Rh3CG102200
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
OG0002297
Physical Location & Seq
Reverse (-)
8107192 .. 8114950
7759 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG102200.1

Sequence Viewer

Length: 2157 bp
ATGTTGAGACTGAGATTTTTGGGCTGCCTCATTGGTCTGGCTTGTTCTTGCTTCTTCCTAGTTGCGGTTGCACAAGTTACTAATCCTTCTGAAGTGGATGCATTGAGAGCAGTGAAGGGTAGTCTGATTGATTCCGGGAAGCATTTGGGGAATTGGGACAAAGGGGATCCATGTAAAGCGAATTGGACCGGAGTTTTGTGCTCCGGTGATGTTGGGACTGATGGATACTTGCATGTCCAGGAGCTGCAACTGCTAAGTAAGAATCTCTCAGGATCTTTAGCGCCTGAGCTTGGCAAACTATCTCAACTTCTGATATTAGATTTCATGTGGAATAACTTAAGTGGGACTATACCGAAGGAGATAGGAGACATTACGTCCTTGAAACTCTTGCTCTTGAATGGAAACAAACTATCGGGTTCCTTGCCTGATGAGCTCGGTTATCTTGAAAATCTACATAGACTACAAGTTGACGAGAACCATCTTTCAGGTTCAATACCAAAATCATTTCTTAACTTGCGCGGCTTAAAACACCTCCATATGAACAACAACTCCTTCAGCGGCCAAATTCCATCTGAGATTTCTGAATTACCCGCTCTTCTTCATGTGCTCTTGGATAATAATAACTTATCTGGATATCTTCCACCAGACTTCTCCAACATACCAGAGTTGCGCATACTTCAACTCGATAACAACAACTTCACGGGAACTGAGATTCCAGCTACTTATGGAACCCTTTCCGGATTGGCAAAGTTAAGTCTCAGGAACTGCAGTTTGCAGGGAGCAATTCCTGATCTTAGCCGGATACCTAACCTCAGTTATCTAGATCTAAGCTGGAATCATCTTGCTGGACCGATACCATCACATGGGCTTTCTGACAATATGACAACAATTGTTCTGTCAGATAATCATCTTAGCGGATCTATTCCTGAAAGTTTCTCTCATTTTCCTCGTCTTCAGAAATTGTCGCTCAAAAATAATCAGTTGAACGGTTCTGTCCCTGCTATATGGAGGAACATATCTTTTAGTACAAGAGCTAGACTTTCATTTGATCTCCGGAACAATTCACTCTCTAACATATTGGGAGAGCTGAATCCTCCAGCAAATGTCACCTTGAGGCTTGAAGGAAATCCTATTTGCAAGAATGCTAGCATAGAAAATATAAGCCCGTTCTGTCAATCTGAAGCGAGTGATGGGGTCCCCAAAGATTCAATAAATCCAACTCAACAGATGACCTGCCCTATTCAAGCATGTCCAGTGGATGATTTCTATGAATATGTTCCATCTTCCCCTGTGCCATGCTTTTGTGCATCACCTATTATAGTTGAATATCGTCTGAAAAGCCCGAGCTTTTCTTACTTTGGTCCATATATACAGCAGTTTGAAGAGTATATAACTAGGTCTCTAAAATTGGAGATTTACCAGTTATATATTAGTTCCTTTGTCTGGGAAGAAGGGCCTCGTTTACAGATGCAGTTGAAGTTCTTCCCTGTGTATGGTGCTTCACACTCGCATGCATTAAATGCAAGTGAGGTTCTGCGAATTAGAGGCATCTTTACATCATGGGAATTTTCTCAGAATCAATTCTTTGGACCATATGAGCTACTCGACTTCAAACTGCTGGGACCTTATTCAGATAATGCACCAGAAACCGATACAGAGCACCTTCAAGGAGACACTCTTGGCTACCTGGATCCAGAGTATTTCTTGACCAGTACGTTAACAGACAAAAGCGATGTCTATAGCCTTGGAATTGTGTTTCTGGAGCTCTTGACTGGTGTGCTGCCAATATCACATGGCAAAAACATTGTTCGCGAGGTGAATATGGCTCATCAGTCAGGCTTGATGTTCTCCATTATAGATAGCAGAATGGGTTCGTATCCATCTGAATGTGTTCAGAGGTTTGTAGCTTTGGCCCTCAGATGTTGCCATGATAAACAAGACGACCGGCCATCAATGTTGGATGTGGTGAGGGAGCTCGAGAACATAATCAAACTTATGCCGGGAGCTGAAACAATGTTTTCACCATCTGGTTCCTCATACACTGAAAAATCATTAACTTCATCATCGACTTTTACTGGGGACCCATATACGTCCTCCTCCAACGTGGAAGGAAGTGATCTAATCAGTGGTGTAATCCCTACTATTTCGCCACGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

