Rh3CG102700
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
OG0002297
Physical Location & Seq
Reverse (-)
8166355 .. 8173055
6701 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG102700.1

Sequence Viewer

Length: 2724 bp
ATGTTGAGACTGAGATTTTGGGGTTGCCTCATTGGTCTGGCTTGTTCTTGCTTCTTCCTAGTTGCGGTTGCACAAGTTACTAATCCTTCTGAAGTGGATGCATTGAGAGCAGTGAAGGGTAGTCTGATTGATTCCGGGAAGCATTTGAGGAATTGGGACAAAGGGGATCCATGTAAAGCGAATTGGACCGGAGTTTTGTGTTTCGGTGATGTTGGGACTGATGGATACTTGCATGTCCGGGAGCTGCAACTGCTGAGTATGAATCTCTCAGGAACTTTAGCGCCTGAGCTTGGCAAACTATCTCAACTTCTGATATTAGATTTCATGTGGAATGACTTGAGTGGGACTATACCGAAGGAGATAGGAAACATTACGTCCTTGAAACTCTTGCTCTTGAATGGAAACAAACTATCGGGTTCCTTGCCTGATGAGCTCGGTTATCTTGAAAATCTAAATAGACTACAAGTTGACCAGAACCATCTTTCAGGTTCAATACCAAAATCATTTGTTCACTTGCGCAGCGTAAGACACCTCCATATGAACAACAACTCCTTCAGCGGCCAAATTCCATCTGAGATTTCTGAAATACCCGCTCTTCTTCATGTGCTCTTGGATAATAATAAATTATCTGGATATCTTCCACCAGAATTCTCCAACATACCAGGGTTGCGCATACTTCAACTCGATAACAACAACTTCACGGGAACTGAGATTCCAGTTACTTATGGGAACCTTTCCAGATTGGCAAAGTTAAGTCTCAGGAACTGCAGTCTGCAGGGAGCAATTCCTGATCTTAGCCGGATACCTAACCTCAGTTATCTAGATCTAAGCTGGAATCATCTTGCTGGACCAATACCATCACATGGACTTTCTGACAATATGACAACAATTGATCTGTCAGATAATCATCTTAACGGATCTATTCCTGAAGGTTTCTCTCATTTTCCTCATCTTCAGAAATTGTCGCTCAAAAATAATCAGTTGAACGGTTCTGTCCCTGCTATATGGAGGAACATTTCCTTTAGTACAAGAGCTAGACTTTCATTTGATCTCCGGAACAATTCACTCTCTAACATATTGGGAGAGCTGAATCCTCCAGCAAATGTCACCTTGAGGCTAGAAGGAAATCCTATTTGCAAGAATGCTAGCATAGAAAATATAAGCCCGTTCTGTCAATCTGAAGCGAGAGATGGGATCCCCGAAGATTCAATAAATTCAACTCAACAGATGACCTGCCCTATTCAAGCATGTCCAGTGGATGATTTCTATGAATATGTTCCATCTTCCCCTGTGCCATGCTTTTGTGCATCACCTATTATAGTTGAATATCGTCTGAAAAGCCCGAGCTTTTCTTACTTTCTTCCATATATACAGCAGTTTGAAGAGTATTTAACTAGTTCTCTAAAATTGGAGATTTACCAGTTAACAATTAGTTCCTTTGTCTGGGAAAAAGGGCCTCGTTTACGGATGCATTTGAAGTTCTTCCCTGTGTATGGTGCTTCACACTCGCATACATTAAATGCAAGTGAGGTTCTGCGAATTAGAGGCATCTTTACATCATGGGAATTTCCTCAGAATGATTTCTTTGGACCATATGAACTACTCGACTTCAAACTGCTGGGACCTTATTCAAATATGATTGTCAAGAGACAAAAGATGGGCATCAGTAAGGGTGTATTAGCAGCTGTTATAATAGGGGCCATTGCTTCTGTTGTCAGTATATCTGCAACAGTCATGCTTCTGTTCACAAGATGCACCCGAAACCGACACACACCACCTTCAAGGAGACACTCATCGTCGAAGATTTCTATGAGAATTGAAGGTGTAAAGGCGTTCACTTTCAAAGAAATGACACTAGCCACCAGGAACTTTGATAGTGCAACTCAACTTGGACGAGGAGGCTATGGGAAAGTTTATAAAGGTATCTTATCTGATAACACAGCTGTAGCCATAAAACGTGCAGAAGAAGGATCCCTACAGGGTGAAAAAGAATTCTTGACCGAGATAGAATTGTTATCAAGGCTACACCATCGAAACTTAGTCTCTTTGGTAGGATACTGTGAAGAAGAAGGGGAGCAGATGTTGGTTTATGAGTTCATGCCTAATGGTACCTTACGTGACTGGCTTTCTGATAAAACCAAGGGAAGCCTGGACTTCAGTATGAGATTACGTATTGCATTGGGTTCAGCCAAAGGAATTCTTTATCTCCATACCGAGGCAAATCCTCCTATATTCCACAGAGATATTAAAGCCACAAATATACTTTTGGACTCCAACTATATCGCTAAGGTGGCCGATTTTGGACTCTCACGACTAGCACCTGTCCAGAATGATGAAGGGACTGGCCCTGCATACGTATCTACAGTCGTGAGAGGAACACCGGTGAATATGGCTCATCAGTCAGGCTTGATGTTCTCCATTATAGATAGCAGAATGGGTTCGTATCCATCTGAATGTGTTCAGAGGTTTGTAGCTTTGGCCCTCAGATGTTGCCATGATAAACAAGACGACCGGCCATCAATGTTGGATGTGGTGAGGGAGCTCGAGAACATAATCAAACTCATGCCGGGAGCTGAAACAATGTTTACACCATCTGGTTCCTCATACACTGAAAAATCATTAACTTCATCATCGACTTTTACTGGGGACCTATATACGTCCTCCTCCAACGTGGAAGGAAGTGATCTAACCAGTGGTGTAATCCCTACCATCTCGCCTCGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

907

Amino Acids

100.52

Weight (kDa)

6.91

Isoelectric Point (pI)

40.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 29 - 67 4.2e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 78 - 194 7.5e-08 Leucine-rich repeat region
LRR_14 PF23598 171 - 353 2.8e-06 Leucine-rich repeat region
Pkinase PF00069 626 - 790 1.3e-30 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 628 - 773 2.6e-34 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1691, 1917
Acc16I TGCGCA 2 cut(s) 518, 671
Acc36I ACCTGC 1 cut(s) 1241
Acc65I GGTACC 1 cut(s) 2108
AccB1I GGYRCC 1 cut(s) 2108
AccB7I CCANNNNNTGG 1 cut(s) 863
AccBSI CCGCTC 1 cut(s) 593
AccIII TCCGGA 1 cut(s) 1053
AciI CCGC 3 cut(s) 65, 558, 591
AclWI GGATC 7 cut(s) 161, 174, 925, 1189, 1202, 1965, 1978
AcoI YGGCCR 3 cut(s) 559, 2292, 2513
AcsI RAATTY 6 cut(s) 564, 647, 1213, 1565, 1991, 2196
AcuI CTGAAG 6 cut(s) 111, 538, 938, 948, 1200, 2140
AfaI GTAC 2 cut(s) 1027, 2110
AfiI CCNNNNNNNGG 6 cut(s) 64, 290, 863, 1443, 1493, 2215
AgeI ACCGGT 1 cut(s) 2380
AhlI ACTAGT 1 cut(s) 1394
AjnI CCWGG 3 cut(s) 661, 1862, 2148
AloI GAACNNNNNNTCC 4 cut(s) 533, 565, 697, 729
Alw21I GWGCWC 3 cut(s) 435, 609, 2544
Alw26I GTCTC 4 cut(s) 761, 1642, 1780, 2047
AlwI GGATC 7 cut(s) 161, 174, 925, 1189, 1202, 1965, 1978
