCATATCGGTTCTTGGGTTAGGTTTAAGTGTGCTGTTATTCTTAAGAACCCGACATGCGTATGATCATTTTGAACATAATCGTTCAACACAACTCTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Nodulin-like PUCC

Protein Analysis

633

Amino Acids

69.44

Weight (kDa)

9.16

Isoelectric Point (pI)

40.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Nodulin-like	PF06813	64 - 309	3e-84	Nodulin-like
NFD4_C	PF23262	406 - 620	4.1e-50	NFD4, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002097)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G19450 AT4G19450 AT5G45275
fragaria_vesca	FvH4_5g24410 FvH4_5g24410 FvH4_5g24410 FvH4_5g24410 FvH4_7g07730 FvH4_7g07730 FvH4_7g07730 FvH4_7g07730 FvH4_7g07730
malus_domestica	MD02G1233200.v1.1 MD06G1022100.v1.1 MD07G1080400.v1.1 MD16G1287800.v1.1
prunus_persica	Prupe.2G104800_v2.0.a1 Prupe.5G016300_v2.0.a1
pyrus_communis	pycom06g01600 pycom07g06400
rosa_chinensis	RchiOBHm_Chr1g0342361 RchiOBHm_Chr7g0214811
rosa_laevigata	RLG00000002719 RLG00000002720 RLG00000029156
rosa_multiflora	Rmu_co8462433.1_g000001 Rmu_sc0002308.1_g000032 Rmu_sc0012155.1_g000010
rosa_roxburghii	Rroxscaffold_3G00245010 Rroxscaffold_4G00312980
rosa_rugosa	Rorug01G0151600.1 Rorug07G0147200 Rorug07G0147300 Rorug07G0147400
rosa_samantha	Rh1AG166000 Rh1BG132500 Rh1CG154600 Rh1DG167400 Rh7AG284200 Rh7BG275100 Rh7CG303600 Rh7DG287500
rosa_wichuraiana	Rw1G013870 Rw7G024250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	286
Acc36I	ACCTGC	1 cut(s)	286
AccB1I	GGYRCC	1 cut(s)	890
AccB7I	CCANNNNNTGG	1 cut(s)	764
AccBSI	CCGCTC	1 cut(s)	1143
AccI	GTMKAC	2 cut(s)	922, 936
AccII	CGCG	2 cut(s)	777, 1268
AclWI	GGATC	5 cut(s)	296, 715, 970, 983, 1084
AcoI	YGGCCR	1 cut(s)	1393
AcsI	RAATTY	1 cut(s)	1433
AcvI	CACGTG	1 cut(s)	1049
AcyI	GRCGYC	1 cut(s)	323
AfaI	GTAC	3 cut(s)	1236, 1285, 1301
AfeI	AGCGCT	1 cut(s)	1230
AfiI	CCNNNNNNNGG	3 cut(s)	319, 764, 1788
AflII	CTTAAG	2 cut(s)	1732, 1840
AhdI	GACNNNNNGTC	2 cut(s)	253, 655
AjnI	CCWGG	2 cut(s)	312, 925
Alw21I	GWGCWC	4 cut(s)	1346, 1562, 1605, 1718
Alw26I	GTCTC	3 cut(s)	11, 19, 881
AlwI	GGATC	5 cut(s)	296, 715, 970, 983, 1084
AlwNI	CAGNNNCTG	2 cut(s)	1541, 1583
Aor51HI	AGCGCT	1 cut(s)	1230
AoxI	GGCC	3 cut(s)	5, 1393, 1610
ApeKI	GCWGC	8 cut(s)	51, 617, 1409, 1515, 1518, 1577, 1580, 1688
ApoI	RAATTY	1 cut(s)	1433
AspLEI	GCGC	4 cut(s)	110, 116, 122, 1231
