Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0013658.1

Orthogroup ID

OG0002297

Physical Location & Seq

Genomic Coordinates Reverse (-)

12063 .. 18714

Gene Structure 6652 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0013658.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2718 bp

atgttgagactgatattttggggttgcctcattggtctggcttgttcttgcttcttcctagttgcggttgcacaagttactaatccttctgaagtggatgcattgagagcagtgaagggttgtctgattgattccgggaatcatttggggaattgggacaaaggggacccatgtaaagccaattggaccggaattttgtgctccggtgatgttgggactgatggatacttgcatgtccaggagctgcaactgctaagtaagaatctctcaggaactttagcgcctgagcttggcaaactatctcaacttctgatattagatttcatgtggaataacttaagtgggactataccgaaggagataggaaacattacgtccttgaaactcttgctcttgaatggaaacaaactatcgggttccttgcctgatgagctcggtaatcttgaaaatctacatagactacaagttgaccagaaccatctttcaggttcaataccaaactcatttgttaacttgcgcggcttaagacacctccatatgaacaacaactccttcagtggccaaattccatctgagatttctgaaatacctgctcttcttcatgtgctcttggataataataaattatctggatatcttccacaagaattctccaacattccagggttgcgcatacttcaactcgataacaacaacttcatgggaactgagattccagcaacttatggaaacctttccagattggcaaagttaagtctcaggaactgcagtttgcagggagcaattcctgatcttagccggatacgtaacctcagttatctatcgctcgaaaataattggttgaacggttctgtccgtgctatatggaggaacatatcttttagtacaagagctaaactttcatttgatctccggaacaattcactctctaacatattgggagagctgaatcctccagcaaatgtcaccttgaggctagaaggaaatcctatttgcaagaatgctagcatagaaaatataagcccgttctgtcaatctgaagcgagagatgggatccccgaagattcaataaattcaactcaacagatgacctgccctattcaagcatgtccagtggatgatttctatgaatatgttccatcttcccctctgccatgcttttgtgcatcacctattatagttgagtatcgtctgaaaagcccgagcttttcttactttcttccatatatacagcagtttgaagagtatttaactagttctctaaaattggagatttaccagttatcaattagttcctttgtctgggaaaaagggcctcgtttacggatgcatttgaagttcttccctgtgtatggtgcttcacactcgtatacattaaatgaaagtgaggttctgcgaattagaggcatctttacatcatgggaatttcctcagaatgatttctttggaccatatgaactactcgacttcaaactgctgggaccttattcaaatatgattgtcaggacacaaaagatgggcatcaataagggtgtattagcagctgttataataggggccattgcttctgttgtcagtgtatctgcaacagtcatgcttctgttcacaagatgcacccgaaaccgacacacaccaccttcaaggagacactcatcgtcgaagatttctatgagaattgaaggtgtaaaggcgttcactttcaaagaaatgacactagccaccaggaactttgatagtgcaactcaacttggacgaggaggctatgggaaagtttataaaggtatcttatctgataatacagctgtagccataaaacgtgcagaagaaggatccctacagggtgaaaaagaattcttgaccgagatagaattgttatcaaggctacaccatcgaaacttagtctctttggtaggatactgtgaagaagaacgggagcagatgttggtttatgagttcatgcctaatggtaccttacgtgactggctttctgataaaaccaagggaagcctggacttcagtatgagattacgtattgcattgggttcagccaaaggaattctttatctccataccgaggcaaatcctcctatattccaccgagatattaaagccacaaatatacttttggactccaactatatcgctaaggtggccgattttggactctcacgactagcacctgtccagaatgatgaagggactggccctgcatacgtatctacagtcgtgagaggaacaccgggctacctggatccagagtatttcttgaccagtaagttaacagacaaaagcgatgtctatagccttggaattgtgtttctggagctcttgactggtgtgctgccaatatcacatggcaaaaacattgttcgcgaggtgaatatggctcatcagtcaggcttgatgttctccattatagatagcagaatgggttcgtatccatctgaatgtgttcagaggtttgtagctttggccctcagatgttgccatgataaacaagacgaccggccatcaatgttggatgtggtgagggagctcgagaacataatcaaacttatgccgggagctgaaacaatgttttcaccatctggttcctcatacactgaaaaatcattaacttcatcatcgacttttactggggacccatatatgtcctcctccaacgtggaaggaagtgatctaaccagtggtgtaatccctaccatcttgcctcggtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

