Rw3G008220
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0002297
Physical Location & Seq
Reverse (-)
7635625 .. 7642236
6612 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G008220.1

Sequence Viewer

Length: 2790 bp
ATGTTGAGACTGAGATTTTGGGGTTGCCTCATTGGTCTGGCTTGTTCTTGCTTCTTCCTAGTTGCGGTTGCACAAGTTACTAATCCTTCTGAAGTGGATGCATTGAGAGCAGTGAAGGGTTGTCTGATTGATTCCGGGAAGCATTTGGGGAATTGGGACAAAGGGGATCCATGTAAAGCGAATTGGACCGGAGTTTTGTGCTCCGGTGATGTTGGGACTGATGGATACTTGCATGTCCAGGAGCTGCAACTGCTAAGTAAGAATCTCTCAGGAACTTTAGCGCCTGAGCTTGGCAAACTATCTCAACTTCTGATATTAGATTTCATGTGGAATAACTTAAGTGGGACTATACCGAAGGAGATAGGAAACATTACGTCCTTGAAACTCTTGCTCTTGAATGGAAACAAACTATCGGGTTCCTTGCCTGATGAGCTCGGTAATCTTGAAAATCTACATAGACTACAAGTTGACCAGAACCATCTTTCAGGTTCAATACCAAAATCATTTGTTAACTTGCGCGGCTTAAGACACCTGCTCTTGGATAATAATAAATTATCTGGATATCTTCCACAAGAATTCTCCAACATTCCAGGGTTGCGCATACTTCAACTCGATAACAACAACTTCACGGGAACTGAGATTCCAGCTACTTATGGAACCCTTTCCGGATTGGCAAAGTTAAGTCTCAGGAACTGCAGTTTGCAGGGAGCAATTCCTGATCTTAGCCGGATACGTAACCTCAGTTATCTAGATCTAAGCTGGAATCATCTTGCTGGACCAATACCATCACATGGACTTTCTGACAATATGACAACAATTGACCTGTCAGATAATCATCTTAACGGATCTATTCCTGAAGGTTTCTCTCATTTTCCTCATCTTCAGAAATTGTCGCTCAAAAATAATCAGTTGAACGGTTCTGTCCCTGCTATATGGAGGAACATATCTTTTAGTACAAGAGCTAGACTTTCATTTGATCTCCGGAACAATTCACTCTCTAACATATTGGGAGAGCTGAATCCTCCAGCAAATGTCACCTTGAGGCTAGAAGGAAATCCTATTTGCAAGAATGCTAGCATAGAAAATATAAGCCCGTTCTGTCAATCTGAAGCGAGCGATGGGATCCCCGAAGATTCAATAAATTCAACTCAACAGATGACCTGCCCTATTCAAGCATGTCCAGTGGATGATTTCTATGAATATGTTCCATCTTCCCCTGTGCCATGCTTTTGTGCATCACCTATTATAGTTGAATATCGTCTGAAAAGCCCGAGCTTTTCTTACTTTCTTCCATATATACAGCAGTTTGAAGAGTATTTAACTAGGTCTCTAAAATTGGAGATTTACCAGTTATCAATTAGTTCCTTTGTCTGGGAAAAAGGGCCTCGTTTACGGATGCATTTGAAGTTCTTCCCTGTGTATGGTGCTTCACACTCGCATACATTAAATGCAAGTGAGGTTCTGCGAATTAGAGGCATCTTTACATCATGGGAATTTCCTCAGAATGATTTCTTTGGACCATATGAACTACTCGACTTCAAACTGCTGGGACCTTATTCAAATAGTATTGATTGTCAAAGACAAAAGATGGGCATCAATAAGGGTGTATTAGCAGCTGTTATAATAGGGGCCATTGCTTCTGTTGTCAGTATATCTGCAACAGTCATGCTTCTGTTCACAAGATGCACCCGAAACCGACACACACCACCTTCAAGGAGACACTCATCGTCGAAGATTTCTATGAGAATTGAAGGTGTAAAGGCGTTCACTTTCAAAGAAATGACACTAGCCACCAGGAACTTTGATAGTGCAACTCAACTTGGACGAGGAGGCTATGGGAAAGTTTATAAAGGTATCTTATCTGATAACACAGCTGTAGCCATAAAACGTGCAGAAGAAGGATCCCTACAGGGTGAAAAAGAATTCTTGACCGAGATAGAATTGTTATCAAGGCTACACCATCGAAACTTAGTCTCTTTGGTAGGATACTGTGAAGAAGAAGGGGAGCAGATGTTGGTTTATGAGTTCATGCCTAATGGTACCTTACGTGACTGGCTTTCTGATAAAACCAAGGGAAGCCTGGACTTCAGTATGAGATTACGTATTGCATTGGGTTCAGCCAAAGGAATTCTTTATCTCCATACCGAGGCAAATCCTCCTATATTCCACCGAGATATTAAAGCCACAAATATACTTTTGGACTCCAACTATATCGCTAAGGTGGCCGATTTTGGACTCTCACGACTAGCACCTGTCCAGAATGATGAAGGGACTGGCCCTGCATACGTATCTACAGTCGTGAGAGGAACACCGGGCTACCTGGATCCAGAGTATTTCTTGACCAGTAAGTTAACAGACAAAAGCGATGTCTATAGCCTTGGAATTGTGTTTCTGGAGCTCTTGACTGGTGTGCTGCCAATATCACATGGCAAAAACATTGTTCGCGAGGTGAATATGGCTCATCAGTCAGGCTTGATTTTCTCCATTATAGATAGCAGAATGGGTTCGTATCCATCTGAATGTGTTCAGAGGTTTGTAGCTTTGGCCCTCAGATGTTGCCATGATAAACAAGACGACCGGCCATCAATGTTGGATGTGGTGAGGGAGCTCGAGAACATAATCAAACTTATGCCGGGAGCTGAAACAATGTTTTCACCATCTGGTTCCTCATACACTGAAAAATCATTAACTTCATCATCGACTTTTACTGGGGACCCATATATGTCCTCCTCCAACGTGGAAGGAAGTGATCTAACCAGTGGTGTAATCCCTACCATCTCGCCTCGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

929

Amino Acids

102.71

Weight (kDa)

6.63

Isoelectric Point (pI)

40.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 29 - 68 3e-07 Leucine rich repeat N-terminal domain
LRR_14 PF23598 93 - 300 6.5e-11 Leucine-rich repeat region
LRR_8 PF13855 150 - 209 1.4e-09 Leucine rich repeat
Pkinase PF00069 603 - 868 1.5e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 605 - 870 2.7e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1622, 1848
AarI CACCTGC 1 cut(s) 540
Acc16I TGCGCA 1 cut(s) 599
Acc36I ACCTGC 2 cut(s) 540, 1169
Acc65I GGTACC 1 cut(s) 2039
AccB1I GGYRCC 1 cut(s) 2039
AccB7I CCANNNNNTGG 1 cut(s) 791
AccII CGCG 2 cut(s) 519, 2445
AccIII TCCGGA 2 cut(s) 665, 981
AciI CCGC 2 cut(s) 65, 519
AclWI GGATC 9 cut(s) 161, 174, 853, 1117, 1130, 1896, 1909, 2318, 2331
AcoI YGGCCR 2 cut(s) 2223, 2579
AcsI RAATTY 5 cut(s) 575, 1141, 1493, 1922, 2127
AcuI CTGAAG 5 cut(s) 111, 866, 876, 1128, 2071
AfaI GTAC 2 cut(s) 955, 2041
AfiI CCNNNNNNNGG 7 cut(s) 64, 290, 538, 791, 1371, 1421, 2146
AflII CTTAAG 2 cut(s) 337, 523
AjnI CCWGG 5 cut(s) 237, 589, 1793, 2079, 2319
AloI GAACNNNNNNTCC 2 cut(s) 625, 657
Alw21I GWGCWC 4 cut(s) 203, 435, 2400, 2610
Alw26I GTCTC 4 cut(s) 689, 1332, 1711, 1978
AlwI GGATC 9 cut(s) 161, 174, 853, 1117, 1130, 1896, 1909, 2318, 2331
AlwNI CAGNNNCTG 2 cut(s) 244, 693
Ama87I CYCGRG 2 cut(s) 1270, 2609
