Rroxscaffold_6G00419890
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0002297
Physical Location & Seq
Forward (+)
41243736 .. 41256228
12493 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00419890.1

Sequence Viewer

Length: 2601 bp
ATGAATCTCTCAGGAACTTTAGCGCCTGAGCTTGGCAAACTTTCTCAACTTCTGATATTAGATTTCATGTGGAATGACTTAAGTGGGACTATACCGAAGGAGATAGGAAACATTACGTCCTTGAAACTCTTGCTCTTGAATGGAAACAAACTATCGGGTTCCTTGCCTGATGAGCTCGGTTATCTTTTAAATCTAAATAGACTACAAGTTGACCAGAACCAACTTTCAGGTTCAATACCAAAATCATTTGTTAACTTGCGCAGCGTAAGACACCTCCATATGAACAACAACTCCTTCAGTGGCCAAATTCCATCTGAGATTTCTGAAATACCCGCTCTTCTTCATGTGCTCTTAGATAATAATAAATTATCTGGATATCTTCCACCAGAATTCTCCAACATACCAGGGTTGCGCATACTTCAACTTGATAACAACAACTTCACGGGAACTGAGATTCCAGCTACTTATGGGAACCTTTCCAGATTGGCAAAGTTAAGTCTCAGGAACTGCAGTCTGCAGGGAGCAATTCCTGATCTTAGCCGGATACCTAACCTCAGTTATCTAGATCTAAGCTGGAATCATCTTGCTGGACCAATACCATCACATGGACTTTCTGACAATATGACAACAATTGATCTGTCAGATAATCATCTTAACGGATCTATTCCTGAAGGTTTCTCTCATTTTCCTCATCTCCAGAAATTGTCGCTCGAAAATAATTGGCTGAATGGTTCTGTCCCTGCTATATGGAGGAACATATCCTTTAGTACAAGAGCTAGACTTTCATTTGATCTCCGGAACAATTCACTCTCTAACATATTGGGAGAGCTGAATCCTCCAGCAAATGTCACCTTGAGGCTTGAAGGAAATCCTATTTGCGAGAATGCTAGCATAGAAAATATAAGCCCATTCTGTCAATCTGAAGCGAGAGATGGGATCCCCGAGGATTCAATAAATTCAACTCAACAGATGACCTGCCCTATTCAAGCATGTCCGCTGGATGATTTCTATGAATATGCTCCATCTTCCCCTGTGCCATGCTTTTGTGCATCACCTATTATAGTTGAATATCGTCTGAAAAGCCCGAGCTTTTCTTACTTTCCTCCATATATACAGCAGTTTGGAGAGTATTTAACTAGGTCTCTAAAATTGGAGATTTACCAGTTATCAATTAGTTCCTTCATCTGGGAAAAAGGGCCTCGTTTATGGATGCAGTTGAAGTTCTTCCCTGTGTATGGTGCTTCACACTTGCATACATTAAATGCAAGTGAGGTTCTGCGAATTAGAGGCATCTTTACATCATGGGAATTTCCTCAGAATGATTTCTTTGGACCATATGAGCTACTTGACTTCAAACTGCTGGGACCTTATTCAAATGTGATTGTTAAGAGACAAAAGATGGGCATCAGTAAGGGTGTATTAGCAGCTGTTATAATAGGGGCCATTGCTTCTGTTGTCAGTATATCTGCAACAGTCATGCTTCTGTTCACAAGATGCACCCGAAACCGACACACACTACCTTCAAGGAGACACTCATCGTTGAAGATTTCTATGAGAATTGAAGGTGTAAAGGCGTTCACTTTCAAAGAAATGACACTAGCCACCAGGAACTTTGATAGTGCAACTCAACTTGGACGAGGAGGCTATGGGAAAGTTTATAAAGGTATCTTATCTGATAACACAGCTGTAGCCATAAAACGTGCAGAAGCAGGATCCCTACAGGGTGAAAAAGAATTCTTGACCGAGATAGAATTATTATCAAGGCTACACCATCGAAACTTAGTCTCTTTGGTAGGATACTGTGAAGAAGAAGGGGAGCAGATGTTGGTTTATGAATTCATGCCTAATGGTACCTTACGTGACTGGCTTTCTGATAAAACCAAGGGAAGCCTGGACTTCAGTATGAGATTACGTATTGCATTGGGTTCAGCCAAAGGAATTCTTTATCTCCATACCGAGGCAAATCCTCCTATATTCCACCGAGATATTAAAGCCACAAATATACTTCTGGACTCCAACTATATCGCTAAGGTGGCCGATTTTGGACTCTCACGACTAGCACCTGTCCAGAATGATGAAGGGACTGGCCCTGCATACGTATCTACAGTCGTGAGAGGAACACCGGGCTACCTGGATCCAGAGTATTTCTTGACCAGTAAGTTAACAGACAAAAGCGATGTCTATAGCCTTGGAATTGTGTTTCTGGAGCTCTTGACTGGTGTGCTGCCAATATCACATGGCAAAAACATTGTTCGCGAGGTGAATATGGCTCATCAGTCAGGCTTGATGTTCTCCATTATAGATAGCAGAATAGGTTCGTATCCATCTGAATGTGTTCAGAGGTTTGTAGCTTTGGCCCTCAGATGTTGCCATGATAAACAAGACGACCGGCCATCAATGCTGGATGTGGTGAGGGAGCTCGAGAACATAATCAAACTTATGCCGGGAGCTGAAACAATGTTTTCACCATCTGGTCCCTCATACACTGAAAAATCATTAACTTCATCATCGACTTTTACTGGGGACCCATATATGTCCTCCTCCAACGTCGAAGGAAGTGATCTAACCAGTGGTGTAATCCCTACCATCTCGCCTCGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

866

Amino Acids

96.05

Weight (kDa)

6.37

Isoelectric Point (pI)

41.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 10 - 95 1.8e-06 Leucine-rich repeat region
LRR_14 PF23598 82 - 266 8.1e-07 Leucine-rich repeat region
Pkinase PF00069 540 - 805 5.5e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 542 - 807 5.8e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1433, 1659
Acc16I TGCGCA 2 cut(s) 260, 413
Acc36I ACCTGC 1 cut(s) 983
Acc65I GGTACC 1 cut(s) 1850
AccB1I GGYRCC 1 cut(s) 1850
AccB7I CCANNNNNTGG 1 cut(s) 605
AccBSI CCGCTC 1 cut(s) 335
AccII CGCG 1 cut(s) 2256
AccIII TCCGGA 1 cut(s) 795
AciI CCGC 2 cut(s) 333, 995
AclWI GGATC 7 cut(s) 667, 931, 944, 1707, 1720, 2129, 2142
AcoI YGGCCR 3 cut(s) 301, 2034, 2390
AcsI RAATTY 7 cut(s) 306, 389, 955, 1307, 1733, 1835, 1938
AcuI CTGAAG 4 cut(s) 280, 690, 942, 1882
AfaI GTAC 2 cut(s) 769, 1852
AfiI CCNNNNNNNGG 5 cut(s) 32, 605, 1185, 1235, 1957
AflII CTTAAG 1 cut(s) 79
AjnI CCWGG 4 cut(s) 403, 1604, 1890, 2130
AloI GAACNNNNNNTCC 4 cut(s) 275, 307, 439, 471
Alw21I GWGCWC 4 cut(s) 177, 351, 2211, 2421
Alw26I GTCTC 5 cut(s) 503, 1146, 1384, 1522, 1789
AlwI GGATC 7 cut(s) 667, 931, 944, 1707, 1720, 2129, 2142
AlwNI CAGNNNCTG 1 cut(s) 507
Ama87I CYCGRG 3 cut(s) 941, 1084, 2420
Aor13HI TCCGGA 1 cut(s) 795
