Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0002097

Physical Location & Seq

Genomic Coordinates Forward (+)

38521055 .. 38525774

Gene Structure 4720 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000002719

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1887 bp

ATGAGGCCACGTCGAGACCACTCCTCCTCCTCCTCCTCATCAGATAGACGTAACAAACCCATTAGCATTAACAGCGGCAGGGGCAGCCATAGCAATCCAAAGCCGCAGTCGTCGCAGCAAAAGGTTTCCCGGCGTACCAGTTACTACAAACTAGCGTTTCTCGTGTTCATGGCGGGTCAATCGAGGAAATGGATGATTCTGGTGGCGACGATATGGATTCAGGCATTCACCGGAACCAACTTCGATTTCTCGTCCTACTCGTCGGTGTTGAAATCCGTTATGGGGATTTCGCAGGTCCAGCTGAATTACTTGGCCACGGCCTCGGATTTGGGGAAGGTTTTCGGGTGGTCCTCCGGTTTGGCCTTGATGTACTTTCCTTTGTGGGTTGTGCTGTTCATGGCCGCCTTCATGGGGTTCGTCGGTTACGGACTTCAATGGCTCGTCATCCGCCAAATCATCGTCTTGCCTTATATCGTGATGTTTCTTCTGTGTTTGTTGGCTGGGTGTAGCATCTGTTGGTTCAACACAGTATGCTTCGTTCTTTGCATTCGGAATTTCCCGGCTAATCAACCCTTAGCAATATCACTCACAGTGAGCTTCAACGGTGTAAGTGCGGCCTTATACAACCTCGCTGCAGATGCAATTGACTCCTCTTCTACTTCTTTATATCTCATTTTGAATGCTGTCATTCCCCTTCTCACTTCTGTAGCAGCATTGATTCCGATTCTCCGACAACCCTCTCTCGACCCCCTTCCACCTGATGGAGTTCGTCGTGACTCCGTCATTTTTCTCTTTTTGAATATCCTAGCTGTTCTAACTGGCATTTACCTTCTTCTCTTTGGTTCGTCCTCTTTTGACACAGCAACTGCTCGCGTCTTCTTGGGTGGAGCCGTTTTCCTACTAATTTTCCCTTTGTGTATTCCTGGCATTGTCTATGCTCGGGACTGGTTTCGTCGTGCCATTCACTCTAACATCCGCATTGAAGGTTCAGGCTTCATTCTTGTCGATGTAGATGATCTAGAGCTTCACAAAGAGCTGCTGAGCCGCGAGCCTAGTATTCATGGGAACGGATCGCTTTCTCACCTTCTGGTCAGAAATGGTGCATCTGCTGAAAGTTTGTCATTTCGAAACAAGAGTGCAGTGTACACAGGGTGTTGTGGAACAATTGTGGGAAAGGATCAATTGGCAATGCTTGGAGAAGAGCACTCGGCAAGATTGCTTGTGAGCAGGTTGGATTTTTGGCTATACTACATTGCATACTTTTGTGGGGGTACCATTGGTCTTGTTTACAGTAACAATCTTGGACAGATAGCTCAATCACTAGGGCAGAGCTCCAATACCACAACACTAGTGACTCTCTATTCATCCTTCTCATTCTTTGGCCGGTTGCTATCAGCTGTACCAGACTACATACGAGCGAAGTTCTATTTTGCAAGGACAGGATGGCTAACGATAGCACTTTTGCCAACCCCTGTTGCTTTCATATTGCTTGCTGCATCAGGCAGTACCATGGCTTTGCATGCTGGCACTGCACTGATCGGATTGAGCTCTGGTTTCATTTTTGCTGCTGCTGTTTCCATTACATCAGAGTTGTTCGGGCCTAACAGCGTAGGTGTCAATCACAACATTCTGATTACAAACATACCACTCGGTTCACTTGTTTATGGTTTCCTAGCTGCAATTGTTTACGATGCCAATGTAAGCAGTGGCCTCAACATCTTAACAGCTGATACAATAGTGTGCATGGGGAGGAACTGCTATTTTCTAACATTTGTGTGGTGGGCGTGCATATCTGTTTTGGGGCTGGCGTCAAGTGTGCTCTTATTCTTAAGAACCAGACATGCCTATGACCATTTCGAGCATAATCGCTCTACGCAACTGTATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Nodulin-like PUCC

