RchiOBHm_Chr3g0460051
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0002297
Physical Location & Seq
Reverse (-)
8319322 .. 8326191
6870 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ42659

Sequence Viewer

Length: 2859 bp
ATGTTGAGACTGAGATTTTGGGGTTGCCTCATTGGTCTGGCTTGTTCTTGCTTCTTCCTAGTTGCGGTTGCACAAGTTACTAATCCTTCTGAAGTGGATGCATTGAGAGCAGTGAAGGATAGTCTGATTGATTCCGGGAAGCATTTGGGGAATTGGGACAAAGGGGATCCATGTAAAGCGAATTGGACCGGAATTTTGTGCTCCGGTGATGTTGGGACTGATGGATACTTGCATGTCCAGGAGCTGCAACTGCTAAGTAAGAATCTCTCAGGAACTTTAGCGCCTGAGCTTGGCAAACTATCTCAACTTCTGATATTAGATTTCATGTGGAATAACTTAAGTGGGACTATACCGAAGGAGATAGGAAATATTACGTCCTTGAAACTCTTGCTCTTGAATGGAAACAAACTATCGGGTTCCTTGCCTGATGAGCTCGGTAATCTTGAAAATCTGCATAGACTACAAGTTGACCAGAACCATCTTTCAGGTTCAATACCAAAATCATTTGTTAACTTGCGCGGCTTAAGACACCTCCATATGAACAACAACTCCTTCAGTGGCCAAATTCCATCTGAGATTTCTGAAATACCTGCTCTTCTTCATGTGCTCTTGGATAATAATAAATTATCTGGATATCTTCCACAAGAATTCTCCAACATTCCAGGGTTGCGCATACTTCAACTCGATAACAACAACTTCATGGGAACTGAGATTCCAGCAACTTATGGAAACCTTTCCAGATTGGCAAAGTTAAGTCTCAGGAACTGCAGTTTGCAGGGAGCAATTCCTGATCTTAGCCGGATACCTAACCTCAGTTATTTAGATCTAAGCTGGAATCATCTTGCTGGACCAATACCATCACATGGACTTTCTGACAATATGACAACAATTGACCTGTCAGATAATCATCTTAACGGATCTATTCCTGAAGGTTTCTCTCATTTTCCTCATCTTCAGAAATTGTCGCTCGAAAATAATTGGTTGAACGGTTCTGTCCCTGCTATATGGAGGAACATATCTTTTAGTACAAGAGCTAAACTTTCATATGATCTCCGGAACAATTCACTCTCTAACATATTGGGAGAGCTGAATCCTCCAGCAAATGTCACCTTGAGGTTAGAAGGAAATCCTATTTGCAAGAATGCTAGCATAGAAAATATAAGCCCTTTCTGTCAATCTGAAGCGAGAGATGGGATCCCCGAAGATTCAATAAATTCAACTCAACAGATGACCTGCCCTATTCAAGCATGTCCGGTGGATGATTTCTATGAATATGTTCCATCTTCCCCTGTGCCATGCTTTTGTGCATCACCTATTATAGTTGAATATCGTCTGAAAAGCCCGAGCTTTTCTTACTTTCTTCCATATATACAGCAGTTTGAAGAGTATTTAACTAGTTCTCTAAAATTGGAGATTTACCAGTTATCAATTAGTTCCTTTGTCTGGGAAAAAGGGCCTCGTTTACAGATGCATTTGAAGTTCTTCCCTGTGTATGGTGCTTCACACTCGTATAAATTAAATACAAGTGAGGTTCTGCGAATTAGAGGCATCTTTACATCATGGGAATTTCCTCAGAATGATTTCTTTGGACCATATGAACTACTCGACTTCAAACTGCTGGGACCTTATTCAAATATGATTGTCAAGAGACAAAAGATGGGCATCAATAAGGGTGTATTAGCAGCTGTTATAATAGGGGCCATTGCCTCTGTTGTCAGTATATCTGCAACAGTCATGCTTCTGTTCACAAGATGCACCCGAAACCGACATACACCACCTTCAAGGAGACACTCATCGTCGAAGATTTCTATGAGAATTGAAGGTGTAAAGGCGTTCACTTTCAAAGAAATGACACTAGCCACCAGGAACTTTGATAGTGCAACTCAACTTGGACGAGGAGGCTATGGGAAAGTTTATAAAGGTATCTTATCTGATAACACAGCTGTAGCCATAAAACGTGCAGAAGAAGGATCCCTACAGGGTGAAAAAGAATTCTTGACCGAGATAGAATTGTTATCAAGGCTACACCATCGAAACTTAGTCTCTTTGGTAGGATACTGTGAAGAAGAAGGGGAGCAGATGTTGGTTTATGAGTTCATGCCTAATGGTACCTTACGTGACTGGCTTTCTGATAAAACCAAGGGAAGCCTGGACTTCAGTATGAGATTACGCATTGCATTGGGTTCAGCCAAAGGAATTCTTTATCTCCATACCGAGGCAAATCCTCCTATATTCCACCGAGATATTAAAGCCACAAATATACTTTTGGACTCCAACTATATCGCTAAGGTGGCCGATTTTGGACTCTCACGACTAGCACCTGTCCAGAATGATGAAGGGACTGGCCCTGCATACGTATCTACAGTCGTGAGAGGAACACCGGGCTACCTGGATCCAGAGTATTTCTTGACCAGTAAGTTAACAGACAAAAGCGATGTCTATAGCCTTGGAATTGTGTTTCTGGAGCTCTTGACTGGTGTGCTGCCAATATCACATGGCAAAAACATTGTTCGCGAGGTGAATATGGCTCATCAGTCAGGCTTGATTTTCTCCATTATTGATAGCAGAATGGGTTCGTATCCATCTGAATGTGTTCAGAGGTTTGTAGCTTTGGCCCTCAGATGTTGCCATGATAAACAAGACGACCGGCCATCAATGTTGGATGTGGTGAGGGAGCTCGAGAACATAATCAAACTTATGCCGGGAGCTGAAACAATGTTTTCACCATCTGGTTCCTCATACACTGAAAAATCATTAACTTCATCATCGACTTTTACTGGGGACCCATATATGTCCTCCTCCAACGTGGAAGGAAGTGATCTAACCAGTGGTGTAATCCCTACCATCTCACCTCGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

952

Amino Acids

105.49

Weight (kDa)

6.39

Isoelectric Point (pI)

41.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 29 - 68 4.7e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 93 - 194 4e-09 Leucine-rich repeat region
LRR_14 PF23598 169 - 348 2.5e-07 Leucine-rich repeat region
Pkinase PF00069 626 - 891 1.6e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 628 - 893 2.9e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1691, 1917
Acc16I TGCGCA 1 cut(s) 671
Acc36I ACCTGC 2 cut(s) 598, 1241
Acc65I GGTACC 1 cut(s) 2108
AccB1I GGYRCC 1 cut(s) 2108
AccB7I CCANNNNNTGG 1 cut(s) 863
AccII CGCG 2 cut(s) 519, 2514
AccIII TCCGGA 1 cut(s) 1053
AciI CCGC 2 cut(s) 65, 519
AclWI GGATC 9 cut(s) 161, 174, 925, 1189, 1202, 1965, 1978, 2387, 2400
AcoI YGGCCR 3 cut(s) 559, 2292, 2648
AcsI RAATTY 7 cut(s) 192, 564, 647, 1213, 1565, 1991, 2196
AcuI CTGAAG 6 cut(s) 111, 538, 938, 948, 1200, 2140
AfaI GTAC 2 cut(s) 1027, 2110
AfiI CCNNNNNNNGG 6 cut(s) 64, 290, 863, 1443, 1493, 2215
AflII CTTAAG 2 cut(s) 337, 523
AhlI ACTAGT 1 cut(s) 1394
AjnI CCWGG 5 cut(s) 237, 661, 1862, 2148, 2388
AleI CACNNNNGTG 1 cut(s) 2854
AloI GAACNNNNNNTCC 4 cut(s) 533, 565, 697, 729
Alw21I GWGCWC 5 cut(s) 203, 435, 609, 2469, 2679
Alw26I GTCTC 4 cut(s) 761, 1642, 1780, 2047
AlwI GGATC 9 cut(s) 161, 174, 925, 1189, 1202, 1965, 1978, 2387, 2400