AoxI GGCC 7 cut(s) 301, 1196, 1440, 2034, 2086, 2355, 2390
ApeKI GCWGC 3 cut(s) 261, 1424, 2224
ApoI RAATTY 7 cut(s) 306, 389, 955, 1307, 1733, 1835, 1938
ArsI GACNNNNNNTTYG 2 cut(s) 2163, 2195
Asp700I GAANNNNTTC 4 cut(s) 1223, 1322, 2314, 2334
Asp718I GGTACC 1 cut(s) 1850
AspLEI GCGC 3 cut(s) 25, 261, 414
AspS9I GGNCC 9 cut(s) 590, 1196, 1331, 1364, 1440, 2087, 2356, 2474, 2524
AsuC2I CCSGG 2 cut(s) 2124, 2445
AsuHPI GGTGA 6 cut(s) 841, 1044, 1736, 2272, 2422, 2457
AsuNHI GCTAGC 1 cut(s) 887
AvaI CYCGRG 3 cut(s) 941, 1084, 2420
AvaII GGWCC 5 cut(s) 590, 1331, 1364, 2474, 2524
BalI TGGCCA 1 cut(s) 303
BamHI GGATCC 3 cut(s) 936, 1712, 2134
BanI GGYRCC 1 cut(s) 1850
BanII GRGCYC 3 cut(s) 177, 2211, 2421
Bbv12I GWGCWC 4 cut(s) 177, 351, 2211, 2421
BbvI GCAGC 3 cut(s) 273, 1436, 2211
BciT130I CCWGG 4 cut(s) 405, 1606, 1892, 2132
BciVI GTATCC 3 cut(s) 537, 1790, 2331
BcnI CCSGG 2 cut(s) 2124, 2445
BcoDI GTCTC 5 cut(s) 503, 1146, 1384, 1522, 1789
BfaI CTAG 6 cut(s) 563, 777, 888, 1137, 1598, 2057
BfmI CTRYAG 6 cut(s) 508, 515, 1686, 1718, 2103, 2182
BfoI RGCGCY 1 cut(s) 26
BfrI CTTAAG 1 cut(s) 79
BfuAI ACCTGC 1 cut(s) 983
BfuI GTATCC 3 cut(s) 537, 1790, 2331
BglII AGATCT 1 cut(s) 565
BisI GCNGC 3 cut(s) 262, 1425, 2225
BlsI GCNGC 3 cut(s) 263, 1426, 2226
Bme1390I CCNGG 6 cut(s) 405, 1606, 1892, 2124, 2132, 2445
Bme18I GGWCC 5 cut(s) 590, 1331, 1364, 2474, 2524
BmeT110I CYCGRG 3 cut(s) 941, 1084, 2420
BmgT120I GGNCC 9 cut(s) 590, 1196, 1331, 1364, 1440, 2087, 2356, 2474, 2524
BmrFI CCNGG 6 cut(s) 405, 1606, 1892, 2124, 2132, 2445
BmrI ACTGGG 1 cut(s) 2529
BmsI GCATC 5 cut(s) 1058, 1200, 1299, 1413, 1484
BmtI GCTAGC 1 cut(s) 891
BmuI ACTGGG 1 cut(s) 2529
BpmI CTGGAG 3 cut(s) 680, 822, 2225
Bpu10I CCTNAGC 2 cut(s) 27, 2028
BpuEI CTTGAG 1 cut(s) 874
BpuMI CCSGG 2 cut(s) 2124, 2445
BsaAI YACGTR 3 cut(s) 1859, 1913, 2098
BsaBI GATNNNNATC 2 cut(s) 648, 1403
BsaI GGTCTC 1 cut(s) 1146
BsaJI CCNNGG 6 cut(s) 404, 942, 1881, 1956, 2188, 2594
BsaWI WCCGGW 1 cut(s) 795
BsaXI ACNNNNNCTCC 4 cut(s) 275, 305, 1808, 1838
Bsc4I CCNNNNNNNGG 5 cut(s) 32, 605, 1185, 1235, 1957
Bse118I RCCGGY 1 cut(s) 2388