AspS9I	GGNCC	2 cut(s)	1449, 1610
AsuHPI	GGTGA	1 cut(s)	1079
AsuNHI	GCTAGC	1 cut(s)	1501
AvaII	GGWCC	1 cut(s)	1449
BamHI	GGATCC	1 cut(s)	975
BanI	GGYRCC	1 cut(s)	890
BanII	GRGCYC	4 cut(s)	1346, 1562, 1605, 1718
BauI	CACGAG	1 cut(s)	1224
BbrPI	CACGTG	1 cut(s)	1049
BbsI	GAAGAC	1 cut(s)	1218
Bbv12I	GWGCWC	4 cut(s)	1346, 1562, 1605, 1718
BbvI	GCAGC	8 cut(s)	63, 629, 1396, 1527, 1530, 1589, 1592, 1700
BccI	CCATC	4 cut(s)	166, 758, 1449, 1700
BceAI	ACGGC	2 cut(s)	336, 445
BcgI	CGANNNNNNTGC	2 cut(s)	1785, 1819
BciT130I	CCWGG	2 cut(s)	314, 927
BclI	TGATCA	1 cut(s)	1861
BcoDI	GTCTC	3 cut(s)	11, 19, 881
BfaI	CTAG	5 cut(s)	746, 942, 972, 1313, 1502
BfmI	CTRYAG	1 cut(s)	708
BfoI	RGCGCY	4 cut(s)	111, 117, 123, 1232
BfrI	CTTAAG	2 cut(s)	1732, 1840
BfuAI	ACCTGC	1 cut(s)	286
Bme1390I	CCNGG	2 cut(s)	314, 927
Bme18I	GGWCC	1 cut(s)	1449
BmeRI	GACNNNNNGTC	2 cut(s)	253, 655
BmgT120I	GGNCC	2 cut(s)	1449, 1610
BmiI	GGNNCC	2 cut(s)	892, 977
BmrFI	CCNGG	2 cut(s)	314, 927
BmrI	ACTGGG	1 cut(s)	1478
BmsI	GCATC	3 cut(s)	522, 631, 850
BmtI	GCTAGC	1 cut(s)	1505
BmuI	ACTGGG	1 cut(s)	1478
BpiI	GAAGAC	1 cut(s)	1218
Bpu10I	CCTNAGC	1 cut(s)	577
BpuEI	CTTGAG	1 cut(s)	1043
BsaAI	YACGTR	3 cut(s)	11, 1049, 1427
BsaBI	GATNNNNATC	1 cut(s)	1402
BsaHI	GRCGYC	1 cut(s)	323
BsaWI	WCCGGW	1 cut(s)	1451
Bsc4I	CCNNNNNNNGG	3 cut(s)	319, 764, 1788
Bse118I	RCCGGY	1 cut(s)	887
Bse1I	ACTGG	2 cut(s)	826, 1484
Bse8I	GATNNNNATC	1 cut(s)	1402
BseBI	CCWGG	2 cut(s)	314, 927
BseGI	GGATG	3 cut(s)	201, 963, 1460
BseJI	GATNNNNATC	1 cut(s)	1402
BseLI	CCNNNNNNNGG	3 cut(s)	319, 764, 1788
BseNI	ACTGG	2 cut(s)	826, 1484
BseRI	GAGGAG	2 cut(s)	117, 869
BseXI	GCAGC	8 cut(s)	63, 629, 1396, 1527, 1530, 1589, 1592, 1700
BseYI	CCCAGC	3 cut(s)	503, 562, 990
BsgI	GTGCAG	4 cut(s)	320, 636, 1395, 1527
Bsh1236I	CGCG	2 cut(s)	777, 1268
BshFI	GGCC	3 cut(s)	7, 1395, 1612
BshNI	GGYRCC	1 cut(s)	890
BsiHKAI	GWGCWC	4 cut(s)	1346, 1562, 1605, 1718
BsiSI	CCGG	2 cut(s)	888, 1452
BslFI	GGGAC	3 cut(s)	250, 429, 1778
BslI	CCNNNNNNNGG	3 cut(s)	319, 764, 1788
BsmAI	GTCTC	3 cut(s)	11, 19, 881
BsmBI	CGTCTC	3 cut(s)	11, 19, 881
BsmFI	GGGAC	3 cut(s)	250, 429, 1778
BsmI	GAATGC	2 cut(s)	549, 688
BsnI	GGCC	3 cut(s)	7, 1395, 1612
Bsp1286I	GDGCHC	4 cut(s)	1346, 1562, 1605, 1718
Bsp1407I	TGTACA	1 cut(s)	1299
Bsp143I	GATC	8 cut(s)	288, 328, 720, 975, 1018, 1076, 1189, 1861
