Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0002297

Physical Location & Seq

Genomic Coordinates Forward (+)

20259510 .. 20264691

Gene Structure 5182 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g17950.20

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2862 bp

ATGCTAAAGATGAGAGTTTCTGGATGTGTCGTTGCTCTCCTGTGTTCTTGCTTCGTGCTGTTTGCCGTTGCAGAAGTTACAAATCCTTCAGAAGTCAATGTACTGAGAGCAGTCAAGAGGAAATTAATTGATCCTAAGAATCATCTAAGGAATTGGGACGACGGGGATCCTTGCGAATCTTATTGGACCGGAGTTTTCTGTTTTGATGCTGTTGGGGATGATGGATACTTGCACCTCCGGGAACTCCGACTGCTGAATATGAATCTCTCAGGAACTTTAGCACCTGAGCTTGGCCAACTATCCCAACTTCAAATATTAGATTTCATGTGGAATGAATTAAGTGGAACTATACCGAATGCGATCGGAAGCATTACATCCTTGAAACTCTTGCTCTTGAATGGAAACAAACTATCTGGTTCCTTACCTCCTGAGCTCGGTTATCTTACACACTTAACTAGACTACAAGTCGATCAGAACCATATGTCAGGTCCAATTCCAAAATCATTTGCTAACATGGCCAGTTTAAAACATCTCCACTTGAACAACAACTCCTTCAGCGGTCAAATTCCGCCTGAGCTTTCTAAAGCACTCAATCTTCTTCACTTGCTTTTCGATAATAATAACTTTTCCGGACATGTACCACCAGAATTCTCCATGTTACCGAACGCGCGCATCATTCAGTTCGATAACAACAACTTCAGGGGGACTGAGATTCCAGCCTCTTACGGAAACATATCCAGATTAACAAAACTAAGTCTTAGGAATTGCAGTTTGCAGGGAGAAATTCCTGACCTTAGCAGGATAGCTAACCTTAGTTATATTGATCTAAGCCGGAATCAACTTTCTGGATCCATACCGTCACACAGACTTTCTGTCAATATAACAACAATCATTCTGTCAGACAACCGTCTTAATGGATCGATTCCTGAGAGTTTTTATGATCTTCCAGCTCTTCAGAAAGTGTCGGTCCACGACAATTTTATTACGGGTTCTGTCCCTGCTATGTGGCGGAAAATATCTTTCAGTACAAGAGCTAGACTTGCACTTGATCTTCGGAACAATTTGCTTTCACAAATATCGGAAGAGCTAAATCCTCCTGCAAATGTCACCTTGAGGCTTGAAGGAAATCCTGTCTGCAAAAATGCAAGTGTACCAAATATAGGCCAGTTCTGTCGATCTGAAGCTGGAGGAGACGGGATCTCTGAAAACTCGATAAACTCCACTCAACCAATGACCTGCTCTAGCCAAGCATGTCCAACAGACTATTTCTACGAATATGTCCCATCTTCCCCAGTTCCATGCTTTTGTGCATCACCTTTAAGAGTTACATATCGTCTAAAAAGTCCGAGTTTTTCATATTTTGCTCCTTATAAACACAATTTTGAAATCTACTTAACTGGCGCTCTCAACCTGCACCTTTATCAATTATCAATTGATTCATTTGTCTGGCAAGACGGGCCTCGTTTGCTGATGCATATGAAGTTTTTTCCTATGTTCATCAATCCACACGTGAATTTATTTAATGCAACTGAGGTTCAGCGATTGAGAGGCCGGTTTACATCATGGGATTTTCCTCCAACTGATTTCTTTGGACCGTATGAGCTTCTCAATTTCACTCTGCTGGGACCTTATTCGAACATGATTGTTGAGCAGCAAAAGACGGGCATTAGCAAGAGAGCTTTAGCAGGTGTTATAATAGGATGCATTGCTGCTGTTGTCATTATTCCTGCAGTAGTCATGCTTCTGACCAAAAGATATGTCAAACACCGTTACCCACCACCTTCACGGAGATATTCATCCTTAAAGATCTCTATGAGAATTGAAGGTGTAAAGGCGTTCACCTTCAAAGAAATGAAGGTCGCTACTGGGAATTTCGATACTTCAATGCAACTTGGACGAGGAGGCTATGGGAAAGTTTACAAAGGCATTTTGTCCGATAACACAGTTGTAGCCGTAAAGCGTGCAGAAGAAGGATCCTTACAGGGCGGAAGGGAGTTCTTGACCGAGATAGAACTGCTATCAAGGGTACATCACCGAAACCTGGTCTCTTTGGTGGGATATTGTGATGAAGAAGGGGAGCAGATGCTGGTTTACGAGTTTATGCCTAATGGTACCTTACGCGACTGGCTTTGGGTTAAAGCCAAGGGAAGCCTGGACTTCACTATGAGGTTACGTATTGCATTAGGTTCCGCTAAAGGCATCCTTTATCTCCATACGGAGGCAAATCCTCCAATATTCCACCGGGATATCAAAGCCAGCAACATACTCTTGGACTCCAACCTCGTGGCCAAAGTGGCGGATTTTGGACTCTCGCGACTTGCACCTCTGCAGGATGATGAAGGGACCGGGTCCTCTTATGTATCTACAGTCGTGAGAGGAACGGTTACGTTGATCGATCATGAATATTTCCTGACCAATAAGTTGACGGACAAAAGCGATGTCTATAGCCTAGGAATCGTGTTTCTGGAGCTCCTTACCGGCGATCAGCCAATTTCACACGGCAAAAACATAGTTCGAGAGGTGAATCTGGCTTATCAGGCAGGGCTGGTGTTCTCAATCATAGACAAAAGAATGGGATCCTATCCATCCAAATGTGTTGAGAGGTTTCTTGATTTGGCCCTCAGATGTTGCAACGAAAAGCCAGATAAACGGCCTCATATGCTGGAAGTGGTGAGGGAGATCGAAAACATACTCAAAATCATGCCGGCAACCGACACCATATTCTCGCCATCTACTACCTCGCACAGTGACCAGTCACCAACCTCGTCGTCCTTCATGACCGGAGACCGATCCTACGTGTCCTCCAGCCTGGCAGGAAGTGATCTAACCAGTGGCGTTGTCCCGACCATAACACCTCGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