905

Amino Acids

100.48

Weight (kDa)

6.55

Isoelectric Point (pI)

40.93

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002297)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G01950 AT5G01950 AT5G01950 AT5G01950 AT5G01950 AT5G01950 AT5G01950 AT5G01950
fragaria_vesca	FvH4_6g09451 FvH4_6g09451 FvH4_6g09470 FvH4_6g09470
malus_domestica	MD04G1177400.v1.1 MD12G1192800.v1.1
prunus_persica	Prupe.6G297000_v2.0.a1 Prupe.6G297000_v2.0.a1 Prupe.6G297000_v2.0.a1 Prupe.6G297100_v2.0.a1 Prupe.6G297200_v2.0.a1 Prupe.6G297400_v2.0.a1
pyrus_communis	pycom12g17950
rosa_chinensis	RchiOBHm_Chr3g0459941 RchiOBHm_Chr3g0459991 RchiOBHm_Chr3g0460021 RchiOBHm_Chr3g0460051
rosa_laevigata	RLG00000025048 RLG00000025050
rosa_multiflora	Rmu_sc0000240.1_g000049 Rmu_sc0000240.1_g000076 Rmu_sc0013658.1_g000003 Rmu_sc0030602.1_g000001
rosa_roxburghii	Rroxscaffold_6G00419890 Rroxscaffold_6G00419900
rosa_rugosa	Rorug03G0038900 Rorug03G0039100
rosa_samantha	Rh3BG100400 Rh3BG100600 Rh3CG102200 Rh3CG102400 Rh3CG102700 Rh3DG101900
rosa_wichuraiana	Rw3G008220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1550, 1776
Acc16I	TGCGCA	1 cut(s)	671
Acc36I	ACCTGC	2 cut(s)	598, 1100
Acc65I	GGTACC	1 cut(s)	1967
AccB1I	GGYRCC	1 cut(s)	1967
AccI	GTMKAC	1 cut(s)	1370
AccII	CGCG	2 cut(s)	519, 2373
AccIII	TCCGGA	1 cut(s)	912
AciI	CCGC	2 cut(s)	65, 519
AclWI	GGATC	6 cut(s)	1048, 1061, 1824, 1837, 2246, 2259
AcoI	YGGCCR	3 cut(s)	559, 2151, 2507
AcsI	RAATTY	7 cut(s)	192, 564, 647, 1072, 1424, 1850, 2055
AcuI	CTGAAG	4 cut(s)	111, 538, 1059, 1999
AfaI	GTAC	2 cut(s)	886, 1969
AfiI	CCNNNNNNNGG	5 cut(s)	64, 290, 1302, 1352, 2074
AflII	CTTAAG	2 cut(s)	337, 523
AhlI	ACTAGT	1 cut(s)	1253
AjnI	CCWGG	5 cut(s)	237, 661, 1721, 2007, 2247
AloI	GAACNNNNNNTCC	4 cut(s)	533, 565, 697, 729
Alw21I	GWGCWC	5 cut(s)	203, 435, 609, 2328, 2538
Alw26I	GTCTC	3 cut(s)	761, 1639, 1906
AlwI	GGATC	6 cut(s)	1048, 1061, 1824, 1837, 2246, 2259
AlwNI	CAGNNNCTG	2 cut(s)	244, 765
Ama87I	CYCGRG	2 cut(s)	1201, 2537
Aor13HI	TCCGGA	1 cut(s)	912
AoxI	GGCC	7 cut(s)	559, 1313, 1557, 2151, 2203, 2472, 2507
ApeKI	GCWGC	3 cut(s)	244, 1541, 2341
ApoI	RAATTY	7 cut(s)	192, 564, 647, 1072, 1424, 1850, 2055
ArsI	GACNNNNNNTTYG	5 cut(s)	32, 178, 210, 2280, 2312
