AT5G01950
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0002297
Physical Location & Seq
Reverse (-)
364902 .. 370295
5394 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G01950.1

Sequence Viewer

Length: 2856 bp
ATGGTGTTCCCTCAAAGACTCTATCTACATGCGCTCCTTGTTGCCTGTTGTTGCGTCCTTCTGCTTGCCGATGCTCAAAGAACCCACCCTTCAGAAGTCACTGCTTTACGATCTGTTAAAAGAAGTCTACTTGACCCTAAAGATTATTTGAGAAACTGGAATAGAGGCGACCCTTGCAGATCAAATTGGACTGGAGTTATCTGCTTTAATGAGATTGGTACTGACGACTACCTGCATGTCCGAGAACTCCTGCTGATGAATATGAATCTCTCCGGGACTTTGTCACCAGAGCTCCAAAAATTAGCTCATCTCGAAATATTAGATTTCATGTGGAATAATATAAGTGGTTCAATTCCAAACGAGATAGGACAGATATCATCCCTGGTACTCTTGCTGCTGAATGGAAACAAACTTTCAGGGACTTTACCAAGCGAACTCGGGTATCTTTCGAACTTGAACAGGTTCCAGATAGATGAGAATAACATCACAGGACCAATACCAAAGTCCTTTTCCAACTTGAAAAAAGTGAAACATCTTCACTTCAACAATAATTCGTTGACCGGCCAGATTCCAGTTGAGCTTTCCAATCTTACTAACATCTTTCATGTGCTGCTAGACAACAATAAATTATCTGGAAATCTTCCACCACAACTCTCTGCATTGCCAAACCTGCAAATCCTGCAACTTGATAATAACAACTTCAGTGGATCCGATATCCCAGCTTCCTATGGAAACTTTTCGAATATTCTAAAGCTGAGTCTTAGAAATTGTAGTTTGAAAGGGGCACTTCCTGATTTTAGCAAGATACGTCATCTCAAATACTTGGATCTTAGCTGGAATGAACTCACAGGACCTATACCTTCCTCTAATTTTTCTAAGGATGTGACAACCATTAATTTATCAAACAACATACTTAACGGATCCATCCCGCAGAGCTTCTCAGATCTCCCTTTACTTCAGATGCTATTGCTGAAAAACAATATGTTATCTGGATCTGTCCCTGATTCCCTTTGGAAGAATATCTCTTTTCCGAAGAAAGCTAGACTTCTACTTGATCTTAGGAATAATTCTCTGTCACGTGTTCAAGGAGATCTAACTCCTCCACAAAATGTCACTTTAAGGCTTGATGGCAATCTGATCTGCACTAATGGAAGCATATCAAACGCAAACCTATTCTGTGAGTCCAAAGGCAAAGAGTGGATATCACTACCAAACAATTCAACCAATTCTGCACTGGACTGTCCTCCTCTTGCCTGTCCCACTCCTGACTTCTACGAATACAGTCCAGCATCCCCATTACGATGCTTTTGTGCAGCGCCTCTTAGAATTGGATATCGTCTCAAAAGTCCTAGTTTCTCATACTTCCCTCCATATATTGATCAATTTGGCGAGTATGTTACCGATTTCCTTCAAATGGAACCATATCAACTCTGGATCGACTCATATCAATGGGAGAAAGGGCCTCGTCTGAGGATGTATCTGAAACTTTTTCCGAAAGTTAATGAAACCTATACAAGAACATTTAACGAGAGTGAAGTTCTCAGAATCCGAGGCATATTCGCTTCATGGAGATTTCCTGGTAGTGACTTATTTGGCCCGTATGAACTGCTCAACTTCACTCTGCAGGGGCCTTATTCATATGTTAACTTCAACAGTGAAAGGAAAGGCGTCAGCTGGCGACGATTGGCAGCAATAACTGCAGGGGCTGTGGTGACTGCTGTTGCGATATCCGCTGTGGTTGCAGCCTTGTTGCTTAGAAGATACAGCAAGCACGAGCGAGAGATATCTAGAAGACGGTCATCCTCGAAGGCTTCCTTGTTGAATTCTGGGATAAGAGGCTTTAGTTTCAAAGAGCTAGCAGAGGCCACCGACGATTTTAGCAGCTCAACTTTGGTTGGGCGCGGAGGCTATGGAAAGGTTTACAGAGGTGTCTTATCTGACAATACTGTTGCTGCAATAAAGCGAGCAGATGAAGGGTCTTTGCAAGGTGAAAAGGAGTTCTTGAATGAAATAGAGCTGCTCTCGAGGTTGCATCATCGGAATCTTGTGTCACTGATCGGTTACTGTGATGAAGAAAGCGAGCAGATGCTGGTGTACGAATTTATGTCAAATGGCACCCTGCGCGACTGGTTGTCTGCTAAGGGGAAGGAGTCATTGAGCTTTGGGATGAGGATTCGTGTTGCGTTGGGAGCAGCAAAAGGTATTCTCTACCTTCACACAGAAGCCAACCCGCCAGTTTTCCACCGAGACATCAAAGCCAGTAACATCCTCCTCGACCCCAACTTCAATGCCAAAGTTGCAGACTTTGGACTGTCTCGACTTGCTCCTGTTTTGGAGGACGAAGAGGATGTGCCTAAGCACGTCTCAACCGTTGTCCGTGGGACTCCAGGGTACCTGGATCCTGAATATTTCCTGACACACAAGCTGACGGACAAGAGCGATGTTTACAGCATCGGAGTTGTGTTCTTGGAGCTGCTGACTGGTATGCACGCCATATCCCATGGAAAAAATATAGTACGAGAGGTGAAGACGGCTGAGCAGAGGGATATGATGGTATCGCTGATAGACAAGAGAATGGAGCCGTGGTCGATGGAAAGTGTTGAAAAGTTTGCGGCTTTGGCACTGAGGTGTAGCCACGACTCACCAGAGATGAGGCCAGGAATGGCGGAGGTGGTGAAGGAGCTGGAGTCACTGCTCCAAGCATCCCCCGATAGGGAGACAAGAGTGGAATTGGCGTCATCTTCGTCAGTGCTGTCAACATCGTCGTCGAATGTGACAAGAGACCTTTACGAGTCGTCGAGCCTTCTAGGAAGCGATCTCAGCAGCGGCTTTGTTCCCAGCATCGCTCCTCGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

951

Amino Acids

106.23

Weight (kDa)

7.25

Isoelectric Point (pI)

40.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 29 - 68 8.8e-10 Leucine rich repeat N-terminal domain
LRR_8 PF13855 150 - 210 1.1e-06 Leucine rich repeat
Pkinase PF00069 628 - 893 5.9e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 630 - 895 1.2e-43 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 240, 678
Acc65I GGTACC 1 cut(s) 2391
AccB1I GGYRCC 2 cut(s) 2114, 2391
AccI GTMKAC 1 cut(s) 127
AccII CGCG 2 cut(s) 1902, 2124
AciI CCGC 7 cut(s) 929, 1731, 1902, 2231, 2612, 2666, 2826
AclWI GGATC 9 cut(s) 702, 715, 834, 915, 928, 1000, 1442, 2393, 2406
AcoI YGGCCR 1 cut(s) 562
AcsI RAATTY 2 cut(s) 1822, 2099
AcuI CTGAAG 3 cut(s) 75, 685, 941
AcvI CACGTG 1 cut(s) 1079
AcyI GRCGYC 2 cut(s) 1668, 2735
AfaI GTAC 5 cut(s) 220, 387, 2096, 2393, 2517
AfiI CCNNNNNNNGG 3 cut(s) 1414, 2712, 2713
AflIII ACRYGT 1 cut(s) 1078
AhdI GACNNNNNGTC 1 cut(s) 2131
AjiI CACGTC 1 cut(s) 2362
AjnI CCWGG 5 cut(s) 381, 1576, 2386, 2394, 2656
AjuI GAANNNNNNNTTGG 2 cut(s) 493, 525
