AT5G54100

Band 7 family protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
21953700 .. 21956580
2881 bp
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UTR
Exon/CDS
Intron
AT5G54100.1

Sequence Viewer

Length: 1206 bp
ATGAATCAGCTCGCGCTTTCAAGATCCGGTTACACCGCCGCCGTGAGGTTTCTCCCTATGCTTTCCGCAGCTGTTCCGAAGATCTTATCATCTCTCGCCGCCGCATCCACCGTCCGCAACTTCAGCTCTACCGGAAGTCCTCTCACCAGCTACCAAATCAATAAACCTTCGCCGTCAAAATCCTTCACTTCCAGGCTTCTCCACCAATCCTCCTCCGCCGGTACTCCTCCGCAACAACTTTTCGGCGCCCGTAGCTTCTCATCTCCCAGCAGTGATTTCAACAGCTACCACATTAATCCGCCGTCTAACTGGGGAATCCGAATCGTGCCGGAGAGGAAAGCTTGTGTGATTGAGCGGTTTGGTAAATTCCACACGACTTTGCCGGCGGGGATTCACTTCCTTGTTCCGTTTGTGGATCGTATCGCTTATGTTCATTCTCTAAAGGAAGAAGCGATTCCTATTGGTAATCAGACTGCGATTACAAAGGATAACGTTAGCATCCACATCGATGGTGTTCTCTACGTTAAGATTGTGGATCCTAAGTTGGCTTCTTATGGCGTTGAGAATCCGATCTATGCTGTTATGCAGTTGGCTCAGACTACAATGCGTAGTGAGCTCGGTAAAATTACTCTTGACAAGACTTTTGAGGAACGGGACACTCTCAATGAGAAGATTGTGGAAGCCATCAATGTTGCTGCAAAAGATTGGGGTCTTCAGTGCCTTCGTTATGAGATCAGGGATATCATGCCTCCTAATGGAGTGAGAGTTGCTATGGAAATGCAAGCTGAAGCTGAACGTAAAAAGAGAGCCCAGATTCTTGAGTCTGAAGGAGAACGTCAAGCCCATATCAATAGAGCTGATGGTAAGAAAAGTTCTGTAATCTTGGAATCAGAAGCTGCAATGATGGACCAAGTCAATCGTGCACAAGGTGAGGCTGAAGCAATATTAGCTAGAGCACAAGCAACAGCCAAGGGACTGGCCATGGTATCTCAATCCCTCAAGGAAGCTGGTGGAGAGGAGGCTGCGAGTTTGAGAGTTGCGGAGCAATACATTCAAGCTTTTGGCAAAATTGCTAAGGAGGGTACAACAATGCTGCTTCCGAGTAATGTCGACAATCCTGCTAGCATGATCGCTCAAGCTTTAGGAATGTACAAAGGGTTGTCAACAAAGGTCCCAACAGTGGTTTCAGGGAAACTTCTGGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

401

Amino Acids

43.61

Weight (kDa)

9.11

Isoelectric Point (pI)

40.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Band_7 PF01145 108 - 278 8e-35 SPFH domain / Band 7 family
Band_7_C PF16200 328 - 388 2.8e-26 C-terminal region of band_7
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 245
AccBSI CCGCTC 1 cut(s) 355
AccI GTMKAC 1 cut(s) 1110
AccII CGCG 1 cut(s) 14
AclI AACGTT 1 cut(s) 492
AclWI GGATC 4 cut(s) 18, 423, 530, 543
AcoI YGGCCR 1 cut(s) 978
AcsI RAATTY 1 cut(s) 365
AcuI CTGAAG 5 cut(s) 106, 698, 807, 846, 957
AcyI GRCGYC 1 cut(s) 246
AdeI CACNNNGTG 1 cut(s) 929
