Rh3CG102400
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
OG0002297
Physical Location & Seq
Reverse (-)
8135142 .. 8142580
7439 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG102400.1

Sequence Viewer

Length: 2157 bp
ATGTTGAGACTGAGATTTTGGGGTTGCCTCATTGGTCTGGCTTGTTCTTGCTTCTTCCTAGTTGCGGTTGCACAAGTTACTAATCCTTCTGAAGTGGTTGCATTGAGAGCAGTGAAGGGTAGTTTGATTGATTCGAGGAAGCATTTGAGGAATTGGCACAAAGGGGATCCATGTAAAGCGAATTGGACCGGAGTTTTGTGTTCTGGTGATGTTGGGACTGATGGATACTTGCATGTCCAAGAGCTGCAACTGCTAAGTAAGAATCTCTCAGGATCTTTAGCGCCTGAGCTTGGCAAACTATCTCAACTTCTGATATTAGATTTCATGTGGAATAACTTAAGTGGGACTATACCGAAGGAGATAGGATACATTACGTCCTTGAAACTCTTGCTCTTGAATGGAAACAAACTATCGGGTTCCTTGCCTGATGAGCTCGGTTCTCTTGAAAATCTACATAGACTACAAGTTGACGAGAACCATCTTTCAGGTTCAATACCAAAATCATTTCATAACTTGCGCGGCTTAAAACACCTCCATATGAACAACAACTCCTTCAGTGGCCAAATTCCATCTGAGATTTCTGAAATACCCGCTCTTCTTCATGTGCTCTTGGATAATAATAACTTATCTGGATATCTTCCACCAGACTTCTCCAACATACCAGAGTTGCGCATACTTCAACTCGATAACAACAACTTCACAGGAACTGAGATTCCAGCTACTTATGGAAACCTTTCCGGATTGGCAAAGTTAAGTCTCAGGAACTGCAGTTTGCAGGGAGCAATTCCTGATCTTAGCCGGATACGTAACCTCAGTTATCTAGATCTAAGCTGGAATCATCTTACTGGACCGATACCATCACATGGGCTTTCTGACAATATGACAACAATTGTTCTGTCAGATAATCATCTTAGCGGATCTATTCCTGAAGGTTTCTCTCATTTTCCTCGTCTTCAGAAATTGTCGCTCAAAAATAATCAGTTGAACGGTTCTATCCCTGCTCTATGGAGGAACATATCTTTTAGTACAAGAGCTAGACTTTCATTTGATCTCCGGAACAATTCACTCTCTAACATATTGGGAGAGCTGAATCCTCCAGCAAATGTCACCTTGAGGCTTGAAGGAAATCCTATTTGCAAGAATGCTAGCATAGAAAATATAAGCCCGTTCTGTCAATCTGAAGCGAGCGATGGGATCCCCAAAGATTCAATAAATTCAACTCAACAGATGACCTGCCATATTCAGGAATGTCCAGTGGATGATTTCTATGAATATGTTCCATCTTCCCCTGTGCCATGCTTTTGTGCGTCACCTATTATAGTTGAATATCGTCTGAAAAGCCCGAGCTTTTCTTACTTTGGTCCATATATACAGCAGTTTGAAGAGTATATAACTAGGTCTCTAAAATTGGAGATTTACCAGTTATCAATTAGTTCCTTTGTCTGGGAAGAAGGGCCTCGTTTACTGATGCAGTTGAAGTTCTTCCCCGTGTATGGTGCTTCACAGTCGCATGCATTAAATGCAAGTGAGGTTCTGCGAATTAGAGGCATCTTTACATCATGGGAATTTTCTCAGAATCAATTCTTTGGACCATATGAGCTACTCGACTTCAAACTGCTGGGACCTTATTCAAATAATGCACCAGAAACCGATACACACTACCTTCAAGGAGACACTCGTGGCTACCTGGATCCAGAGTATATCTTGACCAGTAAGTTAACCGACAAAAGCGATGTCTATAGCCTTGGAATTGTGTTTCTGGAGCTCTTGACTGGTGTGCTGCCAATATCACATGGCAAAAACATTGTTCGCGAGGTGAATATGGCTCATCAGTCAGGCTTGATGTTCTCCATTATAGATAGCAGAATGGGTTCGTATCCATCTGAATGTGTTCAGAGGTTTGTAGCTTTGGCCCTCAGATGTTGCCATGATAAACAAGACGACCGGCCATCAATGTTGGATGTGGTGAGGGAGCTCGAGAACATAATCAAACTTATGCCGGGAGCTGAAACAATATTTTCACCATCTGGTTCCTCATACACTGAAAAATCATTAACTTCATCATCGACTTTTACTGGGGACCCATATATGTCCTCCTCCAACGTGGAAGGAAGTGATCTAATCAGTGGTGTAATCCCTACCATCTCGCCTCGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

