Rh3BG100400
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0002297
Physical Location & Seq
Reverse (-)
8006328 .. 8013942
7615 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG100400.1

Sequence Viewer

Length: 2421 bp
ATGTTGAGACTGAGATTTTGGGGTTGCCTCATTGGTCTGGCTTGTTCTTGCTTCTTCCTAGTTGCGGTTGCACAAGTTACTAATCCTTCTGAAGTGGATGCATTGAGAGCAGTGAAGGGTAGTCTGATTGATTCCGGGAAGCATTTGGGGAATTGGGACAAAGGGGATCCATGTAAAGCGAATTGGACCGGAGTTTTGTGCTCCGGTGACGTTGGGACTGATGGATACTTGCATGTCCAGGAGCTGCAACTGCTAAGTAAGAATCTCTCAGGAACGTTAGCGCCTGAGCTTGGCAAACTATCTCAACTTCTGATATTAGATTTCATGTGGAATAACTTAAGTGGGACTATACCGAAGGAGATAGGAAACATTACGCCCTTGAAACTCTTGCTCTTGAATGGAAACAAACTATCGGGTTCCTTGCCTGATGAGCTCGGTTCTCTTGAAAATCTACGTAGACTACAAGTTGACGAGAACCATCTTTCAGGTTCAATACCAAAATCATTTCTTAACTTGCGCGGCTTAAAACATCTCCATATGAACAACAACTCCTTCAGCGGCCAAATTCCATCTGAGATTTCTGAAATACCCGCTCTTCTTCATGTGCTCTTGGATAATAATAACTTATCTGGATATCTTCCACCAGACTTCTCCAACATACCAGAGTTGCGCATACTTCAACTCGATAACAACAACTTCACGGGAACTGAGATTCCAGCTACTTATGGAACCCTTTCCGGATTGGTAAAGTTAAGTCTCAGGAACTGCAGTTTGCAGGGAGCAATTCCTGATCTTAGCCGGATACGTAACCTCAGTTATCTAGATCTAAGCTGGAATCATCTTGCTGGACCGATACCATCACATGGGCTTTCTGACAATATGACAACAATTGTTCTGTCAGATAATCATCTTAGCGGATCTATTCCTGAAGGTTTCTCTCATTTTCCTCGTCTTCAGAAATTGTCGCTCAAAAATAATCAGTTGAACGGTTCTGTCCCTGCTATATGGAGGAACATATCTTTTAGTACAAGAGCTAGACTTTCACTTGATCTCCGGAACAATTCACTCTCTAACATATTGGGAGAGCTGAATCCTCCAGCAAATGTCACCTTGTGGCTTGAAGGAAATCCTATTTGCAAGAATGCTAGCATAGAAAATATAAGCCCGTTCTGTCAATCTGAAGCGAGCAATGGGATCCCCAAAGATTCAATAAATTCAACTCATAAGATGACCTGCCTTATTCAGGAATGTCCAGTGGATGATTTCTATGAATATGTTCCATCTTCCCCTGTGCCATGCTTTTGTGCATCACCTATTATAGTTGAATATCGTCTGAAAAGCCCGAGCTTTTCTTACTTTGGTCCATATAAACAGCAGTTTGAAGAGTATATAACTAGGTCTCTAAAATTGGAGATTTACCAGTTATATATTAGTTCCTTTGTCTGGGAAGAAGGGCCTCGTTTACGGATGCAGTTGAAGTTCTTCCCTGTGTATGGTGCTTCACACTCGCATGCATTAAATGCAAGTGAGGTTCTGCGAATTAGAGGCATCTTTACATCATGGGAATTTTCTCAGAATCAATTCTTTGGACCATATGAGCTACTCGACTTCAAACTGCTGGGACCTTATTCAAATATGATTGTTAAGAGACAAAAGACGGGCCTCAGTAAGGGTGTATTAGCAGCTGTTATAATAGGGGCCATTGCTTCTGTTGTCAGTATAACTGCAACAGTCATGCTTCTGTTCACAAGATGCACCAGAAACCGATACACACCACCTTCAAGGAGACACTCGTCGTGGAAGATTTCTATGAGAATTGAGGGTGTAAAGGCGTTCACTTTCAAAGAAATGACACTAGCCACCAGGAACTTTGATAGTGCATCTCAACTTGGACAAGGAGGCTATGGGAAAGTTTATAAAGGTATCTTATCTGATACCATAGCTGTAGCCATAAAGCGTGCAGAAGCAGGATCCCTACAGGGTGAAAGAGAATTCTTGACCGAGATACAATTATTATCAAGGCTACACCATCGAAACTTAGTCTCTTTGGTAGGATACTGTGAAGAAGAAGGGGAGCAGGTGAATATGGCTCATCAGTCAGGCTTGATGTTCTCAATTATAGATAGCAGAATGGGTTCGTATCCATCTGAATGTGTTCAGAGGTTTGTAGCTTTGGCCCTCAGATGTTGCCATGATAAACAAGACGACCGGCCATCGATGTTGGATGTGGTGAGGGAGCTCGAGAACATAATCAAACTCATGCCGGGAGCTGAAACAATGTTTTCACCATCTGGTTCCTCATACACTGAAAAATCATTAACTTCATCATCGACTTTTACTGGGGACCCATATATGTCCTCCTCCAACGTGGAAGGAAGTGATCTAACCAGTGGTGTAATCCCTACCATCTCGCCTCGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

806

Amino Acids

89.2

Weight (kDa)

7.24

Isoelectric Point (pI)

42.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 29 - 68 3.9e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 93 - 182 2.9e-07 Leucine-rich repeat region
LRR_8 PF13855 150 - 209 6.6e-06 Leucine rich repeat
LRR_14 PF23598 170 - 352 5.7e-06 Leucine-rich repeat region
LRR_8 PF13855 221 - 281 9.6e-06 Leucine rich repeat
Pkinase PF00069 626 - 708 2.9e-09 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 628 - 692 1.3e-10 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1691, 1917
AarI CACCTGC 1 cut(s) 2068
Acc16I TGCGCA 1 cut(s) 671
Acc36I ACCTGC 2 cut(s) 1241, 2068
AccB7I CCANNNNNTGG 1 cut(s) 863
AccBSI CCGCTC 1 cut(s) 593
AccI GTMKAC 1 cut(s) 457
AccII CGCG 1 cut(s) 519
AccIII TCCGGA 2 cut(s) 737, 1053
AciI CCGC 5 cut(s) 65, 519, 558, 591, 915
AclI AACGTT 1 cut(s) 275
AclWI GGATC 7 cut(s) 161, 174, 925, 1189, 1202, 1965, 1978
AcoI YGGCCR 2 cut(s) 559, 2210
AcsI RAATTY 4 cut(s) 564, 1213, 1565, 1991
AcuI CTGAAG 5 cut(s) 111, 538, 938, 948, 1200
AdeI CACNNNGTG 1 cut(s) 1113
AfaI GTAC 1 cut(s) 1027
AfiI CCNNNNNNNGG 7 cut(s) 64, 290, 863, 1243, 1443, 1493, 1669
AflII CTTAAG 1 cut(s) 337
AjnI CCWGG 2 cut(s) 237, 1862
AloI GAACNNNNNNTCC 4 cut(s) 533, 565, 697, 729
Alw21I GWGCWC 4 cut(s) 203, 435, 609, 2241
Alw26I GTCTC 5 cut(s) 761, 1404, 1642, 1780, 2047
AlwI GGATC 7 cut(s) 161, 174, 925, 1189, 1202, 1965, 1978