AlwNI CAGNNNCTG 2 cut(s) 244, 765
Ama87I CYCGRG 2 cut(s) 1342, 2678
Aor13HI TCCGGA 1 cut(s) 1053
AoxI GGCC 7 cut(s) 559, 1454, 1698, 2292, 2344, 2613, 2648
ApeKI GCWGC 3 cut(s) 244, 1682, 2482
ApoI RAATTY 7 cut(s) 192, 564, 647, 1213, 1565, 1991, 2196
ArsI GACNNNNNNTTYG 5 cut(s) 32, 178, 210, 2421, 2453
Asp700I GAANNNNTTC 6 cut(s) 733, 1275, 1481, 1580, 2572, 2592
Asp718I GGTACC 1 cut(s) 2108
AspLEI GCGC 3 cut(s) 283, 519, 672
AspS9I GGNCC 9 cut(s) 186, 848, 1454, 1589, 1622, 1698, 2345, 2614, 2782
AsuC2I CCSGG 3 cut(s) 136, 2382, 2703
AsuHPI GGTGA 8 cut(s) 218, 1099, 1302, 1994, 2530, 2680, 2715, 2841
AsuNHI GCTAGC 1 cut(s) 1145
AvaI CYCGRG 2 cut(s) 1342, 2678
AvaII GGWCC 5 cut(s) 186, 848, 1589, 1622, 2782
BalI TGGCCA 1 cut(s) 561
BamHI GGATCC 4 cut(s) 166, 1194, 1970, 2392
BanI GGYRCC 1 cut(s) 2108
BanII GRGCYC 3 cut(s) 435, 2469, 2679
BarI GAAGNNNNNNTAC 2 cut(s) 1959, 1991
Bbv12I GWGCWC 5 cut(s) 203, 435, 609, 2469, 2679
BbvI GCAGC 3 cut(s) 231, 1694, 2469
BciT130I CCWGG 5 cut(s) 239, 663, 1864, 2150, 2390
BciVI GTATCC 4 cut(s) 218, 795, 2048, 2589
BcnI CCSGG 3 cut(s) 136, 2382, 2703
BcoDI GTCTC 4 cut(s) 761, 1642, 1780, 2047
BcuI ACTAGT 1 cut(s) 1394
BfaI CTAG 5 cut(s) 59, 1146, 1395, 1856, 2315
BfmI CTRYAG 5 cut(s) 766, 1944, 1976, 2361, 2440
BfoI RGCGCY 1 cut(s) 284
BfrI CTTAAG 2 cut(s) 337, 523
BfuAI ACCTGC 2 cut(s) 598, 1241
BfuI GTATCC 4 cut(s) 218, 795, 2048, 2589
BglII AGATCT 1 cut(s) 823
BisI GCNGC 4 cut(s) 245, 520, 1683, 2483
BlsI GCNGC 4 cut(s) 246, 521, 1684, 2484
Bme1390I CCNGG 8 cut(s) 136, 239, 663, 1864, 2150, 2382, 2390, 2703
Bme18I GGWCC 5 cut(s) 186, 848, 1589, 1622, 2782
BmeT110I CYCGRG 2 cut(s) 1342, 2678
BmgT120I GGNCC 9 cut(s) 186, 848, 1454, 1589, 1622, 1698, 2345, 2614, 2782
BmrFI CCNGG 8 cut(s) 136, 239, 663, 1864, 2150, 2382, 2390, 2703
BmrI ACTGGG 1 cut(s) 2787
BmsI GCATC 6 cut(s) 88, 1316, 1458, 1557, 1671, 1742
BmtI GCTAGC 1 cut(s) 1149
BmuI ACTGGG 1 cut(s) 2787
BpmI CTGGAG 2 cut(s) 1080, 2483
Bpu10I CCTNAGC 2 cut(s) 285, 2286
BpuEI CTTGAG 1 cut(s) 1132
BpuMI CCSGG 3 cut(s) 136, 2382, 2703
BsaAI YACGTR 2 cut(s) 2117, 2356
BsaBI GATNNNNATC 2 cut(s) 906, 1661
BsaJI CCNNGG 5 cut(s) 662, 2139, 2214, 2446, 2852
BsaWI WCCGGW 4 cut(s) 188, 203, 1053, 1252