718

Amino Acids

79.25

Weight (kDa)

5.23

Isoelectric Point (pI)

38.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 29 - 68 3.4e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 92 - 181 5.5e-07 Leucine-rich repeat region
LRR_8 PF13855 150 - 209 5.1e-06 Leucine rich repeat
LRR_14 PF23598 170 - 324 5.1e-07 Leucine-rich repeat region
LRR_8 PF13855 221 - 281 1.7e-06 Leucine rich repeat
Pkinase PF00069 556 - 657 1.1e-09 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 559 - 659 5.2e-08 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 671
Acc36I ACCTGC 1 cut(s) 1241
AccB7I CCANNNNNTGG 1 cut(s) 863
AccBSI CCGCTC 1 cut(s) 593
AccII CGCG 2 cut(s) 519, 1812
AccIII TCCGGA 2 cut(s) 737, 1053
AciI CCGC 5 cut(s) 65, 519, 558, 591, 915
AclWI GGATC 6 cut(s) 161, 174, 280, 925, 1685, 1698
AcoI YGGCCR 2 cut(s) 559, 1946
AcsI RAATTY 2 cut(s) 564, 1565
AcuI CTGAAG 4 cut(s) 111, 538, 938, 1200
AfaI GTAC 2 cut(s) 1027, 1714
AfiI CCNNNNNNNGG 5 cut(s) 64, 290, 863, 1443, 1493
AflII CTTAAG 1 cut(s) 337
AhdI GACNNNNNGTC 1 cut(s) 373
AjnI CCWGG 2 cut(s) 237, 1686
AloI GAACNNNNNNTCC 4 cut(s) 533, 565, 697, 729
Alw21I GWGCWC 6 cut(s) 203, 435, 609, 1662, 1767, 1977
Alw26I GTCTC 4 cut(s) 360, 761, 1404, 1665
AlwI GGATC 6 cut(s) 161, 174, 280, 925, 1685, 1698
AlwNI CAGNNNCTG 2 cut(s) 244, 765
Ama87I CYCGRG 2 cut(s) 1342, 1976
Aor13HI TCCGGA 2 cut(s) 737, 1053
AoxI GGCC 4 cut(s) 559, 1454, 1911, 1946
ApeKI GCWGC 3 cut(s) 24, 244, 1780
ApoI RAATTY 2 cut(s) 564, 1565
ArsI GACNNNNNNTTYG 4 cut(s) 178, 210, 1719, 1751
Asp700I GAANNNNTTC 6 cut(s) 733, 1275, 1481, 1580, 1870, 1890
AspLEI GCGC 3 cut(s) 283, 519, 672
AspS9I GGNCC 9 cut(s) 186, 848, 1195, 1361, 1454, 1589, 1622, 1912, 2080
AsuC2I CCSGG 2 cut(s) 136, 2001
AsuHPI GGTGA 6 cut(s) 218, 1099, 1302, 1828, 1978, 2013
AsuNHI GCTAGC 1 cut(s) 1145
AvaI CYCGRG 2 cut(s) 1342, 1976
AvaII GGWCC 7 cut(s) 186, 848, 1195, 1361, 1589, 1622, 2080
BamHI GGATCC 2 cut(s) 166, 1690
BanII GRGCYC 3 cut(s) 435, 1767, 1977
BbsI GAAGAC 1 cut(s) 944
Bbv12I GWGCWC 6 cut(s) 203, 435, 609, 1662, 1767, 1977
BbvI GCAGC 3 cut(s) 11, 231, 1767
BccI CCATC 9 cut(s) 215, 486, 577, 865, 1184, 1288, 1888, 1957, 2032