AlwNI CAGNNNCTG 2 cut(s) 244, 765
Ama87I CYCGRG 2 cut(s) 1342, 2240
Aor13HI TCCGGA 2 cut(s) 737, 1053
AoxI GGCC 6 cut(s) 559, 1454, 1660, 1698, 2175, 2210
ApeKI GCWGC 2 cut(s) 244, 1682
ApoI RAATTY 4 cut(s) 564, 1213, 1565, 1991
ArsI GACNNNNNNTTYG 3 cut(s) 32, 178, 210
Asp700I GAANNNNTTC 6 cut(s) 733, 1275, 1481, 1580, 2134, 2154
AspLEI GCGC 3 cut(s) 283, 519, 672
AsuC2I CCSGG 2 cut(s) 136, 2265
AsuHPI GGTGA 7 cut(s) 218, 1099, 1302, 1994, 2092, 2242, 2277
AsuNHI GCTAGC 1 cut(s) 1145
AvaI CYCGRG 2 cut(s) 1342, 2240
AvaII GGWCC 6 cut(s) 186, 848, 1361, 1589, 1622, 2344
BamHI GGATCC 3 cut(s) 166, 1194, 1970
BanII GRGCYC 2 cut(s) 435, 2241
BbsI GAAGAC 1 cut(s) 944
Bbv12I GWGCWC 4 cut(s) 203, 435, 609, 2241
BbvI GCAGC 2 cut(s) 231, 1694
BciT130I CCWGG 2 cut(s) 239, 1864
BciVI GTATCC 4 cut(s) 218, 795, 2048, 2151
BcnI CCSGG 2 cut(s) 136, 2265
BcoDI GTCTC 5 cut(s) 761, 1404, 1642, 1780, 2047
BfaI CTAG 6 cut(s) 59, 821, 1035, 1146, 1395, 1856
BfmI CTRYAG 3 cut(s) 766, 1944, 1976
BfoI RGCGCY 1 cut(s) 284
BfrI CTTAAG 1 cut(s) 337
BfuAI ACCTGC 2 cut(s) 1241, 2068
BfuI GTATCC 4 cut(s) 218, 795, 2048, 2151
BglII AGATCT 1 cut(s) 823
BisI GCNGC 4 cut(s) 245, 520, 559, 1683
BlsI GCNGC 4 cut(s) 246, 521, 560, 1684
Bme1390I CCNGG 4 cut(s) 136, 239, 1864, 2265
Bme18I GGWCC 6 cut(s) 186, 848, 1361, 1589, 1622, 2344
BmeT110I CYCGRG 2 cut(s) 1342, 2240
BmrFI CCNGG 4 cut(s) 136, 239, 1864, 2265
BmrI ACTGGG 1 cut(s) 2349
BmsI GCATC 6 cut(s) 88, 1316, 1458, 1557, 1742, 1889
BmtI GCTAGC 1 cut(s) 1149
BmuI ACTGGG 1 cut(s) 2349
BoxI GACNNNNGTC 1 cut(s) 1792
BpiI GAAGAC 1 cut(s) 944
BpmI CTGGAG 1 cut(s) 1080
Bpu10I CCTNAGC 1 cut(s) 285
BpuMI CCSGG 2 cut(s) 136, 2265
Bsa29I ATCGAT 1 cut(s) 2216
BsaAI YACGTR 2 cut(s) 455, 806
BsaBI GATNNNNATC 1 cut(s) 906
BsaI GGTCTC 1 cut(s) 1404
BsaJI CCNNGG 1 cut(s) 2414
BsaWI WCCGGW 4 cut(s) 188, 203, 737, 1053
BsaXI ACNNNNNCTCC 4 cut(s) 533, 563, 1035, 1065
Bsc4I CCNNNNNNNGG 7 cut(s) 64, 290, 863, 1243, 1443, 1493, 1669
Bse118I RCCGGY 1 cut(s) 2208
Bse1I ACTGG 4 cut(s) 1253, 1420, 2344, 2388