AfaI GTAC 3 cut(s) 223, 1084, 1151
AfiI CCNNNNNNNGG 3 cut(s) 45, 755, 1180
AgsI TTSAA 3 cut(s) 21, 280, 1055
AjnI CCWGG 1 cut(s) 191
AjuI GAANNNNNNNTTGG 2 cut(s) 1168, 1200
Alw21I GWGCWC 3 cut(s) 618, 925, 958
Alw44I GTGCAC 1 cut(s) 921
AlwI GGATC 4 cut(s) 18, 423, 530, 543
AlwNI CAGNNNCTG 1 cut(s) 896
AoxI GGCC 1 cut(s) 978
ApaLI GTGCAC 1 cut(s) 921
ApeKI GCWGC 5 cut(s) 68, 695, 896, 1022, 1093
ApoI RAATTY 1 cut(s) 365
ArsI GACNNNNNNTTYG 2 cut(s) 626, 658
AseI ATTAAT 1 cut(s) 294
Asp700I GAANNNNTTC 1 cut(s) 453
AspLEI GCGC 2 cut(s) 16, 248
AspS9I GGNCC 2 cut(s) 907, 1171
AsuHPI GGTGA 2 cut(s) 136, 941
AsuNHI GCTAGC 1 cut(s) 1121
AvaII GGWCC 2 cut(s) 907, 1171
BaeGI GKGCMC 1 cut(s) 925
BalI TGGCCA 1 cut(s) 980
BamHI GGATCC 1 cut(s) 535
BanI GGYRCC 1 cut(s) 245
BanII GRGCYC 2 cut(s) 618, 811
BbsI GAAGAC 1 cut(s) 704
Bbv12I GWGCWC 3 cut(s) 618, 925, 958
BbvI GCAGC 5 cut(s) 80, 682, 883, 1009, 1080
BccI CCATC 4 cut(s) 503, 692, 854, 898
BceAI ACGGC 3 cut(s) 26, 157, 286
BcgI CGANNNNNNTGC 4 cut(s) 487, 521, 1100, 1134
BciT130I CCWGG 1 cut(s) 193
BfaI CTAG 2 cut(s) 951, 1122
BfoI RGCGCY 1 cut(s) 249
BglII AGATCT 1 cut(s) 81
BisI GCNGC 8 cut(s) 39, 69, 99, 102, 696, 897, 1023, 1094
BlsI GCNGC 8 cut(s) 40, 70, 100, 103, 697, 898, 1024, 1095
Bme1390I CCNGG 1 cut(s) 193
Bme18I GGWCC 2 cut(s) 907, 1171
BmgT120I GGNCC 2 cut(s) 907, 1171
BmiI GGNNCC 3 cut(s) 247, 537, 1173
BmrFI CCNGG 1 cut(s) 193
BmrI ACTGGG 1 cut(s) 319
BmsI GCATC 2 cut(s) 113, 507
BmtI GCTAGC 1 cut(s) 1125
BmuI ACTGGG 1 cut(s) 319
BpiI GAAGAC 1 cut(s) 704
Bpu10I CCTNAGC 1 cut(s) 1074
BpuEI CTTGAG 3 cut(s) 839, 983, 1119
Bsa29I ATCGAT 1 cut(s) 507
BsaHI GRCGYC 1 cut(s) 246
BsaJI CCNNGG 2 cut(s) 969, 981
BsaWI WCCGGW 2 cut(s) 26, 131
BsaXI ACNNNNNCTCC 4 cut(s) 194, 224, 750, 780
Bsc4I CCNNNNNNNGG 3 cut(s) 45, 755, 1180
Bse118I RCCGGY 2 cut(s) 218, 382
Bse1I ACTGG 2 cut(s) 314, 981
Bse3DI GCAATG 1 cut(s) 906
BseBI CCWGG 1 cut(s) 193
BseCI ATCGAT 1 cut(s) 507
BseDI CCNNGG 2 cut(s) 969, 981
BseGI GGATG 2 cut(s) 104, 498
BseLI CCNNNNNNNGG 3 cut(s) 45, 755, 1180
BseMI GCAATG 1 cut(s) 906
BseMII CTCAG 1 cut(s) 608