AlwNI CAGNNNCTG 1 cut(s) 765
Ama87I CYCGRG 2 cut(s) 1342, 2543
Aor13HI TCCGGA 1 cut(s) 1053
AoxI GGCC 7 cut(s) 559, 1454, 1698, 2292, 2344, 2478, 2513
ApeKI GCWGC 3 cut(s) 244, 519, 1682
ApoI RAATTY 6 cut(s) 564, 647, 1213, 1565, 1991, 2196
ArsI GACNNNNNNTTYG 3 cut(s) 32, 178, 210
AsiGI ACCGGT 1 cut(s) 2380
Asp700I GAANNNNTTC 5 cut(s) 1275, 1481, 1580, 2437, 2457
Asp718I GGTACC 1 cut(s) 2108
AspLEI GCGC 3 cut(s) 283, 519, 672
AspS9I GGNCC 9 cut(s) 186, 848, 1454, 1589, 1622, 1698, 2345, 2479, 2647
AsuC2I CCSGG 3 cut(s) 136, 239, 2568
AsuHPI GGTGA 6 cut(s) 218, 1099, 1302, 1994, 2395, 2545
AsuNHI GCTAGC 1 cut(s) 1145
AvaI CYCGRG 2 cut(s) 1342, 2543
AvaII GGWCC 5 cut(s) 186, 848, 1589, 1622, 2647
BamHI GGATCC 3 cut(s) 166, 1194, 1970
BanI GGYRCC 1 cut(s) 2108
BanII GRGCYC 2 cut(s) 435, 2544
BarI GAAGNNNNNNTAC 2 cut(s) 1959, 1991
Bbv12I GWGCWC 3 cut(s) 435, 609, 2544
BbvI GCAGC 3 cut(s) 231, 531, 1694
BciT130I CCWGG 3 cut(s) 663, 1864, 2150
BciVI GTATCC 4 cut(s) 218, 795, 2048, 2454
BcnI CCSGG 3 cut(s) 136, 239, 2568
BcoDI GTCTC 4 cut(s) 761, 1642, 1780, 2047
BcuI ACTAGT 1 cut(s) 1394
BfaI CTAG 8 cut(s) 59, 821, 1035, 1118, 1146, 1395, 1856, 2315
BfmI CTRYAG 5 cut(s) 766, 773, 1944, 1976, 2361
BfoI RGCGCY 1 cut(s) 284
BfuAI ACCTGC 1 cut(s) 1241
BfuI GTATCC 4 cut(s) 218, 795, 2048, 2454
BglII AGATCT 1 cut(s) 823
BisI GCNGC 4 cut(s) 245, 520, 559, 1683
BlsI GCNGC 4 cut(s) 246, 521, 560, 1684
Bme1390I CCNGG 6 cut(s) 136, 239, 663, 1864, 2150, 2568
Bme18I GGWCC 5 cut(s) 186, 848, 1589, 1622, 2647
BmeT110I CYCGRG 2 cut(s) 1342, 2543
BmgT120I GGNCC 9 cut(s) 186, 848, 1454, 1589, 1622, 1698, 2345, 2479, 2647
BmrFI CCNGG 6 cut(s) 136, 239, 663, 1864, 2150, 2568
BmrI ACTGGG 1 cut(s) 2652
BmsI GCATC 6 cut(s) 88, 1316, 1458, 1557, 1671, 1742
BmtI GCTAGC 1 cut(s) 1149
BmuI ACTGGG 1 cut(s) 2652
BpmI CTGGAG 1 cut(s) 1080
Bpu10I CCTNAGC 2 cut(s) 285, 2286
BpuEI CTTGAG 2 cut(s) 358, 1132
BpuMI CCSGG 3 cut(s) 136, 239, 2568
BsaAI YACGTR 3 cut(s) 2117, 2171, 2356
BsaBI GATNNNNATC 2 cut(s) 906, 1661
BsaJI CCNNGG 3 cut(s) 662, 2139, 2214
BsaWI WCCGGW 3 cut(s) 188, 1053, 2380
BsaXI ACNNNNNCTCC 4 cut(s) 533, 563, 2066, 2096