AleI CACNNNNGTG 1 cut(s) 2626
Alw21I GWGCWC 1 cut(s) 294
Alw26I GTCTC 6 cut(s) 1343, 2241, 2319, 2368, 2711, 2775
AlwI GGATC 9 cut(s) 702, 715, 834, 915, 928, 1000, 1442, 2393, 2406
AlwNI CAGNNNCTG 2 cut(s) 1706, 2089
Ama87I CYCGRG 2 cut(s) 437, 2023
AoxI GGCC 6 cut(s) 562, 1460, 1594, 1628, 1863, 2654
ApoI RAATTY 2 cut(s) 1822, 2099
AseI ATTAAT 1 cut(s) 894
Asp700I GAANNNNTTC 2 cut(s) 461, 736
Asp718I GGTACC 1 cut(s) 2391
AspLEI GCGC 4 cut(s) 34, 1318, 1902, 2124
AspS9I GGNCC 5 cut(s) 491, 851, 1460, 1595, 1628
AsuC2I CCSGG 1 cut(s) 274
AsuHPI GGTGA 6 cut(s) 276, 1723, 2000, 2536, 2634, 2686
AsuII TTCGAA 2 cut(s) 449, 740
AsuNHI GCTAGC 1 cut(s) 1855
AvaI CYCGRG 2 cut(s) 437, 2023
AvaII GGWCC 2 cut(s) 491, 851
BaeGI GKGCMC 1 cut(s) 787
BaeI ACNNNNGTAYC 2 cut(s) 425, 458
BamHI GGATCC 3 cut(s) 707, 920, 2398
BanI GGYRCC 2 cut(s) 2114, 2391
BanII GRGCYC 1 cut(s) 294
BauI CACGAG 1 cut(s) 1772
BbrPI CACGTG 1 cut(s) 1079
BbsI GAAGAC 2 cut(s) 1798, 2534
Bbv12I GWGCWC 1 cut(s) 294
BccI CCATC 4 cut(s) 932, 1121, 2545, 2584
BceAI ACGGC 2 cut(s) 2547, 2566
BciT130I CCWGG 5 cut(s) 383, 1578, 2388, 2396, 2658
BclI TGATCA 1 cut(s) 1378
BcnI CCSGG 1 cut(s) 274
BcoDI GTCTC 6 cut(s) 1343, 2241, 2319, 2368, 2711, 2775
BfaI CTAG 6 cut(s) 614, 1041, 1350, 1788, 1856, 2807
BfmI CTRYAG 2 cut(s) 1622, 1698
BfoI RGCGCY 1 cut(s) 1319
BfuAI ACCTGC 2 cut(s) 240, 678
BglII AGATCT 2 cut(s) 943, 1090
BlpI GCTNAGC 1 cut(s) 2535
Bme1390I CCNGG 6 cut(s) 274, 383, 1578, 2388, 2396, 2658
Bme18I GGWCC 2 cut(s) 491, 851
BmeRI GACNNNNNGTC 1 cut(s) 2131
BmeT110I CYCGRG 2 cut(s) 437, 2023
BmgBI CACGTC 1 cut(s) 2362
BmgT120I GGNCC 5 cut(s) 491, 851, 1460, 1595, 1628
BmiI GGNNCC 9 cut(s) 464, 709, 922, 1419, 1629, 2116, 2393, 2400, 2580
BmrFI CCNGG 6 cut(s) 274, 383, 1578, 2388, 2396, 2658
BmsI GCATC 9 cut(s) 61, 951, 1292, 1298, 2041, 2076, 2460, 2711, 2850
BmtI GCTAGC 1 cut(s) 1859
BpiI GAAGAC 2 cut(s) 1798, 2534
BplI GAGNNNNNCTC 2 cut(s) 2006, 2038
BpmI CTGGAG 3 cut(s) 213, 2370, 2705
Bpu10I CCTNAGC 2 cut(s) 2139, 2355
Bpu1102I GCTNAGC 1 cut(s) 2535
Bpu14I TTCGAA 2 cut(s) 449, 740
