Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0007239

Physical Location & Seq

Genomic Coordinates Reverse (-)

14305204 .. 14307591

Gene Structure 2388 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g22400.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2388 bp

ATGAGAAACTCTTCACTTCACCTAAGACATTATCACAACGCCATCACTTCTACCCACCAATCCCCTCACTTCTCCTCATTAGCTTCCTTTCTTCTCGAATCTCAATACCCATCTCTCGATACTCTTCCAACCCAAACCCTCCAAACCCAAAGGCGCGCATTGATCAATCACTTACAACTAGGCCTGTCACACAACCCCAAGACAGTCCATGCCCAGATTCTCGCATTGGGCTTTCGACACGATGTCTTTATTGCCAATCTTCTTCTTGACTCGTACAAGAAATCCGGGTACATTGTCTATGCACGGAAGGTGTTCGATACAATGCCTGAGAGGAGTTCGGTTACTTGGTCTTCCATGGTTTCGATGTACACCAAGCATGGGAAGAGTGAAGAGGCGTTGAAGGTGTTTTCGGAGTTTCATAGGAGTTCTGATGGGAGGCCAAATGAGTTTACGTTTCCTAGTGTTATTCGGGCTTGCACGCAATTCGGAGGGGCTGATCAAGGTTCCCAAGTGCATTGTTTTGTTGTCAAGACTGGTTTTGATAAGGAAGTCTTTGTGGGTACTTCTTTGATTGATTTTTATGTAAAGATGGGGGATATTGAGGAGGCGAGATTGATTTTTGACGGTTTGGAAGTTAAGAGTGCGGTGACTTGGACTATAGTTATAGCAGGGTATGCGAAAAGTGGGAAAAGTGAGGCGGCTTTGAAGTTGTTTTATCAGATGAGAGACACTGATGTTGTTCCGGATAAATATGTGCTCTCTGCTCTTCTGACTGCATGTTCTGCCCTCAAGTTCATTGGAGGCGGTAAGCAGATCCATGCTTATGTGCTGAGAAGGGGAACAGAAATGGATGTATCGGTGGTTAATGTATTAGTAGATTTCTATACGAAGTGCGGTCAAGTCCTGGCAGGACAGAAATTATTTGATAAGGTGGTGGATAGGGACCTTATTTCATGGACCACAATGATAGCAGGGTATACGCAAAACTCGATGCACGTGGAGGCTGTTAAGCTATTTTCTGAAATGACCAGATTGGGTTGGAAGCCAGACGGATATGGGTGTAGTAGCATTCTTACTTCATGTGGTTCACTTGAGGCTCTGAAACATGGGAGGGAAGTGCATGCTTATACTGTCAGGGTTGATCTTGTGTACGAATATTATGTGAAGAACAGTTTGATTGATATGTATGCAAAATGTGATTCACTGACTGATGCAAGAAGAGTTTTCAATTCCATGACTAATCATAATGTGGTCTCTTACAATGCAATGATTGAAGGATACTCAAGACAGGAAAAGTTGGCTGAAGCTCTGGATCTTTTCAATCTGATGAGGCTTAGATCGGTCCAGCCTAGTATCTTGGCGTTCGTCAGTATTCTTGGTGTCTCAGCTGCTTCATTGACCTTGGAATTAAGCAAGCAAGTACATGGGCTGATCACCAAGTACGGGTTATCCTTGGATATTTTTGCTGGCAGCGCTCTCATAGATGTTTATTCCAAGTGTTCATGTACTCGCGAAGCTAAACTTGTTTTCGAGGAGATGAATGAAAAAGACATAGTAGTATGGAATGCAATGTTTAGCGGATATGCCCAACAGCAGGAAAGTGAAGAGACTCTTAAGTTGTACTCTGAACTACAGGTATCGAGACAAATCCCTAATGAGTTTACTTTTGCTTCTGTAATCTCAGCAGCCAGCAGCCTAGCAAGTATCCAGCATGGGCAACAGTTCCACAGTCAGATCATTAAAGTTGGTCTTGAGAATGATCCTTTTGTCACAAATGCCCTTGTGGATATGTACTCCAAGTGTGGAAGCATTGAAGAGGCTCACAAACTATTTGACTCCAAAACTTTGAAAGATGTTGCTTGTTGGAATTCCATTATCTCAACATATGCTCATCATGGAGAAGCAGAAAACGCTCTCCTGATGTTTGAAAGAATGATGAATGACGGCATAAAACCCAACTATATCACATTTGTGGGGGTGCTATCAGCTTGTAGCCATGCAGGCCTTGTTGAAGATGGACTTCGTCACTTTGAATCAATGTCTTGGTTTGGAATTGAACCAGGGATAGACCATTATTCTTGCATAGTTTCTCTCCTGGGCCGTGCCGGTAAATTATATGAAGCCAAGGAGGTCATTGAGAAAATGCCAATGAAGCCTGCAGCAATTCTATGGAGGAGTTTACTGAGTGCATGTACAGCTGCAGGTAATGTTGAATTGGGGATCTATGCAGCAGAGATGGCAATTTTGAGTGATCCATTGGATAGTGGATCGTATATCTTGCTTTCAAATATTTATGCAGCCAAAGGTATGTGGGATGATGCCAAAACGGTTAGGGAAAAAATGGAGTACAATGGTGTAGTGAAAGAAACTGGACGTAGTTGGGTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