954

Amino Acids

106.09

Weight (kDa)

8.3

Isoelectric Point (pI)

38.69

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002297)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G01950 AT5G01950 AT5G01950 AT5G01950 AT5G01950 AT5G01950 AT5G01950 AT5G01950
fragaria_vesca	FvH4_6g09451 FvH4_6g09451 FvH4_6g09470 FvH4_6g09470
malus_domestica	MD04G1177400.v1.1 MD12G1192800.v1.1
prunus_persica	Prupe.6G297000_v2.0.a1 Prupe.6G297000_v2.0.a1 Prupe.6G297000_v2.0.a1 Prupe.6G297100_v2.0.a1 Prupe.6G297200_v2.0.a1 Prupe.6G297400_v2.0.a1
pyrus_communis	pycom12g17950
rosa_chinensis	RchiOBHm_Chr3g0459941 RchiOBHm_Chr3g0459991 RchiOBHm_Chr3g0460021 RchiOBHm_Chr3g0460051
rosa_laevigata	RLG00000025048 RLG00000025050
rosa_multiflora	Rmu_sc0000240.1_g000049 Rmu_sc0000240.1_g000076 Rmu_sc0013658.1_g000003 Rmu_sc0030602.1_g000001
rosa_roxburghii	Rroxscaffold_6G00419890 Rroxscaffold_6G00419900
rosa_rugosa	Rorug03G0038900 Rorug03G0039100
rosa_samantha	Rh3BG100400 Rh3BG100600 Rh3CG102200 Rh3CG102400 Rh3CG102700 Rh3DG101900
rosa_wichuraiana	Rw3G008220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1371, 1694
AarI	CACCTGC	1 cut(s)	1676
Acc36I	ACCTGC	3 cut(s)	1244, 1419, 1676
Acc65I	GGTACC	1 cut(s)	2111
AccB1I	GGYRCC	1 cut(s)	2111
AccII	CGCG	4 cut(s)	668, 670, 2121, 2314
AccIII	TCCGGA	1 cut(s)	629
AciI	CCGC	6 cut(s)	558, 569, 1009, 1986, 2190, 2297
AcoI	YGGCCR	3 cut(s)	292, 516, 2286
AcsI	RAATTY	5 cut(s)	564, 647, 783, 1513, 1870
AcuI	CTGAAG	5 cut(s)	72, 538, 682, 938, 1200
AcvI	CACGTG	1 cut(s)	1510
AfaI	GTAC	6 cut(s)	102, 639, 1027, 1152, 2028, 2113
AfiI	CCNNNNNNNGG	5 cut(s)	290, 434, 1160, 2041, 2218
AflIII	ACRYGT	3 cut(s)	634, 1507, 2796
AgsI	TTSAA	9 cut(s)	311, 382, 397, 541, 1121, 1385, 1823, 1846, 1884
AhdI	GACNNNNNGTC	2 cut(s)	464, 872
AjnI	CCWGG	3 cut(s)	2040, 2151, 2808
AloI	GAACNNNNNNTCC	2 cut(s)	533, 565
Alw21I	GWGCWC	2 cut(s)	435, 2472
Alw26I	GTCTC	3 cut(s)	1185, 2050, 2778
AlwNI	CAGNNNCTG	1 cut(s)	2086
Aor13HI	TCCGGA	1 cut(s)	629
AoxI	GGCC	8 cut(s)	292, 516, 1162, 1457, 1549, 2286, 2616, 2651
ApeKI	GCWGC	2 cut(s)	1651, 1709
ApoI	RAATTY	5 cut(s)	564, 647, 783, 1513, 1870
ArsI	GACNNNNNNTTYG	4 cut(s)	1743, 1775, 2424, 2456
AseI	ATTAAT	1 cut(s)	125