BseNI ACTGG 2 cut(s) 314, 981
BseRI GAGGAG 3 cut(s) 202, 216, 1031
BseSI GKGCMC 1 cut(s) 925
BseXI GCAGC 5 cut(s) 80, 682, 883, 1009, 1080
BseYI CCCAGC 1 cut(s) 266
Bsh1236I CGCG 1 cut(s) 14
BshFI GGCC 1 cut(s) 980
BshNI GGYRCC 1 cut(s) 245
BshVI ATCGAT 1 cut(s) 507
BsiHKAI GWGCWC 3 cut(s) 618, 925, 958
BsiSI CCGG 5 cut(s) 27, 132, 219, 329, 383
BslFI GGGAC 3 cut(s) 668, 987, 1157
BslI CCNNNNNNNGG 3 cut(s) 45, 755, 1180
BsmFI GGGAC 3 cut(s) 668, 987, 1157
BsnI GGCC 1 cut(s) 980
Bsp1286I GDGCHC 4 cut(s) 618, 811, 925, 958
Bsp1407I TGTACA 1 cut(s) 1149
Bsp143I GATC 7 cut(s) 23, 81, 415, 535, 570, 732, 1128
Bsp19I CCATGG 1 cut(s) 981
BspANI GGCC 1 cut(s) 980
BspCNI CTCAG 1 cut(s) 607
BspDI ATCGAT 1 cut(s) 507
BspFNI CGCG 1 cut(s) 14
BspLI GGNNCC 3 cut(s) 247, 537, 1173
BspOI GCTAGC 1 cut(s) 1125
BspPI GGATC 4 cut(s) 18, 423, 530, 543
BspT107I GGYRCC 1 cut(s) 245
BsrBI CCGCTC 1 cut(s) 355
BsrDI GCAATG 1 cut(s) 906
BsrFI RCCGGY 2 cut(s) 218, 382
BsrGI TGTACA 1 cut(s) 1149
BsrI ACTGG 2 cut(s) 314, 981
BssAI RCCGGY 2 cut(s) 218, 382
BssECI CCNNGG 2 cut(s) 969, 981
BssMI GATC 7 cut(s) 23, 81, 415, 535, 570, 732, 1128
BssNI GRCGYC 1 cut(s) 246
BssT1I CCWWGG 2 cut(s) 969, 981
Bst2UI CCWGG 1 cut(s) 193
Bst4CI ACNGT 2 cut(s) 112, 1180
BstACI GRCGYC 1 cut(s) 246
BstAUI TGTACA 1 cut(s) 1149
BstC8I GCNNGC 4 cut(s) 12, 384, 783, 1123
BstDEI CTNAG 3 cut(s) 540, 594, 1074
BstDSI CCRYGG 1 cut(s) 981
BstF5I GGATG 2 cut(s) 104, 498
BstFNI CGCG 1 cut(s) 14
BstH2I RGCGCY 1 cut(s) 249
BstHHI GCGC 2 cut(s) 16, 248
BstKTI GATC 7 cut(s) 26, 84, 418, 538, 573, 735, 1131
BstMBI GATC 7 cut(s) 23, 81, 415, 535, 570, 732, 1128
BstMWI GCNNNNNNNGC 4 cut(s) 123, 252, 613, 947
BstNI CCWGG 1 cut(s) 193
BstSCI CCNGG 1 cut(s) 191
BstSLI GKGCMC 1 cut(s) 925
BstUI CGCG 1 cut(s) 14
BstV1I GCAGC 5 cut(s) 80, 682, 883, 1009, 1080
BstV2I GAAGAC 1 cut(s) 704
BstX2I RGATCY 3 cut(s) 23, 81, 535
BstXI CCANNNNNNTGG 2 cut(s) 509, 976
BstYI RGATCY 3 cut(s) 23, 81, 535
Bsu15I ATCGAT 1 cut(s) 507
BsuRI GGCC 1 cut(s) 980
BsuTUI ATCGAT 1 cut(s) 507
BtgI CCRYGG 1 cut(s) 981
BtsCI GGATG 2 cut(s) 104, 498