Bsc4I CCNNNNNNNGG 6 cut(s) 64, 290, 863, 1443, 1493, 2215
Bse118I RCCGGY 2 cut(s) 2380, 2511
Bse1I ACTGG 7 cut(s) 716, 1253, 1420, 2126, 2347, 2647, 2691
Bse3DI GCAATG 1 cut(s) 1701
Bse8I GATNNNNATC 2 cut(s) 906, 1661
BseAI TCCGGA 1 cut(s) 1053
BseBI CCWGG 3 cut(s) 663, 1864, 2150
BseDI CCNNGG 3 cut(s) 662, 2139, 2214
BseGI GGATG 4 cut(s) 103, 1264, 1473, 2533
BseJI GATNNNNATC 2 cut(s) 906, 1661
BseLI CCNNNNNNNGG 6 cut(s) 64, 290, 863, 1443, 1493, 2215
BseMI GCAATG 1 cut(s) 1701
BseMII CTCAG 9 cut(s) 245, 276, 282, 564, 699, 772, 826, 1586, 2497
BseNI ACTGG 7 cut(s) 716, 1253, 1420, 2126, 2347, 2647, 2691
BseRI GAGGAG 2 cut(s) 1911, 2653
BseXI GCAGC 3 cut(s) 231, 531, 1694
BseYI CCCAGC 1 cut(s) 1618
BsgI GTGCAG 1 cut(s) 1980
Bsh1285I CGRYCG 1 cut(s) 2512
BshFI GGCC 7 cut(s) 561, 1456, 1700, 2294, 2346, 2480, 2515
BshNI GGYRCC 1 cut(s) 2108
BshTI ACCGGT 1 cut(s) 2380
BsiEI CGRYCG 1 cut(s) 2512
BsiHKAI GWGCWC 3 cut(s) 435, 609, 2544
BsiHKCI CYCGRG 2 cut(s) 1342, 2543
BsiSI CCGG 8 cut(s) 135, 189, 238, 799, 1054, 2381, 2512, 2567
BslFI GGGAC 7 cut(s) 170, 229, 358, 980, 1635, 2353, 2660
BslI CCNNNNNNNGG 6 cut(s) 64, 290, 863, 1443, 1493, 2215
BsmAI GTCTC 4 cut(s) 761, 1642, 1780, 2047
BsmFI GGGAC 7 cut(s) 170, 229, 358, 980, 1635, 2353, 2660
BsmI GAATGC 1 cut(s) 1147
BsnI GGCC 7 cut(s) 561, 1456, 1700, 2294, 2346, 2480, 2515
BsoBI CYCGRG 2 cut(s) 1342, 2543
Bsp1286I GDGCHC 3 cut(s) 435, 609, 2544
Bsp13I TCCGGA 1 cut(s) 1053
Bsp143I GATC 9 cut(s) 166, 790, 823, 892, 917, 1048, 1194, 1970, 2683
BspACI CCGC 3 cut(s) 65, 558, 591
BspANI GGCC 7 cut(s) 561, 1456, 1700, 2294, 2346, 2480, 2515
BspCNI CTCAG 9 cut(s) 246, 277, 281, 565, 700, 771, 825, 1585, 2496
BspEI TCCGGA 1 cut(s) 1053
BspMAI CTGCAG 2 cut(s) 770, 777
BspMI ACCTGC 1 cut(s) 1241
BspOI GCTAGC 1 cut(s) 1149
BspPI GGATC 7 cut(s) 161, 174, 925, 1189, 1202, 1965, 1978
BspQI GCTCTTC 1 cut(s) 600
BspT107I GGYRCC 1 cut(s) 2108
BsrBI CCGCTC 1 cut(s) 593
BsrDI GCAATG 1 cut(s) 1701
BsrFI RCCGGY 2 cut(s) 2380, 2511
BsrI ACTGG 7 cut(s) 716, 1253, 1420, 2126, 2347, 2647, 2691
BssAI RCCGGY 2 cut(s) 2380, 2511
BssECI CCNNGG 3 cut(s) 662, 2139, 2214