796

Amino Acids

88.65

Weight (kDa)

6.37

Isoelectric Point (pI)

43.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	112 - 159	7.3e-07	PPR repeat family
PPR	PF01535	114 - 141	2.1e-06	PPR repeat
PPR_2	PF13041	214 - 260	5e-10	PPR repeat family
PPR	PF01535	216 - 243	7.9e-07	PPR repeat
PPR_2	PF13041	315 - 361	1.1e-08	PPR repeat family
PPR	PF01535	317 - 346	5.8e-07	PPR repeat
PPR_2	PF13041	416 - 458	5.6e-10	PPR repeat family
PPR	PF01535	418 - 446	1.6e-06	PPR repeat
PPR_2	PF13041	516 - 562	9.4e-08	PPR repeat family
PPR_2	PF13041	617 - 665	5.8e-09	PPR repeat family
E_motif	PF20431	736 - 795	6.2e-13	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007239)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G39530
fragaria_vesca	FvH4_1g22400 FvH4_1g22550
malus_domestica	MD01G1019600.v1.1
prunus_persica	Prupe.6G172600_v2.0.a1
pyrus_communis	pycom01g04910
rosa_chinensis	RchiOBHm_Chr2g0116541
rosa_laevigata	RLG00000018286
rosa_multiflora	Rmu_sc0001287.1_g000020 Rmu_sc0001287.1_g000021 Rmu_sc0003255.1_g000001 Rmu_sc0003255.1_g000019 Rmu_sc0004191.1_g000031
rosa_roxburghii	Rroxscaffold_2G00127080 Rroxscaffold_2G00127100
rosa_rugosa	Rorug02G0207400 Rorug02G0207500
rosa_samantha	Rh2AG262400 Rh2BG273600 Rh2BG273900 Rh2BG274000 Rh2DG265300 Rh2DG270600 Rh2DG289100
rosa_wichuraiana	Rw2G020660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2192
AccI	GTMKAC	1 cut(s)	977
AccII	CGCG	2 cut(s)	156, 1512
AccIII	TCCGGA	1 cut(s)	742
AciI	CCGC	5 cut(s)	644, 698, 804, 894, 1578
AclWI	GGATC	6 cut(s)	808, 1320, 1754, 2228, 2246, 2275
AcsI	RAATTY	1 cut(s)	1867
AcuI	CTGAAG	1 cut(s)	1323
AcvI	CACGTG	1 cut(s)	997
AfeI	AGCGCT	1 cut(s)	1474
AfiI	CCNNNNNNNGG	3 cut(s)	378, 1443, 1594
AflII	CTTAAG	1 cut(s)	1613
AhdI	GACNNNNNGTC	1 cut(s)	242
AjnI	CCWGG	3 cut(s)	903, 2059, 2094
AleI	CACNNNNGTG	1 cut(s)	1970
AluBI	AGCT	7 cut(s)	83, 1012, 1307, 1388, 1517, 1988, 2198
AluI	AGCT	7 cut(s)	83, 1012, 1307, 1388, 1517, 1988, 2198
Alw21I	GWGCWC	1 cut(s)	759
Alw26I	GTCTC	5 cut(s)	720, 1258, 1387, 1601, 1636
AlwI	GGATC	6 cut(s)	808, 1320, 1754, 2228, 2246, 2275
Aor13HI	TCCGGA	1 cut(s)	742
Aor51HI	AGCGCT	1 cut(s)	1474
AoxI	GGCC	4 cut(s)	181, 437, 2002, 2098
ApeKI	GCWGC	8 cut(s)	1388, 1470, 1685, 1692, 2159, 2198, 2228, 2297
ApoI	RAATTY	1 cut(s)	1867
Asp700I	GAANNNNTTC	2 cut(s)	10, 311
AspLEI	GCGC	3 cut(s)	156, 158, 1475
AspS9I	GGNCC	4 cut(s)	943, 957, 1342, 2098
AsuC2I	CCSGG	1 cut(s)	286
AsuHPI	GGTGA	3 cut(s)	11, 658, 1426