BpuMI CCSGG 1 cut(s) 274
BsaAI YACGTR 1 cut(s) 1079
BsaBI GATNNNNATC 1 cut(s) 1131
BsaHI GRCGYC 2 cut(s) 1668, 2735
BsaI GGTCTC 1 cut(s) 2775
BsaJI CCNNGG 6 cut(s) 381, 1549, 2377, 2387, 2500, 2582
BsaXI ACNNNNNCTCC 8 cut(s) 18, 48, 276, 306, 2570, 2600, 2672, 2702
Bsc4I CCNNNNNNNGG 3 cut(s) 1414, 2712, 2713
Bse118I RCCGGY 1 cut(s) 560
Bse1I ACTGG 8 cut(s) 161, 196, 572, 1239, 2132, 2234, 2259, 2485
Bse3DI GCAATG 1 cut(s) 659
Bse8I GATNNNNATC 1 cut(s) 1131
BseBI CCWGG 5 cut(s) 383, 1578, 2388, 2396, 2658
BseDI CCNNGG 6 cut(s) 381, 1549, 2377, 2387, 2500, 2582
BseJI GATNNNNATC 1 cut(s) 1131
BseLI CCNNNNNNNGG 3 cut(s) 1414, 2712, 2713
BseMI GCAATG 1 cut(s) 659
BseMII CTCAG 7 cut(s) 746, 954, 1460, 1555, 2526, 2615, 2833
BseNI ACTGG 8 cut(s) 161, 196, 572, 1239, 2132, 2234, 2259, 2485
BseRI GAGGAG 4 cut(s) 1089, 1236, 2261, 2838
BseSI GKGCMC 1 cut(s) 787
BseYI CCCAGC 2 cut(s) 718, 2837
BsgI GTGCAG 3 cut(s) 1126, 1215, 1332
Bsh1236I CGCG 2 cut(s) 1902, 2124
BshFI GGCC 6 cut(s) 564, 1462, 1596, 1630, 1865, 2656
BshNI GGYRCC 2 cut(s) 2114, 2391
BsiHKAI GWGCWC 1 cut(s) 294
BsiHKCI CYCGRG 2 cut(s) 437, 2023
BsiSI CCGG 2 cut(s) 273, 561
BslFI GGGAC 5 cut(s) 289, 433, 983, 1242, 2395
BslI CCNNNNNNNGG 3 cut(s) 1414, 2712, 2713
BsmAI GTCTC 6 cut(s) 1343, 2241, 2319, 2368, 2711, 2775
BsmBI CGTCTC 2 cut(s) 1343, 2368
BsmFI GGGAC 5 cut(s) 289, 433, 983, 1242, 2395
BsnI GGCC 6 cut(s) 564, 1462, 1596, 1630, 1865, 2656
Bso31I GGTCTC 1 cut(s) 2775
BsoBI CYCGRG 2 cut(s) 437, 2023
Bsp119I TTCGAA 2 cut(s) 449, 740
Bsp1286I GDGCHC 2 cut(s) 294, 787
Bsp1720I GCTNAGC 1 cut(s) 2535
Bsp19I CCATGG 1 cut(s) 2500
BspACI CCGC 7 cut(s) 929, 1731, 1902, 2231, 2612, 2666, 2826
BspANI GGCC 6 cut(s) 564, 1462, 1596, 1630, 1865, 2656
BspCNI CTCAG 7 cut(s) 747, 953, 1461, 1554, 2527, 2616, 2832
BspFNI CGCG 2 cut(s) 1902, 2124
BspLI GGNNCC 9 cut(s) 464, 709, 922, 1419, 1629, 2116, 2393, 2400, 2580
BspMAI CTGCAG 2 cut(s) 1626, 1702
BspMI ACCTGC 2 cut(s) 240, 678
BspOI GCTAGC 1 cut(s) 1859
BspPI GGATC 9 cut(s) 702, 715, 834, 915, 928, 1000, 1442, 2393, 2406
BspT104I TTCGAA 2 cut(s) 449, 740