BsaXI ACNNNNNCTCC 4 cut(s) 533, 563, 2066, 2096
Bsc4I CCNNNNNNNGG 6 cut(s) 64, 290, 863, 1443, 1493, 2215
Bse118I RCCGGY 1 cut(s) 2646
Bse1I ACTGG 7 cut(s) 1420, 2126, 2347, 2412, 2479, 2782, 2826
Bse3DI GCAATG 2 cut(s) 1701, 2172
Bse8I GATNNNNATC 2 cut(s) 906, 1661
BseAI TCCGGA 1 cut(s) 1053
BseBI CCWGG 5 cut(s) 239, 663, 1864, 2150, 2390
BseDI CCNNGG 5 cut(s) 662, 2139, 2214, 2446, 2852
BseGI GGATG 3 cut(s) 103, 1264, 2668
BseJI GATNNNNATC 2 cut(s) 906, 1661
BseLI CCNNNNNNNGG 6 cut(s) 64, 290, 863, 1443, 1493, 2215
BseMI GCAATG 2 cut(s) 1701, 2172
BseMII CTCAG 8 cut(s) 276, 282, 564, 699, 772, 826, 1586, 2632
BseNI ACTGG 7 cut(s) 1420, 2126, 2347, 2412, 2479, 2782, 2826
BseRI GAGGAG 2 cut(s) 1911, 2788
BseXI GCAGC 3 cut(s) 231, 1694, 2469
BseYI CCCAGC 1 cut(s) 1618
BsgI GTGCAG 1 cut(s) 1980
Bsh1236I CGCG 2 cut(s) 519, 2514
Bsh1285I CGRYCG 1 cut(s) 2647
BshFI GGCC 7 cut(s) 561, 1456, 1700, 2294, 2346, 2615, 2650
BshNI GGYRCC 1 cut(s) 2108
BsiEI CGRYCG 1 cut(s) 2647
BsiHKAI GWGCWC 5 cut(s) 203, 435, 609, 2469, 2679
BsiHKCI CYCGRG 2 cut(s) 1342, 2678
BsiSI CCGG 9 cut(s) 135, 189, 204, 799, 1054, 1253, 2381, 2647, 2702
BslFI GGGAC 7 cut(s) 170, 229, 358, 980, 1635, 2353, 2795
BslI CCNNNNNNNGG 6 cut(s) 64, 290, 863, 1443, 1493, 2215
BsmAI GTCTC 4 cut(s) 761, 1642, 1780, 2047
BsmFI GGGAC 7 cut(s) 170, 229, 358, 980, 1635, 2353, 2795
BsmI GAATGC 1 cut(s) 1147
BsnI GGCC 7 cut(s) 561, 1456, 1700, 2294, 2346, 2615, 2650
BsoBI CYCGRG 2 cut(s) 1342, 2678
Bsp1286I GDGCHC 5 cut(s) 203, 435, 609, 2469, 2679
Bsp13I TCCGGA 1 cut(s) 1053
Bsp143I GATC 9 cut(s) 166, 790, 823, 917, 1048, 1194, 1970, 2392, 2818
Bsp68I TCGCGA 1 cut(s) 2514
BspACI CCGC 2 cut(s) 65, 519
BspANI GGCC 7 cut(s) 561, 1456, 1700, 2294, 2346, 2615, 2650
BspCNI CTCAG 8 cut(s) 277, 281, 565, 700, 771, 825, 1585, 2631
BspEI TCCGGA 1 cut(s) 1053
BspFNI CGCG 2 cut(s) 519, 2514
BspMAI CTGCAG 1 cut(s) 770
BspMI ACCTGC 2 cut(s) 598, 1241
BspOI GCTAGC 1 cut(s) 1149
BspPI GGATC 9 cut(s) 161, 174, 925, 1189, 1202, 1965, 1978, 2387, 2400
BspQI GCTCTTC 1 cut(s) 600
BspT107I GGYRCC 1 cut(s) 2108
BspTI CTTAAG 2 cut(s) 337, 523
BsrDI GCAATG 2 cut(s) 1701, 2172
BsrFI RCCGGY 1 cut(s) 2646
BsrI ACTGG 7 cut(s) 1420, 2126, 2347, 2412, 2479, 2782, 2826