Protein Analysis

629

Amino Acids

68.72

Weight (kDa)

9.19

Isoelectric Point (pI)

41.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Nodulin-like	PF06813	63 - 308	8.4e-83	Nodulin-like
NFD4_C	PF23262	400 - 616	1.2e-48	NFD4, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002097)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G19450 AT4G19450 AT5G45275
fragaria_vesca	FvH4_5g24410 FvH4_5g24410 FvH4_5g24410 FvH4_5g24410 FvH4_7g07730 FvH4_7g07730 FvH4_7g07730 FvH4_7g07730 FvH4_7g07730
malus_domestica	MD02G1233200.v1.1 MD06G1022100.v1.1 MD07G1080400.v1.1 MD16G1287800.v1.1
prunus_persica	Prupe.2G104800_v2.0.a1 Prupe.5G016300_v2.0.a1
pyrus_communis	pycom06g01600 pycom07g06400
rosa_chinensis	RchiOBHm_Chr1g0342361 RchiOBHm_Chr7g0214811
rosa_laevigata	RLG00000002719 RLG00000002720 RLG00000029156
rosa_multiflora	Rmu_co8462433.1_g000001 Rmu_sc0002308.1_g000032 Rmu_sc0012155.1_g000010
rosa_roxburghii	Rroxscaffold_3G00245010 Rroxscaffold_4G00312980
rosa_rugosa	Rorug01G0151600.1 Rorug07G0147200 Rorug07G0147300 Rorug07G0147400
rosa_samantha	Rh1AG166000 Rh1BG132500 Rh1CG154600 Rh1DG167400 Rh7AG284200 Rh7BG275100 Rh7CG303600 Rh7DG287500
rosa_wichuraiana	Rw1G013870 Rw7G024250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	283, 1218
Acc65I	GGTACC	1 cut(s)	1271
AccB1I	GGYRCC	1 cut(s)	1271
AccB7I	CCANNNNNTGG	1 cut(s)	761
AccII	CGCG	2 cut(s)	873, 1047
AciI	CCGC	8 cut(s)	75, 104, 173, 402, 448, 614, 976, 1045
AclWI	GGATC	2 cut(s)	1078, 1185
AcoI	YGGCCR	3 cut(s)	312, 399, 1381
AcsI	RAATTY	1 cut(s)	553
AcyI	GRCGYC	1 cut(s)	1808
AdeI	CACNNNGTG	1 cut(s)	1152
AfaI	GTAC	6 cut(s)	136, 371, 1145, 1273, 1401, 1507
AfiI	CCNNNNNNNGG	3 cut(s)	282, 411, 761
AflII	CTTAAG	1 cut(s)	1828
AgsI	TTSAA	7 cut(s)	271, 434, 523, 601, 679, 799, 983
AhlI	ACTAGT	1 cut(s)	1348
AjiI	CACGTC	1 cut(s)	11
AjnI	CCWGG	1 cut(s)	922
AjuI	GAANNNNNNNTTGG	2 cut(s)	230, 262
Alw21I	GWGCWC	4 cut(s)	1206, 1334, 1550, 1821
Alw26I	GTCTC	1 cut(s)	9
AlwI	GGATC	2 cut(s)	1078, 1185
AlwNI	CAGNNNCTG	1 cut(s)	866
Ama87I	CYCGRG	1 cut(s)	939
AoxI	GGCC	9 cut(s)	5, 312, 318, 360, 399, 615, 1381, 1598, 1708
ApeKI	GCWGC	9 cut(s)	84, 115, 632, 710, 1036, 1493, 1565, 1568, 1676
ApoI	RAATTY	1 cut(s)	553
ArsI	GACNNNNNNTTYG	2 cut(s)	92, 124
Asp700I	GAANNNNTTC	1 cut(s)	338