BciT130I CCWGG 2 cut(s) 239, 1688
BciVI GTATCC 3 cut(s) 218, 795, 1887
BcnI CCSGG 2 cut(s) 136, 2001
BcoDI GTCTC 4 cut(s) 360, 761, 1404, 1665
BfaI CTAG 5 cut(s) 59, 821, 1035, 1146, 1395
BfmI CTRYAG 2 cut(s) 766, 1738
BfoI RGCGCY 1 cut(s) 284
BfrI CTTAAG 1 cut(s) 337
BfuAI ACCTGC 1 cut(s) 1241
BfuI GTATCC 3 cut(s) 218, 795, 1887
BglII AGATCT 1 cut(s) 823
BisI GCNGC 5 cut(s) 25, 245, 520, 559, 1781
BlsI GCNGC 5 cut(s) 26, 246, 521, 560, 1782
Bme1390I CCNGG 4 cut(s) 136, 239, 1688, 2001
Bme18I GGWCC 7 cut(s) 186, 848, 1195, 1361, 1589, 1622, 2080
BmeRI GACNNNNNGTC 1 cut(s) 373
BmeT110I CYCGRG 2 cut(s) 1342, 1976
BmgT120I GGNCC 9 cut(s) 186, 848, 1195, 1361, 1454, 1589, 1622, 1912, 2080
BmrFI CCNGG 4 cut(s) 136, 239, 1688, 2001
BmrI ACTGGG 1 cut(s) 2085
BmsI GCATC 4 cut(s) 88, 1316, 1458, 1557
BmtI GCTAGC 1 cut(s) 1149
BmuI ACTGGG 1 cut(s) 2085
BpiI GAAGAC 1 cut(s) 944
BpmI CTGGAG 2 cut(s) 1080, 1781
Bpu10I CCTNAGC 1 cut(s) 285
BpuEI CTTGAG 1 cut(s) 1132
BpuMI CCSGG 2 cut(s) 136, 2001
BsaBI GATNNNNATC 1 cut(s) 906
BsaI GGTCTC 1 cut(s) 1404
BsaJI CCNNGG 2 cut(s) 1744, 2150
BsaWI WCCGGW 4 cut(s) 188, 203, 737, 1053
BsaXI ACNNNNNCTCC 2 cut(s) 533, 563
Bsc4I CCNNNNNNNGG 5 cut(s) 64, 290, 863, 1443, 1493
Bse118I RCCGGY 1 cut(s) 1944
Bse1I ACTGG 5 cut(s) 1253, 1420, 1710, 1777, 2080
Bse8I GATNNNNATC 1 cut(s) 906
BseAI TCCGGA 2 cut(s) 737, 1053
BseBI CCWGG 2 cut(s) 239, 1688
BseDI CCNNGG 2 cut(s) 1744, 2150
BseGI GGATG 3 cut(s) 103, 1264, 1966
BseJI GATNNNNATC 1 cut(s) 906
BseLI CCNNNNNNNGG 5 cut(s) 64, 290, 863, 1443, 1493
BseMII CTCAG 8 cut(s) 276, 282, 564, 699, 772, 826, 1586, 1930
BseNI ACTGG 5 cut(s) 1253, 1420, 1710, 1777, 2080
BseRI GAGGAG 1 cut(s) 2086
BseXI GCAGC 3 cut(s) 11, 231, 1767
BseYI CCCAGC 1 cut(s) 1618
Bsh1236I CGCG 2 cut(s) 519, 1812
Bsh1285I CGRYCG 1 cut(s) 1945
BshFI GGCC 4 cut(s) 561, 1456, 1913, 1948
BsiEI CGRYCG 1 cut(s) 1945
BsiHKAI GWGCWC 6 cut(s) 203, 435, 609, 1662, 1767, 1977
BsiHKCI CYCGRG 2 cut(s) 1342, 1976
BsiSI CCGG 8 cut(s) 135, 189, 204, 738, 799, 1054, 1945, 2000
BslFI GGGAC 7 cut(s) 170, 229, 358, 980, 1181, 1635, 2093
BslI CCNNNNNNNGG 5 cut(s) 64, 290, 863, 1443, 1493
BsmAI GTCTC 4 cut(s) 360, 761, 1404, 1665
BsmFI GGGAC 7 cut(s) 170, 229, 358, 980, 1181, 1635, 2093
BsmI GAATGC 1 cut(s) 1147