BtsI GCAGTG 1 cut(s) 277
BtsIMutI CAGTG 3 cut(s) 277, 722, 1185
Cac8I GCNNGC 4 cut(s) 12, 384, 783, 1123
CaiI CAGNNNCTG 1 cut(s) 896
CfoI GCGC 2 cut(s) 16, 248
Cfr10I RCCGGY 2 cut(s) 218, 382
Cfr13I GGNCC 2 cut(s) 907, 1171
ClaI ATCGAT 1 cut(s) 507
Csp6I GTAC 3 cut(s) 222, 1083, 1150
CviAII CATG 3 cut(s) 745, 982, 1126
CviQI GTAC 3 cut(s) 222, 1083, 1150
DdeI CTNAG 3 cut(s) 540, 594, 1074
DinI GGCGCC 1 cut(s) 247
DpnI GATC 7 cut(s) 25, 83, 417, 537, 572, 734, 1130
DpnII GATC 7 cut(s) 23, 81, 415, 535, 570, 732, 1128
DraIII CACNNNGTG 1 cut(s) 929
EaeI YGGCCR 1 cut(s) 978
EciI GGCGGA 2 cut(s) 205, 288
Ecl136II GAGCTC 1 cut(s) 616
Eco130I CCWWGG 2 cut(s) 969, 981
Eco24I GRGCYC 2 cut(s) 618, 811
Eco32I GATATC 1 cut(s) 742
Eco47I GGWCC 2 cut(s) 907, 1171
Eco53kI GAGCTC 1 cut(s) 616
Eco57I CTGAAG 5 cut(s) 106, 698, 807, 846, 957
EcoICRI GAGCTC 1 cut(s) 616
EcoO109I RGGNCCY 1 cut(s) 1171
EcoRII CCWGG 1 cut(s) 191
EcoRV GATATC 1 cut(s) 742
EcoT14I CCWWGG 2 cut(s) 969, 981
EcoT38I GRGCYC 2 cut(s) 618, 811
EgeI GGCGCC 1 cut(s) 247
EheI GGCGCC 1 cut(s) 247
ErhI CCWWGG 2 cut(s) 969, 981
FaeI CATG 3 cut(s) 748, 985, 1129
FaqI GGGAC 3 cut(s) 668, 987, 1157
FatI CATG 3 cut(s) 744, 981, 1125
FauI CCCGC 1 cut(s) 379
FblI GTMKAC 1 cut(s) 1110
Fnu4HI GCNGC 8 cut(s) 39, 69, 99, 102, 696, 897, 1023, 1094
FokI GGATG 2 cut(s) 91, 485
FriOI GRGCYC 2 cut(s) 618, 811
Fsp4HI GCNGC 8 cut(s) 39, 69, 99, 102, 696, 897, 1023, 1094
FspBI CTAG 2 cut(s) 951, 1122
GlaI GCGC 2 cut(s) 15, 247
GluI GCNGC 8 cut(s) 39, 69, 99, 102, 696, 897, 1023, 1094
GsaI CCCAGC 1 cut(s) 270
HaeII RGCGCY 1 cut(s) 249
HaeIII GGCC 1 cut(s) 980
HapII CCGG 5 cut(s) 27, 132, 219, 329, 383
HhaI GCGC 2 cut(s) 16, 248
Hin1I GRCGYC 1 cut(s) 246
Hin1II CATG 3 cut(s) 748, 985, 1129
Hin6I GCGC 2 cut(s) 14, 246
HinP1I GCGC 2 cut(s) 14, 246
HincII GTYRAC 2 cut(s) 1111, 1164
HindII GTYRAC 2 cut(s) 1111, 1164
HindIII AAGCTT 3 cut(s) 339, 1056, 1137
HinfI GANTC 9 cut(s) 4, 315, 321, 391, 454, 565, 814, 821, 887
HpaII CCGG 5 cut(s) 27, 132, 219, 329, 383
HphI GGTGA 2 cut(s) 136, 941
Hpy166II GTNNAC 3 cut(s) 923, 1111, 1164