Asp718I	GGTACC	1 cut(s)	1271
AspS9I	GGNCC	3 cut(s)	295, 348, 1598
AsuC2I	CCSGG	2 cut(s)	130, 560
AsuHPI	GGTGA	2 cut(s)	220, 1073
AsuII	TTCGAA	1 cut(s)	1126
AvaI	CYCGRG	1 cut(s)	939
AvaII	GGWCC	2 cut(s)	295, 348
BaeI	ACNNNNGTAYC	2 cut(s)	1722, 1755
BalI	TGGCCA	1 cut(s)	314
BanI	GGYRCC	1 cut(s)	1271
BanII	GRGCYC	2 cut(s)	1334, 1550
BauI	CACGAG	1 cut(s)	161
BbsI	GAAGAC	1 cut(s)	868
Bbv12I	GWGCWC	4 cut(s)	1206, 1334, 1550, 1821
BbvI	GCAGC	9 cut(s)	96, 127, 619, 722, 1023, 1480, 1552, 1555, 1663
BccI	CCATC	2 cut(s)	755, 1437
BceAI	ACGGC	2 cut(s)	333, 875
BciT130I	CCWGG	1 cut(s)	924
BcnI	CCSGG	2 cut(s)	130, 560
BcoDI	GTCTC	1 cut(s)	9
BcuI	ACTAGT	1 cut(s)	1348
BfaI	CTAG	7 cut(s)	152, 806, 1019, 1053, 1322, 1349, 1673
BfmI	CTRYAG	2 cut(s)	633, 705
BfrI	CTTAAG	1 cut(s)	1828
BfuAI	ACCTGC	2 cut(s)	283, 1218
BlpI	GCTNAGC	1 cut(s)	1040
Bme1390I	CCNGG	3 cut(s)	130, 560, 924
Bme18I	GGWCC	2 cut(s)	295, 348
BmeT110I	CYCGRG	1 cut(s)	939
BmgBI	CACGTC	1 cut(s)	11
BmgT120I	GGNCC	3 cut(s)	295, 348, 1598
BmiI	GGNNCC	3 cut(s)	235, 889, 1273
BmrFI	CCNGG	3 cut(s)	130, 560, 924
BmsI	GCATC	5 cut(s)	519, 628, 1112, 1505, 1681
BpiI	GAAGAC	1 cut(s)	868
Bpu10I	CCTNAGC	1 cut(s)	574
Bpu1102I	GCTNAGC	1 cut(s)	1040
Bpu14I	TTCGAA	1 cut(s)	1126
BpuMI	CCSGG	2 cut(s)	130, 560
BsaHI	GRCGYC	1 cut(s)	1808
BsaI	GGTCTC	1 cut(s)	9
BsaJI	CCNNGG	3 cut(s)	315, 321, 1509
BsaWI	WCCGGW	2 cut(s)	230, 353
BsaXI	ACNNNNNCTCC	4 cut(s)	8, 11, 38, 41
Bsc4I	CCNNNNNNNGG	3 cut(s)	282, 411, 761
Bse118I	RCCGGY	1 cut(s)	1383
Bse1I	ACTGG	3 cut(s)	138, 823, 950
Bse3DI	GCAATG	2 cut(s)	1194, 1251
BseBI	CCWGG	1 cut(s)	924
BseDI	CCNNGG	3 cut(s)	315, 321, 1509
BseGI	GGATG	5 cut(s)	198, 444, 972, 1364, 1448
BseLI	CCNNNNNNNGG	3 cut(s)	282, 411, 761
BseMI	GCAATG	2 cut(s)	1194, 1251
BseMII	CTCAG	1 cut(s)	1031
BseNI	ACTGG	3 cut(s)	138, 823, 950
BseRI	GAGGAG	6 cut(s)	13, 16, 19, 22, 25, 640
BseXI	GCAGC	9 cut(s)	96, 127, 619, 722, 1023, 1480, 1552, 1555, 1663
BseYI	CCCAGC	1 cut(s)	500
BsgI	GTGCAG	2 cut(s)	1158, 1515
Bsh1236I	CGCG	2 cut(s)	873, 1047
BshFI	GGCC	9 cut(s)	7, 314, 320, 362, 401, 617, 1383, 1600, 1710
BshNI	GGYRCC	1 cut(s)	1271
BsiHKAI	GWGCWC	4 cut(s)	1206, 1334, 1550, 1821
BsiHKCI	CYCGRG	1 cut(s)	939
BsiSI	CCGG	5 cut(s)	130, 231, 354, 560, 1384
BslFI	GGGAC	1 cut(s)	956
BslI	CCNNNNNNNGG	3 cut(s)	282, 411, 761
BsmAI	GTCTC	1 cut(s)	9
BsmFI	GGGAC	1 cut(s)	956
BsmI	GAATGC	3 cut(s)	224, 546, 685
BsnI	GGCC	9 cut(s)	7, 314, 320, 362, 401, 617, 1383, 1600, 1710
Bso31I	GGTCTC	1 cut(s)	9
BsoBI	CYCGRG	1 cut(s)	939
Bsp119I	TTCGAA	1 cut(s)	1126
Bsp1286I	GDGCHC	4 cut(s)	1206, 1334, 1550, 1821
Bsp1407I	TGTACA	1 cut(s)	1143
Bsp143I	GATC	4 cut(s)	1015, 1070, 1177, 1536
Bsp1720I	GCTNAGC	1 cut(s)	1040
Bsp19I	CCATGG	1 cut(s)	1509
BspACI	CCGC	8 cut(s)	75, 104, 173, 402, 448, 614, 976, 1045
BspANI	GGCC	9 cut(s)	7, 314, 320, 362, 401, 617, 1383, 1600, 1710
BspCNI	CTCAG	1 cut(s)	1032
BspFNI	CGCG	2 cut(s)	873, 1047
BspLI	GGNNCC	3 cut(s)	235, 889, 1273
BspMAI	CTGCAG	1 cut(s)	637
BspMI	ACCTGC	2 cut(s)	283, 1218
BspPI	GGATC	2 cut(s)	1078, 1185
BspQI	GCTCTTC	1 cut(s)	1194
BspT104I	TTCGAA	1 cut(s)	1126
BspT107I	GGYRCC	1 cut(s)	1271
BspTI	CTTAAG	1 cut(s)	1828
BspTNI	GGTCTC	1 cut(s)	9
BsrDI	GCAATG	2 cut(s)	1194, 1251
BsrFI	RCCGGY	1 cut(s)	1383
BsrGI	TGTACA	1 cut(s)	1143
BsrI	ACTGG	3 cut(s)	138, 823, 950
BssAI	RCCGGY	1 cut(s)	1383
BssECI	CCNNGG	3 cut(s)	315, 321, 1509
BssMI	GATC	4 cut(s)	1015, 1070, 1177, 1536
BssNI	GRCGYC	1 cut(s)	1808
BssSI	CACGAG	1 cut(s)	161
BssT1I	CCWWGG	1 cut(s)	1509
Bst2BI	CACGAG	1 cut(s)	161
Bst2UI	CCWGG	1 cut(s)	924
Bst4CI	ACNGT	5 cut(s)	529, 592, 605, 1292, 1881
Bst6I	CTCTTC	2 cut(s)	658, 1194
BstACI	GRCGYC	1 cut(s)	1808
BstAFI	CTTAAG	1 cut(s)	1828
BstAUI	TGTACA	1 cut(s)	1143
BstBI	TTCGAA	1 cut(s)	1126
BstC8I	GCNNGC	7 cut(s)	871, 1049, 1491, 1521, 1525, 1786, 1806
BstDEI	CTNAG	2 cut(s)	574, 1040
BstDSI	CCRYGG	2 cut(s)	315, 1509
BstF5I	GGATG	5 cut(s)	198, 444, 972, 1364, 1448
BstFNI	CGCG	2 cut(s)	873, 1047
BstKTI	GATC	4 cut(s)	1018, 1073, 1180, 1539
BstMAI	GTCTC	1 cut(s)	9
BstMBI	GATC	4 cut(s)	1015, 1070, 1177, 1536
BstMWI	GCNNNNNNNGC	9 cut(s)	72, 81, 84, 90, 112, 298, 638, 1520, 1529
BstNI	CCWGG	1 cut(s)	924
BstNSI	RCATGY	2 cut(s)	1523, 1844
BstSCI	CCNGG	3 cut(s)	128, 558, 922
BstSFI	CTRYAG	2 cut(s)	633, 705
BstUI	CGCG	2 cut(s)	873, 1047
BstV1I	GCAGC	9 cut(s)	96, 127, 619, 722, 1023, 1480, 1552, 1555, 1663
BstV2I	GAAGAC	1 cut(s)	868
BsuRI	GGCC	9 cut(s)	7, 314, 320, 362, 401, 617, 1383, 1600, 1710
BtgI	CCRYGG	2 cut(s)	315, 1509
BtrI	CACGTC	1 cut(s)	11
BtsCI	GGATG	5 cut(s)	198, 444, 972, 1364, 1448