BssMI GATC 9 cut(s) 166, 790, 823, 892, 917, 1048, 1194, 1970, 2683
BssT1I CCWWGG 1 cut(s) 2139
Bst2UI CCWGG 3 cut(s) 663, 1864, 2150
Bst4CI ACNGT 4 cut(s) 989, 1732, 2060, 2365
Bst6I CTCTTC 2 cut(s) 600, 1377
BstBAI YACGTR 3 cut(s) 2117, 2171, 2356
BstC8I GCNNGC 1 cut(s) 1147
BstF5I GGATG 4 cut(s) 103, 1264, 1473, 2533
BstH2I RGCGCY 1 cut(s) 284
BstHHI GCGC 3 cut(s) 283, 519, 672
BstKTI GATC 9 cut(s) 169, 793, 826, 895, 920, 1051, 1197, 1973, 2686
BstMAI GTCTC 4 cut(s) 761, 1642, 1780, 2047
BstMBI GATC 9 cut(s) 166, 790, 823, 892, 917, 1048, 1194, 1970, 2683
BstMCI CGRYCG 1 cut(s) 2512
BstMWI GCNNNNNNNGC 4 cut(s) 107, 250, 430, 2291
BstNI CCWGG 3 cut(s) 663, 1864, 2150
BstNSI RCATGY 2 cut(s) 236, 1251
BstSCI CCNGG 6 cut(s) 134, 237, 661, 1862, 2148, 2566
BstSFI CTRYAG 5 cut(s) 766, 773, 1944, 1976, 2361
BstSNI TACGTA 2 cut(s) 2171, 2356
BstV1I GCAGC 3 cut(s) 231, 531, 1694
BstX2I RGATCY 5 cut(s) 166, 823, 917, 1194, 1970
BstYI RGATCY 5 cut(s) 166, 823, 917, 1194, 1970
BsuI GTATCC 4 cut(s) 218, 795, 2048, 2454
BsuRI GGCC 7 cut(s) 561, 1456, 1700, 2294, 2346, 2480, 2515
BtsCI GGATG 4 cut(s) 103, 1264, 1473, 2533
BtsI GCAGTG 1 cut(s) 117
BtsIMutI CAGTG 4 cut(s) 117, 1260, 2607, 2698
BveI ACCTGC 1 cut(s) 1241
Cac8I GCNNGC 1 cut(s) 1147
CaiI CAGNNNCTG 1 cut(s) 765
CfoI GCGC 3 cut(s) 283, 519, 672
Cfr10I RCCGGY 2 cut(s) 2380, 2511
Cfr13I GGNCC 9 cut(s) 186, 848, 1454, 1589, 1622, 1698, 2345, 2479, 2647
Csp6I GTAC 2 cut(s) 1026, 2109
CspAI ACCGGT 1 cut(s) 2380
CviQI GTAC 2 cut(s) 1026, 2109
DpnI GATC 9 cut(s) 168, 792, 825, 894, 919, 1050, 1196, 1972, 2685
DpnII GATC 9 cut(s) 166, 790, 823, 892, 917, 1048, 1194, 1970, 2683
EaeI YGGCCR 3 cut(s) 559, 2292, 2513
Eam1104I CTCTTC 2 cut(s) 600, 1377
EarI CTCTTC 2 cut(s) 600, 1377
Ecl136II GAGCTC 2 cut(s) 433, 2542
Eco105I TACGTA 2 cut(s) 2171, 2356
Eco130I CCWWGG 1 cut(s) 2139
Eco24I GRGCYC 2 cut(s) 435, 2544
Eco32I GATATC 1 cut(s) 635
Eco47I GGWCC 5 cut(s) 186, 848, 1589, 1622, 2647
Eco53kI GAGCTC 2 cut(s) 433, 2542
Eco57I CTGAAG 6 cut(s) 111, 538, 938, 948, 1200, 2140
Eco88I CYCGRG 2 cut(s) 1342, 2543
EcoICRI GAGCTC 2 cut(s) 433, 2542
EcoO109I RGGNCCY 3 cut(s) 1454, 1622, 2647