Hpy188I TCNGA 8 cut(s) 78, 320, 471, 570, 597, 826, 892, 1101
Hpy188III TCNNGA 4 cut(s) 21, 632, 818, 1199
Hpy8I GTNNAC 3 cut(s) 923, 1111, 1164
HpyAV CCTTC 4 cut(s) 177, 193, 731, 821
HpyCH4III ACNGT 2 cut(s) 112, 1180
HpyCH4IV ACGT 4 cut(s) 492, 522, 796, 835
HpyCH4V TGCA 5 cut(s) 586, 698, 781, 899, 923
HpyF10VI GCNNNNNNNGC 4 cut(s) 123, 252, 613, 947
HpyF3I CTNAG 3 cut(s) 540, 594, 1074
HpySE526I ACGT 4 cut(s) 492, 522, 796, 835
Hsp92I GRCGYC 1 cut(s) 246
Hsp92II CATG 3 cut(s) 748, 985, 1129
HspAI GCGC 2 cut(s) 14, 246
KasI GGCGCC 1 cut(s) 245
KroI GCCGGC 1 cut(s) 382
KroNI GCCGGC 1 cut(s) 384
Kzo9I GATC 7 cut(s) 23, 81, 415, 535, 570, 732, 1128
LmnI GCTCC 1 cut(s) 1042
Lsp1109I GCAGC 5 cut(s) 80, 682, 883, 1009, 1080
LweI GCATC 2 cut(s) 113, 507
MaeI CTAG 2 cut(s) 951, 1122
MaeII ACGT 4 cut(s) 492, 522, 796, 835
MaeIII GTNAC 1 cut(s) 29
MalI GATC 7 cut(s) 25, 83, 417, 537, 572, 734, 1130
MbiI CCGCTC 1 cut(s) 355
MboI GATC 7 cut(s) 23, 81, 415, 535, 570, 732, 1128
MboII GAAGA 4 cut(s) 91, 458, 682, 704
MflI RGATCY 3 cut(s) 23, 81, 535
MhlI GDGCHC 4 cut(s) 618, 811, 925, 958
MlsI TGGCCA 1 cut(s) 980
MluCI AATT 3 cut(s) 365, 624, 1068
MluNI TGGCCA 1 cut(s) 980
Mly113I GGCGCC 1 cut(s) 246
MlyI GAGTC 1 cut(s) 830
Mox20I TGGCCA 1 cut(s) 980
MroNI GCCGGC 1 cut(s) 382
MroXI GAANNNNTTC 1 cut(s) 453
MscI TGGCCA 1 cut(s) 980
MseI TTAA 2 cut(s) 294, 525
MslI CAYNNNNRTG 1 cut(s) 507
Msp20I TGGCCA 1 cut(s) 980
MspA1I CMGCKG 1 cut(s) 71
MspI CCGG 5 cut(s) 27, 132, 219, 329, 383
MspR9I CCNGG 1 cut(s) 193
MvaI CCWGG 1 cut(s) 193
MvnI CGCG 1 cut(s) 14
MwoI GCNNNNNNNGC 4 cut(s) 123, 252, 613, 947
NaeI GCCGGC 1 cut(s) 384
NarI GGCGCC 1 cut(s) 246
NcoI CCATGG 1 cut(s) 981
NdeII GATC 7 cut(s) 23, 81, 415, 535, 570, 732, 1128
NgoMIV GCCGGC 1 cut(s) 382
NheI GCTAGC 1 cut(s) 1121
NlaIII CATG 3 cut(s) 748, 985, 1129
NlaIV GGNNCC 3 cut(s) 247, 537, 1173
PdiI GCCGGC 1 cut(s) 384
PdmI GAANNNNTTC 1 cut(s) 453
PfeI GAWTC 8 cut(s) 4, 315, 321, 391, 454, 565, 814, 887
PflFI GACNNNGTC 1 cut(s) 911
PkrI GCNGC 8 cut(s) 40, 70, 100, 103, 697, 898, 1024, 1095