Bse3DI GCAATG 2 cut(s) 1195, 1701
Bse8I GATNNNNATC 1 cut(s) 906
BseAI TCCGGA 2 cut(s) 737, 1053
BseBI CCWGG 2 cut(s) 239, 1864
BseCI ATCGAT 1 cut(s) 2216
BseDI CCNNGG 1 cut(s) 2414
BseGI GGATG 4 cut(s) 103, 1264, 1473, 2230
BseJI GATNNNNATC 1 cut(s) 906
BseLI CCNNNNNNNGG 7 cut(s) 64, 290, 863, 1243, 1443, 1493, 1669
BseMI GCAATG 2 cut(s) 1195, 1701
BseMII CTCAG 9 cut(s) 276, 282, 564, 699, 772, 826, 1586, 1678, 2194
BseNI ACTGG 4 cut(s) 1253, 1420, 2344, 2388
BseRI GAGGAG 1 cut(s) 2350
BseXI GCAGC 2 cut(s) 231, 1694
BseYI CCCAGC 1 cut(s) 1618
BsgI GTGCAG 1 cut(s) 1980
Bsh1236I CGCG 1 cut(s) 519
Bsh1285I CGRYCG 1 cut(s) 2209
BshFI GGCC 6 cut(s) 561, 1456, 1662, 1700, 2177, 2212
BshVI ATCGAT 1 cut(s) 2216
BsiEI CGRYCG 1 cut(s) 2209
BsiHKAI GWGCWC 4 cut(s) 203, 435, 609, 2241
BsiHKCI CYCGRG 2 cut(s) 1342, 2240
BsiSI CCGG 8 cut(s) 135, 189, 204, 738, 799, 1054, 2209, 2264
BslFI GGGAC 6 cut(s) 170, 229, 358, 980, 1635, 2357
BslI CCNNNNNNNGG 7 cut(s) 64, 290, 863, 1243, 1443, 1493, 1669
BsmAI GTCTC 5 cut(s) 761, 1404, 1642, 1780, 2047
BsmFI GGGAC 6 cut(s) 170, 229, 358, 980, 1635, 2357
BsmI GAATGC 1 cut(s) 1147
BsnI GGCC 6 cut(s) 561, 1456, 1662, 1700, 2177, 2212
Bso31I GGTCTC 1 cut(s) 1404
BsoBI CYCGRG 2 cut(s) 1342, 2240
Bsp1286I GDGCHC 4 cut(s) 203, 435, 609, 2241
Bsp13I TCCGGA 2 cut(s) 737, 1053
Bsp143I GATC 8 cut(s) 166, 790, 823, 917, 1048, 1194, 1970, 2380
BspACI CCGC 5 cut(s) 65, 519, 558, 591, 915
BspANI GGCC 6 cut(s) 561, 1456, 1662, 1700, 2177, 2212
BspCNI CTCAG 9 cut(s) 277, 281, 565, 700, 771, 825, 1585, 1677, 2193
BspDI ATCGAT 1 cut(s) 2216
BspEI TCCGGA 2 cut(s) 737, 1053
BspFNI CGCG 1 cut(s) 519
BspMAI CTGCAG 1 cut(s) 770
BspMI ACCTGC 2 cut(s) 1241, 2068
BspOI GCTAGC 1 cut(s) 1149
BspPI GGATC 7 cut(s) 161, 174, 925, 1189, 1202, 1965, 1978
BspQI GCTCTTC 1 cut(s) 600
BspTI CTTAAG 1 cut(s) 337
BspTNI GGTCTC 1 cut(s) 1404
BsrBI CCGCTC 1 cut(s) 593
BsrDI GCAATG 2 cut(s) 1195, 1701
BsrFI RCCGGY 1 cut(s) 2208
BsrI ACTGG 4 cut(s) 1253, 1420, 2344, 2388
BssAI RCCGGY 1 cut(s) 2208
BssECI CCNNGG 1 cut(s) 2414