Aor13HI TCCGGA 2 cut(s) 665, 981
AoxI GGCC 6 cut(s) 1382, 1629, 2223, 2275, 2544, 2579
ApeKI GCWGC 3 cut(s) 244, 1613, 2413
ApoI RAATTY 5 cut(s) 575, 1141, 1493, 1922, 2127
ArsI GACNNNNNNTTYG 5 cut(s) 32, 178, 210, 2352, 2384
Asp700I GAANNNNTTC 6 cut(s) 661, 1203, 1409, 1508, 2503, 2523
Asp718I GGTACC 1 cut(s) 2039
AspLEI GCGC 3 cut(s) 283, 519, 600
AspS9I GGNCC 9 cut(s) 186, 776, 1382, 1517, 1550, 1629, 2276, 2545, 2713
AsuC2I CCSGG 3 cut(s) 136, 2313, 2634
AsuHPI GGTGA 7 cut(s) 218, 1027, 1230, 1925, 2461, 2611, 2646
AsuNHI GCTAGC 1 cut(s) 1073
AvaI CYCGRG 2 cut(s) 1270, 2609
AvaII GGWCC 5 cut(s) 186, 776, 1517, 1550, 2713
BamHI GGATCC 4 cut(s) 166, 1122, 1901, 2323
BanI GGYRCC 1 cut(s) 2039
BanII GRGCYC 3 cut(s) 435, 2400, 2610
BarI GAAGNNNNNNTAC 2 cut(s) 1890, 1922
Bbv12I GWGCWC 4 cut(s) 203, 435, 2400, 2610
BbvI GCAGC 3 cut(s) 231, 1625, 2400
BciT130I CCWGG 5 cut(s) 239, 591, 1795, 2081, 2321
BciVI GTATCC 4 cut(s) 218, 723, 1979, 2520
BcnI CCSGG 3 cut(s) 136, 2313, 2634
BcoDI GTCTC 4 cut(s) 689, 1332, 1711, 1978
BfaI CTAG 8 cut(s) 59, 749, 963, 1046, 1074, 1323, 1787, 2246
BfmI CTRYAG 5 cut(s) 694, 1875, 1907, 2292, 2371
BfoI RGCGCY 1 cut(s) 284
BfrI CTTAAG 2 cut(s) 337, 523
BfuAI ACCTGC 2 cut(s) 540, 1169
BfuI GTATCC 4 cut(s) 218, 723, 1979, 2520
BglII AGATCT 1 cut(s) 751
BisI GCNGC 4 cut(s) 245, 520, 1614, 2414
BlsI GCNGC 4 cut(s) 246, 521, 1615, 2415
Bme1390I CCNGG 8 cut(s) 136, 239, 591, 1795, 2081, 2313, 2321, 2634
Bme18I GGWCC 5 cut(s) 186, 776, 1517, 1550, 2713
BmeT110I CYCGRG 2 cut(s) 1270, 2609
BmgT120I GGNCC 9 cut(s) 186, 776, 1382, 1517, 1550, 1629, 2276, 2545, 2713
BmrFI CCNGG 8 cut(s) 136, 239, 591, 1795, 2081, 2313, 2321, 2634
BmrI ACTGGG 1 cut(s) 2718
BmsI GCATC 6 cut(s) 88, 1244, 1386, 1485, 1602, 1673
BmtI GCTAGC 1 cut(s) 1077
BmuI ACTGGG 1 cut(s) 2718
BpmI CTGGAG 2 cut(s) 1008, 2414
Bpu10I CCTNAGC 2 cut(s) 285, 2217
BpuEI CTTGAG 1 cut(s) 1060
BpuMI CCSGG 3 cut(s) 136, 2313, 2634
BsaAI YACGTR 4 cut(s) 734, 2048, 2102, 2287
BsaBI GATNNNNATC 2 cut(s) 834, 1592
BsaI GGTCTC 1 cut(s) 1332
BsaJI CCNNGG 5 cut(s) 590, 2070, 2145, 2377, 2783
BsaWI WCCGGW 4 cut(s) 188, 203, 665, 981
BsaXI ACNNNNNCTCC 2 cut(s) 1997, 2027
