RNA binding
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G56550 |
| fragaria_vesca | FvH4_1g06410 FvH4_6g32530 |
| malus_domestica | MD02G1067400.v1.1 MD09G1201500.v1.1 MD10G1246900.v1.1 MD15G1198100.v1.1 MD15G1199200.v1.1 MD17G1181600.v1.1 |
| prunus_persica | Prupe.3G057300_v2.0.a1 Prupe.3G057300_v2.0.a1 Prupe.7G218000_v2.0.a1 |
| pyrus_communis | pycom02g05340 pycom09g11820 pycom12654g00170 pycom15g17670 pycom17g19120 |
| rosa_chinensis | RchiOBHm_Chr2g0092151 RchiOBHm_Chr2g0140911 |
| rosa_laevigata | RLG00000016279 RLG00000019901 |
| rosa_multiflora | Rmu_sc0003848.1_g000009 Rmu_sc0013552.1_g000005 |
| rosa_roxburghii | Rroxscaffold_2G00104390 Rroxscaffold_2G00149430 |
| rosa_rugosa | Rorug02G0023200 Rorug02G0365600 |
| rosa_samantha | Rh2AG068900 Rh2AG417000 Rh2BG068200 Rh2BG426900 Rh2CG069400 Rh2CG403300 Rh2DG436500 |
| rosa_wichuraiana | Rw2G006340 Rw2G034120 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 3 cut(s) | 50, 61, 74 |
| AcuI | CTGAAG | 1 cut(s) | 47 |
| AfaI | GTAC | 1 cut(s) | 400 |
| AgsI | TTSAA | 6 cut(s) | 7, 92, 102, 213, 227, 335 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 244 |
| AluBI | AGCT | 2 cut(s) | 423, 449 |
| AluI | AGCT | 2 cut(s) | 423, 449 |
| AlwI | GGATC | 3 cut(s) | 50, 61, 74 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 371, 403 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 478 |
| AspS9I | GGNCC | 1 cut(s) | 218 |
| AvaII | GGWCC | 1 cut(s) | 218 |
| BamHI | GGATCC | 1 cut(s) | 66 |
| BbsI | GAAGAC | 1 cut(s) | 87 |
| BfaI | CTAG | 3 cut(s) | 314, 393, 500 |
| BglII | AGATCT | 2 cut(s) | 229, 337 |
| BmcAI | AGTACT | 1 cut(s) | 400 |
| Bme18I | GGWCC | 1 cut(s) | 218 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 244 |
| BmgT120I | GGNCC | 1 cut(s) | 218 |
| BmiI | GGNNCC | 1 cut(s) | 68 |
| BpiI | GAAGAC | 1 cut(s) | 87 |
| BpmI | CTGGAG | 1 cut(s) | 423 |
| Bse1I | ACTGG | 1 cut(s) | 406 |
| BseGI | GGATG | 1 cut(s) | 184 |
| BseNI | ACTGG | 1 cut(s) | 406 |
| Bsp143I | GATC | 6 cut(s) | 45, 55, 66, 229, 337, 415 |
| BspLI | GGNNCC | 1 cut(s) | 68 |
| BspPI | GGATC | 3 cut(s) | 50, 61, 74 |
| BsrI | ACTGG | 1 cut(s) | 406 |
| BssMI | GATC | 6 cut(s) | 45, 55, 66, 229, 337, 415 |
| Bst6I | CTCTTC | 1 cut(s) | 341 |
| BstF5I | GGATG | 1 cut(s) | 184 |
| BstKTI | GATC | 6 cut(s) | 48, 58, 69, 232, 340, 418 |
| BstMBI | GATC | 6 cut(s) | 45, 55, 66, 229, 337, 415 |
| BstV2I | GAAGAC | 1 cut(s) | 87 |
| BstX2I | RGATCY | 4 cut(s) | 55, 66, 229, 337 |
| BstYI | RGATCY | 4 cut(s) | 55, 66, 229, 337 |
| BtsCI | GGATG | 1 cut(s) | 184 |
| Cfr13I | GGNCC | 1 cut(s) | 218 |
| Csp6I | GTAC | 1 cut(s) | 399 |
| CviAII | CATG | 3 cut(s) | 43, 157, 244 |
| CviJI | RGCY | 4 cut(s) | 330, 423, 449, 503 |