Asp700I	GAANNNNTTC	6 cut(s)	733, 1134, 1340, 1439, 2431, 2451
Asp718I	GGTACC	1 cut(s)	1967
AspLEI	GCGC	3 cut(s)	283, 519, 672
AspS9I	GGNCC	9 cut(s)	166, 186, 1313, 1448, 1481, 1557, 2204, 2473, 2641
AsuC2I	CCSGG	3 cut(s)	136, 2241, 2562
AsuHPI	GGTGA	7 cut(s)	218, 958, 1161, 1853, 2389, 2539, 2574
AsuNHI	GCTAGC	1 cut(s)	1004
AvaI	CYCGRG	2 cut(s)	1201, 2537
AvaII	GGWCC	5 cut(s)	166, 186, 1448, 1481, 2641
BalI	TGGCCA	1 cut(s)	561
BamHI	GGATCC	3 cut(s)	1053, 1829, 2251
BanI	GGYRCC	1 cut(s)	1967
BanII	GRGCYC	3 cut(s)	435, 2328, 2538
BarI	GAAGNNNNNNTAC	2 cut(s)	1818, 1850
Bbv12I	GWGCWC	5 cut(s)	203, 435, 609, 2328, 2538
BbvI	GCAGC	3 cut(s)	231, 1553, 2328
BciT130I	CCWGG	5 cut(s)	239, 663, 1723, 2009, 2249
BciVI	GTATCC	4 cut(s)	218, 795, 1907, 2448
BcnI	CCSGG	3 cut(s)	136, 2241, 2562
BcoDI	GTCTC	3 cut(s)	761, 1639, 1906
BcuI	ACTAGT	1 cut(s)	1253
BfaI	CTAG	6 cut(s)	59, 977, 1005, 1254, 1715, 2174
BfmI	CTRYAG	5 cut(s)	766, 1803, 1835, 2220, 2299
BfoI	RGCGCY	1 cut(s)	284
BfrI	CTTAAG	2 cut(s)	337, 523
BfuAI	ACCTGC	2 cut(s)	598, 1100
BfuI	GTATCC	4 cut(s)	218, 795, 1907, 2448
BisI	GCNGC	4 cut(s)	245, 520, 1542, 2342
BlsI	GCNGC	4 cut(s)	246, 521, 1543, 2343
Bme1390I	CCNGG	8 cut(s)	136, 239, 663, 1723, 2009, 2241, 2249, 2562
Bme18I	GGWCC	5 cut(s)	166, 186, 1448, 1481, 2641
BmeT110I	CYCGRG	2 cut(s)	1201, 2537
BmgT120I	GGNCC	9 cut(s)	166, 186, 1313, 1448, 1481, 1557, 2204, 2473, 2641
BmrFI	CCNGG	8 cut(s)	136, 239, 663, 1723, 2009, 2241, 2249, 2562
BmrI	ACTGGG	1 cut(s)	2646
BmsI	GCATC	6 cut(s)	88, 1175, 1317, 1416, 1530, 1601
BmtI	GCTAGC	1 cut(s)	1008
BmuI	ACTGGG	1 cut(s)	2646
BpmI	CTGGAG	2 cut(s)	939, 2342
Bpu10I	CCTNAGC	2 cut(s)	285, 2145
BpuEI	CTTGAG	1 cut(s)	991
BpuMI	CCSGG	3 cut(s)	136, 2241, 2562
BsaAI	YACGTR	4 cut(s)	806, 1976, 2030, 2215
BsaBI	GATNNNNATC	1 cut(s)	1520
BsaJI	CCNNGG	5 cut(s)	662, 1998, 2073, 2305, 2711
BsaWI	WCCGGW	3 cut(s)	188, 203, 912
BsaXI	ACNNNNNCTCC	4 cut(s)	533, 563, 1925, 1955
Bsc4I	CCNNNNNNNGG	5 cut(s)	64, 290, 1302, 1352, 2074
Bse118I	RCCGGY	1 cut(s)	2505
Bse1I	ACTGG	8 cut(s)	1112, 1279, 1985, 2206, 2271, 2338, 2641, 2685
Bse3DI	GCAATG	1 cut(s)	1560
Bse8I	GATNNNNATC	1 cut(s)	1520
BseAI	TCCGGA	1 cut(s)	912
BseBI	CCWGG	5 cut(s)	239, 663, 1723, 2009, 2249