BspT107I GGYRCC 2 cut(s) 2114, 2391
BspTNI GGTCTC 1 cut(s) 2775
BsrDI GCAATG 1 cut(s) 659
BsrFI RCCGGY 1 cut(s) 560
BsrI ACTGG 8 cut(s) 161, 196, 572, 1239, 2132, 2234, 2259, 2485
BssAI RCCGGY 1 cut(s) 560
BssECI CCNNGG 6 cut(s) 381, 1549, 2377, 2387, 2500, 2582
BssNI GRCGYC 2 cut(s) 1668, 2735
BssSI CACGAG 1 cut(s) 1772
BssT1I CCWWGG 1 cut(s) 2500
Bst2BI CACGAG 1 cut(s) 1772
Bst2UI CCWGG 5 cut(s) 383, 1578, 2388, 2396, 2658
Bst4CI ACNGT 8 cut(s) 1241, 1283, 1655, 1797, 1948, 2066, 2313, 2371
Bst6I CTCTTC 1 cut(s) 2337
BstACI GRCGYC 2 cut(s) 1668, 2735
BstAPI GCANNNNNTGC 2 cut(s) 679, 1697
BstBAI YACGTR 1 cut(s) 1079
BstBI TTCGAA 2 cut(s) 449, 740
BstC8I GCNNGC 7 cut(s) 66, 1676, 1769, 1857, 1965, 2081, 2490
BstDSI CCRYGG 3 cut(s) 2377, 2500, 2582
BstFNI CGCG 2 cut(s) 1902, 2124
BstH2I RGCGCY 1 cut(s) 1319
BstHHI GCGC 4 cut(s) 34, 1318, 1902, 2124
BstMAI GTCTC 6 cut(s) 1343, 2241, 2319, 2368, 2711, 2775
BstNI CCWGG 5 cut(s) 383, 1578, 2388, 2396, 2658
BstNSI RCATGY 2 cut(s) 32, 239
BstSCI CCNGG 6 cut(s) 272, 381, 1576, 2386, 2394, 2656
BstSFI CTRYAG 2 cut(s) 1622, 1698
BstSLI GKGCMC 1 cut(s) 787
BstUI CGCG 2 cut(s) 1902, 2124
BstV2I GAAGAC 2 cut(s) 1798, 2534
BstX2I RGATCY 7 cut(s) 707, 826, 920, 943, 992, 1090, 2398
BstYI RGATCY 7 cut(s) 707, 826, 920, 943, 992, 1090, 2398
BsuRI GGCC 6 cut(s) 564, 1462, 1596, 1630, 1865, 2656
BtgI CCRYGG 3 cut(s) 2377, 2500, 2582
BtgZI GCGATG 2 cut(s) 2454, 2827
BtrI CACGTC 1 cut(s) 2362
BtsI GCAGTG 2 cut(s) 99, 2690
BtsIMutI CAGTG 8 cut(s) 99, 709, 1232, 1660, 2051, 2621, 2690, 2754
BveI ACCTGC 2 cut(s) 240, 678
Cac8I GCNNGC 7 cut(s) 66, 1676, 1769, 1857, 1965, 2081, 2490
CaiI CAGNNNCTG 2 cut(s) 1706, 2089
CfoI GCGC 4 cut(s) 34, 1318, 1902, 2124
Cfr10I RCCGGY 1 cut(s) 560
Cfr13I GGNCC 5 cut(s) 491, 851, 1460, 1595, 1628
CseI GACGC 3 cut(s) 43, 1657, 2724
Csp6I GTAC 5 cut(s) 219, 386, 2095, 2392, 2516
CspCI CAANNNNNGTGG 2 cut(s) 685, 720
CviAII CATG 6 cut(s) 29, 236, 328, 605, 1566, 2501
CviQI GTAC 5 cut(s) 219, 386, 2095, 2392, 2516
DriI GACNNNNNGTC 1 cut(s) 2131
EaeI YGGCCR 1 cut(s) 562
Eam1104I CTCTTC 1 cut(s) 2337