718

Amino Acids

79.69

Weight (kDa)

5.83

Isoelectric Point (pI)

43.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 29 - 68 2.1e-08 Leucine rich repeat N-terminal domain
LRR_14 PF23598 88 - 181 2.9e-07 Leucine-rich repeat region
LRR_8 PF13855 150 - 209 4.6e-06 Leucine rich repeat
LRR_14 PF23598 167 - 334 2.2e-07 Leucine-rich repeat region
LRR_8 PF13855 221 - 281 7.5e-06 Leucine rich repeat
Pkinase PF00069 558 - 657 5e-11 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 562 - 659 2.4e-08 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 671
Acc36I ACCTGC 1 cut(s) 1241
AccB7I CCANNNNNTGG 1 cut(s) 863
AccBSI CCGCTC 1 cut(s) 593
AccII CGCG 2 cut(s) 519, 1812
AccIII TCCGGA 2 cut(s) 737, 1053
AciI CCGC 4 cut(s) 65, 519, 591, 915
AclWI GGATC 8 cut(s) 161, 174, 280, 925, 1189, 1202, 1685, 1698
AcoI YGGCCR 2 cut(s) 559, 1946
AcsI RAATTY 3 cut(s) 564, 1213, 1565
AcuI CTGAAG 5 cut(s) 111, 538, 938, 948, 1200
AfaI GTAC 1 cut(s) 1027
AfiI CCNNNNNNNGG 6 cut(s) 64, 290, 863, 1243, 1443, 1493
AflII CTTAAG 1 cut(s) 337
AjnI CCWGG 1 cut(s) 1686
AloI GAACNNNNNNTCC 4 cut(s) 533, 565, 697, 729
Alw21I GWGCWC 4 cut(s) 435, 609, 1767, 1977
Alw26I GTCTC 3 cut(s) 761, 1404, 1665
AlwI GGATC 8 cut(s) 161, 174, 280, 925, 1189, 1202, 1685, 1698
AlwNI CAGNNNCTG 2 cut(s) 707, 765
Ama87I CYCGRG 2 cut(s) 1342, 1976
Aor13HI TCCGGA 2 cut(s) 737, 1053
AoxI GGCC 4 cut(s) 559, 1454, 1911, 1946
ApeKI GCWGC 2 cut(s) 244, 1780
ApoI RAATTY 3 cut(s) 564, 1213, 1565
ArsI GACNNNNNNTTYG 5 cut(s) 32, 178, 210, 1719, 1751
Asp700I GAANNNNTTC 6 cut(s) 733, 1275, 1481, 1580, 1870, 1890
AspLEI GCGC 3 cut(s) 283, 519, 672
AspS9I GGNCC 8 cut(s) 186, 848, 1361, 1454, 1589, 1622, 1912, 2080
AsuC2I CCSGG 1 cut(s) 2001
AsuHPI GGTGA 6 cut(s) 218, 1099, 1302, 1828, 1978, 2013
AsuNHI GCTAGC 1 cut(s) 1145
AvaI CYCGRG 2 cut(s) 1342, 1976
AvaII GGWCC 6 cut(s) 186, 848, 1361, 1589, 1622, 2080
BalI TGGCCA 1 cut(s) 561
BamHI GGATCC 3 cut(s) 166, 1194, 1690
BanII GRGCYC 3 cut(s) 435, 1767, 1977
BauI CACGAG 1 cut(s) 1677
BbsI GAAGAC 1 cut(s) 944
Bbv12I GWGCWC 4 cut(s) 435, 609, 1767, 1977
BbvI GCAGC 2 cut(s) 231, 1767
BciT130I CCWGG 1 cut(s) 1688