BseDI	CCNNGG	5 cut(s)	662, 1998, 2073, 2305, 2711
BseGI	GGATG	4 cut(s)	103, 1123, 1332, 2527
BseJI	GATNNNNATC	1 cut(s)	1520
BseLI	CCNNNNNNNGG	5 cut(s)	64, 290, 1302, 1352, 2074
BseMI	GCAATG	1 cut(s)	1560
BseMII	CTCAG	8 cut(s)	276, 282, 564, 699, 772, 826, 1445, 2491
BseNI	ACTGG	8 cut(s)	1112, 1279, 1985, 2206, 2271, 2338, 2641, 2685
BseRI	GAGGAG	2 cut(s)	1770, 2647
BseXI	GCAGC	3 cut(s)	231, 1553, 2328
BseYI	CCCAGC	1 cut(s)	1477
BsgI	GTGCAG	1 cut(s)	1839
Bsh1236I	CGCG	2 cut(s)	519, 2373
Bsh1285I	CGRYCG	1 cut(s)	2506
BshFI	GGCC	7 cut(s)	561, 1315, 1559, 2153, 2205, 2474, 2509
BshNI	GGYRCC	1 cut(s)	1967
BsiEI	CGRYCG	1 cut(s)	2506
BsiHKAI	GWGCWC	5 cut(s)	203, 435, 609, 2328, 2538
BsiHKCI	CYCGRG	2 cut(s)	1201, 2537
BsiSI	CCGG	8 cut(s)	135, 189, 204, 799, 913, 2240, 2506, 2561
BslFI	GGGAC	7 cut(s)	170, 179, 229, 358, 1494, 2212, 2654
BslI	CCNNNNNNNGG	5 cut(s)	64, 290, 1302, 1352, 2074
BsmAI	GTCTC	3 cut(s)	761, 1639, 1906
BsmFI	GGGAC	7 cut(s)	170, 179, 229, 358, 1494, 2212, 2654
BsmI	GAATGC	1 cut(s)	1006
BsnI	GGCC	7 cut(s)	561, 1315, 1559, 2153, 2205, 2474, 2509
BsoBI	CYCGRG	2 cut(s)	1201, 2537
Bsp1286I	GDGCHC	5 cut(s)	203, 435, 609, 2328, 2538
Bsp13I	TCCGGA	1 cut(s)	912
Bsp143I	GATC	6 cut(s)	790, 907, 1053, 1829, 2251, 2677
Bsp68I	TCGCGA	1 cut(s)	2373
BspACI	CCGC	2 cut(s)	65, 519
BspANI	GGCC	7 cut(s)	561, 1315, 1559, 2153, 2205, 2474, 2509
BspCNI	CTCAG	8 cut(s)	277, 281, 565, 700, 771, 825, 1444, 2490
BspEI	TCCGGA	1 cut(s)	912
BspFNI	CGCG	2 cut(s)	519, 2373
BspMAI	CTGCAG	1 cut(s)	770
BspMI	ACCTGC	2 cut(s)	598, 1100
BspOI	GCTAGC	1 cut(s)	1008
BspPI	GGATC	6 cut(s)	1048, 1061, 1824, 1837, 2246, 2259
BspQI	GCTCTTC	1 cut(s)	600
BspT107I	GGYRCC	1 cut(s)	1967
BspTI	CTTAAG	2 cut(s)	337, 523
BsrDI	GCAATG	1 cut(s)	1560
BsrFI	RCCGGY	1 cut(s)	2505
BsrI	ACTGG	8 cut(s)	1112, 1279, 1985, 2206, 2271, 2338, 2641, 2685
BssAI	RCCGGY	1 cut(s)	2505
BssECI	CCNNGG	5 cut(s)	662, 1998, 2073, 2305, 2711
BssMI	GATC	6 cut(s)	790, 907, 1053, 1829, 2251, 2677
BssNAI	GTATAC	1 cut(s)	1371
BssT1I	CCWWGG	2 cut(s)	1998, 2305
Bst1107I	GTATAC	1 cut(s)	1371
Bst2UI	CCWGG	5 cut(s)	239, 663, 1723, 2009, 2249
Bst4CI	ACNGT	4 cut(s)	848, 1591, 1919, 2224
Bst6I	CTCTTC	2 cut(s)	600, 1236