Bse1I ACTGG 7 cut(s) 1162, 1868, 2089, 2154, 2221, 2524, 2568
Bse3DI GCAATG 1 cut(s) 1443
Bse8I GATNNNNATC 2 cut(s) 648, 1403
BseAI TCCGGA 1 cut(s) 795
BseBI CCWGG 4 cut(s) 405, 1606, 1892, 2132
BseDI CCNNGG 6 cut(s) 404, 942, 1881, 1956, 2188, 2594
BseGI GGATG 3 cut(s) 1006, 1215, 2410
BseJI GATNNNNATC 2 cut(s) 648, 1403
BseLI CCNNNNNNNGG 5 cut(s) 32, 605, 1185, 1235, 1957
BseMI GCAATG 1 cut(s) 1443
BseMII CTCAG 8 cut(s) 18, 24, 306, 441, 514, 568, 1328, 2374
BseNI ACTGG 7 cut(s) 1162, 1868, 2089, 2154, 2221, 2524, 2568
BseRI GAGGAG 2 cut(s) 1653, 2530
BseXI GCAGC 3 cut(s) 273, 1436, 2211
BseYI CCCAGC 1 cut(s) 1360
BsgI GTGCAG 1 cut(s) 1722
Bsh1236I CGCG 1 cut(s) 2256
Bsh1285I CGRYCG 1 cut(s) 2389
BshFI GGCC 7 cut(s) 303, 1198, 1442, 2036, 2088, 2357, 2392
BshNI GGYRCC 1 cut(s) 1850
BsiEI CGRYCG 1 cut(s) 2389
BsiHKAI GWGCWC 4 cut(s) 177, 351, 2211, 2421
BsiHKCI CYCGRG 3 cut(s) 941, 1084, 2420
BsiSI CCGG 5 cut(s) 541, 796, 2123, 2389, 2444
BslFI GGGAC 6 cut(s) 100, 722, 1377, 2095, 2460, 2537
BslI CCNNNNNNNGG 5 cut(s) 32, 605, 1185, 1235, 1957
BsmAI GTCTC 5 cut(s) 503, 1146, 1384, 1522, 1789
BsmFI GGGAC 6 cut(s) 100, 722, 1377, 2095, 2460, 2537
BsmI GAATGC 1 cut(s) 889
BsnI GGCC 7 cut(s) 303, 1198, 1442, 2036, 2088, 2357, 2392
Bso31I GGTCTC 1 cut(s) 1146
BsoBI CYCGRG 3 cut(s) 941, 1084, 2420
Bsp1286I GDGCHC 4 cut(s) 177, 351, 2211, 2421
Bsp13I TCCGGA 1 cut(s) 795
Bsp143I GATC 9 cut(s) 532, 565, 634, 659, 790, 936, 1712, 2134, 2560
Bsp68I TCGCGA 1 cut(s) 2256
BspACI CCGC 2 cut(s) 333, 995
BspANI GGCC 7 cut(s) 303, 1198, 1442, 2036, 2088, 2357, 2392
BspCNI CTCAG 8 cut(s) 19, 23, 307, 442, 513, 567, 1327, 2373
BspEI TCCGGA 1 cut(s) 795
BspFNI CGCG 1 cut(s) 2256
BspMAI CTGCAG 2 cut(s) 512, 519
BspMI ACCTGC 1 cut(s) 983
BspOI GCTAGC 1 cut(s) 891
BspPI GGATC 7 cut(s) 667, 931, 944, 1707, 1720, 2129, 2142
BspQI GCTCTTC 1 cut(s) 342
BspT107I GGYRCC 1 cut(s) 1850
BspTI CTTAAG 1 cut(s) 79
BspTNI GGTCTC 1 cut(s) 1146
BsrBI CCGCTC 1 cut(s) 335
BsrDI GCAATG 1 cut(s) 1443
BsrFI RCCGGY 1 cut(s) 2388
BsrI ACTGG 7 cut(s) 1162, 1868, 2089, 2154, 2221, 2524, 2568