Bsc4I CCNNNNNNNGG 7 cut(s) 64, 290, 538, 791, 1371, 1421, 2146
Bse118I RCCGGY 1 cut(s) 2577
Bse1I ACTGG 8 cut(s) 1181, 1348, 2057, 2278, 2343, 2410, 2713, 2757
Bse3DI GCAATG 1 cut(s) 1632
Bse8I GATNNNNATC 2 cut(s) 834, 1592
BseAI TCCGGA 2 cut(s) 665, 981
BseBI CCWGG 5 cut(s) 239, 591, 1795, 2081, 2321
BseDI CCNNGG 5 cut(s) 590, 2070, 2145, 2377, 2783
BseGI GGATG 4 cut(s) 103, 1192, 1401, 2599
BseJI GATNNNNATC 2 cut(s) 834, 1592
BseLI CCNNNNNNNGG 7 cut(s) 64, 290, 538, 791, 1371, 1421, 2146
BseMI GCAATG 1 cut(s) 1632
BseMII CTCAG 7 cut(s) 276, 282, 627, 700, 754, 1514, 2563
BseNI ACTGG 8 cut(s) 1181, 1348, 2057, 2278, 2343, 2410, 2713, 2757
BseRI GAGGAG 2 cut(s) 1842, 2719
BseXI GCAGC 3 cut(s) 231, 1625, 2400
BseYI CCCAGC 1 cut(s) 1546
BsgI GTGCAG 1 cut(s) 1911
Bsh1236I CGCG 2 cut(s) 519, 2445
Bsh1285I CGRYCG 1 cut(s) 2578
BshFI GGCC 6 cut(s) 1384, 1631, 2225, 2277, 2546, 2581
BshNI GGYRCC 1 cut(s) 2039
BsiEI CGRYCG 1 cut(s) 2578
BsiHKAI GWGCWC 4 cut(s) 203, 435, 2400, 2610
BsiHKCI CYCGRG 2 cut(s) 1270, 2609
BsiSI CCGG 9 cut(s) 135, 189, 204, 666, 727, 982, 2312, 2578, 2633
BslFI GGGAC 7 cut(s) 170, 229, 358, 908, 1563, 2284, 2726
BslI CCNNNNNNNGG 7 cut(s) 64, 290, 538, 791, 1371, 1421, 2146
BsmAI GTCTC 4 cut(s) 689, 1332, 1711, 1978
BsmFI GGGAC 7 cut(s) 170, 229, 358, 908, 1563, 2284, 2726
BsmI GAATGC 1 cut(s) 1075
BsnI GGCC 6 cut(s) 1384, 1631, 2225, 2277, 2546, 2581
Bso31I GGTCTC 1 cut(s) 1332
BsoBI CYCGRG 2 cut(s) 1270, 2609
Bsp1286I GDGCHC 4 cut(s) 203, 435, 2400, 2610
Bsp13I TCCGGA 2 cut(s) 665, 981
Bsp143I GATC 9 cut(s) 166, 718, 751, 845, 976, 1122, 1901, 2323, 2749
Bsp68I TCGCGA 1 cut(s) 2445
BspACI CCGC 2 cut(s) 65, 519
BspANI GGCC 6 cut(s) 1384, 1631, 2225, 2277, 2546, 2581
BspCNI CTCAG 7 cut(s) 277, 281, 628, 699, 753, 1513, 2562
BspEI TCCGGA 2 cut(s) 665, 981
BspFNI CGCG 2 cut(s) 519, 2445
BspMAI CTGCAG 1 cut(s) 698
BspMI ACCTGC 2 cut(s) 540, 1169
BspOI GCTAGC 1 cut(s) 1077
BspPI GGATC 9 cut(s) 161, 174, 853, 1117, 1130, 1896, 1909, 2318, 2331
BspT107I GGYRCC 1 cut(s) 2039
BspTI CTTAAG 2 cut(s) 337, 523
BspTNI GGTCTC 1 cut(s) 1332
BsrDI GCAATG 1 cut(s) 1632
BsrFI RCCGGY 1 cut(s) 2577
BsrI ACTGG 8 cut(s) 1181, 1348, 2057, 2278, 2343, 2410, 2713, 2757
BssAI RCCGGY 1 cut(s) 2577