BstAFI	CTTAAG	2 cut(s)	337, 523
BstBAI	YACGTR	4 cut(s)	806, 1976, 2030, 2215
BstC8I	GCNNGC	1 cut(s)	1006
BstF5I	GGATG	4 cut(s)	103, 1123, 1332, 2527
BstFNI	CGCG	2 cut(s)	519, 2373
BstH2I	RGCGCY	1 cut(s)	284
BstHHI	GCGC	3 cut(s)	283, 519, 672
BstKTI	GATC	6 cut(s)	793, 910, 1056, 1832, 2254, 2680
BstMAI	GTCTC	3 cut(s)	761, 1639, 1906
BstMBI	GATC	6 cut(s)	790, 907, 1053, 1829, 2251, 2677
BstMCI	CGRYCG	1 cut(s)	2506
BstMWI	GCNNNNNNNGC	4 cut(s)	107, 250, 430, 2150
BstNI	CCWGG	5 cut(s)	239, 663, 1723, 2009, 2249
BstNSI	RCATGY	2 cut(s)	236, 1110
BstSCI	CCNGG	8 cut(s)	134, 237, 661, 1721, 2007, 2239, 2247, 2560
BstSFI	CTRYAG	5 cut(s)	766, 1803, 1835, 2220, 2299
BstSNI	TACGTA	3 cut(s)	806, 2030, 2215
BstUI	CGCG	2 cut(s)	519, 2373
BstV1I	GCAGC	3 cut(s)	231, 1553, 2328
BstX2I	RGATCY	3 cut(s)	1053, 1829, 2251
BstYI	RGATCY	3 cut(s)	1053, 1829, 2251
BstZ17I	GTATAC	1 cut(s)	1371
BsuI	GTATCC	4 cut(s)	218, 795, 1907, 2448
BsuRI	GGCC	7 cut(s)	561, 1315, 1559, 2153, 2205, 2474, 2509
BtgZI	GCGATG	1 cut(s)	2307
BtsCI	GGATG	4 cut(s)	103, 1123, 1332, 2527
BtsI	GCAGTG	1 cut(s)	117
BtsIMutI	CAGTG	6 cut(s)	117, 562, 1119, 1582, 2601, 2692
BtuMI	TCGCGA	1 cut(s)	2373
BveI	ACCTGC	2 cut(s)	598, 1100
Cac8I	GCNNGC	1 cut(s)	1006
CaiI	CAGNNNCTG	2 cut(s)	244, 765
CfoI	GCGC	3 cut(s)	283, 519, 672
Cfr10I	RCCGGY	1 cut(s)	2505
Cfr13I	GGNCC	9 cut(s)	166, 186, 1313, 1448, 1481, 1557, 2204, 2473, 2641
Csp6I	GTAC	2 cut(s)	885, 1968
CviQI	GTAC	2 cut(s)	885, 1968
DpnI	GATC	6 cut(s)	792, 909, 1055, 1831, 2253, 2679
DpnII	GATC	6 cut(s)	790, 907, 1053, 1829, 2251, 2677
EaeI	YGGCCR	3 cut(s)	559, 2151, 2507
Eam1104I	CTCTTC	2 cut(s)	600, 1236
EarI	CTCTTC	2 cut(s)	600, 1236
Ecl136II	GAGCTC	3 cut(s)	433, 2326, 2536
Eco105I	TACGTA	3 cut(s)	806, 2030, 2215
Eco130I	CCWWGG	2 cut(s)	1998, 2305
Eco24I	GRGCYC	3 cut(s)	435, 2328, 2538
Eco32I	GATATC	1 cut(s)	635
Eco47I	GGWCC	5 cut(s)	166, 186, 1448, 1481, 2641
Eco53kI	GAGCTC	3 cut(s)	433, 2326, 2536
Eco57I	CTGAAG	4 cut(s)	111, 538, 1059, 1999
Eco88I	CYCGRG	2 cut(s)	1201, 2537
EcoICRI	GAGCTC	3 cut(s)	433, 2326, 2536
EcoO109I	RGGNCCY	4 cut(s)	166, 1313, 1481, 2641
EcoRI	GAATTC	3 cut(s)	647, 1850, 2055
EcoRII	CCWGG	5 cut(s)	237, 661, 1721, 2007, 2247
EcoRV	GATATC	1 cut(s)	635