BssAI RCCGGY 1 cut(s) 2388
BssECI CCNNGG 6 cut(s) 404, 942, 1881, 1956, 2188, 2594
BssMI GATC 9 cut(s) 532, 565, 634, 659, 790, 936, 1712, 2134, 2560
BssT1I CCWWGG 2 cut(s) 1881, 2188
Bst2UI CCWGG 4 cut(s) 405, 1606, 1892, 2132
Bst4CI ACNGT 3 cut(s) 1474, 1802, 2107
Bst6I CTCTTC 1 cut(s) 342
BstAFI CTTAAG 1 cut(s) 79
BstBAI YACGTR 3 cut(s) 1859, 1913, 2098
BstC8I GCNNGC 1 cut(s) 889
BstF5I GGATG 3 cut(s) 1006, 1215, 2410
BstFNI CGCG 1 cut(s) 2256
BstH2I RGCGCY 1 cut(s) 26
BstHHI GCGC 3 cut(s) 25, 261, 414
BstKTI GATC 9 cut(s) 535, 568, 637, 662, 793, 939, 1715, 2137, 2563
BstMAI GTCTC 5 cut(s) 503, 1146, 1384, 1522, 1789
BstMBI GATC 9 cut(s) 532, 565, 634, 659, 790, 936, 1712, 2134, 2560
BstMCI CGRYCG 1 cut(s) 2389
BstMWI GCNNNNNNNGC 3 cut(s) 172, 2033, 2398
BstNI CCWGG 4 cut(s) 405, 1606, 1892, 2132
BstNSI RCATGY 1 cut(s) 993
BstSCI CCNGG 6 cut(s) 403, 1604, 1890, 2122, 2130, 2443
BstSFI CTRYAG 6 cut(s) 508, 515, 1686, 1718, 2103, 2182
BstSNI TACGTA 2 cut(s) 1913, 2098
BstUI CGCG 1 cut(s) 2256
BstV1I GCAGC 3 cut(s) 273, 1436, 2211
BstX2I RGATCY 5 cut(s) 565, 659, 936, 1712, 2134
BstYI RGATCY 5 cut(s) 565, 659, 936, 1712, 2134
BsuI GTATCC 3 cut(s) 537, 1790, 2331
BsuRI GGCC 7 cut(s) 303, 1198, 1442, 2036, 2088, 2357, 2392
BtgZI GCGATG 1 cut(s) 2190
BtsCI GGATG 3 cut(s) 1006, 1215, 2410
BtsIMutI CAGTG 3 cut(s) 304, 2484, 2575
BtuMI TCGCGA 1 cut(s) 2256
BveI ACCTGC 1 cut(s) 983
Cac8I GCNNGC 1 cut(s) 889
CaiI CAGNNNCTG 1 cut(s) 507
CfoI GCGC 3 cut(s) 25, 261, 414
Cfr10I RCCGGY 1 cut(s) 2388
Cfr13I GGNCC 9 cut(s) 590, 1196, 1331, 1364, 1440, 2087, 2356, 2474, 2524
Csp6I GTAC 2 cut(s) 768, 1851
CviQI GTAC 2 cut(s) 768, 1851
DpnI GATC 9 cut(s) 534, 567, 636, 661, 792, 938, 1714, 2136, 2562
DpnII GATC 9 cut(s) 532, 565, 634, 659, 790, 936, 1712, 2134, 2560
DraI TTTAAA 1 cut(s) 189
EaeI YGGCCR 3 cut(s) 301, 2034, 2390
Eam1104I CTCTTC 1 cut(s) 342
EarI CTCTTC 1 cut(s) 342
Ecl136II GAGCTC 3 cut(s) 175, 2209, 2419
Eco105I TACGTA 2 cut(s) 1913, 2098
Eco130I CCWWGG 2 cut(s) 1881, 2188
Eco24I GRGCYC 3 cut(s) 177, 2211, 2421
Eco31I GGTCTC 1 cut(s) 1146
Eco32I GATATC 1 cut(s) 377