BssAI RCCGGY 1 cut(s) 2646
BssECI CCNNGG 5 cut(s) 662, 2139, 2214, 2446, 2852
BssMI GATC 9 cut(s) 166, 790, 823, 917, 1048, 1194, 1970, 2392, 2818
BssT1I CCWWGG 2 cut(s) 2139, 2446
Bst2UI CCWGG 5 cut(s) 239, 663, 1864, 2150, 2390
Bst4CI ACNGT 4 cut(s) 989, 1732, 2060, 2365
Bst6I CTCTTC 2 cut(s) 600, 1377
BstAFI CTTAAG 2 cut(s) 337, 523
BstBAI YACGTR 2 cut(s) 2117, 2356
BstC8I GCNNGC 1 cut(s) 1147
BstF5I GGATG 3 cut(s) 103, 1264, 2668
BstFNI CGCG 2 cut(s) 519, 2514
BstH2I RGCGCY 1 cut(s) 284
BstHHI GCGC 3 cut(s) 283, 519, 672
BstKTI GATC 9 cut(s) 169, 793, 826, 920, 1051, 1197, 1973, 2395, 2821
BstMAI GTCTC 4 cut(s) 761, 1642, 1780, 2047
BstMBI GATC 9 cut(s) 166, 790, 823, 917, 1048, 1194, 1970, 2392, 2818
BstMCI CGRYCG 1 cut(s) 2647
BstMWI GCNNNNNNNGC 4 cut(s) 107, 250, 430, 2291
BstNI CCWGG 5 cut(s) 239, 663, 1864, 2150, 2390
BstNSI RCATGY 2 cut(s) 236, 1251
BstSCI CCNGG 8 cut(s) 134, 237, 661, 1862, 2148, 2380, 2388, 2701
BstSFI CTRYAG 5 cut(s) 766, 1944, 1976, 2361, 2440
BstSNI TACGTA 1 cut(s) 2356
BstUI CGCG 2 cut(s) 519, 2514
BstV1I GCAGC 3 cut(s) 231, 1694, 2469
BstX2I RGATCY 6 cut(s) 166, 823, 917, 1194, 1970, 2392
BstYI RGATCY 6 cut(s) 166, 823, 917, 1194, 1970, 2392
BsuI GTATCC 4 cut(s) 218, 795, 2048, 2589
BsuRI GGCC 7 cut(s) 561, 1456, 1700, 2294, 2346, 2615, 2650
BtgZI GCGATG 1 cut(s) 2448
BtsCI GGATG 3 cut(s) 103, 1264, 2668
BtsI GCAGTG 1 cut(s) 117
BtsIMutI CAGTG 4 cut(s) 117, 562, 2742, 2833
BtuMI TCGCGA 1 cut(s) 2514
BveI ACCTGC 2 cut(s) 598, 1241
Cac8I GCNNGC 1 cut(s) 1147
CaiI CAGNNNCTG 2 cut(s) 244, 765
CfoI GCGC 3 cut(s) 283, 519, 672
Cfr10I RCCGGY 1 cut(s) 2646
Cfr13I GGNCC 9 cut(s) 186, 848, 1454, 1589, 1622, 1698, 2345, 2614, 2782
Csp6I GTAC 2 cut(s) 1026, 2109
CviQI GTAC 2 cut(s) 1026, 2109
DpnI GATC 9 cut(s) 168, 792, 825, 919, 1050, 1196, 1972, 2394, 2820
DpnII GATC 9 cut(s) 166, 790, 823, 917, 1048, 1194, 1970, 2392, 2818
EaeI YGGCCR 3 cut(s) 559, 2292, 2648
Eam1104I CTCTTC 2 cut(s) 600, 1377
EarI CTCTTC 2 cut(s) 600, 1377
Ecl136II GAGCTC 3 cut(s) 433, 2467, 2677
Eco105I TACGTA 1 cut(s) 2356
Eco130I CCWWGG 2 cut(s) 2139, 2446
Eco24I GRGCYC 3 cut(s) 435, 2469, 2679
Eco32I GATATC 1 cut(s) 635
Eco47I GGWCC 5 cut(s) 186, 848, 1589, 1622, 2782