EcoT14I	CCWWGG	2 cut(s)	1998, 2305
EcoT22I	ATGCAT	2 cut(s)	103, 1332
EcoT38I	GRGCYC	3 cut(s)	435, 2328, 2538
ErhI	CCWWGG	2 cut(s)	1998, 2305
FalI	AAGNNNNNCTT	2 cut(s)	2043, 2075
FaqI	GGGAC	7 cut(s)	170, 179, 229, 358, 1494, 2212, 2654
FauNDI	CATATG	2 cut(s)	537, 1453
FblI	GTMKAC	1 cut(s)	1370
Fnu4HI	GCNGC	4 cut(s)	245, 520, 1542, 2342
FokI	GGATG	4 cut(s)	110, 1130, 1339, 2534
FriOI	GRGCYC	3 cut(s)	435, 2328, 2538
Fsp4HI	GCNGC	4 cut(s)	245, 520, 1542, 2342
FspBI	CTAG	6 cut(s)	59, 977, 1005, 1254, 1715, 2174
FspI	TGCGCA	1 cut(s)	671
GlaI	GCGC	3 cut(s)	282, 518, 671
GluI	GCNGC	4 cut(s)	245, 520, 1542, 2342
GsaI	CCCAGC	1 cut(s)	1481
GsuI	CTGGAG	2 cut(s)	939, 2342
HaeII	RGCGCY	1 cut(s)	284
HaeIII	GGCC	7 cut(s)	561, 1315, 1559, 2153, 2205, 2474, 2509
HapII	CCGG	8 cut(s)	135, 189, 204, 799, 913, 2240, 2506, 2561
HhaI	GCGC	3 cut(s)	283, 519, 672
Hin6I	GCGC	3 cut(s)	281, 517, 670
HinP1I	GCGC	3 cut(s)	281, 517, 670
HincII	GTYRAC	3 cut(s)	469, 511, 2280
HindII	GTYRAC	3 cut(s)	469, 511, 2280
HinfI	GANTC	8 cut(s)	131, 139, 262, 712, 949, 1064, 2129, 2163
HpaI	GTTAAC	2 cut(s)	511, 2280
HpaII	CCGG	8 cut(s)	135, 189, 204, 799, 913, 2240, 2506, 2561
HphI	GGTGA	7 cut(s)	218, 958, 1161, 1853, 2389, 2539, 2574
Hpy166II	GTNNAC	7 cut(s)	469, 511, 1322, 1371, 1605, 1695, 2280
Hpy8I	GTNNAC	7 cut(s)	469, 511, 1322, 1371, 1605, 1695, 2280
Hpy99I	CGWCG	1 cut(s)	1660
HpyCH4III	ACNGT	4 cut(s)	848, 1591, 1919, 2224
HpyCH4IV	ACGT	7 cut(s)	374, 805, 1816, 1975, 2029, 2214, 2664
HpyF10VI	GCNNNNNNNGC	4 cut(s)	107, 250, 430, 2150
HpySE526I	ACGT	7 cut(s)	374, 805, 1816, 1975, 2029, 2214, 2664
HspAI	GCGC	3 cut(s)	281, 517, 670
KflI	GGGWCCC	2 cut(s)	166, 2641
Kpn2I	TCCGGA	1 cut(s)	912
KpnI	GGTACC	1 cut(s)	1971
KspAI	GTTAAC	2 cut(s)	511, 2280
Kzo9I	GATC	6 cut(s)	790, 907, 1053, 1829, 2251, 2677
LguI	GCTCTTC	1 cut(s)	600
LmnI	GCTCC	7 cut(s)	206, 241, 779, 1933, 2323, 2533, 2564
Lsp1109I	GCAGC	3 cut(s)	231, 1553, 2328
LweI	GCATC	6 cut(s)	88, 1175, 1317, 1416, 1530, 1601
MaeI	CTAG	6 cut(s)	59, 977, 1005, 1254, 1715, 2174
MaeII	ACGT	7 cut(s)	374, 805, 1816, 1975, 2029, 2214, 2664
MaeIII	GTNAC	4 cut(s)	76, 806, 964, 1976
MalI	GATC	6 cut(s)	792, 909, 1055, 1831, 2253, 2679
MboI	GATC	6 cut(s)	790, 907, 1053, 1829, 2251, 2677