EcoRI GAATTC 3 cut(s) 647, 1991, 2196
EcoRII CCWGG 3 cut(s) 661, 1862, 2148
EcoRV GATATC 1 cut(s) 635
EcoT14I CCWWGG 1 cut(s) 2139
EcoT22I ATGCAT 2 cut(s) 103, 1473
EcoT38I GRGCYC 2 cut(s) 435, 2544
ErhI CCWWGG 1 cut(s) 2139
FalI AAGNNNNNCTT 2 cut(s) 2184, 2216
FaqI GGGAC 7 cut(s) 170, 229, 358, 980, 1635, 2353, 2660
FauI CCCGC 1 cut(s) 598
FauNDI CATATG 2 cut(s) 537, 1594
Fnu4HI GCNGC 4 cut(s) 245, 520, 559, 1683
FokI GGATG 4 cut(s) 110, 1271, 1480, 2540
FriOI GRGCYC 2 cut(s) 435, 2544
Fsp4HI GCNGC 4 cut(s) 245, 520, 559, 1683
FspBI CTAG 8 cut(s) 59, 821, 1035, 1118, 1146, 1395, 1856, 2315
FspI TGCGCA 2 cut(s) 518, 671
GlaI GCGC 3 cut(s) 282, 518, 671
GluI GCNGC 4 cut(s) 245, 520, 559, 1683
GsaI CCCAGC 1 cut(s) 1622
GsuI CTGGAG 1 cut(s) 1080
HaeII RGCGCY 1 cut(s) 284
HaeIII GGCC 7 cut(s) 561, 1456, 1700, 2294, 2346, 2480, 2515
HapII CCGG 8 cut(s) 135, 189, 238, 799, 1054, 2381, 2512, 2567
HhaI GCGC 3 cut(s) 283, 519, 672
Hin6I GCGC 3 cut(s) 281, 517, 670
HinP1I GCGC 3 cut(s) 281, 517, 670
HincII GTYRAC 2 cut(s) 469, 1425
HindII GTYRAC 2 cut(s) 469, 1425
HinfI GANTC 8 cut(s) 131, 262, 712, 835, 1090, 1205, 2270, 2304
HpaI GTTAAC 1 cut(s) 1425
HpaII CCGG 8 cut(s) 135, 189, 238, 799, 1054, 2381, 2512, 2567
HphI GGTGA 6 cut(s) 218, 1099, 1302, 1994, 2395, 2545
Hpy166II GTNNAC 7 cut(s) 469, 511, 1425, 1463, 1746, 1836, 2586
Hpy8I GTNNAC 7 cut(s) 469, 511, 1425, 1463, 1746, 1836, 2586
Hpy99I CGWCG 1 cut(s) 1801
HpyCH4III ACNGT 4 cut(s) 989, 1732, 2060, 2365
HpyCH4IV ACGT 7 cut(s) 374, 1957, 2116, 2170, 2355, 2657, 2670
HpyF10VI GCNNNNNNNGC 4 cut(s) 107, 250, 430, 2291
HpySE526I ACGT 7 cut(s) 374, 1957, 2116, 2170, 2355, 2657, 2670
HspAI GCGC 3 cut(s) 281, 517, 670
Kpn2I TCCGGA 1 cut(s) 1053
KpnI GGTACC 1 cut(s) 2112
KspAI GTTAAC 1 cut(s) 1425
Kzo9I GATC 9 cut(s) 166, 790, 823, 892, 917, 1048, 1194, 1970, 2683
LguI GCTCTTC 1 cut(s) 600
LmnI GCTCC 5 cut(s) 241, 779, 2074, 2539, 2570
Lsp1109I GCAGC 3 cut(s) 231, 531, 1694
LweI GCATC 6 cut(s) 88, 1316, 1458, 1557, 1671, 1742
MaeI CTAG 8 cut(s) 59, 821, 1035, 1118, 1146, 1395, 1856, 2315
MaeII ACGT 7 cut(s) 374, 1957, 2116, 2170, 2355, 2657, 2670