BsnI GGCC 4 cut(s) 561, 1456, 1913, 1948
Bso31I GGTCTC 1 cut(s) 1404
BsoBI CYCGRG 2 cut(s) 1342, 1976
Bsp1286I GDGCHC 6 cut(s) 203, 435, 609, 1662, 1767, 1977
Bsp13I TCCGGA 2 cut(s) 737, 1053
Bsp143I GATC 8 cut(s) 166, 272, 790, 823, 917, 1048, 1690, 2116
Bsp68I TCGCGA 1 cut(s) 1812
BspACI CCGC 5 cut(s) 65, 519, 558, 591, 915
BspANI GGCC 4 cut(s) 561, 1456, 1913, 1948
BspCNI CTCAG 8 cut(s) 277, 281, 565, 700, 771, 825, 1585, 1929
BspEI TCCGGA 2 cut(s) 737, 1053
BspFNI CGCG 2 cut(s) 519, 1812
BspMAI CTGCAG 1 cut(s) 770
BspMI ACCTGC 1 cut(s) 1241
BspOI GCTAGC 1 cut(s) 1149
BspPI GGATC 6 cut(s) 161, 174, 280, 925, 1685, 1698
BspQI GCTCTTC 1 cut(s) 600
BspTI CTTAAG 1 cut(s) 337
BspTNI GGTCTC 1 cut(s) 1404
BsrBI CCGCTC 1 cut(s) 593
BsrFI RCCGGY 1 cut(s) 1944
BsrI ACTGG 5 cut(s) 1253, 1420, 1710, 1777, 2080
BssAI RCCGGY 1 cut(s) 1944
BssECI CCNNGG 2 cut(s) 1744, 2150
BssMI GATC 8 cut(s) 166, 272, 790, 823, 917, 1048, 1690, 2116
BssT1I CCWWGG 1 cut(s) 1744
Bst2UI CCWGG 2 cut(s) 239, 1688
Bst4CI ACNGT 2 cut(s) 989, 2154
Bst6I CTCTTC 2 cut(s) 600, 1377
BstAFI CTTAAG 1 cut(s) 337
BstAPI GCANNNNNTGC 1 cut(s) 1520
BstC8I GCNNGC 2 cut(s) 1147, 1512
BstDSI CCRYGG 1 cut(s) 2150
BstF5I GGATG 3 cut(s) 103, 1264, 1966
BstFNI CGCG 2 cut(s) 519, 1812
BstH2I RGCGCY 1 cut(s) 284
BstHHI GCGC 3 cut(s) 283, 519, 672
BstKTI GATC 8 cut(s) 169, 275, 793, 826, 920, 1051, 1693, 2119
BstMAI GTCTC 4 cut(s) 360, 761, 1404, 1665
BstMBI GATC 8 cut(s) 166, 272, 790, 823, 917, 1048, 1690, 2116
BstMCI CGRYCG 1 cut(s) 1945
BstMWI GCNNNNNNNGC 4 cut(s) 107, 250, 430, 1520
BstNI CCWGG 2 cut(s) 239, 1688
BstNSI RCATGY 3 cut(s) 236, 1251, 1514
BstSCI CCNGG 4 cut(s) 134, 237, 1686, 1999
BstSFI CTRYAG 2 cut(s) 766, 1738
BstUI CGCG 2 cut(s) 519, 1812
BstV1I GCAGC 3 cut(s) 11, 231, 1767
BstV2I GAAGAC 1 cut(s) 944
BstX2I RGATCY 5 cut(s) 166, 272, 823, 917, 1690
BstYI RGATCY 5 cut(s) 166, 272, 823, 917, 1690
BsuI GTATCC 3 cut(s) 218, 795, 1887
BsuRI GGCC 4 cut(s) 561, 1456, 1913, 1948
BtgI CCRYGG 1 cut(s) 2150
BtgZI GCGATG 1 cut(s) 1746
BtsCI GGATG 3 cut(s) 103, 1264, 1966
BtsI GCAGTG 1 cut(s) 117
BtsIMutI CAGTG 4 cut(s) 117, 1260, 2040, 2131
BtuMI TCGCGA 1 cut(s) 1812
BveI ACCTGC 1 cut(s) 1241
Cac8I GCNNGC 2 cut(s) 1147, 1512
CaiI CAGNNNCTG 2 cut(s) 244, 765
CfoI GCGC 3 cut(s) 283, 519, 672