AvaII	GGWCC	3 cut(s)	943, 957, 1342
BbrPI	CACGTG	1 cut(s)	997
BbsI	GAAGAC	1 cut(s)	342
Bbv12I	GWGCWC	1 cut(s)	759
BbvI	GCAGC	8 cut(s)	1375, 1482, 1697, 1704, 2171, 2185, 2240, 2309
BccI	CCATC	6 cut(s)	50, 118, 425, 583, 2009, 2230
BceAI	ACGGC	2 cut(s)	1960, 2085
BcgI	CGANNNNNNTGC	2 cut(s)	466, 500
BciT130I	CCWGG	3 cut(s)	905, 2061, 2096
BciVI	GTATCC	2 cut(s)	1271, 1715
BclI	TGATCA	3 cut(s)	162, 496, 1431
BcnI	CCSGG	1 cut(s)	286
BcoDI	GTCTC	5 cut(s)	720, 1258, 1387, 1601, 1636
BfaI	CTAG	4 cut(s)	179, 459, 1350, 1697
BfmI	CTRYAG	4 cut(s)	657, 1631, 2157, 2199
BfoI	RGCGCY	1 cut(s)	1476
BfrI	CTTAAG	1 cut(s)	1613
BfuAI	ACCTGC	1 cut(s)	2192
BfuI	GTATCC	2 cut(s)	1271, 1715
BglI	GCCNNNNNGGC	1 cut(s)	2001
BisI	GCNGC	9 cut(s)	699, 1389, 1471, 1686, 1693, 2160, 2199, 2229, 2298
BlsI	GCNGC	9 cut(s)	700, 1390, 1472, 1687, 1694, 2161, 2200, 2230, 2299
Bme1390I	CCNGG	4 cut(s)	286, 905, 2061, 2096
Bme18I	GGWCC	3 cut(s)	943, 957, 1342
BmeRI	GACNNNNNGTC	1 cut(s)	242
BmgT120I	GGNCC	4 cut(s)	943, 957, 1342, 2098
BmiI	GGNNCC	2 cut(s)	505, 944
BmrFI	CCNGG	4 cut(s)	286, 905, 2061, 2096
BmsI	GCATC	3 cut(s)	981, 1201, 2308
BpiI	GAAGAC	1 cut(s)	342
BpuEI	CTTGAG	4 cut(s)	773, 1112, 1267, 1772
BpuMI	CCSGG	1 cut(s)	286
BsaAI	YACGTR	1 cut(s)	997
BsaI	GGTCTC	1 cut(s)	1258
BsaJI	CCNNGG	6 cut(s)	354, 1401, 1452, 2060, 2095, 2124
BsaWI	WCCGGW	1 cut(s)	742
Bsc4I	CCNNNNNNNGG	3 cut(s)	378, 1443, 1594
Bse118I	RCCGGY	1 cut(s)	2105
Bse1I	ACTGG	2 cut(s)	538, 2374
Bse3DI	GCAATG	2 cut(s)	1272, 1575
BseAI	TCCGGA	1 cut(s)	742
BseBI	CCWGG	3 cut(s)	905, 2061, 2096
BseDI	CCNNGG	6 cut(s)	354, 1401, 1452, 2060, 2095, 2124
BseGI	GGATG	2 cut(s)	856, 2320
BseLI	CCNNNNNNNGG	3 cut(s)	378, 1443, 1594
BseMI	GCAATG	2 cut(s)	1272, 1575
BseMII	CTCAG	5 cut(s)	318, 821, 1398, 1695, 2174
BseNI	ACTGG	2 cut(s)	538, 2374
BsePI	GCGCGC	1 cut(s)	154
BseRI	GAGGAG	5 cut(s)	64, 346, 617, 1547, 2188
BseXI	GCAGC	8 cut(s)	1375, 1482, 1697, 1704, 2171, 2185, 2240, 2309
Bsh1236I	CGCG	2 cut(s)	156, 1512
BshFI	GGCC	4 cut(s)	183, 439, 2004, 2100
BsiHKAI	GWGCWC	1 cut(s)	759
BsiSI	CCGG	3 cut(s)	285, 743, 2106
BslFI	GGGAC	1 cut(s)	956
BslI	CCNNNNNNNGG	3 cut(s)	378, 1443, 1594
BsmAI	GTCTC	5 cut(s)	720, 1258, 1387, 1601, 1636
BsmFI	GGGAC	1 cut(s)	956
BsmI	GAATGC	2 cut(s)	1068, 1570
BsnI	GGCC	4 cut(s)	183, 439, 2004, 2100
Bso31I	GGTCTC	1 cut(s)	1258
Bsp1286I	GDGCHC	1 cut(s)	759
Bsp13I	TCCGGA	1 cut(s)	742
Bsp1407I	TGTACA	2 cut(s)	366, 2192