BssECI CCNNGG 5 cut(s) 590, 2070, 2145, 2377, 2783
BssMI GATC 9 cut(s) 166, 718, 751, 845, 976, 1122, 1901, 2323, 2749
BssT1I CCWWGG 2 cut(s) 2070, 2377
Bst2UI CCWGG 5 cut(s) 239, 591, 1795, 2081, 2321
Bst4CI ACNGT 4 cut(s) 917, 1663, 1991, 2296
Bst6I CTCTTC 1 cut(s) 1305
BstAFI CTTAAG 2 cut(s) 337, 523
BstBAI YACGTR 4 cut(s) 734, 2048, 2102, 2287
BstC8I GCNNGC 2 cut(s) 1075, 1114
BstF5I GGATG 4 cut(s) 103, 1192, 1401, 2599
BstFNI CGCG 2 cut(s) 519, 2445
BstH2I RGCGCY 1 cut(s) 284
BstHHI GCGC 3 cut(s) 283, 519, 600
BstKTI GATC 9 cut(s) 169, 721, 754, 848, 979, 1125, 1904, 2326, 2752
BstMAI GTCTC 4 cut(s) 689, 1332, 1711, 1978
BstMBI GATC 9 cut(s) 166, 718, 751, 845, 976, 1122, 1901, 2323, 2749
BstMCI CGRYCG 1 cut(s) 2578
BstMWI GCNNNNNNNGC 4 cut(s) 107, 250, 430, 2222
BstNI CCWGG 5 cut(s) 239, 591, 1795, 2081, 2321
BstNSI RCATGY 2 cut(s) 236, 1179
BstSCI CCNGG 8 cut(s) 134, 237, 589, 1793, 2079, 2311, 2319, 2632
BstSFI CTRYAG 5 cut(s) 694, 1875, 1907, 2292, 2371
BstSNI TACGTA 3 cut(s) 734, 2102, 2287
BstUI CGCG 2 cut(s) 519, 2445
BstV1I GCAGC 3 cut(s) 231, 1625, 2400
BstX2I RGATCY 6 cut(s) 166, 751, 845, 1122, 1901, 2323
BstYI RGATCY 6 cut(s) 166, 751, 845, 1122, 1901, 2323
BsuI GTATCC 4 cut(s) 218, 723, 1979, 2520
BsuRI GGCC 6 cut(s) 1384, 1631, 2225, 2277, 2546, 2581
BtgZI GCGATG 2 cut(s) 1131, 2379
BtsCI GGATG 4 cut(s) 103, 1192, 1401, 2599
BtsI GCAGTG 1 cut(s) 117
BtsIMutI CAGTG 4 cut(s) 117, 1188, 2673, 2764
BtuMI TCGCGA 1 cut(s) 2445
BveI ACCTGC 2 cut(s) 540, 1169
Cac8I GCNNGC 2 cut(s) 1075, 1114
CaiI CAGNNNCTG 2 cut(s) 244, 693
CfoI GCGC 3 cut(s) 283, 519, 600
Cfr10I RCCGGY 1 cut(s) 2577
Cfr13I GGNCC 9 cut(s) 186, 776, 1382, 1517, 1550, 1629, 2276, 2545, 2713
Csp6I GTAC 2 cut(s) 954, 2040
CviQI GTAC 2 cut(s) 954, 2040
DpnI GATC 9 cut(s) 168, 720, 753, 847, 978, 1124, 1903, 2325, 2751
DpnII GATC 9 cut(s) 166, 718, 751, 845, 976, 1122, 1901, 2323, 2749
EaeI YGGCCR 2 cut(s) 2223, 2579
Eam1104I CTCTTC 1 cut(s) 1305
EarI CTCTTC 1 cut(s) 1305
Ecl136II GAGCTC 3 cut(s) 433, 2398, 2608
Eco105I TACGTA 3 cut(s) 734, 2102, 2287
Eco130I CCWWGG 2 cut(s) 2070, 2377
Eco24I GRGCYC 3 cut(s) 435, 2400, 2610
Eco31I GGTCTC 1 cut(s) 1332
Eco32I GATATC 1 cut(s) 563
Eco47I GGWCC 5 cut(s) 186, 776, 1517, 1550, 2713