Eco53kI GAGCTC 3 cut(s) 433, 2467, 2677
Eco57I CTGAAG 6 cut(s) 111, 538, 938, 948, 1200, 2140
Eco88I CYCGRG 2 cut(s) 1342, 2678
EcoICRI GAGCTC 3 cut(s) 433, 2467, 2677
EcoO109I RGGNCCY 3 cut(s) 1454, 1622, 2782
EcoRI GAATTC 3 cut(s) 647, 1991, 2196
EcoRII CCWGG 5 cut(s) 237, 661, 1862, 2148, 2388
EcoRV GATATC 1 cut(s) 635
EcoT14I CCWWGG 2 cut(s) 2139, 2446
EcoT22I ATGCAT 2 cut(s) 103, 1473
EcoT38I GRGCYC 3 cut(s) 435, 2469, 2679
ErhI CCWWGG 2 cut(s) 2139, 2446
FalI AAGNNNNNCTT 2 cut(s) 2184, 2216
FaqI GGGAC 7 cut(s) 170, 229, 358, 980, 1635, 2353, 2795
FauNDI CATATG 3 cut(s) 537, 1045, 1594
Fnu4HI GCNGC 4 cut(s) 245, 520, 1683, 2483
FokI GGATG 3 cut(s) 110, 1271, 2675
FriOI GRGCYC 3 cut(s) 435, 2469, 2679
Fsp4HI GCNGC 4 cut(s) 245, 520, 1683, 2483
FspBI CTAG 5 cut(s) 59, 1146, 1395, 1856, 2315
FspI TGCGCA 1 cut(s) 671
GlaI GCGC 3 cut(s) 282, 518, 671
GluI GCNGC 4 cut(s) 245, 520, 1683, 2483
GsaI CCCAGC 1 cut(s) 1622
GsuI CTGGAG 2 cut(s) 1080, 2483
HaeII RGCGCY 1 cut(s) 284
HaeIII GGCC 7 cut(s) 561, 1456, 1700, 2294, 2346, 2615, 2650
HapII CCGG 9 cut(s) 135, 189, 204, 799, 1054, 1253, 2381, 2647, 2702
HhaI GCGC 3 cut(s) 283, 519, 672
Hin6I GCGC 3 cut(s) 281, 517, 670
HinP1I GCGC 3 cut(s) 281, 517, 670
HincII GTYRAC 3 cut(s) 469, 511, 2421
HindII GTYRAC 3 cut(s) 469, 511, 2421
HinfI GANTC 8 cut(s) 131, 262, 712, 835, 1090, 1205, 2270, 2304
HpaI GTTAAC 2 cut(s) 511, 2421
HpaII CCGG 9 cut(s) 135, 189, 204, 799, 1054, 1253, 2381, 2647, 2702
HphI GGTGA 8 cut(s) 218, 1099, 1302, 1994, 2530, 2680, 2715, 2841
Hpy166II GTNNAC 6 cut(s) 469, 511, 1463, 1746, 1836, 2421
Hpy8I GTNNAC 6 cut(s) 469, 511, 1463, 1746, 1836, 2421
Hpy99I CGWCG 1 cut(s) 1801
HpyCH4III ACNGT 4 cut(s) 989, 1732, 2060, 2365
HpyCH4IV ACGT 5 cut(s) 374, 1957, 2116, 2355, 2805
HpyF10VI GCNNNNNNNGC 4 cut(s) 107, 250, 430, 2291
HpySE526I ACGT 5 cut(s) 374, 1957, 2116, 2355, 2805
HspAI GCGC 3 cut(s) 281, 517, 670
KflI GGGWCCC 1 cut(s) 2782
Kpn2I TCCGGA 1 cut(s) 1053
KpnI GGTACC 1 cut(s) 2112
KspAI GTTAAC 2 cut(s) 511, 2421
Kzo9I GATC 9 cut(s) 166, 790, 823, 917, 1048, 1194, 1970, 2392, 2818
LguI GCTCTTC 1 cut(s) 600
LmnI GCTCC 7 cut(s) 206, 241, 779, 2074, 2464, 2674, 2705
Lsp1109I GCAGC 3 cut(s) 231, 1694, 2469
LweI GCATC 6 cut(s) 88, 1316, 1458, 1557, 1671, 1742