BspANI	GGCC	3 cut(s)	7, 1395, 1612
BspFNI	CGCG	2 cut(s)	777, 1268
BspLI	GGNNCC	2 cut(s)	892, 977
BspMI	ACCTGC	1 cut(s)	286
BspOI	GCTAGC	1 cut(s)	1505
BspPI	GGATC	5 cut(s)	296, 715, 970, 983, 1084
BspQI	GCTCTTC	2 cut(s)	1133, 1610
BspT107I	GGYRCC	1 cut(s)	890
BspTI	CTTAAG	2 cut(s)	1732, 1840
BsrBI	CCGCTC	1 cut(s)	1143
BsrFI	RCCGGY	1 cut(s)	887
BsrGI	TGTACA	1 cut(s)	1299
BsrI	ACTGG	2 cut(s)	826, 1484
BssAI	RCCGGY	1 cut(s)	887
BssMI	GATC	8 cut(s)	288, 328, 720, 975, 1018, 1076, 1189, 1861
BssNAI	GTATAC	1 cut(s)	923
BssNI	GRCGYC	1 cut(s)	323
BssSI	CACGAG	1 cut(s)	1224
Bst1107I	GTATAC	1 cut(s)	923
Bst2BI	CACGAG	1 cut(s)	1224
Bst2UI	CCWGG	2 cut(s)	314, 927
Bst4CI	ACNGT	4 cut(s)	78, 532, 595, 1058
Bst6I	CTCTTC	2 cut(s)	1133, 1610
BstACI	GRCGYC	1 cut(s)	323
BstAFI	CTTAAG	2 cut(s)	1732, 1840
BstAUI	TGTACA	1 cut(s)	1299
BstBAI	YACGTR	3 cut(s)	11, 1049, 1427
BstC8I	GCNNGC	6 cut(s)	112, 118, 124, 434, 1503, 1798
BstDEI	CTNAG	2 cut(s)	577, 883
BstEII	GGTNACC	1 cut(s)	1085
BstF5I	GGATG	3 cut(s)	201, 963, 1460
BstFNI	CGCG	2 cut(s)	777, 1268
BstH2I	RGCGCY	4 cut(s)	111, 117, 123, 1232
BstHHI	GCGC	4 cut(s)	110, 116, 122, 1231
BstKTI	GATC	8 cut(s)	291, 331, 723, 978, 1021, 1079, 1192, 1864
BstMAI	GTCTC	3 cut(s)	11, 19, 881
BstMBI	GATC	8 cut(s)	288, 328, 720, 975, 1018, 1076, 1189, 1861
BstMWI	GCNNNNNNNGC	4 cut(s)	126, 869, 987, 1609
BstNI	CCWGG	2 cut(s)	314, 927
BstNSI	RCATGY	3 cut(s)	436, 1800, 1856
BstPI	GGTNACC	1 cut(s)	1085
BstSCI	CCNGG	2 cut(s)	312, 925
BstSFI	CTRYAG	1 cut(s)	708
BstUI	CGCG	2 cut(s)	777, 1268
BstV1I	GCAGC	8 cut(s)	63, 629, 1396, 1527, 1530, 1589, 1592, 1700
BstV2I	GAAGAC	1 cut(s)	1218
BstX2I	RGATCY	3 cut(s)	288, 975, 1076
BstYI	RGATCY	3 cut(s)	288, 975, 1076
BstZ17I	GTATAC	1 cut(s)	923
BsuRI	GGCC	3 cut(s)	7, 1395, 1612
BtsCI	GGATG	3 cut(s)	201, 963, 1460
BtsI	GCAGTG	2 cut(s)	443, 1539
BtsIMutI	CAGTG	2 cut(s)	443, 1539
BveI	ACCTGC	1 cut(s)	286
Cac8I	GCNNGC	6 cut(s)	112, 118, 124, 434, 1503, 1798
CaiI	CAGNNNCTG	2 cut(s)	1541, 1583
CfoI	GCGC	4 cut(s)	110, 116, 122, 1231
Cfr10I	RCCGGY	1 cut(s)	887
Cfr13I	GGNCC	2 cut(s)	1449, 1610
CseI	GACGC	3 cut(s)	36, 312, 1494
Csp6I	GTAC	3 cut(s)	1235, 1284, 1300
CspCI	CAANNNNNGTGG	2 cut(s)	62, 97
CviAII	CATG	6 cut(s)	370, 400, 433, 1756, 1797, 1853
CviQI	GTAC	3 cut(s)	1235, 1284, 1300