Asp718I	GGTACC	1 cut(s)	2111
AspA2I	CCTAGG	1 cut(s)	2449
AspLEI	GCGC	3 cut(s)	670, 672, 1403
AspS9I	GGNCC	9 cut(s)	186, 488, 967, 1457, 1592, 1625, 2343, 2349, 2617
AsuC2I	CCSGG	3 cut(s)	239, 2243, 2347
AsuHPI	GGTGA	7 cut(s)	1099, 1305, 1831, 2024, 2533, 2683, 2748
AsuII	TTCGAA	1 cut(s)	1634
AvaII	GGWCC	7 cut(s)	186, 488, 967, 1592, 1625, 2343, 2349
AvrII	CCTAGG	1 cut(s)	2449
BalI	TGGCCA	3 cut(s)	294, 518, 2288
BamHI	GGATCC	4 cut(s)	166, 848, 1973, 2576
BanI	GGYRCC	1 cut(s)	2111
BanII	GRGCYC	2 cut(s)	435, 2472
BarI	GAAGNNNNNNTAC	6 cut(s)	84, 116, 1725, 1757, 1962, 1994
BauI	CACGAG	1 cut(s)	2282
BbrPI	CACGTG	1 cut(s)	1510
Bbv12I	GWGCWC	2 cut(s)	435, 2472
BbvI	GCAGC	2 cut(s)	1663, 1696
BccI	CCATC	4 cut(s)	215, 1291, 2593, 2737
BceAI	ACGGC	4 cut(s)	50, 1937, 2515, 2666
BciT130I	CCWGG	3 cut(s)	2042, 2153, 2810
BciVI	GTATCC	1 cut(s)	218
BcnI	CCSGG	3 cut(s)	239, 2243, 2347
BcoDI	GTCTC	3 cut(s)	1185, 2050, 2778
BfaI	CTAG	4 cut(s)	456, 1035, 1242, 2450
BfmI	CTRYAG	4 cut(s)	1728, 2327, 2364, 2443
BfoI	RGCGCY	1 cut(s)	1404
BfuAI	ACCTGC	3 cut(s)	1244, 1419, 1676
BfuI	GTATCC	1 cut(s)	218
BglI	GCCNNNNNGGC	1 cut(s)	2294
BglII	AGATCT	1 cut(s)	1806
BisI	GCNGC	2 cut(s)	1652, 1710
BlnI	CCTAGG	1 cut(s)	2449
BlsI	GCNGC	2 cut(s)	1653, 1711
Bme1390I	CCNGG	6 cut(s)	239, 2042, 2153, 2243, 2347, 2810
Bme18I	GGWCC	7 cut(s)	186, 488, 967, 1592, 1625, 2343, 2349
BmeRI	GACNNNNNGTC	2 cut(s)	464, 872
BmgT120I	GGNCC	9 cut(s)	186, 488, 967, 1457, 1592, 1625, 2343, 2349, 2617
BmrFI	CCNGG	6 cut(s)	239, 2042, 2153, 2243, 2347, 2810
BmrI	ACTGGG	2 cut(s)	1286, 1875
BmsI	GCATC	7 cut(s)	196, 681, 1319, 1461, 1691, 2073, 2208
BmuI	ACTGGG	2 cut(s)	1286, 1875
BoxI	GACNNNNGTC	1 cut(s)	906
BpmI	CTGGAG	3 cut(s)	1206, 2486, 2788
Bpu10I	CCTNAGC	4 cut(s)	285, 429, 573, 794
Bpu14I	TTCGAA	1 cut(s)	1634
BpuEI	CTTGAG	1 cut(s)	1132
BpuMI	CCSGG	3 cut(s)	239, 2243, 2347
Bsa29I	ATCGAT	2 cut(s)	920, 2394
BsaAI	YACGTR	3 cut(s)	1510, 2174, 2797
BsaBI	GATNNNNATC	1 cut(s)	1795
BsaI	GGTCTC	2 cut(s)	2050, 2778
BsaJI	CCNNGG	2 cut(s)	2142, 2449
BsaWI	WCCGGW	3 cut(s)	188, 629, 2780
BsaXI	ACNNNNNCTCC	4 cut(s)	533, 563, 2786, 2816
Bsc4I	CCNNNNNNNGG	5 cut(s)	290, 434, 1160, 2041, 2218