BssMI GATC 8 cut(s) 166, 790, 823, 917, 1048, 1194, 1970, 2380
Bst2UI CCWGG 2 cut(s) 239, 1864
Bst4CI ACNGT 3 cut(s) 989, 1732, 2060
Bst6I CTCTTC 2 cut(s) 600, 1377
BstAFI CTTAAG 1 cut(s) 337
BstAPI GCANNNNNTGC 1 cut(s) 1520
BstBAI YACGTR 2 cut(s) 455, 806
BstC8I GCNNGC 4 cut(s) 1147, 1186, 1512, 1959
BstENI CCTNNNNNAGG 2 cut(s) 1241, 1667
BstF5I GGATG 4 cut(s) 103, 1264, 1473, 2230
BstFNI CGCG 1 cut(s) 519
BstH2I RGCGCY 1 cut(s) 284
BstHHI GCGC 3 cut(s) 283, 519, 672
BstKTI GATC 8 cut(s) 169, 793, 826, 920, 1051, 1197, 1973, 2383
BstMAI GTCTC 5 cut(s) 761, 1404, 1642, 1780, 2047
BstMBI GATC 8 cut(s) 166, 790, 823, 917, 1048, 1194, 1970, 2380
BstMCI CGRYCG 1 cut(s) 2209
BstMWI GCNNNNNNNGC 4 cut(s) 107, 250, 430, 1520
BstNI CCWGG 2 cut(s) 239, 1864
BstNSI RCATGY 2 cut(s) 236, 1514
BstPAI GACNNNNGTC 1 cut(s) 1792
BstSCI CCNGG 4 cut(s) 134, 237, 1862, 2263
BstSFI CTRYAG 3 cut(s) 766, 1944, 1976
BstSNI TACGTA 2 cut(s) 455, 806
BstUI CGCG 1 cut(s) 519
BstV1I GCAGC 2 cut(s) 231, 1694
BstV2I GAAGAC 1 cut(s) 944
BstX2I RGATCY 5 cut(s) 166, 823, 917, 1194, 1970
BstYI RGATCY 5 cut(s) 166, 823, 917, 1194, 1970
Bsu15I ATCGAT 1 cut(s) 2216
BsuI GTATCC 4 cut(s) 218, 795, 2048, 2151
BsuRI GGCC 6 cut(s) 561, 1456, 1662, 1700, 2177, 2212
BsuTUI ATCGAT 1 cut(s) 2216
BtsCI GGATG 4 cut(s) 103, 1264, 1473, 2230
BtsI GCAGTG 1 cut(s) 117
BtsIMutI CAGTG 4 cut(s) 117, 1260, 2304, 2395
BveI ACCTGC 2 cut(s) 1241, 2068
Cac8I GCNNGC 4 cut(s) 1147, 1186, 1512, 1959
CaiI CAGNNNCTG 2 cut(s) 244, 765
CfoI GCGC 3 cut(s) 283, 519, 672
Cfr10I RCCGGY 1 cut(s) 2208
ClaI ATCGAT 1 cut(s) 2216
Csp6I GTAC 1 cut(s) 1026
CviQI GTAC 1 cut(s) 1026
DpnI GATC 8 cut(s) 168, 792, 825, 919, 1050, 1196, 1972, 2382
DpnII GATC 8 cut(s) 166, 790, 823, 917, 1048, 1194, 1970, 2380
DraIII CACNNNGTG 1 cut(s) 1113
EaeI YGGCCR 2 cut(s) 559, 2210
Eam1104I CTCTTC 2 cut(s) 600, 1377
EarI CTCTTC 2 cut(s) 600, 1377
Ecl136II GAGCTC 2 cut(s) 433, 2239
Eco105I TACGTA 2 cut(s) 455, 806
Eco24I GRGCYC 2 cut(s) 435, 2241
Eco31I GGTCTC 1 cut(s) 1404
Eco32I GATATC 1 cut(s) 635