BciVI GTATCC 4 cut(s) 218, 359, 795, 1887
BcnI CCSGG 1 cut(s) 2001
BcoDI GTCTC 3 cut(s) 761, 1404, 1665
BfaI CTAG 5 cut(s) 59, 821, 1035, 1146, 1395
BfmI CTRYAG 2 cut(s) 766, 1738
BfoI RGCGCY 1 cut(s) 284
BfrI CTTAAG 1 cut(s) 337
BfuAI ACCTGC 1 cut(s) 1241
BfuI GTATCC 4 cut(s) 218, 359, 795, 1887
BglII AGATCT 1 cut(s) 823
BisI GCNGC 3 cut(s) 245, 520, 1781
BlsI GCNGC 3 cut(s) 246, 521, 1782
Bme1390I CCNGG 2 cut(s) 1688, 2001
Bme18I GGWCC 6 cut(s) 186, 848, 1361, 1589, 1622, 2080
BmeT110I CYCGRG 2 cut(s) 1342, 1976
BmgT120I GGNCC 8 cut(s) 186, 848, 1361, 1454, 1589, 1622, 1912, 2080
BmiI GGNNCC 8 cut(s) 168, 418, 1196, 1623, 1692, 2032, 2081, 2082
BmrFI CCNGG 2 cut(s) 1688, 2001
BmrI ACTGGG 1 cut(s) 2085
BmsI GCATC 2 cut(s) 1458, 1557
BmtI GCTAGC 1 cut(s) 1149
BmuI ACTGGG 1 cut(s) 2085
BpiI GAAGAC 1 cut(s) 944
BpmI CTGGAG 2 cut(s) 1080, 1781
Bpu10I CCTNAGC 1 cut(s) 285
BpuEI CTTGAG 1 cut(s) 1132
BpuMI CCSGG 1 cut(s) 2001
BsaAI YACGTR 1 cut(s) 806
BsaBI GATNNNNATC 1 cut(s) 906
BsaI GGTCTC 1 cut(s) 1404
BsaJI CCNNGG 2 cut(s) 1744, 2150
BsaWI WCCGGW 3 cut(s) 188, 737, 1053
BsaXI ACNNNNNCTCC 2 cut(s) 533, 563
Bsc4I CCNNNNNNNGG 6 cut(s) 64, 290, 863, 1243, 1443, 1493
Bse118I RCCGGY 1 cut(s) 1944
Bse1I ACTGG 6 cut(s) 850, 1253, 1420, 1710, 1777, 2080
Bse8I GATNNNNATC 1 cut(s) 906
BseAI TCCGGA 2 cut(s) 737, 1053
BseBI CCWGG 1 cut(s) 1688
BseDI CCNNGG 2 cut(s) 1744, 2150
BseGI GGATG 2 cut(s) 1264, 1966
BseJI GATNNNNATC 1 cut(s) 906
BseLI CCNNNNNNNGG 6 cut(s) 64, 290, 863, 1243, 1443, 1493
BseMII CTCAG 8 cut(s) 276, 282, 564, 699, 772, 826, 1586, 1930
BseNI ACTGG 6 cut(s) 850, 1253, 1420, 1710, 1777, 2080
BseRI GAGGAG 1 cut(s) 2086
BseXI GCAGC 2 cut(s) 231, 1767
BseYI CCCAGC 1 cut(s) 1618
Bsh1236I CGCG 2 cut(s) 519, 1812
Bsh1285I CGRYCG 1 cut(s) 1945
BshFI GGCC 4 cut(s) 561, 1456, 1913, 1948
BsiEI CGRYCG 1 cut(s) 1945
BsiHKAI GWGCWC 4 cut(s) 435, 609, 1767, 1977
BsiHKCI CYCGRG 2 cut(s) 1342, 1976
BsiSI CCGG 6 cut(s) 189, 738, 799, 1054, 1945, 2000
BslFI GGGAC 4 cut(s) 229, 358, 1635, 2093
BslI CCNNNNNNNGG 6 cut(s) 64, 290, 863, 1243, 1443, 1493
BsmAI GTCTC 3 cut(s) 761, 1404, 1665
BsmFI GGGAC 4 cut(s) 229, 358, 1635, 2093
BsmI GAATGC 1 cut(s) 1147
BsnI GGCC 4 cut(s) 561, 1456, 1913, 1948
Bso31I GGTCTC 1 cut(s) 1404
BsoBI CYCGRG 2 cut(s) 1342, 1976