MfeI	CAATTG	1 cut(s)	181
MflI	RGATCY	3 cut(s)	1053, 1829, 2251
MhlI	GDGCHC	5 cut(s)	203, 435, 609, 2328, 2538
MlsI	TGGCCA	1 cut(s)	561
MluNI	TGGCCA	1 cut(s)	561
MlyI	GAGTC	2 cut(s)	2123, 2157
MmeI	TCCRAC	4 cut(s)	678, 2157, 2499, 2685
Mox20I	TGGCCA	1 cut(s)	561
Mph1103I	ATGCAT	2 cut(s)	103, 1332
MroI	TCCGGA	1 cut(s)	912
MroXI	GAANNNNTTC	6 cut(s)	733, 1134, 1340, 1439, 2431, 2451
MscI	TGGCCA	1 cut(s)	561
MseI	TTAA	9 cut(s)	338, 510, 524, 752, 1250, 1376, 2106, 2279, 2615
MslI	CAYNNNNRTG	1 cut(s)	2446
Msp20I	TGGCCA	1 cut(s)	561
MspA1I	CMGCKG	2 cut(s)	1544, 1802
MspCI	CTTAAG	2 cut(s)	337, 523
MspI	CCGG	8 cut(s)	135, 189, 204, 799, 913, 2240, 2506, 2561
MspR9I	CCNGG	8 cut(s)	136, 239, 663, 1723, 2009, 2241, 2249, 2562
MunI	CAATTG	1 cut(s)	181
Mva1269I	GAATGC	1 cut(s)	1006
MvaI	CCWGG	5 cut(s)	239, 663, 1723, 2009, 2249
MvnI	CGCG	2 cut(s)	519, 2373
MwoI	GCNNNNNNNGC	4 cut(s)	107, 250, 430, 2150
NciI	CCSGG	3 cut(s)	136, 2241, 2562
NdeI	CATATG	2 cut(s)	537, 1453
NdeII	GATC	6 cut(s)	790, 907, 1053, 1829, 2251, 2677
NheI	GCTAGC	1 cut(s)	1004
NmuCI	GTSAC	2 cut(s)	964, 1976
NruI	TCGCGA	1 cut(s)	2373
NsbI	TGCGCA	1 cut(s)	671
NsiI	ATGCAT	2 cut(s)	103, 1332
NspI	RCATGY	2 cut(s)	236, 1110
PaeR7I	CTCGAG	1 cut(s)	2537
PciSI	GCTCTTC	1 cut(s)	600
PctI	GAATGC	1 cut(s)	1006
PdmI	GAANNNNTTC	6 cut(s)	733, 1134, 1340, 1439, 2431, 2451
PfeI	GAWTC	6 cut(s)	131, 139, 262, 712, 949, 1064
PfoI	TCCNGGA	2 cut(s)	134, 237
PkrI	GCNGC	4 cut(s)	246, 521, 1543, 2343
PleI	GAGTC	2 cut(s)	2123, 2157
PpsI	GAGTC	2 cut(s)	2123, 2157
Ppu21I	YACGTR	4 cut(s)	806, 1976, 2030, 2215
PpuMI	RGGWCCY	3 cut(s)	166, 1481, 2641
PsiI	TTATAA	2 cut(s)	1550, 1776
Psp124BI	GAGCTC	3 cut(s)	435, 2328, 2538
Psp5II	RGGWCCY	3 cut(s)	166, 1481, 2641
Psp6I	CCWGG	5 cut(s)	237, 661, 1721, 2007, 2247
PspFI	CCCAGC	1 cut(s)	1477
PspGI	CCWGG	5 cut(s)	237, 661, 1721, 2007, 2247
PspPI	GGNCC	9 cut(s)	166, 186, 1313, 1448, 1481, 1557, 2204, 2473, 2641
PspPPI	RGGWCCY	3 cut(s)	166, 1481, 2641
PstI	CTGCAG	1 cut(s)	770
PstNI	CAGNNNCTG	2 cut(s)	244, 765
PsuI	RGATCY	3 cut(s)	1053, 1829, 2251
PvuII	CAGCTG	2 cut(s)	1544, 1802
RruI	TCGCGA	1 cut(s)	2373
RsaI	GTAC	2 cut(s)	886, 1969
RsaNI	GTAC	2 cut(s)	885, 1968