BtsI	GCAGTG	3 cut(s)	1146, 1527, 1711
BtsIMutI	CAGTG	5 cut(s)	597, 1146, 1527, 1532, 1711
BveI	ACCTGC	2 cut(s)	283, 1218
Cac8I	GCNNGC	7 cut(s)	871, 1049, 1491, 1521, 1525, 1786, 1806
CaiI	CAGNNNCTG	1 cut(s)	866
Cfr10I	RCCGGY	1 cut(s)	1383
Cfr13I	GGNCC	3 cut(s)	295, 348, 1598
CseI	GACGC	2 cut(s)	862, 1797
Csp6I	GTAC	6 cut(s)	135, 370, 1144, 1272, 1400, 1506
CviAII	CATG	8 cut(s)	169, 397, 409, 1061, 1510, 1520, 1744, 1841
CviQI	GTAC	6 cut(s)	135, 370, 1144, 1272, 1400, 1506
DdeI	CTNAG	2 cut(s)	574, 1040
DpnI	GATC	4 cut(s)	1017, 1072, 1179, 1538
DpnII	GATC	4 cut(s)	1015, 1070, 1177, 1536
DraIII	CACNNNGTG	1 cut(s)	1152
EaeI	YGGCCR	3 cut(s)	312, 399, 1381
Eam1104I	CTCTTC	2 cut(s)	658, 1194
EarI	CTCTTC	2 cut(s)	658, 1194
EciI	GGCGGA	1 cut(s)	437
Ecl136II	GAGCTC	2 cut(s)	1332, 1548
Eco130I	CCWWGG	1 cut(s)	1509
Eco24I	GRGCYC	2 cut(s)	1334, 1550
Eco31I	GGTCTC	1 cut(s)	9
Eco47I	GGWCC	2 cut(s)	295, 348
Eco53kI	GAGCTC	2 cut(s)	1332, 1548
Eco88I	CYCGRG	1 cut(s)	939
EcoICRI	GAGCTC	2 cut(s)	1332, 1548
EcoRII	CCWGG	1 cut(s)	922
EcoT14I	CCWWGG	1 cut(s)	1509
EcoT38I	GRGCYC	2 cut(s)	1334, 1550
ErhI	CCWWGG	1 cut(s)	1509
FaeI	CATG	8 cut(s)	172, 400, 412, 1064, 1513, 1523, 1747, 1844
FaqI	GGGAC	1 cut(s)	956
FatI	CATG	8 cut(s)	168, 396, 408, 1060, 1509, 1519, 1743, 1840
FauI	CCCGC	1 cut(s)	166
FokI	GGATG	5 cut(s)	205, 431, 959, 1351, 1455
FriOI	GRGCYC	2 cut(s)	1334, 1550
FspBI	CTAG	7 cut(s)	152, 806, 1019, 1053, 1322, 1349, 1673
GsaI	CCCAGC	1 cut(s)	504
HaeIII	GGCC	9 cut(s)	7, 314, 320, 362, 401, 617, 1383, 1600, 1710
HapII	CCGG	5 cut(s)	130, 231, 354, 560, 1384
HgaI	GACGC	2 cut(s)	862, 1797
Hin1I	GRCGYC	1 cut(s)	1808
Hin1II	CATG	8 cut(s)	172, 400, 412, 1064, 1513, 1523, 1747, 1844
HinfI	GANTC	7 cut(s)	196, 217, 647, 718, 724, 776, 1354
HpaII	CCGG	5 cut(s)	130, 231, 354, 560, 1384
HphI	GGTGA	2 cut(s)	220, 1073
Hpy166II	GTNNAC	5 cut(s)	1144, 1146, 1288, 1655, 1687
Hpy188I	TCNGA	9 cut(s)	43, 325, 552, 723, 731, 1094, 1541, 1588, 1632
Hpy188III	TCNNGA	6 cut(s)	14, 475, 743, 773, 941, 1019
Hpy8I	GTNNAC	5 cut(s)	1144, 1146, 1288, 1655, 1687
Hpy99I	CGWCG	7 cut(s)	15, 115, 211, 265, 422, 774, 957
HpyAV	CCTTC	8 cut(s)	328, 415, 704, 761, 839, 977, 1094, 1378
HpyCH4III	ACNGT	5 cut(s)	529, 592, 605, 1292, 1881
HpyCH4IV	ACGT	2 cut(s)	10, 49