MaeI CTAG 5 cut(s) 59, 1146, 1395, 1856, 2315
MaeII ACGT 5 cut(s) 374, 1957, 2116, 2355, 2805
MaeIII GTNAC 3 cut(s) 76, 1105, 2117
MalI GATC 9 cut(s) 168, 792, 825, 919, 1050, 1196, 1972, 2394, 2820
MboI GATC 9 cut(s) 166, 790, 823, 917, 1048, 1194, 1970, 2392, 2818
MfeI CAATTG 1 cut(s) 888
MflI RGATCY 6 cut(s) 166, 823, 917, 1194, 1970, 2392
MhlI GDGCHC 5 cut(s) 203, 435, 609, 2469, 2679
MlsI TGGCCA 1 cut(s) 561
MluNI TGGCCA 1 cut(s) 561
MlyI GAGTC 2 cut(s) 2264, 2298
MmeI TCCRAC 4 cut(s) 678, 2298, 2640, 2826
Mox20I TGGCCA 1 cut(s) 561
Mph1103I ATGCAT 2 cut(s) 103, 1473
MroI TCCGGA 1 cut(s) 1053
MroXI GAANNNNTTC 6 cut(s) 733, 1275, 1481, 1580, 2572, 2592
MscI TGGCCA 1 cut(s) 561
MslI CAYNNNNRTG 2 cut(s) 2587, 2854
Msp20I TGGCCA 1 cut(s) 561
MspA1I CMGCKG 2 cut(s) 1685, 1943
MspCI CTTAAG 2 cut(s) 337, 523
MspI CCGG 9 cut(s) 135, 189, 204, 799, 1054, 1253, 2381, 2647, 2702
MspR9I CCNGG 8 cut(s) 136, 239, 663, 1864, 2150, 2382, 2390, 2703
MunI CAATTG 1 cut(s) 888
Mva1269I GAATGC 1 cut(s) 1147
MvaI CCWGG 5 cut(s) 239, 663, 1864, 2150, 2390
MvnI CGCG 2 cut(s) 519, 2514
MwoI GCNNNNNNNGC 4 cut(s) 107, 250, 430, 2291
NciI CCSGG 3 cut(s) 136, 2382, 2703
NdeI CATATG 3 cut(s) 537, 1045, 1594
NdeII GATC 9 cut(s) 166, 790, 823, 917, 1048, 1194, 1970, 2392, 2818
NheI GCTAGC 1 cut(s) 1145
NmuCI GTSAC 2 cut(s) 1105, 2117
NruI TCGCGA 1 cut(s) 2514
NsbI TGCGCA 1 cut(s) 671
NsiI ATGCAT 2 cut(s) 103, 1473
NspI RCATGY 2 cut(s) 236, 1251
OliI CACNNNNGTG 1 cut(s) 2854
PaeR7I CTCGAG 1 cut(s) 2678
PciSI GCTCTTC 1 cut(s) 600
PctI GAATGC 1 cut(s) 1147
PdmI GAANNNNTTC 6 cut(s) 733, 1275, 1481, 1580, 2572, 2592
PfeI GAWTC 6 cut(s) 131, 262, 712, 835, 1090, 1205
PflMI CCANNNNNTGG 1 cut(s) 863
PfoI TCCNGGA 2 cut(s) 134, 237
PkrI GCNGC 4 cut(s) 246, 521, 1684, 2484
PleI GAGTC 2 cut(s) 2264, 2298
PpsI GAGTC 2 cut(s) 2264, 2298
Ppu21I YACGTR 2 cut(s) 2117, 2356
PpuMI RGGWCCY 2 cut(s) 1622, 2782
PsiI TTATAA 2 cut(s) 1691, 1917
Psp124BI GAGCTC 3 cut(s) 435, 2469, 2679
Psp5II RGGWCCY 2 cut(s) 1622, 2782
Psp6I CCWGG 5 cut(s) 237, 661, 1862, 2148, 2388
PspFI CCCAGC 1 cut(s) 1618
PspGI CCWGG 5 cut(s) 237, 661, 1862, 2148, 2388
PspPI GGNCC 9 cut(s) 186, 848, 1454, 1589, 1622, 1698, 2345, 2614, 2782
PspPPI RGGWCCY 2 cut(s) 1622, 2782