Eam1105I GACNNNNNGTC 1 cut(s) 2131
EarI CTCTTC 1 cut(s) 2337
EciI GGCGGA 1 cut(s) 2681
Ecl136II GAGCTC 1 cut(s) 292
Eco130I CCWWGG 1 cut(s) 2500
Eco24I GRGCYC 1 cut(s) 294
Eco31I GGTCTC 1 cut(s) 2775
Eco32I GATATC 6 cut(s) 375, 715, 1203, 1334, 1728, 1785
Eco47I GGWCC 2 cut(s) 491, 851
Eco53kI GAGCTC 1 cut(s) 292
Eco57I CTGAAG 3 cut(s) 75, 685, 941
Eco72I CACGTG 1 cut(s) 1079
Eco88I CYCGRG 2 cut(s) 437, 2023
EcoICRI GAGCTC 1 cut(s) 292
EcoO109I RGGNCCY 3 cut(s) 851, 1460, 1628
EcoRI GAATTC 1 cut(s) 1822
EcoRII CCWGG 5 cut(s) 381, 1576, 2386, 2394, 2656
EcoRV GATATC 6 cut(s) 375, 715, 1203, 1334, 1728, 1785
EcoT14I CCWWGG 1 cut(s) 2500
EcoT38I GRGCYC 1 cut(s) 294
ErhI CCWWGG 1 cut(s) 2500
Esp3I CGTCTC 2 cut(s) 1343, 2368
FaeI CATG 6 cut(s) 32, 239, 331, 608, 1569, 2504
FalI AAGNNNNNCTT 8 cut(s) 771, 803, 1029, 1061, 1799, 1831, 1985, 2017
FaqI GGGAC 5 cut(s) 289, 433, 983, 1242, 2395
FatI CATG 6 cut(s) 28, 235, 327, 604, 1565, 2500
FauI CCCGC 2 cut(s) 936, 2238
FauNDI CATATG 1 cut(s) 1639
FbaI TGATCA 1 cut(s) 1378
FblI GTMKAC 1 cut(s) 127
FriOI GRGCYC 1 cut(s) 294
FspBI CTAG 6 cut(s) 614, 1041, 1350, 1788, 1856, 2807
GlaI GCGC 4 cut(s) 33, 1317, 1901, 2123
GsaI CCCAGC 2 cut(s) 722, 2841
GsuI CTGGAG 3 cut(s) 213, 2370, 2705
HaeII RGCGCY 1 cut(s) 1319
HaeIII GGCC 6 cut(s) 564, 1462, 1596, 1630, 1865, 2656
HapII CCGG 2 cut(s) 273, 561
HgaI GACGC 3 cut(s) 43, 1657, 2724
HhaI GCGC 4 cut(s) 34, 1318, 1902, 2124
Hin1I GRCGYC 2 cut(s) 1668, 2735
Hin1II CATG 6 cut(s) 32, 239, 331, 608, 1569, 2504
Hin6I GCGC 4 cut(s) 32, 1316, 1900, 2122
HinP1I GCGC 4 cut(s) 32, 1316, 1900, 2122
HincII GTYRAC 3 cut(s) 558, 1645, 2757
HindII GTYRAC 3 cut(s) 558, 1645, 2757
HpaI GTTAAC 1 cut(s) 1645
HpaII CCGG 2 cut(s) 273, 561
HphI GGTGA 6 cut(s) 276, 1723, 2000, 2536, 2634, 2686
Hpy166II GTNNAC 7 cut(s) 128, 558, 1645, 1921, 2095, 2446, 2757
Hpy8I GTNNAC 7 cut(s) 128, 558, 1645, 1921, 2095, 2446, 2757
Hpy99I CGWCG 5 cut(s) 1683, 1874, 2767, 2770, 2800
HpyCH4III ACNGT 8 cut(s) 1241, 1283, 1655, 1797, 1948, 2066, 2313, 2371
HpyCH4IV ACGT 3 cut(s) 808, 1078, 2361
HpySE526I ACGT 3 cut(s) 808, 1078, 2361