Bse118I	RCCGGY	3 cut(s)	1551, 2477, 2704
Bse1I	ACTGG	8 cut(s)	519, 1165, 1292, 1402, 1870, 2129, 2752, 2829
Bse3DI	GCAATG	1 cut(s)	1704
Bse8I	GATNNNNATC	1 cut(s)	1795
BseAI	TCCGGA	1 cut(s)	629
BseBI	CCWGG	3 cut(s)	2042, 2153, 2810
BseCI	ATCGAT	2 cut(s)	920, 2394
BseDI	CCNNGG	2 cut(s)	2142, 2449
BseGI	GGATG	8 cut(s)	29, 223, 374, 1706, 1796, 2199, 2338, 2585
BseJI	GATNNNNATC	1 cut(s)	1795
BseLI	CCNNNNNNNGG	5 cut(s)	290, 434, 1160, 2041, 2218
BseMI	GCAATG	1 cut(s)	1704
BseMII	CTCAG	9 cut(s)	95, 276, 282, 420, 564, 699, 918, 1521, 2635
BseNI	ACTGG	8 cut(s)	519, 1165, 1292, 1402, 1870, 2129, 2752, 2829
BsePI	GCGCGC	1 cut(s)	668
BseRI	GAGGAG	2 cut(s)	1203, 1914
BseXI	GCAGC	2 cut(s)	1663, 1696
BseYI	CCCAGC	1 cut(s)	1621
BsgI	GTGCAG	2 cut(s)	1397, 1983
Bsh1236I	CGCG	4 cut(s)	668, 670, 2121, 2314
Bsh1285I	CGRYCG	1 cut(s)	363
BshFI	GGCC	8 cut(s)	294, 518, 1164, 1459, 1551, 2288, 2618, 2653
BshNI	GGYRCC	1 cut(s)	2111
BshVI	ATCGAT	2 cut(s)	920, 2394
BsiEI	CGRYCG	1 cut(s)	363
BsiHKAI	GWGCWC	2 cut(s)	435, 2472
BslFI	GGGAC	7 cut(s)	170, 718, 980, 1265, 1638, 2356, 2825
BslI	CCNNNNNNNGG	5 cut(s)	290, 434, 1160, 2041, 2218
BsmAI	GTCTC	3 cut(s)	1185, 2050, 2778
BsmBI	CGTCTC	1 cut(s)	1185
BsmFI	GGGAC	7 cut(s)	170, 718, 980, 1265, 1638, 2356, 2825
BsmI	GAATGC	1 cut(s)	361
BsnI	GGCC	8 cut(s)	294, 518, 1164, 1459, 1551, 2288, 2618, 2653
Bso31I	GGTCTC	2 cut(s)	2050, 2778
Bsp119I	TTCGAA	1 cut(s)	1634
Bsp1286I	GDGCHC	2 cut(s)	435, 2472
Bsp13I	TCCGGA	1 cut(s)	629
Bsp68I	TCGCGA	1 cut(s)	2314
BspACI	CCGC	6 cut(s)	558, 569, 1009, 1986, 2190, 2297
BspANI	GGCC	8 cut(s)	294, 518, 1164, 1459, 1551, 2288, 2618, 2653
BspCNI	CTCAG	9 cut(s)	96, 277, 281, 421, 565, 700, 919, 1522, 2634
BspDI	ATCGAT	2 cut(s)	920, 2394
BspEI	TCCGGA	1 cut(s)	629
BspFNI	CGCG	4 cut(s)	668, 670, 2121, 2314
BspHI	TCATGA	2 cut(s)	2398, 2775
BspMAI	CTGCAG	2 cut(s)	1732, 2331
BspMI	ACCTGC	3 cut(s)	1244, 1419, 1676
BspQI	GCTCTTC	2 cut(s)	957, 1077
BspT104I	TTCGAA	1 cut(s)	1634
BspT107I	GGYRCC	1 cut(s)	2111
BspTNI	GGTCTC	2 cut(s)	2050, 2778
BsrDI	GCAATG	1 cut(s)	1704
BsrFI	RCCGGY	3 cut(s)	1551, 2477, 2704
BsrI	ACTGG	8 cut(s)	519, 1165, 1292, 1402, 1870, 2129, 2752, 2829
BssAI	RCCGGY	3 cut(s)	1551, 2477, 2704