Eco53kI GAGCTC 3 cut(s) 433, 2398, 2608
Eco57I CTGAAG 5 cut(s) 111, 866, 876, 1128, 2071
Eco88I CYCGRG 2 cut(s) 1270, 2609
EcoICRI GAGCTC 3 cut(s) 433, 2398, 2608
EcoO109I RGGNCCY 3 cut(s) 1382, 1550, 2713
EcoRI GAATTC 3 cut(s) 575, 1922, 2127
EcoRII CCWGG 5 cut(s) 237, 589, 1793, 2079, 2319
EcoRV GATATC 1 cut(s) 563
EcoT14I CCWWGG 2 cut(s) 2070, 2377
EcoT22I ATGCAT 2 cut(s) 103, 1401
EcoT38I GRGCYC 3 cut(s) 435, 2400, 2610
ErhI CCWWGG 2 cut(s) 2070, 2377
FalI AAGNNNNNCTT 2 cut(s) 2115, 2147
FaqI GGGAC 7 cut(s) 170, 229, 358, 908, 1563, 2284, 2726
FauNDI CATATG 1 cut(s) 1522
Fnu4HI GCNGC 4 cut(s) 245, 520, 1614, 2414
FokI GGATG 4 cut(s) 110, 1199, 1408, 2606
FriOI GRGCYC 3 cut(s) 435, 2400, 2610
Fsp4HI GCNGC 4 cut(s) 245, 520, 1614, 2414
FspBI CTAG 8 cut(s) 59, 749, 963, 1046, 1074, 1323, 1787, 2246
FspI TGCGCA 1 cut(s) 599
GlaI GCGC 3 cut(s) 282, 518, 599
GluI GCNGC 4 cut(s) 245, 520, 1614, 2414
GsaI CCCAGC 1 cut(s) 1550
GsuI CTGGAG 2 cut(s) 1008, 2414
HaeII RGCGCY 1 cut(s) 284
HaeIII GGCC 6 cut(s) 1384, 1631, 2225, 2277, 2546, 2581
HapII CCGG 9 cut(s) 135, 189, 204, 666, 727, 982, 2312, 2578, 2633
HhaI GCGC 3 cut(s) 283, 519, 600
Hin6I GCGC 3 cut(s) 281, 517, 598
HinP1I GCGC 3 cut(s) 281, 517, 598
HincII GTYRAC 3 cut(s) 469, 511, 2352
HindII GTYRAC 3 cut(s) 469, 511, 2352
HinfI GANTC 8 cut(s) 131, 262, 640, 763, 1018, 1133, 2201, 2235
HpaI GTTAAC 2 cut(s) 511, 2352
HpaII CCGG 9 cut(s) 135, 189, 204, 666, 727, 982, 2312, 2578, 2633
HphI GGTGA 7 cut(s) 218, 1027, 1230, 1925, 2461, 2611, 2646
Hpy166II GTNNAC 6 cut(s) 469, 511, 1391, 1677, 1767, 2352
Hpy8I GTNNAC 6 cut(s) 469, 511, 1391, 1677, 1767, 2352
Hpy99I CGWCG 1 cut(s) 1732
HpyCH4III ACNGT 4 cut(s) 917, 1663, 1991, 2296
HpyCH4IV ACGT 7 cut(s) 374, 733, 1888, 2047, 2101, 2286, 2736
HpyF10VI GCNNNNNNNGC 4 cut(s) 107, 250, 430, 2222
HpySE526I ACGT 7 cut(s) 374, 733, 1888, 2047, 2101, 2286, 2736
HspAI GCGC 3 cut(s) 281, 517, 598
KflI GGGWCCC 1 cut(s) 2713
Kpn2I TCCGGA 2 cut(s) 665, 981
KpnI GGTACC 1 cut(s) 2043
KspAI GTTAAC 2 cut(s) 511, 2352
Kzo9I GATC 9 cut(s) 166, 718, 751, 845, 976, 1122, 1901, 2323, 2749
LmnI GCTCC 7 cut(s) 206, 241, 707, 2005, 2395, 2605, 2636
Lsp1109I GCAGC 3 cut(s) 231, 1625, 2400