Hsp92I GRCGYC 2 cut(s) 1668, 2735
Hsp92II CATG 6 cut(s) 32, 239, 331, 608, 1569, 2504
HspAI GCGC 4 cut(s) 32, 1316, 1900, 2122
KpnI GGTACC 1 cut(s) 2395
Ksp22I TGATCA 1 cut(s) 1378
KspAI GTTAAC 1 cut(s) 1645
LmnI GCTCC 9 cut(s) 39, 297, 2189, 2329, 2470, 2578, 2680, 2700, 2851
LweI GCATC 9 cut(s) 61, 951, 1292, 1298, 2041, 2076, 2460, 2711, 2850
MaeI CTAG 6 cut(s) 614, 1041, 1350, 1788, 1856, 2807
MaeII ACGT 3 cut(s) 808, 1078, 2361
MflI RGATCY 7 cut(s) 707, 826, 920, 943, 992, 1090, 2398
MhlI GDGCHC 2 cut(s) 294, 787
MlyI GAGTC 9 cut(s) 12, 766, 1190, 1433, 2159, 2377, 2633, 2696, 2801
MmeI TCCRAC 1 cut(s) 537
MroXI GAANNNNTTC 2 cut(s) 461, 736
MseI TTAA 8 cut(s) 117, 207, 894, 915, 1118, 1500, 1524, 1644
MslI CAYNNNNRTG 3 cut(s) 1300, 1447, 2626
MspA1I CMGCKG 3 cut(s) 1674, 1733, 2826
MspI CCGG 2 cut(s) 273, 561
MspR9I CCNGG 6 cut(s) 274, 383, 1578, 2388, 2396, 2658
MvaI CCWGG 5 cut(s) 383, 1578, 2388, 2396, 2658
MvnI CGCG 2 cut(s) 1902, 2124
NciI CCSGG 1 cut(s) 274
NcoI CCATGG 1 cut(s) 2500
NdeI CATATG 1 cut(s) 1639
NheI GCTAGC 1 cut(s) 1855
NlaIII CATG 6 cut(s) 32, 239, 331, 608, 1569, 2504
NlaIV GGNNCC 9 cut(s) 464, 709, 922, 1419, 1629, 2116, 2393, 2400, 2580
NspI RCATGY 2 cut(s) 32, 239
NspV TTCGAA 2 cut(s) 449, 740
OliI CACNNNNGTG 1 cut(s) 2626
PaeR7I CTCGAG 1 cut(s) 2023
PcsI WCGNNNNNNNCGW 1 cut(s) 2367
PdmI GAANNNNTTC 2 cut(s) 461, 736
PfeI GAWTC 6 cut(s) 265, 568, 1004, 1545, 2041, 2173
PflFI GACNNNGTC 1 cut(s) 280
PfoI TCCNGGA 1 cut(s) 272
PleI GAGTC 9 cut(s) 12, 765, 1189, 1433, 2158, 2377, 2633, 2695, 2800
PmaCI CACGTG 1 cut(s) 1079
PmlI CACGTG 1 cut(s) 1079
PpsI GAGTC 9 cut(s) 12, 765, 1189, 1433, 2158, 2377, 2633, 2695, 2800
Ppu21I YACGTR 1 cut(s) 1079
PpuMI RGGWCCY 1 cut(s) 851
PshBI ATTAAT 1 cut(s) 894
Psp124BI GAGCTC 1 cut(s) 294
Psp5II RGGWCCY 1 cut(s) 851
Psp6I CCWGG 5 cut(s) 381, 1576, 2386, 2394, 2656
PspCI CACGTG 1 cut(s) 1079
PspFI CCCAGC 2 cut(s) 718, 2837
PspGI CCWGG 5 cut(s) 381, 1576, 2386, 2394, 2656
PspN4I GGNNCC 9 cut(s) 464, 709, 922, 1419, 1629, 2116, 2393, 2400, 2580
PspPI GGNCC 5 cut(s) 491, 851, 1460, 1595, 1628