Bsp1286I GDGCHC 4 cut(s) 435, 609, 1767, 1977
Bsp13I TCCGGA 2 cut(s) 737, 1053
Bsp143I GATC 9 cut(s) 166, 272, 790, 823, 917, 1048, 1194, 1690, 2116
Bsp68I TCGCGA 1 cut(s) 1812
BspACI CCGC 4 cut(s) 65, 519, 591, 915
BspANI GGCC 4 cut(s) 561, 1456, 1913, 1948
BspCNI CTCAG 8 cut(s) 277, 281, 565, 700, 771, 825, 1585, 1929
BspEI TCCGGA 2 cut(s) 737, 1053
BspFNI CGCG 2 cut(s) 519, 1812
BspLI GGNNCC 8 cut(s) 168, 418, 1196, 1623, 1692, 2032, 2081, 2082
BspMAI CTGCAG 1 cut(s) 770
BspMI ACCTGC 1 cut(s) 1241
BspOI GCTAGC 1 cut(s) 1149
BspPI GGATC 8 cut(s) 161, 174, 280, 925, 1189, 1202, 1685, 1698
BspQI GCTCTTC 1 cut(s) 600
BspTI CTTAAG 1 cut(s) 337
BspTNI GGTCTC 1 cut(s) 1404
BsrBI CCGCTC 1 cut(s) 593
BsrFI RCCGGY 1 cut(s) 1944
BsrI ACTGG 6 cut(s) 850, 1253, 1420, 1710, 1777, 2080
BssAI RCCGGY 1 cut(s) 1944
BssECI CCNNGG 2 cut(s) 1744, 2150
BssMI GATC 9 cut(s) 166, 272, 790, 823, 917, 1048, 1194, 1690, 2116
BssSI CACGAG 1 cut(s) 1677
BssT1I CCWWGG 1 cut(s) 1744
Bst2BI CACGAG 1 cut(s) 1677
Bst2UI CCWGG 1 cut(s) 1688
Bst4CI ACNGT 2 cut(s) 989, 1506
Bst6I CTCTTC 2 cut(s) 600, 1377
BstAFI CTTAAG 1 cut(s) 337
BstAPI GCANNNNNTGC 1 cut(s) 1520
BstBAI YACGTR 1 cut(s) 806
BstC8I GCNNGC 3 cut(s) 1147, 1186, 1512
BstF5I GGATG 2 cut(s) 1264, 1966
BstFNI CGCG 2 cut(s) 519, 1812
BstH2I RGCGCY 1 cut(s) 284
BstHHI GCGC 3 cut(s) 283, 519, 672
BstKTI GATC 9 cut(s) 169, 275, 793, 826, 920, 1051, 1197, 1693, 2119
BstMAI GTCTC 3 cut(s) 761, 1404, 1665
BstMBI GATC 9 cut(s) 166, 272, 790, 823, 917, 1048, 1194, 1690, 2116
BstMCI CGRYCG 1 cut(s) 1945
BstMWI GCNNNNNNNGC 4 cut(s) 107, 250, 430, 1520
BstNI CCWGG 1 cut(s) 1688
BstNSI RCATGY 2 cut(s) 236, 1514
BstSCI CCNGG 2 cut(s) 1686, 1999
BstSFI CTRYAG 2 cut(s) 766, 1738
BstSNI TACGTA 1 cut(s) 806
BstUI CGCG 2 cut(s) 519, 1812
BstV1I GCAGC 2 cut(s) 231, 1767
BstV2I GAAGAC 1 cut(s) 944
BstX2I RGATCY 6 cut(s) 166, 272, 823, 917, 1194, 1690
BstYI RGATCY 6 cut(s) 166, 272, 823, 917, 1194, 1690
BsuI GTATCC 4 cut(s) 218, 359, 795, 1887
BsuRI GGCC 4 cut(s) 561, 1456, 1913, 1948
BtgZI GCGATG 2 cut(s) 1203, 1746
BtsCI GGATG 2 cut(s) 1264, 1966
BtsI GCAGTG 1 cut(s) 117
BtsIMutI CAGTG 5 cut(s) 117, 562, 1260, 2040, 2131
BtuMI TCGCGA 1 cut(s) 1812
BveI ACCTGC 1 cut(s) 1241
Cac8I GCNNGC 3 cut(s) 1147, 1186, 1512
CaiI CAGNNNCTG 2 cut(s) 707, 765
CfoI GCGC 3 cut(s) 283, 519, 672