LweI GCATC 6 cut(s) 88, 1244, 1386, 1485, 1602, 1673
MaeI CTAG 8 cut(s) 59, 749, 963, 1046, 1074, 1323, 1787, 2246
MaeII ACGT 7 cut(s) 374, 733, 1888, 2047, 2101, 2286, 2736
MaeIII GTNAC 4 cut(s) 76, 734, 1033, 2048
MalI GATC 9 cut(s) 168, 720, 753, 847, 978, 1124, 1903, 2325, 2751
MboI GATC 9 cut(s) 166, 718, 751, 845, 976, 1122, 1901, 2323, 2749
MfeI CAATTG 1 cut(s) 816
MflI RGATCY 6 cut(s) 166, 751, 845, 1122, 1901, 2323
MhlI GDGCHC 4 cut(s) 203, 435, 2400, 2610
MlyI GAGTC 2 cut(s) 2195, 2229
MmeI TCCRAC 4 cut(s) 606, 2229, 2571, 2757
Mph1103I ATGCAT 2 cut(s) 103, 1401
MroI TCCGGA 2 cut(s) 665, 981
MroXI GAANNNNTTC 6 cut(s) 661, 1203, 1409, 1508, 2503, 2523
MslI CAYNNNNRTG 1 cut(s) 2518
MspA1I CMGCKG 2 cut(s) 1616, 1874
MspCI CTTAAG 2 cut(s) 337, 523
MspI CCGG 9 cut(s) 135, 189, 204, 666, 727, 982, 2312, 2578, 2633
MspR9I CCNGG 8 cut(s) 136, 239, 591, 1795, 2081, 2313, 2321, 2634
MunI CAATTG 1 cut(s) 816
Mva1269I GAATGC 1 cut(s) 1075
MvaI CCWGG 5 cut(s) 239, 591, 1795, 2081, 2321
MvnI CGCG 2 cut(s) 519, 2445
MwoI GCNNNNNNNGC 4 cut(s) 107, 250, 430, 2222
NciI CCSGG 3 cut(s) 136, 2313, 2634
NdeI CATATG 1 cut(s) 1522
NdeII GATC 9 cut(s) 166, 718, 751, 845, 976, 1122, 1901, 2323, 2749
NheI GCTAGC 1 cut(s) 1073
NmuCI GTSAC 2 cut(s) 1033, 2048
NruI TCGCGA 1 cut(s) 2445
NsbI TGCGCA 1 cut(s) 599
NsiI ATGCAT 2 cut(s) 103, 1401
NspI RCATGY 2 cut(s) 236, 1179
PaeR7I CTCGAG 1 cut(s) 2609
PaqCI CACCTGC 1 cut(s) 540
PctI GAATGC 1 cut(s) 1075
PdmI GAANNNNTTC 6 cut(s) 661, 1203, 1409, 1508, 2503, 2523
PfeI GAWTC 6 cut(s) 131, 262, 640, 763, 1018, 1133
PflMI CCANNNNNTGG 1 cut(s) 791
PfoI TCCNGGA 2 cut(s) 134, 237
PkrI GCNGC 4 cut(s) 246, 521, 1615, 2415
PleI GAGTC 2 cut(s) 2195, 2229
PpsI GAGTC 2 cut(s) 2195, 2229
Ppu21I YACGTR 4 cut(s) 734, 2048, 2102, 2287
PpuMI RGGWCCY 2 cut(s) 1550, 2713
PsiI TTATAA 2 cut(s) 1622, 1848
Psp124BI GAGCTC 3 cut(s) 435, 2400, 2610
Psp5II RGGWCCY 2 cut(s) 1550, 2713
Psp6I CCWGG 5 cut(s) 237, 589, 1793, 2079, 2319
PspFI CCCAGC 1 cut(s) 1546
PspGI CCWGG 5 cut(s) 237, 589, 1793, 2079, 2319
PspPI GGNCC 9 cut(s) 186, 776, 1382, 1517, 1550, 1629, 2276, 2545, 2713
PspPPI RGGWCCY 2 cut(s) 1550, 2713
PstI CTGCAG 1 cut(s) 698
PstNI CAGNNNCTG 2 cut(s) 244, 693