PspPPI RGGWCCY 1 cut(s) 851
PstI CTGCAG 2 cut(s) 1626, 1702
PstNI CAGNNNCTG 2 cut(s) 1706, 2089
PsuI RGATCY 7 cut(s) 707, 826, 920, 943, 992, 1090, 2398
PsyI GACNNNGTC 1 cut(s) 280
PvuII CAGCTG 1 cut(s) 1674
RsaI GTAC 5 cut(s) 220, 387, 2096, 2393, 2517
RsaNI GTAC 5 cut(s) 219, 386, 2095, 2392, 2516
RseI CAYNNNNRTG 3 cut(s) 1300, 1447, 2626
SacI GAGCTC 1 cut(s) 294
SaqAI TTAA 8 cut(s) 117, 207, 894, 915, 1118, 1500, 1524, 1644
Sau96I GGNCC 5 cut(s) 491, 851, 1460, 1595, 1628
SchI GAGTC 9 cut(s) 12, 766, 1190, 1433, 2159, 2377, 2633, 2696, 2801
ScrFI CCNGG 6 cut(s) 274, 383, 1578, 2388, 2396, 2658
SduI GDGCHC 2 cut(s) 294, 787
SfaNI GCATC 9 cut(s) 61, 951, 1292, 1298, 2041, 2076, 2460, 2711, 2850
SfcI CTRYAG 2 cut(s) 1622, 1698
Sfr274I CTCGAG 1 cut(s) 2023
SfuI TTCGAA 2 cut(s) 449, 740
SinI GGWCC 2 cut(s) 491, 851
SlaI CTCGAG 1 cut(s) 2023
SmiMI CAYNNNNRTG 3 cut(s) 1300, 1447, 2626
SmlI CTYRAG 1 cut(s) 2023
SmoI CTYRAG 1 cut(s) 2023
SsiI CCGC 7 cut(s) 929, 1731, 1902, 2231, 2612, 2666, 2826
SspI AATATT 3 cut(s) 318, 745, 2408
SspMI CTAG 6 cut(s) 614, 1041, 1350, 1788, 1856, 2807
SstI GAGCTC 1 cut(s) 294
StyD4I CCNGG 6 cut(s) 272, 381, 1576, 2386, 2394, 2656
StyI CCWWGG 1 cut(s) 2500
TaaI ACNGT 8 cut(s) 1241, 1283, 1655, 1797, 1948, 2066, 2313, 2371
TaiI ACGT 3 cut(s) 811, 1081, 2364
TauI GCSGC 2 cut(s) 2615, 2829
TfiI GAWTC 6 cut(s) 265, 568, 1004, 1545, 2041, 2173
Tru1I TTAA 8 cut(s) 117, 207, 894, 915, 1118, 1500, 1524, 1644
Tru9I TTAA 8 cut(s) 117, 207, 894, 915, 1118, 1500, 1524, 1644
TscAI CASTG 8 cut(s) 106, 709, 1239, 1660, 2058, 2628, 2697, 2754
TspGWI ACGGA 3 cut(s) 933, 2366, 2444
TspRI CASTG 8 cut(s) 106, 709, 1239, 1660, 2058, 2628, 2697, 2754
Tth111I GACNNNGTC 1 cut(s) 280
VpaK11BI GGWCC 2 cut(s) 491, 851
VspI ATTAAT 1 cut(s) 894
XapI RAATTY 2 cut(s) 1822, 2099
XbaI TCTAGA 1 cut(s) 1787
XceI RCATGY 2 cut(s) 32, 239
XcmI CCANNNNNNNNNTGG 2 cut(s) 1231, 1428
XhoI CTCGAG 1 cut(s) 2023
XmiI GTMKAC 1 cut(s) 127
XmnI GAANNNNTTC 2 cut(s) 461, 736
XspI CTAG 6 cut(s) 614, 1041, 1350, 1788, 1856, 2807
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.