Eco47I GGWCC 5 cut(s) 590, 1331, 1364, 2474, 2524
Eco53kI GAGCTC 3 cut(s) 175, 2209, 2419
Eco57I CTGAAG 4 cut(s) 280, 690, 942, 1882
Eco88I CYCGRG 3 cut(s) 941, 1084, 2420
EcoICRI GAGCTC 3 cut(s) 175, 2209, 2419
EcoO109I RGGNCCY 3 cut(s) 1196, 1364, 2524
EcoRI GAATTC 4 cut(s) 389, 1733, 1835, 1938
EcoRII CCWGG 4 cut(s) 403, 1604, 1890, 2130
EcoRV GATATC 1 cut(s) 377
EcoT14I CCWWGG 2 cut(s) 1881, 2188
EcoT38I GRGCYC 3 cut(s) 177, 2211, 2421
ErhI CCWWGG 2 cut(s) 1881, 2188
FalI AAGNNNNNCTT 2 cut(s) 1926, 1958
FaqI GGGAC 6 cut(s) 100, 722, 1377, 2095, 2460, 2537
FauI CCCGC 1 cut(s) 340
FauNDI CATATG 2 cut(s) 279, 1336
Fnu4HI GCNGC 3 cut(s) 262, 1425, 2225
FokI GGATG 3 cut(s) 1013, 1222, 2417
FriOI GRGCYC 3 cut(s) 177, 2211, 2421
Fsp4HI GCNGC 3 cut(s) 262, 1425, 2225
FspBI CTAG 6 cut(s) 563, 777, 888, 1137, 1598, 2057
FspI TGCGCA 2 cut(s) 260, 413
GlaI GCGC 3 cut(s) 24, 260, 413
GluI GCNGC 3 cut(s) 262, 1425, 2225
GsaI CCCAGC 1 cut(s) 1364
GsuI CTGGAG 3 cut(s) 680, 822, 2225
HaeII RGCGCY 1 cut(s) 26
HaeIII GGCC 7 cut(s) 303, 1198, 1442, 2036, 2088, 2357, 2392
HapII CCGG 5 cut(s) 541, 796, 2123, 2389, 2444
HhaI GCGC 3 cut(s) 25, 261, 414
Hin6I GCGC 3 cut(s) 23, 259, 412
HinP1I GCGC 3 cut(s) 23, 259, 412
HincII GTYRAC 3 cut(s) 211, 253, 2163
HindII GTYRAC 3 cut(s) 211, 253, 2163
HinfI GANTC 7 cut(s) 4, 454, 577, 832, 947, 2012, 2046
HpaI GTTAAC 2 cut(s) 253, 2163
HpaII CCGG 5 cut(s) 541, 796, 2123, 2389, 2444
HphI GGTGA 6 cut(s) 841, 1044, 1736, 2272, 2422, 2457
Hpy166II GTNNAC 5 cut(s) 211, 253, 1488, 1578, 2163
Hpy8I GTNNAC 5 cut(s) 211, 253, 1488, 1578, 2163
Hpy99I CGWCG 1 cut(s) 2552
HpyCH4III ACNGT 3 cut(s) 1474, 1802, 2107
HpyCH4IV ACGT 6 cut(s) 116, 1699, 1858, 1912, 2097, 2547
HpyF10VI GCNNNNNNNGC 3 cut(s) 172, 2033, 2398
HpySE526I ACGT 6 cut(s) 116, 1699, 1858, 1912, 2097, 2547
HspAI GCGC 3 cut(s) 23, 259, 412
KflI GGGWCCC 1 cut(s) 2524
Kpn2I TCCGGA 1 cut(s) 795
KpnI GGTACC 1 cut(s) 1854
KspAI GTTAAC 2 cut(s) 253, 2163
Kzo9I GATC 9 cut(s) 532, 565, 634, 659, 790, 936, 1712, 2134, 2560
LguI GCTCTTC 1 cut(s) 342
LmnI GCTCC 6 cut(s) 521, 1024, 1816, 2206, 2416, 2447