Cfr10I RCCGGY 1 cut(s) 1944
Cfr13I GGNCC 8 cut(s) 186, 848, 1361, 1454, 1589, 1622, 1912, 2080
CseI GACGC 1 cut(s) 1296
Csp6I GTAC 1 cut(s) 1026
CviQI GTAC 1 cut(s) 1026
DpnI GATC 9 cut(s) 168, 274, 792, 825, 919, 1050, 1196, 1692, 2118
DpnII GATC 9 cut(s) 166, 272, 790, 823, 917, 1048, 1194, 1690, 2116
EaeI YGGCCR 2 cut(s) 559, 1946
Eam1104I CTCTTC 2 cut(s) 600, 1377
EarI CTCTTC 2 cut(s) 600, 1377
Ecl136II GAGCTC 3 cut(s) 433, 1765, 1975
Eco105I TACGTA 1 cut(s) 806
Eco130I CCWWGG 1 cut(s) 1744
Eco24I GRGCYC 3 cut(s) 435, 1767, 1977
Eco31I GGTCTC 1 cut(s) 1404
Eco32I GATATC 1 cut(s) 635
Eco47I GGWCC 6 cut(s) 186, 848, 1361, 1589, 1622, 2080
Eco53kI GAGCTC 3 cut(s) 433, 1765, 1975
Eco57I CTGAAG 5 cut(s) 111, 538, 938, 948, 1200
Eco88I CYCGRG 2 cut(s) 1342, 1976
EcoICRI GAGCTC 3 cut(s) 433, 1765, 1975
EcoO109I RGGNCCY 3 cut(s) 1454, 1622, 2080
EcoRII CCWGG 1 cut(s) 1686
EcoRV GATATC 1 cut(s) 635
EcoT14I CCWWGG 1 cut(s) 1744
EcoT22I ATGCAT 1 cut(s) 1516
EcoT38I GRGCYC 3 cut(s) 435, 1767, 1977
ErhI CCWWGG 1 cut(s) 1744
FaqI GGGAC 4 cut(s) 229, 358, 1635, 2093
FauI CCCGC 1 cut(s) 598
FauNDI CATATG 2 cut(s) 537, 1594
Fnu4HI GCNGC 3 cut(s) 245, 520, 1781
FokI GGATG 2 cut(s) 1271, 1973
FriOI GRGCYC 3 cut(s) 435, 1767, 1977
Fsp4HI GCNGC 3 cut(s) 245, 520, 1781
FspBI CTAG 5 cut(s) 59, 821, 1035, 1146, 1395
FspI TGCGCA 1 cut(s) 671
GlaI GCGC 3 cut(s) 282, 518, 671
GluI GCNGC 3 cut(s) 245, 520, 1781
GsaI CCCAGC 1 cut(s) 1622
GsuI CTGGAG 2 cut(s) 1080, 1781
HaeII RGCGCY 1 cut(s) 284
HaeIII GGCC 4 cut(s) 561, 1456, 1913, 1948
HapII CCGG 6 cut(s) 189, 738, 799, 1054, 1945, 2000
HgaI GACGC 1 cut(s) 1296
HhaI GCGC 3 cut(s) 283, 519, 672
Hin6I GCGC 3 cut(s) 281, 517, 670
HinP1I GCGC 3 cut(s) 281, 517, 670
HincII GTYRAC 2 cut(s) 469, 1719
HindII GTYRAC 2 cut(s) 469, 1719
HinfI GANTC 7 cut(s) 131, 262, 712, 835, 1090, 1205, 1576
HpaI GTTAAC 1 cut(s) 1719
HpaII CCGG 6 cut(s) 189, 738, 799, 1054, 1945, 2000
HphI GGTGA 6 cut(s) 218, 1099, 1302, 1828, 1978, 2013
Hpy166II GTNNAC 3 cut(s) 469, 1463, 1719
Hpy8I GTNNAC 3 cut(s) 469, 1463, 1719
HpyAV CCTTC 9 cut(s) 96, 109, 349, 562, 923, 1115, 1445, 1673, 2102
HpyCH4III ACNGT 2 cut(s) 989, 1506
HpyCH4IV ACGT 3 cut(s) 374, 805, 2103
HpyF10VI GCNNNNNNNGC 4 cut(s) 107, 250, 430, 1520
HpySE526I ACGT 3 cut(s) 374, 805, 2103