BssECI	CCNNGG	2 cut(s)	2142, 2449
BssHII	GCGCGC	1 cut(s)	668
BssSI	CACGAG	1 cut(s)	2282
BssT1I	CCWWGG	2 cut(s)	2142, 2449
Bst2BI	CACGAG	1 cut(s)	2282
Bst2UI	CCWGG	3 cut(s)	2042, 2153, 2810
Bst4CI	ACNGT	8 cut(s)	858, 908, 1596, 1769, 1945, 2368, 2383, 2747
Bst6I	CTCTTC	2 cut(s)	957, 1077
BstBAI	YACGTR	3 cut(s)	1510, 2174, 2797
BstBI	TTCGAA	1 cut(s)	1634
BstC8I	GCNNGC	4 cut(s)	670, 1962, 2257, 2706
BstF5I	GGATG	8 cut(s)	29, 223, 374, 1706, 1796, 2199, 2338, 2585
BstFNI	CGCG	4 cut(s)	668, 670, 2121, 2314
BstH2I	RGCGCY	1 cut(s)	1404
BstHHI	GCGC	3 cut(s)	670, 672, 1403
BstMAI	GTCTC	3 cut(s)	1185, 2050, 2778
BstMCI	CGRYCG	1 cut(s)	363
BstMWI	GCNNNNNNNGC	7 cut(s)	515, 1040, 1456, 1465, 2294, 2537, 2659
BstNI	CCWGG	3 cut(s)	2042, 2153, 2810
BstNSI	RCATGY	2 cut(s)	638, 1254
BstPAI	GACNNNNGTC	1 cut(s)	906
BstSCI	CCNGG	6 cut(s)	237, 2040, 2151, 2241, 2345, 2808
BstSFI	CTRYAG	4 cut(s)	1728, 2327, 2364, 2443
BstSNI	TACGTA	1 cut(s)	2174
BstUI	CGCG	4 cut(s)	668, 670, 2121, 2314
BstV1I	GCAGC	2 cut(s)	1663, 1696
BstX2I	RGATCY	6 cut(s)	166, 848, 1197, 1806, 1973, 2576
BstXI	CCANNNNNNTGG	1 cut(s)	2284
BstYI	RGATCY	6 cut(s)	166, 848, 1197, 1806, 1973, 2576
Bsu15I	ATCGAT	2 cut(s)	920, 2394
BsuI	GTATCC	1 cut(s)	218
BsuRI	GGCC	8 cut(s)	294, 518, 1164, 1459, 1551, 2288, 2618, 2653
BsuTUI	ATCGAT	2 cut(s)	920, 2394
BtgZI	GCGATG	1 cut(s)	2451
BtsCI	GGATG	8 cut(s)	29, 223, 374, 1706, 1796, 2199, 2338, 2585
BtsIMutI	CAGTG	2 cut(s)	2752, 2836
BtuMI	TCGCGA	1 cut(s)	2314
BveI	ACCTGC	3 cut(s)	1244, 1419, 1676
Cac8I	GCNNGC	4 cut(s)	670, 1962, 2257, 2706
CaiI	CAGNNNCTG	1 cut(s)	2086
CciI	TCATGA	2 cut(s)	2398, 2775
CfoI	GCGC	3 cut(s)	670, 672, 1403
Cfr10I	RCCGGY	3 cut(s)	1551, 2477, 2704
Cfr13I	GGNCC	9 cut(s)	186, 488, 967, 1457, 1592, 1625, 2343, 2349, 2617
ClaI	ATCGAT	2 cut(s)	920, 2394
CsiI	ACCWGGT	1 cut(s)	2040
Csp6I	GTAC	6 cut(s)	101, 638, 1026, 1151, 2027, 2112
CviQI	GTAC	6 cut(s)	101, 638, 1026, 1151, 2027, 2112
DraI	TTTAAA	1 cut(s)	525
DriI	GACNNNNNGTC	2 cut(s)	464, 872
EaeI	YGGCCR	3 cut(s)	292, 516, 2286
Eam1104I	CTCTTC	2 cut(s)	957, 1077
Eam1105I	GACNNNNNGTC	2 cut(s)	464, 872
EarI	CTCTTC	2 cut(s)	957, 1077
EciI	GGCGGA	4 cut(s)	558, 1024, 2001, 2312