HpyF10VI	GCNNNNNNNGC	9 cut(s)	72, 81, 84, 90, 112, 298, 638, 1520, 1529
HpyF3I	CTNAG	2 cut(s)	574, 1040
HpySE526I	ACGT	2 cut(s)	10, 49
Hsp92I	GRCGYC	1 cut(s)	1808
Hsp92II	CATG	8 cut(s)	172, 400, 412, 1064, 1513, 1523, 1747, 1844
KpnI	GGTACC	1 cut(s)	1275
Kzo9I	GATC	4 cut(s)	1015, 1070, 1177, 1536
LguI	GCTCTTC	1 cut(s)	1194
LmnI	GCTCC	2 cut(s)	887, 1337
Lsp1109I	GCAGC	9 cut(s)	96, 127, 619, 722, 1023, 1480, 1552, 1555, 1663
LweI	GCATC	5 cut(s)	519, 628, 1112, 1505, 1681
MaeI	CTAG	7 cut(s)	152, 806, 1019, 1053, 1322, 1349, 1673
MaeII	ACGT	2 cut(s)	10, 49
MaeIII	GTNAC	6 cut(s)	50, 140, 422, 773, 1292, 1351
MalI	GATC	4 cut(s)	1017, 1072, 1179, 1538
MboI	GATC	4 cut(s)	1015, 1070, 1177, 1536
MboII	GAAGA	5 cut(s)	476, 645, 824, 868, 1211
MfeI	CAATTG	4 cut(s)	642, 1164, 1181, 1680
MhlI	GDGCHC	4 cut(s)	1206, 1334, 1550, 1821
MlsI	TGGCCA	1 cut(s)	314
MluCI	AATT	7 cut(s)	304, 553, 642, 903, 1164, 1181, 1680
MluNI	TGGCCA	1 cut(s)	314
MlyI	GAGTC	3 cut(s)	641, 770, 1348
MmeI	TCCRAC	2 cut(s)	754, 1212
Mox20I	TGGCCA	1 cut(s)	314
MroXI	GAANNNNTTC	1 cut(s)	338
MscI	TGGCCA	1 cut(s)	314
MseI	TTAA	3 cut(s)	69, 1721, 1829
MslI	CAYNNNNRTG	2 cut(s)	1774, 1845
Msp20I	TGGCCA	1 cut(s)	314
MspA1I	CMGCKG	4 cut(s)	75, 301, 1397, 1727
MspCI	CTTAAG	1 cut(s)	1828
MspI	CCGG	5 cut(s)	130, 231, 354, 560, 1384
MspR9I	CCNGG	3 cut(s)	130, 560, 924
MunI	CAATTG	4 cut(s)	642, 1164, 1181, 1680
Mva1269I	GAATGC	3 cut(s)	224, 546, 685
MvaI	CCWGG	1 cut(s)	924
MvnI	CGCG	2 cut(s)	873, 1047
MwoI	GCNNNNNNNGC	9 cut(s)	72, 81, 84, 90, 112, 298, 638, 1520, 1529
NciI	CCSGG	2 cut(s)	130, 560
NcoI	CCATGG	1 cut(s)	1509
NdeII	GATC	4 cut(s)	1015, 1070, 1177, 1536
NlaIII	CATG	8 cut(s)	172, 400, 412, 1064, 1513, 1523, 1747, 1844
NlaIV	GGNNCC	3 cut(s)	235, 889, 1273
NmeAIII	GCCGAG	1 cut(s)	1187
NmuCI	GTSAC	2 cut(s)	773, 1351
NspI	RCATGY	2 cut(s)	1523, 1844
NspV	TTCGAA	1 cut(s)	1126
PaeI	GCATGC	1 cut(s)	1523
PciSI	GCTCTTC	1 cut(s)	1194
PcsI	WCGNNNNNNNCGW	1 cut(s)	257
PctI	GAATGC	3 cut(s)	224, 546, 685
PdmI	GAANNNNTTC	1 cut(s)	338
PfeI	GAWTC	4 cut(s)	196, 217, 718, 724
PflFI	GACNNNGTC	1 cut(s)	779
PflMI	CCANNNNNTGG	1 cut(s)	761
PleI	GAGTC	3 cut(s)	641, 770, 1348
PpsI	GAGTC	3 cut(s)	641, 770, 1348
Psp124BI	GAGCTC	2 cut(s)	1334, 1550
Psp6I	CCWGG	1 cut(s)	922
PspFI	CCCAGC	1 cut(s)	500
PspGI	CCWGG	1 cut(s)	922