HspAI GCGC 3 cut(s) 281, 517, 670
KflI GGGWCCC 1 cut(s) 2080
Kpn2I TCCGGA 2 cut(s) 737, 1053
KspAI GTTAAC 1 cut(s) 1719
Kzo9I GATC 9 cut(s) 166, 272, 790, 823, 917, 1048, 1194, 1690, 2116
LguI GCTCTTC 1 cut(s) 600
LmnI GCTCC 4 cut(s) 779, 1762, 1972, 2003
Lsp1109I GCAGC 2 cut(s) 231, 1767
LweI GCATC 2 cut(s) 1458, 1557
MaeI CTAG 5 cut(s) 59, 821, 1035, 1146, 1395
MaeII ACGT 3 cut(s) 374, 805, 2103
MaeIII GTNAC 4 cut(s) 76, 806, 1105, 1308
MalI GATC 9 cut(s) 168, 274, 792, 825, 919, 1050, 1196, 1692, 2118
MbiI CCGCTC 1 cut(s) 593
MboI GATC 9 cut(s) 166, 272, 790, 823, 917, 1048, 1194, 1690, 2116
MboII GAAGA 9 cut(s) 46, 587, 590, 629, 944, 1275, 1394, 1460, 1474
MfeI CAATTG 1 cut(s) 888
MflI RGATCY 6 cut(s) 166, 272, 823, 917, 1194, 1690
MhlI GDGCHC 4 cut(s) 435, 609, 1767, 1977
MlsI TGGCCA 1 cut(s) 561
MluNI TGGCCA 1 cut(s) 561
MmeI TCCRAC 3 cut(s) 678, 1938, 2124
Mox20I TGGCCA 1 cut(s) 561
Mph1103I ATGCAT 1 cut(s) 1516
MroI TCCGGA 2 cut(s) 737, 1053
MroXI GAANNNNTTC 6 cut(s) 733, 1275, 1481, 1580, 1870, 1890
MscI TGGCCA 1 cut(s) 561
MseI TTAA 6 cut(s) 338, 524, 752, 1517, 1718, 2054
MslI CAYNNNNRTG 1 cut(s) 1885
Msp20I TGGCCA 1 cut(s) 561
MspCI CTTAAG 1 cut(s) 337
MspI CCGG 6 cut(s) 189, 738, 799, 1054, 1945, 2000
MspR9I CCNGG 2 cut(s) 1688, 2001
MunI CAATTG 1 cut(s) 888
Mva1269I GAATGC 1 cut(s) 1147
MvaI CCWGG 1 cut(s) 1688
MvnI CGCG 2 cut(s) 519, 1812
MwoI GCNNNNNNNGC 4 cut(s) 107, 250, 430, 1520
NciI CCSGG 1 cut(s) 2001
NdeI CATATG 2 cut(s) 537, 1594
NdeII GATC 9 cut(s) 166, 272, 790, 823, 917, 1048, 1194, 1690, 2116
NheI GCTAGC 1 cut(s) 1145
NlaIV GGNNCC 8 cut(s) 168, 418, 1196, 1623, 1692, 2032, 2081, 2082
NmuCI GTSAC 2 cut(s) 1105, 1308
NruI TCGCGA 1 cut(s) 1812
NsbI TGCGCA 1 cut(s) 671
NsiI ATGCAT 1 cut(s) 1516
NspI RCATGY 2 cut(s) 236, 1514
PaeI GCATGC 1 cut(s) 1514
PaeR7I CTCGAG 1 cut(s) 1976
PciSI GCTCTTC 1 cut(s) 600
PctI GAATGC 1 cut(s) 1147
PdmI GAANNNNTTC 6 cut(s) 733, 1275, 1481, 1580, 1870, 1890
PfeI GAWTC 7 cut(s) 131, 262, 712, 835, 1090, 1205, 1576
PflMI CCANNNNNTGG 1 cut(s) 863
PkrI GCNGC 3 cut(s) 246, 521, 1782
Ppu21I YACGTR 1 cut(s) 806
PpuMI RGGWCCY 2 cut(s) 1622, 2080
Psp124BI GAGCTC 3 cut(s) 435, 1767, 1977
Psp5II RGGWCCY 2 cut(s) 1622, 2080
Psp6I CCWGG 1 cut(s) 1686
PspFI CCCAGC 1 cut(s) 1618
PspGI CCWGG 1 cut(s) 1686