Cfr10I RCCGGY 1 cut(s) 1944
Cfr13I GGNCC 9 cut(s) 186, 848, 1195, 1361, 1454, 1589, 1622, 1912, 2080
Csp6I GTAC 2 cut(s) 1026, 1713
CviQI GTAC 2 cut(s) 1026, 1713
DpnI GATC 8 cut(s) 168, 274, 792, 825, 919, 1050, 1692, 2118
DpnII GATC 8 cut(s) 166, 272, 790, 823, 917, 1048, 1690, 2116
DriI GACNNNNNGTC 1 cut(s) 373
EaeI YGGCCR 2 cut(s) 559, 1946
Eam1104I CTCTTC 2 cut(s) 600, 1377
Eam1105I GACNNNNNGTC 1 cut(s) 373
EarI CTCTTC 2 cut(s) 600, 1377
Ecl136II GAGCTC 3 cut(s) 433, 1765, 1975
Eco130I CCWWGG 1 cut(s) 1744
Eco24I GRGCYC 3 cut(s) 435, 1767, 1977
Eco31I GGTCTC 1 cut(s) 1404
Eco32I GATATC 1 cut(s) 635
Eco47I GGWCC 7 cut(s) 186, 848, 1195, 1361, 1589, 1622, 2080
Eco53kI GAGCTC 3 cut(s) 433, 1765, 1975
Eco57I CTGAAG 4 cut(s) 111, 538, 938, 1200
Eco88I CYCGRG 2 cut(s) 1342, 1976
EcoICRI GAGCTC 3 cut(s) 433, 1765, 1975
EcoO109I RGGNCCY 4 cut(s) 1195, 1454, 1622, 2080
EcoRII CCWGG 2 cut(s) 237, 1686
EcoRV GATATC 1 cut(s) 635
EcoT14I CCWWGG 1 cut(s) 1744
EcoT22I ATGCAT 2 cut(s) 103, 1516
EcoT38I GRGCYC 3 cut(s) 435, 1767, 1977
ErhI CCWWGG 1 cut(s) 1744
FaqI GGGAC 7 cut(s) 170, 229, 358, 980, 1181, 1635, 2093
FauI CCCGC 1 cut(s) 598
FauNDI CATATG 2 cut(s) 537, 1594
Fnu4HI GCNGC 5 cut(s) 25, 245, 520, 559, 1781
FokI GGATG 3 cut(s) 110, 1271, 1973
FriOI GRGCYC 3 cut(s) 435, 1767, 1977
Fsp4HI GCNGC 5 cut(s) 25, 245, 520, 559, 1781
FspBI CTAG 5 cut(s) 59, 821, 1035, 1146, 1395
FspI TGCGCA 1 cut(s) 671
GlaI GCGC 3 cut(s) 282, 518, 671
GluI GCNGC 5 cut(s) 25, 245, 520, 559, 1781
GsaI CCCAGC 1 cut(s) 1622
GsuI CTGGAG 2 cut(s) 1080, 1781
HaeII RGCGCY 1 cut(s) 284
HaeIII GGCC 4 cut(s) 561, 1456, 1913, 1948
HapII CCGG 8 cut(s) 135, 189, 204, 738, 799, 1054, 1945, 2000
HhaI GCGC 3 cut(s) 283, 519, 672
Hin6I GCGC 3 cut(s) 281, 517, 670
HinP1I GCGC 3 cut(s) 281, 517, 670
HincII GTYRAC 2 cut(s) 469, 1719
HindII GTYRAC 2 cut(s) 469, 1719
HinfI GANTC 7 cut(s) 131, 262, 712, 835, 1090, 1205, 1576
HpaI GTTAAC 1 cut(s) 1719
HpaII CCGG 8 cut(s) 135, 189, 204, 738, 799, 1054, 1945, 2000
HphI GGTGA 6 cut(s) 218, 1099, 1302, 1828, 1978, 2013
Hpy166II GTNNAC 3 cut(s) 469, 1463, 1719
Hpy8I GTNNAC 3 cut(s) 469, 1463, 1719
HpyAV CCTTC 8 cut(s) 96, 109, 349, 562, 1115, 1445, 1673, 2102
HpyCH4III ACNGT 2 cut(s) 989, 2154
HpyCH4IV ACGT 4 cut(s) 374, 1715, 2090, 2103