Ecl136II	GAGCTC	2 cut(s)	433, 2470
Eco105I	TACGTA	1 cut(s)	2174
Eco130I	CCWWGG	2 cut(s)	2142, 2449
Eco24I	GRGCYC	2 cut(s)	435, 2472
Eco31I	GGTCTC	2 cut(s)	2050, 2778
Eco32I	GATATC	1 cut(s)	2248
Eco47I	GGWCC	7 cut(s)	186, 488, 967, 1592, 1625, 2343, 2349
Eco53kI	GAGCTC	2 cut(s)	433, 2470
Eco57I	CTGAAG	5 cut(s)	72, 538, 682, 938, 1200
Eco72I	CACGTG	1 cut(s)	1510
EcoICRI	GAGCTC	2 cut(s)	433, 2470
EcoO109I	RGGNCCY	2 cut(s)	1625, 2349
EcoRI	GAATTC	1 cut(s)	647
EcoRII	CCWGG	3 cut(s)	2040, 2151, 2808
EcoRV	GATATC	1 cut(s)	2248
EcoT14I	CCWWGG	2 cut(s)	2142, 2449
EcoT22I	ATGCAT	2 cut(s)	1476, 1706
EcoT38I	GRGCYC	2 cut(s)	435, 2472
ErhI	CCWWGG	2 cut(s)	2142, 2449
Esp3I	CGTCTC	1 cut(s)	1185
FalI	AAGNNNNNCTT	2 cut(s)	2187, 2219
FaqI	GGGAC	7 cut(s)	170, 718, 980, 1265, 1638, 2356, 2825
FauNDI	CATATG	3 cut(s)	480, 1476, 2658
Fnu4HI	GCNGC	2 cut(s)	1652, 1710
FokI	GGATG	8 cut(s)	36, 230, 361, 1713, 1783, 2186, 2345, 2572
FriOI	GRGCYC	2 cut(s)	435, 2472
Fsp4HI	GCNGC	2 cut(s)	1652, 1710
FspBI	CTAG	4 cut(s)	456, 1035, 1242, 2450
GlaI	GCGC	3 cut(s)	669, 671, 1402
GluI	GCNGC	2 cut(s)	1652, 1710
GsaI	CCCAGC	1 cut(s)	1625
GsuI	CTGGAG	3 cut(s)	1206, 2486, 2788
HaeII	RGCGCY	1 cut(s)	1404
HaeIII	GGCC	8 cut(s)	294, 518, 1164, 1459, 1551, 2288, 2618, 2653
HhaI	GCGC	3 cut(s)	670, 672, 1403
Hin6I	GCGC	3 cut(s)	668, 670, 1401
HinP1I	GCGC	3 cut(s)	668, 670, 1401
HincII	GTYRAC	1 cut(s)	2424
HindII	GTYRAC	1 cut(s)	2424
HphI	GGTGA	7 cut(s)	1099, 1305, 1831, 2024, 2533, 2683, 2748
Hpy166II	GTNNAC	7 cut(s)	970, 1151, 1557, 1839, 1918, 2092, 2424
Hpy8I	GTNNAC	7 cut(s)	970, 1151, 1557, 1839, 1918, 2092, 2424
Hpy99I	CGWCG	2 cut(s)	164, 2770
HpyCH4III	ACNGT	8 cut(s)	858, 908, 1596, 1769, 1945, 2368, 2383, 2747
HpyCH4IV	ACGT	4 cut(s)	1509, 2173, 2387, 2796
HpyF10VI	GCNNNNNNNGC	7 cut(s)	515, 1040, 1456, 1465, 2294, 2537, 2659
HpySE526I	ACGT	4 cut(s)	1509, 2173, 2387, 2796
HspAI	GCGC	3 cut(s)	668, 670, 1401
Kpn2I	TCCGGA	1 cut(s)	629
KpnI	GGTACC	1 cut(s)	2115
KroI	GCCGGC	1 cut(s)	2704
KroNI	GCCGGC	1 cut(s)	2706
LguI	GCTCTTC	2 cut(s)	957, 1077
LmnI	GCTCC	4 cut(s)	1369, 2077, 2467, 2475
Lsp1109I	GCAGC	2 cut(s)	1663, 1696
LweI	GCATC	7 cut(s)	196, 681, 1319, 1461, 1691, 2073, 2208