Lsp1109I GCAGC 3 cut(s) 273, 1436, 2211
LweI GCATC 5 cut(s) 1058, 1200, 1299, 1413, 1484
MaeI CTAG 6 cut(s) 563, 777, 888, 1137, 1598, 2057
MaeII ACGT 6 cut(s) 116, 1699, 1858, 1912, 2097, 2547
MaeIII GTNAC 2 cut(s) 847, 1859
MalI GATC 9 cut(s) 534, 567, 636, 661, 792, 938, 1714, 2136, 2562
MbiI CCGCTC 1 cut(s) 335
MboI GATC 9 cut(s) 532, 565, 634, 659, 790, 936, 1712, 2134, 2560
MboII GAAGA 8 cut(s) 329, 332, 371, 1017, 1216, 1555, 1817, 1820
MfeI CAATTG 1 cut(s) 630
MflI RGATCY 5 cut(s) 565, 659, 936, 1712, 2134
MhlI GDGCHC 4 cut(s) 177, 351, 2211, 2421
MlsI TGGCCA 1 cut(s) 303
MluNI TGGCCA 1 cut(s) 303
MlyI GAGTC 2 cut(s) 2006, 2040
MmeI TCCRAC 3 cut(s) 420, 2040, 2568
Mox20I TGGCCA 1 cut(s) 303
MroI TCCGGA 1 cut(s) 795
MroXI GAANNNNTTC 4 cut(s) 1223, 1322, 2314, 2334
MscI TGGCCA 1 cut(s) 303
MslI CAYNNNNRTG 1 cut(s) 2329
Msp20I TGGCCA 1 cut(s) 303
MspA1I CMGCKG 3 cut(s) 997, 1427, 1685
MspCI CTTAAG 1 cut(s) 79
MspI CCGG 5 cut(s) 541, 796, 2123, 2389, 2444
MspR9I CCNGG 6 cut(s) 405, 1606, 1892, 2124, 2132, 2445
MunI CAATTG 1 cut(s) 630
Mva1269I GAATGC 1 cut(s) 889
MvaI CCWGG 4 cut(s) 405, 1606, 1892, 2132
MvnI CGCG 1 cut(s) 2256
MwoI GCNNNNNNNGC 3 cut(s) 172, 2033, 2398
NciI CCSGG 2 cut(s) 2124, 2445
NdeI CATATG 2 cut(s) 279, 1336
NdeII GATC 9 cut(s) 532, 565, 634, 659, 790, 936, 1712, 2134, 2560
NheI GCTAGC 1 cut(s) 887
NmuCI GTSAC 2 cut(s) 847, 1859
NruI TCGCGA 1 cut(s) 2256
NsbI TGCGCA 2 cut(s) 260, 413
NspI RCATGY 1 cut(s) 993
PaeR7I CTCGAG 1 cut(s) 2420
PciSI GCTCTTC 1 cut(s) 342
PctI GAATGC 1 cut(s) 889
PdmI GAANNNNTTC 4 cut(s) 1223, 1322, 2314, 2334
PfeI GAWTC 5 cut(s) 4, 454, 577, 832, 947
PflMI CCANNNNNTGG 1 cut(s) 605
PkrI GCNGC 3 cut(s) 263, 1426, 2226
PleI GAGTC 2 cut(s) 2006, 2040
PpsI GAGTC 2 cut(s) 2006, 2040
Ppu21I YACGTR 3 cut(s) 1859, 1913, 2098
PpuMI RGGWCCY 2 cut(s) 1364, 2524
PsiI TTATAA 2 cut(s) 1433, 1659
Psp124BI GAGCTC 3 cut(s) 177, 2211, 2421
Psp5II RGGWCCY 2 cut(s) 1364, 2524
Psp6I CCWGG 4 cut(s) 403, 1604, 1890, 2130
PspFI CCCAGC 1 cut(s) 1360
PspGI CCWGG 4 cut(s) 403, 1604, 1890, 2130
PspPI GGNCC 9 cut(s) 590, 1196, 1331, 1364, 1440, 2087, 2356, 2474, 2524