DdeI	CTNAG	2 cut(s)	577, 883
DpnI	GATC	8 cut(s)	290, 330, 722, 977, 1020, 1078, 1191, 1863
DpnII	GATC	8 cut(s)	288, 328, 720, 975, 1018, 1076, 1189, 1861
DriI	GACNNNNNGTC	2 cut(s)	253, 655
EaeI	YGGCCR	1 cut(s)	1393
Eam1104I	CTCTTC	2 cut(s)	1133, 1610
Eam1105I	GACNNNNNGTC	2 cut(s)	253, 655
EarI	CTCTTC	2 cut(s)	1133, 1610
EciI	GGCGGA	2 cut(s)	394, 722
Ecl136II	GAGCTC	4 cut(s)	1344, 1560, 1603, 1716
Eco24I	GRGCYC	4 cut(s)	1346, 1562, 1605, 1718
Eco32I	GATATC	1 cut(s)	1148
Eco47I	GGWCC	1 cut(s)	1449
Eco47III	AGCGCT	1 cut(s)	1230
Eco53kI	GAGCTC	4 cut(s)	1344, 1560, 1603, 1716
Eco72I	CACGTG	1 cut(s)	1049
Eco91I	GGTNACC	1 cut(s)	1085
EcoICRI	GAGCTC	4 cut(s)	1344, 1560, 1603, 1716
EcoO65I	GGTNACC	1 cut(s)	1085
EcoRII	CCWGG	2 cut(s)	312, 925
EcoRV	GATATC	1 cut(s)	1148
EcoT22I	ATGCAT	1 cut(s)	1802
EcoT38I	GRGCYC	4 cut(s)	1346, 1562, 1605, 1718
Esp3I	CGTCTC	3 cut(s)	11, 19, 881
FaeI	CATG	6 cut(s)	373, 403, 436, 1759, 1800, 1856
FalI	AAGNNNNNCTT	4 cut(s)	1026, 1058, 1099, 1131
FaqI	GGGAC	3 cut(s)	250, 429, 1778
FatI	CATG	6 cut(s)	369, 399, 432, 1755, 1796, 1852
FauI	CCCGC	2 cut(s)	90, 169
FbaI	TGATCA	1 cut(s)	1861
FblI	GTMKAC	2 cut(s)	922, 936
FokI	GGATG	3 cut(s)	208, 950, 1467
FriOI	GRGCYC	4 cut(s)	1346, 1562, 1605, 1718
FspBI	CTAG	5 cut(s)	746, 942, 972, 1313, 1502
GlaI	GCGC	4 cut(s)	109, 115, 121, 1230
GsaI	CCCAGC	3 cut(s)	507, 566, 994
HaeII	RGCGCY	4 cut(s)	111, 117, 123, 1232
HaeIII	GGCC	3 cut(s)	7, 1395, 1612
HapII	CCGG	2 cut(s)	888, 1452
HgaI	GACGC	3 cut(s)	36, 312, 1494
HhaI	GCGC	4 cut(s)	110, 116, 122, 1231
Hin1I	GRCGYC	1 cut(s)	323
Hin1II	CATG	6 cut(s)	373, 403, 436, 1759, 1800, 1856
Hin6I	GCGC	4 cut(s)	108, 114, 120, 1229
HinP1I	GCGC	4 cut(s)	108, 114, 120, 1229
HincII	GTYRAC	3 cut(s)	660, 1461, 1630
HindII	GTYRAC	3 cut(s)	660, 1461, 1630
HindIII	AAGCTT	1 cut(s)	598
HinfI	GANTC	9 cut(s)	199, 220, 417, 650, 727, 779, 1566, 1703, 1742
HpaI	GTTAAC	1 cut(s)	1630
HpaII	CCGG	2 cut(s)	888, 1452
HphI	GGTGA	1 cut(s)	1079
Hpy166II	GTNNAC	7 cut(s)	660, 829, 923, 937, 1300, 1461, 1630
Hpy188I	TCNGA	5 cut(s)	171, 328, 555, 1553, 1600
Hpy188III	TCNNGA	8 cut(s)	186, 478, 724, 746, 1022, 1093, 1563, 1777
Hpy8I	GTNNAC	7 cut(s)	660, 829, 923, 937, 1300, 1461, 1630
Hpy99I	CGWCG	6 cut(s)	82, 259, 268, 271, 358, 960
HpyAV	CCTTC	7 cut(s)	842, 980, 1125, 1154, 1233, 1396, 1501