HpyF10VI GCNNNNNNNGC 4 cut(s) 107, 250, 430, 1520
HpySE526I ACGT 4 cut(s) 374, 1715, 2090, 2103
HspAI GCGC 3 cut(s) 281, 517, 670
KflI GGGWCCC 2 cut(s) 1195, 2080
Kpn2I TCCGGA 2 cut(s) 737, 1053
KspAI GTTAAC 1 cut(s) 1719
Kzo9I GATC 8 cut(s) 166, 272, 790, 823, 917, 1048, 1690, 2116
LguI GCTCTTC 1 cut(s) 600
LmnI GCTCC 6 cut(s) 206, 241, 779, 1762, 1972, 2003
Lsp1109I GCAGC 3 cut(s) 11, 231, 1767
LweI GCATC 4 cut(s) 88, 1316, 1458, 1557
MaeI CTAG 5 cut(s) 59, 821, 1035, 1146, 1395
MaeII ACGT 4 cut(s) 374, 1715, 2090, 2103
MaeIII GTNAC 2 cut(s) 76, 1105
MalI GATC 8 cut(s) 168, 274, 792, 825, 919, 1050, 1692, 2118
MbiI CCGCTC 1 cut(s) 593
MboI GATC 8 cut(s) 166, 272, 790, 823, 917, 1048, 1690, 2116
MboII GAAGA 9 cut(s) 46, 587, 590, 629, 944, 1275, 1394, 1460, 1474
MfeI CAATTG 1 cut(s) 888
MflI RGATCY 5 cut(s) 166, 272, 823, 917, 1690
MhlI GDGCHC 6 cut(s) 203, 435, 609, 1662, 1767, 1977
MmeI TCCRAC 4 cut(s) 678, 1241, 1938, 2124
Mph1103I ATGCAT 2 cut(s) 103, 1516
MroI TCCGGA 2 cut(s) 737, 1053
MroXI GAANNNNTTC 6 cut(s) 733, 1275, 1481, 1580, 1870, 1890
MseI TTAA 7 cut(s) 338, 510, 524, 752, 1517, 1718, 2054
MslI CAYNNNNRTG 2 cut(s) 1509, 1885
MspA1I CMGCKG 1 cut(s) 558
MspCI CTTAAG 1 cut(s) 337
MspI CCGG 8 cut(s) 135, 189, 204, 738, 799, 1054, 1945, 2000
MspR9I CCNGG 4 cut(s) 136, 239, 1688, 2001
MunI CAATTG 1 cut(s) 888
Mva1269I GAATGC 1 cut(s) 1147
MvaI CCWGG 2 cut(s) 239, 1688
MvnI CGCG 2 cut(s) 519, 1812
MwoI GCNNNNNNNGC 4 cut(s) 107, 250, 430, 1520
NciI CCSGG 2 cut(s) 136, 2001
NdeI CATATG 2 cut(s) 537, 1594
NdeII GATC 8 cut(s) 166, 272, 790, 823, 917, 1048, 1690, 2116
NheI GCTAGC 1 cut(s) 1145
NmuCI GTSAC 1 cut(s) 1105
NruI TCGCGA 1 cut(s) 1812
NsbI TGCGCA 1 cut(s) 671
NsiI ATGCAT 2 cut(s) 103, 1516
NspI RCATGY 3 cut(s) 236, 1251, 1514
PaeI GCATGC 1 cut(s) 1514
PaeR7I CTCGAG 1 cut(s) 1976
PciSI GCTCTTC 1 cut(s) 600
PctI GAATGC 1 cut(s) 1147
PdmI GAANNNNTTC 6 cut(s) 733, 1275, 1481, 1580, 1870, 1890
PfeI GAWTC 7 cut(s) 131, 262, 712, 835, 1090, 1205, 1576
PflMI CCANNNNNTGG 1 cut(s) 863
PfoI TCCNGGA 2 cut(s) 134, 237
PkrI GCNGC 5 cut(s) 26, 246, 521, 560, 1782
PpuMI RGGWCCY 3 cut(s) 1195, 1622, 2080
Psp124BI GAGCTC 3 cut(s) 435, 1767, 1977
Psp5II RGGWCCY 3 cut(s) 1195, 1622, 2080
Psp6I CCWGG 2 cut(s) 237, 1686
PspFI CCCAGC 1 cut(s) 1618
PspGI CCWGG 2 cut(s) 237, 1686