PspPPI RGGWCCY 2 cut(s) 1364, 2524
PstI CTGCAG 2 cut(s) 512, 519
PstNI CAGNNNCTG 1 cut(s) 507
PsuI RGATCY 5 cut(s) 565, 659, 936, 1712, 2134
PvuII CAGCTG 2 cut(s) 1427, 1685
RruI TCGCGA 1 cut(s) 2256
RsaI GTAC 2 cut(s) 769, 1852
RsaNI GTAC 2 cut(s) 768, 1851
RseI CAYNNNNRTG 1 cut(s) 2329
SacI GAGCTC 3 cut(s) 177, 2211, 2421
SapI GCTCTTC 1 cut(s) 342
SatI GCNGC 3 cut(s) 262, 1425, 2225
Sau3AI GATC 9 cut(s) 532, 565, 634, 659, 790, 936, 1712, 2134, 2560
Sau96I GGNCC 9 cut(s) 590, 1196, 1331, 1364, 1440, 2087, 2356, 2474, 2524
SchI GAGTC 2 cut(s) 2006, 2040
ScrFI CCNGG 6 cut(s) 405, 1606, 1892, 2124, 2132, 2445
SduI GDGCHC 4 cut(s) 177, 351, 2211, 2421
SfaNI GCATC 5 cut(s) 1058, 1200, 1299, 1413, 1484
SfcI CTRYAG 6 cut(s) 508, 515, 1686, 1718, 2103, 2182
Sfr274I CTCGAG 1 cut(s) 2420
SinI GGWCC 5 cut(s) 590, 1331, 1364, 2474, 2524
SlaI CTCGAG 1 cut(s) 2420
SmiMI CAYNNNNRTG 1 cut(s) 2329
SmlI CTYRAG 3 cut(s) 79, 853, 2420
SmoI CTYRAG 3 cut(s) 79, 853, 2420
SnaBI TACGTA 2 cut(s) 1913, 2098
SsiI CCGC 2 cut(s) 333, 995
SspMI CTAG 6 cut(s) 563, 777, 888, 1137, 1598, 2057
SstI GAGCTC 3 cut(s) 177, 2211, 2421
StyD4I CCNGG 6 cut(s) 403, 1604, 1890, 2122, 2130, 2443
StyI CCWWGG 2 cut(s) 1881, 2188
TaaI ACNGT 3 cut(s) 1474, 1802, 2107
TaiI ACGT 6 cut(s) 119, 1702, 1861, 1915, 2100, 2550
TaqI TCGA 5 cut(s) 711, 1774, 2421, 2510, 2550
TaqII GACCGA 1 cut(s) 1757
TatI WGTACW 1 cut(s) 767
TfiI GAWTC 5 cut(s) 4, 454, 577, 832, 947
TscAI CASTG 3 cut(s) 304, 2491, 2575
TseFI GTSAC 2 cut(s) 847, 1859
TseI GCWGC 3 cut(s) 261, 1424, 2224
Tsp45I GTSAC 2 cut(s) 847, 1859
TspGWI ACGGA 1 cut(s) 672
TspRI CASTG 3 cut(s) 304, 2491, 2575
Van91I CCANNNNNTGG 1 cut(s) 605
Vha464I CTTAAG 1 cut(s) 79
VpaK11BI GGWCC 5 cut(s) 590, 1331, 1364, 2474, 2524
XapI RAATTY 7 cut(s) 306, 389, 955, 1307, 1733, 1835, 1938
XbaI TCTAGA 1 cut(s) 562
XceI RCATGY 1 cut(s) 993
XcmI CCANNNNNNNNNTGG 1 cut(s) 1888
XhoI CTCGAG 1 cut(s) 2420
XmnI GAANNNNTTC 4 cut(s) 1223, 1322, 2314, 2334
XspI CTAG 6 cut(s) 563, 777, 888, 1137, 1598, 2057
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.