HpyCH4III	ACNGT	4 cut(s)	78, 532, 595, 1058
HpyCH4IV	ACGT	4 cut(s)	10, 1048, 1426, 1710
HpyF10VI	GCNNNNNNNGC	4 cut(s)	126, 869, 987, 1609
HpyF3I	CTNAG	2 cut(s)	577, 883
HpySE526I	ACGT	4 cut(s)	10, 1048, 1426, 1710
Hsp92I	GRCGYC	1 cut(s)	323
Hsp92II	CATG	6 cut(s)	373, 403, 436, 1759, 1800, 1856
HspAI	GCGC	4 cut(s)	108, 114, 120, 1229
Ksp22I	TGATCA	1 cut(s)	1861
KspAI	GTTAAC	1 cut(s)	1630
Kzo9I	GATC	8 cut(s)	288, 328, 720, 975, 1018, 1076, 1189, 1861
LguI	GCTCTTC	2 cut(s)	1133, 1610
LmnI	GCTCC	2 cut(s)	1349, 1600
Lsp1109I	GCAGC	8 cut(s)	63, 629, 1396, 1527, 1530, 1589, 1592, 1700
LweI	GCATC	3 cut(s)	522, 631, 850
MaeI	CTAG	5 cut(s)	746, 942, 972, 1313, 1502
MaeII	ACGT	4 cut(s)	10, 1048, 1426, 1710
MaeIII	GTNAC	4 cut(s)	425, 700, 1085, 1363
MalI	GATC	8 cut(s)	290, 330, 722, 977, 1020, 1078, 1191, 1863
MbiI	CCGCTC	1 cut(s)	1143
MboI	GATC	8 cut(s)	288, 328, 720, 975, 1018, 1076, 1189, 1861
MboII	GAAGA	7 cut(s)	368, 479, 827, 1150, 1223, 1597, 1885
MfeI	CAATTG	4 cut(s)	645, 1176, 1464, 1659
MflI	RGATCY	3 cut(s)	288, 975, 1076
MhlI	GDGCHC	4 cut(s)	1346, 1562, 1605, 1718
MluCI	AATT	8 cut(s)	165, 307, 645, 1063, 1176, 1433, 1464, 1659
MlyI	GAGTC	4 cut(s)	411, 644, 773, 1736
MmeI	TCCRAC	1 cut(s)	1731
Mph1103I	ATGCAT	1 cut(s)	1802
MseI	TTAA	4 cut(s)	1629, 1733, 1823, 1841
MslI	CAYNNNNRTG	1 cut(s)	1857
MspA1I	CMGCKG	2 cut(s)	1409, 1583
MspCI	CTTAAG	2 cut(s)	1732, 1840
MspI	CCGG	2 cut(s)	888, 1452
MspR9I	CCNGG	2 cut(s)	314, 927
MunI	CAATTG	4 cut(s)	645, 1176, 1464, 1659
Mva1269I	GAATGC	2 cut(s)	549, 688
MvaI	CCWGG	2 cut(s)	314, 927
MvnI	CGCG	2 cut(s)	777, 1268
MwoI	GCNNNNNNNGC	4 cut(s)	126, 869, 987, 1609
NdeII	GATC	8 cut(s)	288, 328, 720, 975, 1018, 1076, 1189, 1861
NheI	GCTAGC	1 cut(s)	1501
NlaIII	CATG	6 cut(s)	373, 403, 436, 1759, 1800, 1856
NlaIV	GGNNCC	2 cut(s)	892, 977
NmuCI	GTSAC	3 cut(s)	700, 1085, 1363
NsiI	ATGCAT	1 cut(s)	1802
NspI	RCATGY	3 cut(s)	436, 1800, 1856
PaeI	GCATGC	2 cut(s)	436, 1800
PaqCI	CACCTGC	1 cut(s)	286
PciSI	GCTCTTC	2 cut(s)	1133, 1610
PcsI	WCGNNNNNNNCGW	3 cut(s)	260, 263, 1692
PctI	GAATGC	2 cut(s)	549, 688
PfeI	GAWTC	5 cut(s)	199, 220, 727, 1566, 1703
PflMI	CCANNNNNTGG	1 cut(s)	764
PleI	GAGTC	4 cut(s)	411, 644, 773, 1736
PmaCI	CACGTG	1 cut(s)	1049
PmlI	CACGTG	1 cut(s)	1049
PpsI	GAGTC	4 cut(s)	411, 644, 773, 1736