RseI	CAYNNNNRTG	1 cut(s)	2446
SacI	GAGCTC	3 cut(s)	435, 2328, 2538
SapI	GCTCTTC	1 cut(s)	600
SaqAI	TTAA	9 cut(s)	338, 510, 524, 752, 1250, 1376, 2106, 2279, 2615
SatI	GCNGC	4 cut(s)	245, 520, 1542, 2342
Sau3AI	GATC	6 cut(s)	790, 907, 1053, 1829, 2251, 2677
Sau96I	GGNCC	9 cut(s)	166, 186, 1313, 1448, 1481, 1557, 2204, 2473, 2641
SchI	GAGTC	2 cut(s)	2123, 2157
ScrFI	CCNGG	8 cut(s)	136, 239, 663, 1723, 2009, 2241, 2249, 2562
SduI	GDGCHC	5 cut(s)	203, 435, 609, 2328, 2538
SfaNI	GCATC	6 cut(s)	88, 1175, 1317, 1416, 1530, 1601
SfcI	CTRYAG	5 cut(s)	766, 1803, 1835, 2220, 2299
Sfr274I	CTCGAG	1 cut(s)	2537
SinI	GGWCC	5 cut(s)	166, 186, 1448, 1481, 2641
SlaI	CTCGAG	1 cut(s)	2537
SmiMI	CAYNNNNRTG	1 cut(s)	2446
SmlI	CTYRAG	4 cut(s)	337, 523, 970, 2537
SmoI	CTYRAG	4 cut(s)	337, 523, 970, 2537
SnaBI	TACGTA	3 cut(s)	806, 2030, 2215
SpeI	ACTAGT	1 cut(s)	1253
SsiI	CCGC	2 cut(s)	65, 519
SspMI	CTAG	6 cut(s)	59, 977, 1005, 1254, 1715, 2174
SstI	GAGCTC	3 cut(s)	435, 2328, 2538
StyD4I	CCNGG	8 cut(s)	134, 237, 661, 1721, 2007, 2239, 2247, 2560
StyI	CCWWGG	2 cut(s)	1998, 2305
TaaI	ACNGT	4 cut(s)	848, 1591, 1919, 2224
TaiI	ACGT	7 cut(s)	377, 808, 1819, 1978, 2032, 2217, 2667
TaqI	TCGA	7 cut(s)	684, 828, 1464, 1658, 1891, 2538, 2627
TaqII	GACCGA	1 cut(s)	1874
TatI	WGTACW	1 cut(s)	884
TauI	GCSGC	1 cut(s)	522
TfiI	GAWTC	6 cut(s)	131, 139, 262, 712, 949, 1064
Tru1I	TTAA	9 cut(s)	338, 510, 524, 752, 1250, 1376, 2106, 2279, 2615
Tru9I	TTAA	9 cut(s)	338, 510, 524, 752, 1250, 1376, 2106, 2279, 2615
TscAI	CASTG	6 cut(s)	117, 562, 1119, 1582, 2608, 2692
TseFI	GTSAC	2 cut(s)	964, 1976
TseI	GCWGC	3 cut(s)	244, 1541, 2341
Tsp45I	GTSAC	2 cut(s)	964, 1976
TspGWI	ACGGA	2 cut(s)	845, 1339
TspRI	CASTG	6 cut(s)	117, 562, 1119, 1582, 2608, 2692
Vha464I	CTTAAG	2 cut(s)	337, 523
VpaK11BI	GGWCC	5 cut(s)	166, 186, 1448, 1481, 2641
XapI	RAATTY	7 cut(s)	192, 564, 647, 1072, 1424, 1850, 2055
XceI	RCATGY	2 cut(s)	236, 1110
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2005
XhoI	CTCGAG	1 cut(s)	2537
XmiI	GTMKAC	1 cut(s)	1370
XmnI	GAANNNNTTC	6 cut(s)	733, 1134, 1340, 1439, 2431, 2451
XspI	CTAG	6 cut(s)	59, 977, 1005, 1254, 1715, 2174
Zsp2I	ATGCAT	2 cut(s)	103, 1332

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.