PstI CTGCAG 1 cut(s) 770
PstNI CAGNNNCTG 2 cut(s) 244, 765
PsuI RGATCY 6 cut(s) 166, 823, 917, 1194, 1970, 2392
PvuII CAGCTG 2 cut(s) 1685, 1943
RruI TCGCGA 1 cut(s) 2514
RsaI GTAC 2 cut(s) 1027, 2110
RsaNI GTAC 2 cut(s) 1026, 2109
RseI CAYNNNNRTG 2 cut(s) 2587, 2854
SacI GAGCTC 3 cut(s) 435, 2469, 2679
SapI GCTCTTC 1 cut(s) 600
SatI GCNGC 4 cut(s) 245, 520, 1683, 2483
Sau3AI GATC 9 cut(s) 166, 790, 823, 917, 1048, 1194, 1970, 2392, 2818
Sau96I GGNCC 9 cut(s) 186, 848, 1454, 1589, 1622, 1698, 2345, 2614, 2782
SchI GAGTC 2 cut(s) 2264, 2298
ScrFI CCNGG 8 cut(s) 136, 239, 663, 1864, 2150, 2382, 2390, 2703
SduI GDGCHC 5 cut(s) 203, 435, 609, 2469, 2679
SfaNI GCATC 6 cut(s) 88, 1316, 1458, 1557, 1671, 1742
SfcI CTRYAG 5 cut(s) 766, 1944, 1976, 2361, 2440
Sfr274I CTCGAG 1 cut(s) 2678
SinI GGWCC 5 cut(s) 186, 848, 1589, 1622, 2782
SlaI CTCGAG 1 cut(s) 2678
SmiMI CAYNNNNRTG 2 cut(s) 2587, 2854
SmlI CTYRAG 4 cut(s) 337, 523, 1111, 2678
SmoI CTYRAG 4 cut(s) 337, 523, 1111, 2678
SnaBI TACGTA 1 cut(s) 2356
SpeI ACTAGT 1 cut(s) 1394
SsiI CCGC 2 cut(s) 65, 519
SspI AATATT 1 cut(s) 370
SspMI CTAG 5 cut(s) 59, 1146, 1395, 1856, 2315
SstI GAGCTC 3 cut(s) 435, 2469, 2679
StyD4I CCNGG 8 cut(s) 134, 237, 661, 1862, 2148, 2380, 2388, 2701
StyI CCWWGG 2 cut(s) 2139, 2446
TaaI ACNGT 4 cut(s) 989, 1732, 2060, 2365
TaiI ACGT 5 cut(s) 377, 1960, 2119, 2358, 2808
TaqI TCGA 7 cut(s) 684, 969, 1605, 1799, 2032, 2679, 2768
TaqII GACCGA 1 cut(s) 2015
TatI WGTACW 1 cut(s) 1025
TauI GCSGC 1 cut(s) 522
TfiI GAWTC 6 cut(s) 131, 262, 712, 835, 1090, 1205
TscAI CASTG 4 cut(s) 117, 562, 2749, 2833
TseFI GTSAC 2 cut(s) 1105, 2117
TseI GCWGC 3 cut(s) 244, 1682, 2482
Tsp45I GTSAC 2 cut(s) 1105, 2117
TspGWI ACGGA 1 cut(s) 930
TspRI CASTG 4 cut(s) 117, 562, 2749, 2833
Van91I CCANNNNNTGG 1 cut(s) 863
Vha464I CTTAAG 2 cut(s) 337, 523
VpaK11BI GGWCC 5 cut(s) 186, 848, 1589, 1622, 2782
XapI RAATTY 7 cut(s) 192, 564, 647, 1213, 1565, 1991, 2196
XceI RCATGY 2 cut(s) 236, 1251
XcmI CCANNNNNNNNNTGG 1 cut(s) 2146
XhoI CTCGAG 1 cut(s) 2678
XmnI GAANNNNTTC 6 cut(s) 733, 1275, 1481, 1580, 2572, 2592
XspI CTAG 5 cut(s) 59, 1146, 1395, 1856, 2315
Zsp2I ATGCAT 2 cut(s) 103, 1473
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.