| CviKI_1 | RGCY | 4 cut(s) | 330, 423, 449, 503 |
| CviQI | GTAC | 1 cut(s) | 399 |
| DpnI | GATC | 6 cut(s) | 47, 57, 68, 231, 339, 417 |
| DpnII | GATC | 6 cut(s) | 45, 55, 66, 229, 337, 415 |
| DraI | TTTAAA | 1 cut(s) | 358 |
| DriI | GACNNNNNGTC | 1 cut(s) | 244 |
| Eam1104I | CTCTTC | 1 cut(s) | 341 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 244 |
| EarI | CTCTTC | 1 cut(s) | 341 |
| Eco47I | GGWCC | 1 cut(s) | 218 |
| Eco57I | CTGAAG | 1 cut(s) | 47 |
| FaeI | CATG | 3 cut(s) | 46, 160, 247 |
| FaiI | YATR | 7 cut(s) | 44, 51, 158, 245, 285, 344, 372 |
| FatI | CATG | 3 cut(s) | 42, 156, 243 |
| FokI | GGATG | 1 cut(s) | 191 |
| FspBI | CTAG | 3 cut(s) | 314, 393, 500 |
| GsuI | CTGGAG | 1 cut(s) | 423 |
| Hin1II | CATG | 3 cut(s) | 46, 160, 247 |
| HinfI | GANTC | 2 cut(s) | 16, 22 |
| Hpy188I | TCNGA | 5 cut(s) | 21, 27, 115, 166, 238 |
| Hpy188III | TCNNGA | 3 cut(s) | 92, 224, 262 |
| HpyAV | CCTTC | 2 cut(s) | 281, 489 |
| Hsp92II | CATG | 3 cut(s) | 46, 160, 247 |
| Kzo9I | GATC | 6 cut(s) | 45, 55, 66, 229, 337, 415 |
| LmnI | GCTCC | 1 cut(s) | 374 |
| LpnPI | CCDG | 1 cut(s) | 387 |
| MaeI | CTAG | 3 cut(s) | 314, 393, 500 |
| MaeIII | GTNAC | 1 cut(s) | 246 |
| MalI | GATC | 6 cut(s) | 47, 57, 68, 231, 339, 417 |
| MboI | GATC | 6 cut(s) | 45, 55, 66, 229, 337, 415 |
| MflI | RGATCY | 4 cut(s) | 55, 66, 229, 337 |
| MmeI | TCCRAC | 1 cut(s) | 83 |
| MnlI | CCTC | 8 cut(s) | 169, 231, 251, 258, 263, 344, 398, 493 |
| MroXI | GAANNNNTTC | 1 cut(s) | 478 |
| MseI | TTAA | 2 cut(s) | 324, 357 |
| NdeII | GATC | 6 cut(s) | 45, 55, 66, 229, 337, 415 |
| NlaIII | CATG | 3 cut(s) | 46, 160, 247 |
| NlaIV | GGNNCC | 1 cut(s) | 68 |
| NmuCI | GTSAC | 1 cut(s) | 246 |
| PdmI | GAANNNNTTC | 1 cut(s) | 478 |
| PfeI | GAWTC | 2 cut(s) | 16, 22 |
| PspN4I | GGNNCC | 1 cut(s) | 68 |
| PspPI | GGNCC | 1 cut(s) | 218 |
| PsuI | RGATCY | 4 cut(s) | 55, 66, 229, 337 |
| RsaI | GTAC | 1 cut(s) | 400 |
| RsaNI | GTAC | 1 cut(s) | 399 |
| SaqAI | TTAA | 2 cut(s) | 324, 357 |
| Sau3AI | GATC | 6 cut(s) | 45, 55, 66, 229, 337, 415 |
| Sau96I | GGNCC | 1 cut(s) | 218 |
| ScaI | AGTACT | 1 cut(s) | 400 |
| SetI | ASST | 6 cut(s) | 223, 243, 255, 425, 451, 481 |
| SinI | GGWCC | 1 cut(s) | 218 |
| SspMI | CTAG | 3 cut(s) | 314, 393, 500 |
| TatI | WGTACW | 1 cut(s) | 398 |
| TfiI | GAWTC | 2 cut(s) | 16, 22 |
| Tru1I | TTAA | 2 cut(s) | 324, 357 |
| Tru9I | TTAA | 2 cut(s) | 324, 357 |
| TseFI | GTSAC | 1 cut(s) | 246 |
| Tsp45I | GTSAC | 1 cut(s) | 246 |
| TspDTI | ATGAA | 7 cut(s) | 29, 66, 132, 132, 192, 300, 359 |
| VpaK11BI | GGWCC | 1 cut(s) | 218 |
| XmnI | GAANNNNTTC | 1 cut(s) | 478 |
| XspI | CTAG | 3 cut(s) | 314, 393, 500 |
| ZrmI | AGTACT | 1 cut(s) | 400 |