PspPI GGNCC 9 cut(s) 186, 848, 1195, 1361, 1454, 1589, 1622, 1912, 2080
PspPPI RGGWCCY 3 cut(s) 1195, 1622, 2080
PstI CTGCAG 1 cut(s) 770
PstNI CAGNNNCTG 2 cut(s) 244, 765
PsuI RGATCY 5 cut(s) 166, 272, 823, 917, 1690
RruI TCGCGA 1 cut(s) 1812
RsaI GTAC 2 cut(s) 1027, 1714
RsaNI GTAC 2 cut(s) 1026, 1713
RseI CAYNNNNRTG 2 cut(s) 1509, 1885
SacI GAGCTC 3 cut(s) 435, 1767, 1977
SapI GCTCTTC 1 cut(s) 600
SaqAI TTAA 7 cut(s) 338, 510, 524, 752, 1517, 1718, 2054
SatI GCNGC 5 cut(s) 25, 245, 520, 559, 1781
Sau3AI GATC 8 cut(s) 166, 272, 790, 823, 917, 1048, 1690, 2116
Sau96I GGNCC 9 cut(s) 186, 848, 1195, 1361, 1454, 1589, 1622, 1912, 2080
ScrFI CCNGG 4 cut(s) 136, 239, 1688, 2001
SduI GDGCHC 6 cut(s) 203, 435, 609, 1662, 1767, 1977
SfaNI GCATC 4 cut(s) 88, 1316, 1458, 1557
SfcI CTRYAG 2 cut(s) 766, 1738
Sfr274I CTCGAG 1 cut(s) 1976
SinI GGWCC 7 cut(s) 186, 848, 1195, 1361, 1589, 1622, 2080
SlaI CTCGAG 1 cut(s) 1976
SmiMI CAYNNNNRTG 2 cut(s) 1509, 1885
SmlI CTYRAG 3 cut(s) 337, 1111, 1976
SmoI CTYRAG 3 cut(s) 337, 1111, 1976
SphI GCATGC 1 cut(s) 1514
SsiI CCGC 5 cut(s) 65, 519, 558, 591, 915
SspMI CTAG 5 cut(s) 59, 821, 1035, 1146, 1395
SstI GAGCTC 3 cut(s) 435, 1767, 1977
StyD4I CCNGG 4 cut(s) 134, 237, 1686, 1999
StyI CCWWGG 1 cut(s) 1744
TaaI ACNGT 2 cut(s) 989, 2154
TaiI ACGT 4 cut(s) 377, 1718, 2093, 2106
TaqI TCGA 4 cut(s) 684, 1605, 1977, 2066
TaqII GACCGA 1 cut(s) 865
TatI WGTACW 1 cut(s) 1025
TauI GCSGC 2 cut(s) 522, 561
TfiI GAWTC 7 cut(s) 131, 262, 712, 835, 1090, 1205, 1576
Tru1I TTAA 7 cut(s) 338, 510, 524, 752, 1517, 1718, 2054
Tru9I TTAA 7 cut(s) 338, 510, 524, 752, 1517, 1718, 2054
TscAI CASTG 4 cut(s) 117, 1260, 2047, 2131
TseFI GTSAC 1 cut(s) 1105
TseI GCWGC 3 cut(s) 24, 244, 1780
Tsp45I GTSAC 1 cut(s) 1105
TspDTI ATGAA 6 cut(s) 313, 554, 590, 1032, 1284, 2049
TspRI CASTG 4 cut(s) 117, 1260, 2047, 2131
Van91I CCANNNNNTGG 1 cut(s) 863
Vha464I CTTAAG 1 cut(s) 337
VpaK11BI GGWCC 7 cut(s) 186, 848, 1195, 1361, 1589, 1622, 2080
XapI RAATTY 2 cut(s) 564, 1565
XbaI TCTAGA 1 cut(s) 820
XceI RCATGY 3 cut(s) 236, 1251, 1514
XhoI CTCGAG 1 cut(s) 1976
XmnI GAANNNNTTC 6 cut(s) 733, 1275, 1481, 1580, 1870, 1890
XspI CTAG 5 cut(s) 59, 821, 1035, 1146, 1395
Zsp2I ATGCAT 2 cut(s) 103, 1516
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.