PspN4I GGNNCC 8 cut(s) 168, 418, 1196, 1623, 1692, 2032, 2081, 2082
PspPI GGNCC 8 cut(s) 186, 848, 1361, 1454, 1589, 1622, 1912, 2080
PspPPI RGGWCCY 2 cut(s) 1622, 2080
PstI CTGCAG 1 cut(s) 770
PstNI CAGNNNCTG 2 cut(s) 707, 765
PsuI RGATCY 6 cut(s) 166, 272, 823, 917, 1194, 1690
RruI TCGCGA 1 cut(s) 1812
RsaI GTAC 1 cut(s) 1027
RsaNI GTAC 1 cut(s) 1026
RseI CAYNNNNRTG 1 cut(s) 1885
SacI GAGCTC 3 cut(s) 435, 1767, 1977
SapI GCTCTTC 1 cut(s) 600
SaqAI TTAA 6 cut(s) 338, 524, 752, 1517, 1718, 2054
SatI GCNGC 3 cut(s) 245, 520, 1781
Sau3AI GATC 9 cut(s) 166, 272, 790, 823, 917, 1048, 1194, 1690, 2116
Sau96I GGNCC 8 cut(s) 186, 848, 1361, 1454, 1589, 1622, 1912, 2080
ScrFI CCNGG 2 cut(s) 1688, 2001
SduI GDGCHC 4 cut(s) 435, 609, 1767, 1977
SfaNI GCATC 2 cut(s) 1458, 1557
SfcI CTRYAG 2 cut(s) 766, 1738
Sfr274I CTCGAG 1 cut(s) 1976
SinI GGWCC 6 cut(s) 186, 848, 1361, 1589, 1622, 2080
SlaI CTCGAG 1 cut(s) 1976
SmiMI CAYNNNNRTG 1 cut(s) 1885
SmlI CTYRAG 3 cut(s) 337, 1111, 1976
SmoI CTYRAG 3 cut(s) 337, 1111, 1976
SnaBI TACGTA 1 cut(s) 806
SphI GCATGC 1 cut(s) 1514
SsiI CCGC 4 cut(s) 65, 519, 591, 915
SspI AATATT 1 cut(s) 2016
SspMI CTAG 5 cut(s) 59, 821, 1035, 1146, 1395
SstI GAGCTC 3 cut(s) 435, 1767, 1977
StyD4I CCNGG 2 cut(s) 1686, 1999
StyI CCWWGG 1 cut(s) 1744
TaaI ACNGT 2 cut(s) 989, 1506
TaiI ACGT 3 cut(s) 377, 808, 2106
TaqI TCGA 5 cut(s) 134, 684, 1605, 1977, 2066
TaqII GACCGA 1 cut(s) 865
TatI WGTACW 1 cut(s) 1025
TauI GCSGC 1 cut(s) 522
TfiI GAWTC 7 cut(s) 131, 262, 712, 835, 1090, 1205, 1576
Tru1I TTAA 6 cut(s) 338, 524, 752, 1517, 1718, 2054
Tru9I TTAA 6 cut(s) 338, 524, 752, 1517, 1718, 2054
TscAI CASTG 5 cut(s) 117, 562, 1260, 2047, 2131
TseFI GTSAC 2 cut(s) 1105, 1308
TseI GCWGC 2 cut(s) 244, 1780
Tsp45I GTSAC 2 cut(s) 1105, 1308
TspDTI ATGAA 7 cut(s) 313, 497, 554, 590, 1032, 1284, 2049
TspRI CASTG 5 cut(s) 117, 562, 1260, 2047, 2131
Van91I CCANNNNNTGG 1 cut(s) 863
Vha464I CTTAAG 1 cut(s) 337
VpaK11BI GGWCC 6 cut(s) 186, 848, 1361, 1589, 1622, 2080
XapI RAATTY 3 cut(s) 564, 1213, 1565
XbaI TCTAGA 1 cut(s) 820
XceI RCATGY 2 cut(s) 236, 1514
XhoI CTCGAG 1 cut(s) 1976
XmnI GAANNNNTTC 6 cut(s) 733, 1275, 1481, 1580, 1870, 1890
XspI CTAG 5 cut(s) 59, 821, 1035, 1146, 1395
Zsp2I ATGCAT 1 cut(s) 1516
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.