PsuI RGATCY 6 cut(s) 166, 751, 845, 1122, 1901, 2323
PvuII CAGCTG 2 cut(s) 1616, 1874
RruI TCGCGA 1 cut(s) 2445
RsaI GTAC 2 cut(s) 955, 2041
RsaNI GTAC 2 cut(s) 954, 2040
RseI CAYNNNNRTG 1 cut(s) 2518
SacI GAGCTC 3 cut(s) 435, 2400, 2610
SatI GCNGC 4 cut(s) 245, 520, 1614, 2414
Sau3AI GATC 9 cut(s) 166, 718, 751, 845, 976, 1122, 1901, 2323, 2749
Sau96I GGNCC 9 cut(s) 186, 776, 1382, 1517, 1550, 1629, 2276, 2545, 2713
SchI GAGTC 2 cut(s) 2195, 2229
ScrFI CCNGG 8 cut(s) 136, 239, 591, 1795, 2081, 2313, 2321, 2634
SduI GDGCHC 4 cut(s) 203, 435, 2400, 2610
SfaNI GCATC 6 cut(s) 88, 1244, 1386, 1485, 1602, 1673
SfcI CTRYAG 5 cut(s) 694, 1875, 1907, 2292, 2371
Sfr274I CTCGAG 1 cut(s) 2609
SinI GGWCC 5 cut(s) 186, 776, 1517, 1550, 2713
SlaI CTCGAG 1 cut(s) 2609
SmiMI CAYNNNNRTG 1 cut(s) 2518
SmlI CTYRAG 4 cut(s) 337, 523, 1039, 2609
SmoI CTYRAG 4 cut(s) 337, 523, 1039, 2609
SnaBI TACGTA 3 cut(s) 734, 2102, 2287
SsiI CCGC 2 cut(s) 65, 519
SspMI CTAG 8 cut(s) 59, 749, 963, 1046, 1074, 1323, 1787, 2246
SstI GAGCTC 3 cut(s) 435, 2400, 2610
StyD4I CCNGG 8 cut(s) 134, 237, 589, 1793, 2079, 2311, 2319, 2632
StyI CCWWGG 2 cut(s) 2070, 2377
TaaI ACNGT 4 cut(s) 917, 1663, 1991, 2296
TaiI ACGT 7 cut(s) 377, 736, 1891, 2050, 2104, 2289, 2739
TaqI TCGA 6 cut(s) 612, 1533, 1730, 1963, 2610, 2699
TaqII GACCGA 1 cut(s) 1946
TatI WGTACW 1 cut(s) 953
TauI GCSGC 1 cut(s) 522
TfiI GAWTC 6 cut(s) 131, 262, 640, 763, 1018, 1133
TscAI CASTG 4 cut(s) 117, 1188, 2680, 2764
TseFI GTSAC 2 cut(s) 1033, 2048
TseI GCWGC 3 cut(s) 244, 1613, 2413
Tsp45I GTSAC 2 cut(s) 1033, 2048
TspDTI ATGAA 7 cut(s) 313, 960, 1212, 1539, 2017, 2280, 2682
TspGWI ACGGA 2 cut(s) 858, 1408
TspRI CASTG 4 cut(s) 117, 1188, 2680, 2764
Van91I CCANNNNNTGG 1 cut(s) 791
Vha464I CTTAAG 2 cut(s) 337, 523
VpaK11BI GGWCC 5 cut(s) 186, 776, 1517, 1550, 2713
XapI RAATTY 5 cut(s) 575, 1141, 1493, 1922, 2127
XbaI TCTAGA 1 cut(s) 748
XceI RCATGY 2 cut(s) 236, 1179
XcmI CCANNNNNNNNNTGG 1 cut(s) 2077
XhoI CTCGAG 1 cut(s) 2609
XmnI GAANNNNTTC 6 cut(s) 661, 1203, 1409, 1508, 2503, 2523
XspI CTAG 8 cut(s) 59, 749, 963, 1046, 1074, 1323, 1787, 2246
Zsp2I ATGCAT 2 cut(s) 103, 1401
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.