MabI	ACCWGGT	1 cut(s)	2040
MaeI	CTAG	4 cut(s)	456, 1035, 1242, 2450
MaeII	ACGT	4 cut(s)	1509, 2173, 2387, 2796
MboII	GAAGA	9 cut(s)	587, 590, 935, 944, 1043, 1094, 1278, 1979, 2081
MfeI	CAATTG	1 cut(s)	1431
MflI	RGATCY	6 cut(s)	166, 848, 1197, 1806, 1973, 2576
MhlI	GDGCHC	2 cut(s)	435, 2472
MlsI	TGGCCA	3 cut(s)	294, 518, 2288
MluNI	TGGCCA	3 cut(s)	294, 518, 2288
MlyI	GAGTC	2 cut(s)	2267, 2301
MmeI	TCCRAC	4 cut(s)	271, 1280, 1601, 2301
Mox20I	TGGCCA	3 cut(s)	294, 518, 2288
Mph1103I	ATGCAT	2 cut(s)	1476, 1706
MroI	TCCGGA	1 cut(s)	629
MroNI	GCCGGC	1 cut(s)	2704
MscI	TGGCCA	3 cut(s)	294, 518, 2288
MslI	CAYNNNNRTG	2 cut(s)	2590, 2857
Msp20I	TGGCCA	3 cut(s)	294, 518, 2288
MspA1I	CMGCKG	1 cut(s)	558
MspR9I	CCNGG	6 cut(s)	239, 2042, 2153, 2243, 2347, 2810
MunI	CAATTG	1 cut(s)	1431
Mva1269I	GAATGC	1 cut(s)	361
MvaI	CCWGG	3 cut(s)	2042, 2153, 2810
MvnI	CGCG	4 cut(s)	668, 670, 2121, 2314
MwoI	GCNNNNNNNGC	7 cut(s)	515, 1040, 1456, 1465, 2294, 2537, 2659
NaeI	GCCGGC	1 cut(s)	2706
NciI	CCSGG	3 cut(s)	239, 2243, 2347
NdeI	CATATG	3 cut(s)	480, 1476, 2658
NgoMIV	GCCGGC	1 cut(s)	2704
NmuCI	GTSAC	4 cut(s)	858, 1105, 2747, 2754
NruI	TCGCGA	1 cut(s)	2314
NsiI	ATGCAT	2 cut(s)	1476, 1706
NspI	RCATGY	2 cut(s)	638, 1254
NspV	TTCGAA	1 cut(s)	1634
PagI	TCATGA	2 cut(s)	2398, 2775
PaqCI	CACCTGC	1 cut(s)	1676
PauI	GCGCGC	1 cut(s)	668
PciI	ACATGT	1 cut(s)	634
PciSI	GCTCTTC	2 cut(s)	957, 1077
PctI	GAATGC	1 cut(s)	361
PdiI	GCCGGC	1 cut(s)	2706
PfeI	GAWTC	9 cut(s)	139, 176, 262, 712, 835, 922, 1436, 2454, 2524
PflFI	GACNNNGTC	1 cut(s)	2347
PfoI	TCCNGGA	1 cut(s)	237
PkrI	GCNGC	2 cut(s)	1653, 1711
Ple19I	CGATCG	1 cut(s)	363
PleI	GAGTC	2 cut(s)	2267, 2301
PmaCI	CACGTG	1 cut(s)	1510
PmlI	CACGTG	1 cut(s)	1510
PpsI	GAGTC	2 cut(s)	2267, 2301
Ppu21I	YACGTR	3 cut(s)	1510, 2174, 2797
PpuMI	RGGWCCY	2 cut(s)	1625, 2349
PscI	ACATGT	1 cut(s)	634
PshAI	GACNNNNGTC	1 cut(s)	906
PshBI	ATTAAT	1 cut(s)	125
PsiI	TTATAA	2 cut(s)	1371, 1694
Psp124BI	GAGCTC	2 cut(s)	435, 2472
Psp5II	RGGWCCY	2 cut(s)	1625, 2349
Psp6I	CCWGG	3 cut(s)	2040, 2151, 2808
PspCI	CACGTG	1 cut(s)	1510
PspFI	CCCAGC	1 cut(s)	1621
PspGI	CCWGG	3 cut(s)	2040, 2151, 2808
PspPI	GGNCC	9 cut(s)	186, 488, 967, 1457, 1592, 1625, 2343, 2349, 2617