MaeIII GTNAC 4 cut(s) 76, 718, 1105, 2117
MalI GATC 9 cut(s) 168, 792, 825, 894, 919, 1050, 1196, 1972, 2685
MbiI CCGCTC 1 cut(s) 593
MboI GATC 9 cut(s) 166, 790, 823, 892, 917, 1048, 1194, 1970, 2683
MfeI CAATTG 1 cut(s) 888
MflI RGATCY 5 cut(s) 166, 823, 917, 1194, 1970
MhlI GDGCHC 3 cut(s) 435, 609, 2544
MlyI GAGTC 2 cut(s) 2264, 2298
MmeI TCCRAC 4 cut(s) 678, 2298, 2505, 2691
Mph1103I ATGCAT 2 cut(s) 103, 1473
MroI TCCGGA 1 cut(s) 1053
MroXI GAANNNNTTC 5 cut(s) 1275, 1481, 1580, 2437, 2457
MseI TTAA 7 cut(s) 752, 912, 1391, 1424, 1517, 2247, 2621
MslI CAYNNNNRTG 1 cut(s) 2452
MspA1I CMGCKG 3 cut(s) 558, 1685, 1943
MspI CCGG 8 cut(s) 135, 189, 238, 799, 1054, 2381, 2512, 2567
MspR9I CCNGG 6 cut(s) 136, 239, 663, 1864, 2150, 2568
MunI CAATTG 1 cut(s) 888
Mva1269I GAATGC 1 cut(s) 1147
MvaI CCWGG 3 cut(s) 663, 1864, 2150
MwoI GCNNNNNNNGC 4 cut(s) 107, 250, 430, 2291
NciI CCSGG 3 cut(s) 136, 239, 2568
NdeI CATATG 2 cut(s) 537, 1594
NdeII GATC 9 cut(s) 166, 790, 823, 892, 917, 1048, 1194, 1970, 2683
NheI GCTAGC 1 cut(s) 1145
NmuCI GTSAC 2 cut(s) 1105, 2117
NsbI TGCGCA 2 cut(s) 518, 671
NsiI ATGCAT 2 cut(s) 103, 1473
NspI RCATGY 2 cut(s) 236, 1251
PaeR7I CTCGAG 1 cut(s) 2543
PciSI GCTCTTC 1 cut(s) 600
PctI GAATGC 1 cut(s) 1147
PdmI GAANNNNTTC 5 cut(s) 1275, 1481, 1580, 2437, 2457
PfeI GAWTC 6 cut(s) 131, 262, 712, 835, 1090, 1205
PflMI CCANNNNNTGG 1 cut(s) 863
PfoI TCCNGGA 2 cut(s) 134, 237
PinAI ACCGGT 1 cut(s) 2380
PkrI GCNGC 4 cut(s) 246, 521, 560, 1684
PleI GAGTC 2 cut(s) 2264, 2298
PpsI GAGTC 2 cut(s) 2264, 2298
Ppu21I YACGTR 3 cut(s) 2117, 2171, 2356
PpuMI RGGWCCY 2 cut(s) 1622, 2647
PsiI TTATAA 2 cut(s) 1691, 1917
Psp124BI GAGCTC 2 cut(s) 435, 2544
Psp5II RGGWCCY 2 cut(s) 1622, 2647
Psp6I CCWGG 3 cut(s) 661, 1862, 2148
PspFI CCCAGC 1 cut(s) 1618
PspGI CCWGG 3 cut(s) 661, 1862, 2148
PspPI GGNCC 9 cut(s) 186, 848, 1454, 1589, 1622, 1698, 2345, 2479, 2647
PspPPI RGGWCCY 2 cut(s) 1622, 2647
PstI CTGCAG 2 cut(s) 770, 777
PstNI CAGNNNCTG 1 cut(s) 765
PsuI RGATCY 5 cut(s) 166, 823, 917, 1194, 1970
PvuII CAGCTG 2 cut(s) 1685, 1943
RsaI GTAC 2 cut(s) 1027, 2110
RsaNI GTAC 2 cut(s) 1026, 2109