PleI GAGTC 1 cut(s) 829
PluTI GGCGCC 1 cut(s) 249
PpsI GAGTC 1 cut(s) 829
PpuMI RGGWCCY 1 cut(s) 1171
PshBI ATTAAT 1 cut(s) 294
Psp124BI GAGCTC 1 cut(s) 618
Psp1406I AACGTT 1 cut(s) 492
Psp5II RGGWCCY 1 cut(s) 1171
Psp6I CCWGG 1 cut(s) 191
PspFI CCCAGC 1 cut(s) 266
PspGI CCWGG 1 cut(s) 191
PspN4I GGNNCC 3 cut(s) 247, 537, 1173
PspPI GGNCC 2 cut(s) 907, 1171
PspPPI RGGWCCY 1 cut(s) 1171
PsrI GAACNNNNNNTAC 2 cut(s) 856, 888
PstNI CAGNNNCTG 1 cut(s) 896
PsuI RGATCY 3 cut(s) 23, 81, 535
PsyI GACNNNGTC 1 cut(s) 911
PvuII CAGCTG 1 cut(s) 71
RsaI GTAC 3 cut(s) 223, 1084, 1151
RsaNI GTAC 3 cut(s) 222, 1083, 1150
RseI CAYNNNNRTG 1 cut(s) 507
SacI GAGCTC 1 cut(s) 618
SalI GTCGAC 1 cut(s) 1109
SaqAI TTAA 2 cut(s) 294, 525
SatI GCNGC 8 cut(s) 39, 69, 99, 102, 696, 897, 1023, 1094
Sau3AI GATC 7 cut(s) 23, 81, 415, 535, 570, 732, 1128
Sau96I GGNCC 2 cut(s) 907, 1171
SchI GAGTC 1 cut(s) 830
ScrFI CCNGG 1 cut(s) 193
SduI GDGCHC 4 cut(s) 618, 811, 925, 958
SfaNI GCATC 2 cut(s) 113, 507
SfoI GGCGCC 1 cut(s) 247
SinI GGWCC 2 cut(s) 907, 1171
SmiMI CAYNNNNRTG 1 cut(s) 507
SmlI CTYRAG 3 cut(s) 818, 998, 1134
SmoI CTYRAG 3 cut(s) 818, 998, 1134
Sse9I AATT 3 cut(s) 365, 624, 1068
SspDI GGCGCC 1 cut(s) 245
SspI AATATT 1 cut(s) 945
SspMI CTAG 2 cut(s) 951, 1122
SstI GAGCTC 1 cut(s) 618
StyD4I CCNGG 1 cut(s) 191
StyI CCWWGG 2 cut(s) 969, 981
TaaI ACNGT 2 cut(s) 112, 1180
TaiI ACGT 4 cut(s) 495, 525, 799, 838
TaqI TCGA 2 cut(s) 507, 1110
TasI AATT 3 cut(s) 365, 624, 1068
TatI WGTACW 1 cut(s) 1149
TauI GCSGC 3 cut(s) 41, 101, 104
TfiI GAWTC 8 cut(s) 4, 315, 321, 391, 454, 565, 814, 887
Tru1I TTAA 2 cut(s) 294, 525
Tru9I TTAA 2 cut(s) 294, 525
TscAI CASTG 3 cut(s) 277, 722, 1185
TseI GCWGC 5 cut(s) 68, 695, 896, 1022, 1093
TspDTI ATGAA 2 cut(s) 17, 422
TspGWI ACGGA 1 cut(s) 396
TspRI CASTG 3 cut(s) 277, 722, 1185
Tth111I GACNNNGTC 1 cut(s) 911
VneI GTGCAC 1 cut(s) 921
VpaK11BI GGWCC 2 cut(s) 907, 1171
VspI ATTAAT 1 cut(s) 294
XapI RAATTY 1 cut(s) 365
XmiI GTMKAC 1 cut(s) 1110
XmnI GAANNNNTTC 1 cut(s) 453
XspI CTAG 2 cut(s) 951, 1122
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.