PspPPI	RGGWCCY	2 cut(s)	1625, 2349
PstI	CTGCAG	2 cut(s)	1732, 2331
PstNI	CAGNNNCTG	1 cut(s)	2086
PsuI	RGATCY	6 cut(s)	166, 848, 1197, 1806, 1973, 2576
PsyI	GACNNNGTC	1 cut(s)	2347
PteI	GCGCGC	1 cut(s)	668
PvuI	CGATCG	1 cut(s)	363
RruI	TCGCGA	1 cut(s)	2314
RsaI	GTAC	6 cut(s)	102, 639, 1027, 1152, 2028, 2113
RsaNI	GTAC	6 cut(s)	101, 638, 1026, 1151, 2027, 2112
RseI	CAYNNNNRTG	2 cut(s)	2590, 2857
SacI	GAGCTC	2 cut(s)	435, 2472
SapI	GCTCTTC	2 cut(s)	957, 1077
SatI	GCNGC	2 cut(s)	1652, 1710
Sau96I	GGNCC	9 cut(s)	186, 488, 967, 1457, 1592, 1625, 2343, 2349, 2617
SchI	GAGTC	2 cut(s)	2267, 2301
ScrFI	CCNGG	6 cut(s)	239, 2042, 2153, 2243, 2347, 2810
SduI	GDGCHC	2 cut(s)	435, 2472
SexAI	ACCWGGT	1 cut(s)	2040
SfaNI	GCATC	7 cut(s)	196, 681, 1319, 1461, 1691, 2073, 2208
SfcI	CTRYAG	4 cut(s)	1728, 2327, 2364, 2443
SfuI	TTCGAA	1 cut(s)	1634
SinI	GGWCC	7 cut(s)	186, 488, 967, 1592, 1625, 2343, 2349
SmiMI	CAYNNNNRTG	2 cut(s)	2590, 2857
SmlI	CTYRAG	1 cut(s)	1111
SmoI	CTYRAG	1 cut(s)	1111
SnaBI	TACGTA	1 cut(s)	2174
SsiI	CCGC	6 cut(s)	558, 569, 1009, 1986, 2190, 2297
SspI	AATATT	3 cut(s)	315, 2235, 2405
SspMI	CTAG	4 cut(s)	456, 1035, 1242, 2450
SstI	GAGCTC	2 cut(s)	435, 2472
StyD4I	CCNGG	6 cut(s)	237, 2040, 2151, 2241, 2345, 2808
StyI	CCWWGG	2 cut(s)	2142, 2449
TaaI	ACNGT	8 cut(s)	858, 908, 1596, 1769, 1945, 2368, 2383, 2747
TaiI	ACGT	4 cut(s)	1512, 2176, 2390, 2799
TaqII	GACCGA	3 cut(s)	955, 2018, 2802
TatI	WGTACW	2 cut(s)	100, 1025
TfiI	GAWTC	9 cut(s)	139, 176, 262, 712, 835, 922, 1436, 2454, 2524
TscAI	CASTG	2 cut(s)	2752, 2836
TseFI	GTSAC	4 cut(s)	858, 1105, 2747, 2754
TseI	GCWGC	2 cut(s)	1651, 1709
Tsp45I	GTSAC	4 cut(s)	858, 1105, 2747, 2754
TspGWI	ACGGA	4 cut(s)	741, 1801, 2231, 2441
TspRI	CASTG	2 cut(s)	2752, 2836
Tth111I	GACNNNGTC	1 cut(s)	2347
VpaK11BI	GGWCC	7 cut(s)	186, 488, 967, 1592, 1625, 2343, 2349
VspI	ATTAAT	1 cut(s)	125
XapI	RAATTY	5 cut(s)	564, 647, 783, 1513, 1870
XceI	RCATGY	2 cut(s)	638, 1254
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2149
XmaJI	CCTAGG	1 cut(s)	2449
XspI	CTAG	4 cut(s)	456, 1035, 1242, 2450
Zsp2I	ATGCAT	2 cut(s)	1476, 1706

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.