RseI CAYNNNNRTG 1 cut(s) 2452
SacI GAGCTC 2 cut(s) 435, 2544
SapI GCTCTTC 1 cut(s) 600
SaqAI TTAA 7 cut(s) 752, 912, 1391, 1424, 1517, 2247, 2621
SatI GCNGC 4 cut(s) 245, 520, 559, 1683
Sau3AI GATC 9 cut(s) 166, 790, 823, 892, 917, 1048, 1194, 1970, 2683
Sau96I GGNCC 9 cut(s) 186, 848, 1454, 1589, 1622, 1698, 2345, 2479, 2647
SchI GAGTC 2 cut(s) 2264, 2298
ScrFI CCNGG 6 cut(s) 136, 239, 663, 1864, 2150, 2568
SduI GDGCHC 3 cut(s) 435, 609, 2544
SfaNI GCATC 6 cut(s) 88, 1316, 1458, 1557, 1671, 1742
SfcI CTRYAG 5 cut(s) 766, 773, 1944, 1976, 2361
Sfr274I CTCGAG 1 cut(s) 2543
SgrAI CRCCGGYG 1 cut(s) 2380
SinI GGWCC 5 cut(s) 186, 848, 1589, 1622, 2647
SlaI CTCGAG 1 cut(s) 2543
SmiMI CAYNNNNRTG 1 cut(s) 2452
SmlI CTYRAG 3 cut(s) 337, 1111, 2543
SmoI CTYRAG 3 cut(s) 337, 1111, 2543
SnaBI TACGTA 2 cut(s) 2171, 2356
SpeI ACTAGT 1 cut(s) 1394
SsiI CCGC 3 cut(s) 65, 558, 591
SspMI CTAG 8 cut(s) 59, 821, 1035, 1118, 1146, 1395, 1856, 2315
SstI GAGCTC 2 cut(s) 435, 2544
StyD4I CCNGG 6 cut(s) 134, 237, 661, 1862, 2148, 2566
StyI CCWWGG 1 cut(s) 2139
TaaI ACNGT 4 cut(s) 989, 1732, 2060, 2365
TaiI ACGT 7 cut(s) 377, 1960, 2119, 2173, 2358, 2660, 2673
TaqI TCGA 7 cut(s) 684, 1605, 1799, 2032, 2544, 2633, 2719
TaqII GACCGA 1 cut(s) 2015
TatI WGTACW 1 cut(s) 1025
TauI GCSGC 1 cut(s) 561
TfiI GAWTC 6 cut(s) 131, 262, 712, 835, 1090, 1205
Tru1I TTAA 7 cut(s) 752, 912, 1391, 1424, 1517, 2247, 2621
Tru9I TTAA 7 cut(s) 752, 912, 1391, 1424, 1517, 2247, 2621
TscAI CASTG 4 cut(s) 117, 1260, 2614, 2698
TseFI GTSAC 2 cut(s) 1105, 2117
TseI GCWGC 3 cut(s) 244, 519, 1682
Tsp45I GTSAC 2 cut(s) 1105, 2117
TspGWI ACGGA 2 cut(s) 930, 1480
TspRI CASTG 4 cut(s) 117, 1260, 2614, 2698
Van91I CCANNNNNTGG 1 cut(s) 863
VpaK11BI GGWCC 5 cut(s) 186, 848, 1589, 1622, 2647
XapI RAATTY 6 cut(s) 564, 647, 1213, 1565, 1991, 2196
XbaI TCTAGA 1 cut(s) 820
XceI RCATGY 2 cut(s) 236, 1251
XcmI CCANNNNNNNNNTGG 1 cut(s) 2146
XhoI CTCGAG 1 cut(s) 2543
XmnI GAANNNNTTC 5 cut(s) 1275, 1481, 1580, 2437, 2457
XspI CTAG 8 cut(s) 59, 821, 1035, 1118, 1146, 1395, 1856, 2315
Zsp2I ATGCAT 2 cut(s) 103, 1473
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.