Eco47I GGWCC 6 cut(s) 186, 848, 1361, 1589, 1622, 2344
Eco53kI GAGCTC 2 cut(s) 433, 2239
Eco57I CTGAAG 5 cut(s) 111, 538, 938, 948, 1200
Eco88I CYCGRG 2 cut(s) 1342, 2240
EcoICRI GAGCTC 2 cut(s) 433, 2239
EcoNI CCTNNNNNAGG 2 cut(s) 1241, 1667
EcoO109I RGGNCCY 3 cut(s) 1454, 1622, 2344
EcoRI GAATTC 1 cut(s) 1991
EcoRII CCWGG 2 cut(s) 237, 1862
EcoRV GATATC 1 cut(s) 635
EcoT22I ATGCAT 2 cut(s) 103, 1516
EcoT38I GRGCYC 2 cut(s) 435, 2241
FaqI GGGAC 6 cut(s) 170, 229, 358, 980, 1635, 2357
FauI CCCGC 1 cut(s) 598
FauNDI CATATG 2 cut(s) 537, 1594
FblI GTMKAC 1 cut(s) 457
Fnu4HI GCNGC 4 cut(s) 245, 520, 559, 1683
FokI GGATG 4 cut(s) 110, 1271, 1480, 2237
FriOI GRGCYC 2 cut(s) 435, 2241
Fsp4HI GCNGC 4 cut(s) 245, 520, 559, 1683
FspBI CTAG 6 cut(s) 59, 821, 1035, 1146, 1395, 1856
FspI TGCGCA 1 cut(s) 671
GlaI GCGC 3 cut(s) 282, 518, 671
GluI GCNGC 4 cut(s) 245, 520, 559, 1683
GsaI CCCAGC 1 cut(s) 1622
GsuI CTGGAG 1 cut(s) 1080
HaeII RGCGCY 1 cut(s) 284
HaeIII GGCC 6 cut(s) 561, 1456, 1662, 1700, 2177, 2212
HapII CCGG 8 cut(s) 135, 189, 204, 738, 799, 1054, 2209, 2264
HhaI GCGC 3 cut(s) 283, 519, 672
Hin6I GCGC 3 cut(s) 281, 517, 670
HinP1I GCGC 3 cut(s) 281, 517, 670
HincII GTYRAC 1 cut(s) 469
HindII GTYRAC 1 cut(s) 469
HinfI GANTC 7 cut(s) 131, 262, 712, 835, 1090, 1205, 1576
HpaII CCGG 8 cut(s) 135, 189, 204, 738, 799, 1054, 2209, 2264
HphI GGTGA 7 cut(s) 218, 1099, 1302, 1994, 2092, 2242, 2277
Hpy166II GTNNAC 5 cut(s) 458, 469, 1463, 1746, 1836
Hpy8I GTNNAC 5 cut(s) 458, 469, 1463, 1746, 1836
Hpy99I CGWCG 1 cut(s) 1798
HpyCH4III ACNGT 3 cut(s) 989, 1732, 2060
HpyCH4IV ACGT 5 cut(s) 210, 275, 454, 805, 2367
HpyF10VI GCNNNNNNNGC 4 cut(s) 107, 250, 430, 1520
HpySE526I ACGT 5 cut(s) 210, 275, 454, 805, 2367
HspAI GCGC 3 cut(s) 281, 517, 670
KflI GGGWCCC 1 cut(s) 2344
Kpn2I TCCGGA 2 cut(s) 737, 1053
Kzo9I GATC 8 cut(s) 166, 790, 823, 917, 1048, 1194, 1970, 2380
LguI GCTCTTC 1 cut(s) 600
LmnI GCTCC 6 cut(s) 206, 241, 779, 2074, 2236, 2267
Lsp1109I GCAGC 2 cut(s) 231, 1694
LweI GCATC 6 cut(s) 88, 1316, 1458, 1557, 1742, 1889
MaeI CTAG 6 cut(s) 59, 821, 1035, 1146, 1395, 1856