PspN4I	GGNNCC	3 cut(s)	235, 889, 1273
PspPI	GGNCC	3 cut(s)	295, 348, 1598
PsrI	GAACNNNNNNTAC	2 cut(s)	522, 554
PstI	CTGCAG	1 cut(s)	637
PstNI	CAGNNNCTG	1 cut(s)	866
PsyI	GACNNNGTC	1 cut(s)	779
PvuII	CAGCTG	3 cut(s)	301, 1397, 1727
RsaI	GTAC	6 cut(s)	136, 371, 1145, 1273, 1401, 1507
RsaNI	GTAC	6 cut(s)	135, 370, 1144, 1272, 1400, 1506
RseI	CAYNNNNRTG	2 cut(s)	1774, 1845
SacI	GAGCTC	2 cut(s)	1334, 1550
SapI	GCTCTTC	1 cut(s)	1194
SaqAI	TTAA	3 cut(s)	69, 1721, 1829
Sau3AI	GATC	4 cut(s)	1015, 1070, 1177, 1536
Sau96I	GGNCC	3 cut(s)	295, 348, 1598
SchI	GAGTC	3 cut(s)	641, 770, 1348
ScrFI	CCNGG	3 cut(s)	130, 560, 924
SduI	GDGCHC	4 cut(s)	1206, 1334, 1550, 1821
SfaNI	GCATC	5 cut(s)	519, 628, 1112, 1505, 1681
SfcI	CTRYAG	2 cut(s)	633, 705
SfuI	TTCGAA	1 cut(s)	1126
SinI	GGWCC	2 cut(s)	295, 348
SmiMI	CAYNNNNRTG	2 cut(s)	1774, 1845
SmlI	CTYRAG	1 cut(s)	1828
SmoI	CTYRAG	1 cut(s)	1828
SpeI	ACTAGT	1 cut(s)	1348
SphI	GCATGC	1 cut(s)	1523
Sse9I	AATT	7 cut(s)	304, 553, 642, 903, 1164, 1181, 1680
SsiI	CCGC	8 cut(s)	75, 104, 173, 402, 448, 614, 976, 1045
SspMI	CTAG	7 cut(s)	152, 806, 1019, 1053, 1322, 1349, 1673
SstI	GAGCTC	2 cut(s)	1334, 1550
StyD4I	CCNGG	3 cut(s)	128, 558, 922
StyI	CCWWGG	1 cut(s)	1509
TaaI	ACNGT	5 cut(s)	529, 592, 605, 1292, 1881
TaiI	ACGT	2 cut(s)	13, 52
TaqI	TCGA	7 cut(s)	13, 182, 243, 744, 1005, 1126, 1857
TasI	AATT	7 cut(s)	304, 553, 642, 903, 1164, 1181, 1680
TatI	WGTACW	2 cut(s)	369, 1143
TauI	GCSGC	5 cut(s)	78, 106, 404, 617, 1047
TfiI	GAWTC	4 cut(s)	196, 217, 718, 724
Tru1I	TTAA	3 cut(s)	69, 1721, 1829
Tru9I	TTAA	3 cut(s)	69, 1721, 1829
TscAI	CASTG	5 cut(s)	597, 1146, 1534, 1539, 1711
TseFI	GTSAC	2 cut(s)	773, 1351
TseI	GCWGC	9 cut(s)	84, 115, 632, 710, 1036, 1493, 1565, 1568, 1676
Tsp45I	GTSAC	2 cut(s)	773, 1351
TspDTI	ATGAA	8 cut(s)	157, 385, 397, 985, 1049, 1353, 1471, 1546
TspGWI	ACGGA	4 cut(s)	265, 441, 769, 1083
TspRI	CASTG	5 cut(s)	597, 1146, 1534, 1539, 1711
Tth111I	GACNNNGTC	1 cut(s)	779
Van91I	CCANNNNNTGG	1 cut(s)	761
Vha464I	CTTAAG	1 cut(s)	1828
VpaK11BI	GGWCC	2 cut(s)	295, 348
XapI	RAATTY	1 cut(s)	553
XbaI	TCTAGA	1 cut(s)	1018
XceI	RCATGY	2 cut(s)	1523, 1844
XmnI	GAANNNNTTC	1 cut(s)	338
XspI	CTAG	7 cut(s)	152, 806, 1019, 1053, 1322, 1349, 1673

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.