Ppu21I	YACGTR	3 cut(s)	11, 1049, 1427
Psp124BI	GAGCTC	4 cut(s)	1346, 1562, 1605, 1718
Psp6I	CCWGG	2 cut(s)	312, 925
PspCI	CACGTG	1 cut(s)	1049
PspEI	GGTNACC	1 cut(s)	1085
PspFI	CCCAGC	3 cut(s)	503, 562, 990
PspGI	CCWGG	2 cut(s)	312, 925
PspN4I	GGNNCC	2 cut(s)	892, 977
PspPI	GGNCC	2 cut(s)	1449, 1610
PsrI	GAACNNNNNNTAC	2 cut(s)	525, 557
PstNI	CAGNNNCTG	2 cut(s)	1541, 1583
PsuI	RGATCY	3 cut(s)	288, 975, 1076
PvuII	CAGCTG	2 cut(s)	1409, 1583
RsaI	GTAC	3 cut(s)	1236, 1285, 1301
RsaNI	GTAC	3 cut(s)	1235, 1284, 1300
RseI	CAYNNNNRTG	1 cut(s)	1857
SacI	GAGCTC	4 cut(s)	1346, 1562, 1605, 1718
SapI	GCTCTTC	2 cut(s)	1133, 1610
SaqAI	TTAA	4 cut(s)	1629, 1733, 1823, 1841
Sau3AI	GATC	8 cut(s)	288, 328, 720, 975, 1018, 1076, 1189, 1861
Sau96I	GGNCC	2 cut(s)	1449, 1610
SchI	GAGTC	4 cut(s)	411, 644, 773, 1736
ScrFI	CCNGG	2 cut(s)	314, 927
SduI	GDGCHC	4 cut(s)	1346, 1562, 1605, 1718
SfaNI	GCATC	3 cut(s)	522, 631, 850
SfcI	CTRYAG	1 cut(s)	708
SinI	GGWCC	1 cut(s)	1449
SmiMI	CAYNNNNRTG	1 cut(s)	1857
SmlI	CTYRAG	3 cut(s)	1022, 1732, 1840
SmoI	CTYRAG	3 cut(s)	1022, 1732, 1840
SphI	GCATGC	2 cut(s)	436, 1800
Sse9I	AATT	8 cut(s)	165, 307, 645, 1063, 1176, 1433, 1464, 1659
SspI	AATATT	1 cut(s)	153
SspMI	CTAG	5 cut(s)	746, 942, 972, 1313, 1502
SstI	GAGCTC	4 cut(s)	1346, 1562, 1605, 1718
StyD4I	CCNGG	2 cut(s)	312, 925
TaaI	ACNGT	4 cut(s)	78, 532, 595, 1058
TaiI	ACGT	4 cut(s)	13, 1051, 1429, 1713
TaqI	TCGA	4 cut(s)	185, 246, 1245, 1745
TasI	AATT	8 cut(s)	165, 307, 645, 1063, 1176, 1433, 1464, 1659
TatI	WGTACW	1 cut(s)	1299
TauI	GCSGC	4 cut(s)	97, 129, 716, 777
TfiI	GAWTC	5 cut(s)	199, 220, 727, 1566, 1703
Tru1I	TTAA	4 cut(s)	1629, 1733, 1823, 1841
Tru9I	TTAA	4 cut(s)	1629, 1733, 1823, 1841
TscAI	CASTG	2 cut(s)	443, 1546
TseFI	GTSAC	3 cut(s)	700, 1085, 1363
TseI	GCWGC	8 cut(s)	51, 617, 1409, 1515, 1518, 1577, 1580, 1688
Tsp45I	GTSAC	3 cut(s)	700, 1085, 1363
TspDTI	ATGAA	5 cut(s)	388, 1019, 1076, 1365, 1558
TspGWI	ACGGA	1 cut(s)	35
TspRI	CASTG	2 cut(s)	443, 1546
Van91I	CCANNNNNTGG	1 cut(s)	764
Vha464I	CTTAAG	2 cut(s)	1732, 1840
VpaK11BI	GGWCC	1 cut(s)	1449
XapI	RAATTY	1 cut(s)	1433
XbaI	TCTAGA	1 cut(s)	745
XceI	RCATGY	3 cut(s)	436, 1800, 1856
XmiI	GTMKAC	2 cut(s)	922, 936
XspI	CTAG	5 cut(s)	746, 942, 972, 1313, 1502
Zsp2I	ATGCAT	1 cut(s)	1802

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.