MaeII ACGT 5 cut(s) 210, 275, 454, 805, 2367
MaeIII GTNAC 4 cut(s) 76, 206, 806, 1105
MalI GATC 8 cut(s) 168, 792, 825, 919, 1050, 1196, 1972, 2382
MbiI CCGCTC 1 cut(s) 593
MboI GATC 8 cut(s) 166, 790, 823, 917, 1048, 1194, 1970, 2380
MfeI CAATTG 1 cut(s) 888
MflI RGATCY 5 cut(s) 166, 823, 917, 1194, 1970
MhlI GDGCHC 4 cut(s) 203, 435, 609, 2241
MmeI TCCRAC 3 cut(s) 678, 2202, 2388
Mph1103I ATGCAT 2 cut(s) 103, 1516
MroI TCCGGA 2 cut(s) 737, 1053
MroXI GAANNNNTTC 6 cut(s) 733, 1275, 1481, 1580, 2134, 2154
MseI TTAA 7 cut(s) 338, 510, 524, 752, 1517, 1644, 2318
MslI CAYNNNNRTG 2 cut(s) 1509, 2149
MspA1I CMGCKG 2 cut(s) 558, 1685
MspCI CTTAAG 1 cut(s) 337
MspI CCGG 8 cut(s) 135, 189, 204, 738, 799, 1054, 2209, 2264
MspR9I CCNGG 4 cut(s) 136, 239, 1864, 2265
MunI CAATTG 1 cut(s) 888
Mva1269I GAATGC 1 cut(s) 1147
MvaI CCWGG 2 cut(s) 239, 1864
MvnI CGCG 1 cut(s) 519
MwoI GCNNNNNNNGC 4 cut(s) 107, 250, 430, 1520
NciI CCSGG 2 cut(s) 136, 2265
NdeI CATATG 2 cut(s) 537, 1594
NdeII GATC 8 cut(s) 166, 790, 823, 917, 1048, 1194, 1970, 2380
NheI GCTAGC 1 cut(s) 1145
NmuCI GTSAC 2 cut(s) 206, 1105
NsbI TGCGCA 1 cut(s) 671
NsiI ATGCAT 2 cut(s) 103, 1516
NspI RCATGY 2 cut(s) 236, 1514
PaeI GCATGC 1 cut(s) 1514
PaeR7I CTCGAG 1 cut(s) 2240
PaqCI CACCTGC 1 cut(s) 2068
PciSI GCTCTTC 1 cut(s) 600
PctI GAATGC 1 cut(s) 1147
PdmI GAANNNNTTC 6 cut(s) 733, 1275, 1481, 1580, 2134, 2154
PfeI GAWTC 7 cut(s) 131, 262, 712, 835, 1090, 1205, 1576
PflMI CCANNNNNTGG 1 cut(s) 863
PfoI TCCNGGA 2 cut(s) 134, 237
PkrI GCNGC 4 cut(s) 246, 521, 560, 1684
Ppu21I YACGTR 2 cut(s) 455, 806
PpuMI RGGWCCY 2 cut(s) 1622, 2344
PshAI GACNNNNGTC 1 cut(s) 1792
PsiI TTATAA 2 cut(s) 1691, 1917
Psp124BI GAGCTC 2 cut(s) 435, 2241
Psp1406I AACGTT 1 cut(s) 275
Psp5II RGGWCCY 2 cut(s) 1622, 2344
Psp6I CCWGG 2 cut(s) 237, 1862
PspFI CCCAGC 1 cut(s) 1618
PspGI CCWGG 2 cut(s) 237, 1862
PspPPI RGGWCCY 2 cut(s) 1622, 2344
PstI CTGCAG 1 cut(s) 770
PstNI CAGNNNCTG 2 cut(s) 244, 765
PsuI RGATCY 5 cut(s) 166, 823, 917, 1194, 1970
PvuII CAGCTG 1 cut(s) 1685
RsaI GTAC 1 cut(s) 1027
RsaNI GTAC 1 cut(s) 1026
RseI CAYNNNNRTG 2 cut(s) 1509, 2149
SacI GAGCTC 2 cut(s) 435, 2241
SapI GCTCTTC 1 cut(s) 600
SaqAI TTAA 7 cut(s) 338, 510, 524, 752, 1517, 1644, 2318
SatI GCNGC 4 cut(s) 245, 520, 559, 1683
Sau3AI GATC 8 cut(s) 166, 790, 823, 917, 1048, 1194, 1970, 2380
ScrFI CCNGG 4 cut(s) 136, 239, 1864, 2265
SduI GDGCHC 4 cut(s) 203, 435, 609, 2241
SfaNI GCATC 6 cut(s) 88, 1316, 1458, 1557, 1742, 1889
SfcI CTRYAG 3 cut(s) 766, 1944, 1976
Sfr274I CTCGAG 1 cut(s) 2240
SinI GGWCC 6 cut(s) 186, 848, 1361, 1589, 1622, 2344
SlaI CTCGAG 1 cut(s) 2240
SmiMI CAYNNNNRTG 2 cut(s) 1509, 2149
SmlI CTYRAG 2 cut(s) 337, 2240
SmoI CTYRAG 2 cut(s) 337, 2240
SnaBI TACGTA 2 cut(s) 455, 806
SphI GCATGC 1 cut(s) 1514
SsiI CCGC 5 cut(s) 65, 519, 558, 591, 915
SspMI CTAG 6 cut(s) 59, 821, 1035, 1146, 1395, 1856
SstI GAGCTC 2 cut(s) 435, 2241
StyD4I CCNGG 4 cut(s) 134, 237, 1862, 2263
TaaI ACNGT 3 cut(s) 989, 1732, 2060
TaiI ACGT 5 cut(s) 213, 278, 457, 808, 2370
TaqI TCGA 6 cut(s) 684, 1605, 2032, 2216, 2241, 2330
TaqII GACCGA 2 cut(s) 865, 2015
TatI WGTACW 1 cut(s) 1025
TauI GCSGC 2 cut(s) 522, 561
TfiI GAWTC 7 cut(s) 131, 262, 712, 835, 1090, 1205, 1576
Tru1I TTAA 7 cut(s) 338, 510, 524, 752, 1517, 1644, 2318
Tru9I TTAA 7 cut(s) 338, 510, 524, 752, 1517, 1644, 2318
TscAI CASTG 4 cut(s) 117, 1260, 2311, 2395
TseFI GTSAC 2 cut(s) 206, 1105
TseI GCWGC 2 cut(s) 244, 1682
Tsp45I GTSAC 2 cut(s) 206, 1105
TspDTI ATGAA 5 cut(s) 313, 554, 590, 1284, 2313
TspGWI ACGGA 1 cut(s) 1480
TspRI CASTG 4 cut(s) 117, 1260, 2311, 2395
Van91I CCANNNNNTGG 1 cut(s) 863
Vha464I CTTAAG 1 cut(s) 337
VpaK11BI GGWCC 6 cut(s) 186, 848, 1361, 1589, 1622, 2344
XagI CCTNNNNNAGG 2 cut(s) 1241, 1667
XapI RAATTY 4 cut(s) 564, 1213, 1565, 1991
XbaI TCTAGA 1 cut(s) 820
XceI RCATGY 2 cut(s) 236, 1514
XhoI CTCGAG 1 cut(s) 2240
XmiI GTMKAC 1 cut(s) 457
XmnI GAANNNNTTC 6 cut(s) 733, 1275, 1481, 1580, 2134, 2154
XspI CTAG 6 cut(s) 59, 821, 1035, 1146, 1395, 1856
Zsp2I ATGCAT 2 cut(s) 103, 1516
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.