Bsp19I	CCATGG	1 cut(s)	354
Bsp68I	TCGCGA	1 cut(s)	1512
BspACI	CCGC	5 cut(s)	644, 698, 804, 894, 1578
BspANI	GGCC	4 cut(s)	183, 439, 2004, 2100
BspCNI	CTCAG	5 cut(s)	319, 822, 1397, 1694, 2175
BspEI	TCCGGA	1 cut(s)	742
BspFNI	CGCG	2 cut(s)	156, 1512
BspLI	GGNNCC	2 cut(s)	505, 944
BspMAI	CTGCAG	2 cut(s)	2161, 2203
BspMI	ACCTGC	1 cut(s)	2192
BspPI	GGATC	6 cut(s)	808, 1320, 1754, 2228, 2246, 2275
BspQI	GCTCTTC	1 cut(s)	771
BspTI	CTTAAG	1 cut(s)	1613
BspTNI	GGTCTC	1 cut(s)	1258
BsrDI	GCAATG	2 cut(s)	1272, 1575
BsrFI	RCCGGY	1 cut(s)	2105
BsrGI	TGTACA	2 cut(s)	366, 2192
BsrI	ACTGG	2 cut(s)	538, 2374
BssAI	RCCGGY	1 cut(s)	2105
BssECI	CCNNGG	6 cut(s)	354, 1401, 1452, 2060, 2095, 2124
BssHII	GCGCGC	1 cut(s)	154
BssNAI	GTATAC	1 cut(s)	978
BssT1I	CCWWGG	4 cut(s)	354, 1401, 1452, 2124
Bst1107I	GTATAC	1 cut(s)	978
Bst2UI	CCWGG	3 cut(s)	905, 2061, 2096
Bst4CI	ACNGT	7 cut(s)	205, 626, 1132, 1172, 1722, 1730, 2329
Bst6I	CTCTTC	8 cut(s)	16, 129, 377, 384, 771, 1213, 1599, 1809
BstAFI	CTTAAG	1 cut(s)	1613
BstAPI	GCANNNNNTGC	2 cut(s)	674, 782
BstAUI	TGTACA	2 cut(s)	366, 2192
BstBAI	YACGTR	1 cut(s)	997
BstC8I	GCNNGC	9 cut(s)	156, 475, 479, 1122, 1415, 1468, 1690, 2002, 2157
BstDEI	CTNAG	7 cut(s)	23, 327, 830, 1334, 1384, 1681, 2183
BstDSI	CCRYGG	1 cut(s)	354
BstF5I	GGATG	2 cut(s)	856, 2320
BstFNI	CGCG	2 cut(s)	156, 1512
BstH2I	RGCGCY	1 cut(s)	1476
BstHHI	GCGC	3 cut(s)	156, 158, 1475
BstMAI	GTCTC	5 cut(s)	720, 1258, 1387, 1601, 1636
BstMWI	GCNNNNNNNGC	8 cut(s)	674, 782, 1472, 1910, 2001, 2152, 2195, 2237
BstNI	CCWGG	3 cut(s)	905, 2061, 2096
BstNSI	RCATGY	3 cut(s)	780, 1124, 2193
BstSCI	CCNGG	4 cut(s)	284, 903, 2059, 2094
BstSFI	CTRYAG	4 cut(s)	657, 1631, 2157, 2199
BstUI	CGCG	2 cut(s)	156, 1512
BstV1I	GCAGC	8 cut(s)	1375, 1482, 1697, 1704, 2171, 2185, 2240, 2309
BstV2I	GAAGAC	1 cut(s)	342
BstX2I	RGATCY	3 cut(s)	813, 1312, 2220
BstYI	RGATCY	3 cut(s)	813, 1312, 2220
BstZ17I	GTATAC	1 cut(s)	978
BsuI	GTATCC	2 cut(s)	1271, 1715
BsuRI	GGCC	4 cut(s)	183, 439, 2004, 2100
BtgI	CCRYGG	1 cut(s)	354
BtsCI	GGATG	2 cut(s)	856, 2320
BtsIMutI	CAGTG	2 cut(s)	729, 1202
BtuMI	TCGCGA	1 cut(s)	1512
BveI	ACCTGC	1 cut(s)	2192
Cac8I	GCNNGC	9 cut(s)	156, 475, 479, 1122, 1415, 1468, 1690, 2002, 2157
CfoI	GCGC	3 cut(s)	156, 158, 1475
Cfr10I	RCCGGY	1 cut(s)	2105
Cfr13I	GGNCC	4 cut(s)	943, 957, 1342, 2098
DdeI	CTNAG	7 cut(s)	23, 327, 830, 1334, 1384, 1681, 2183
DriI	GACNNNNNGTC	1 cut(s)	242
Eam1104I	CTCTTC	8 cut(s)	16, 129, 377, 384, 771, 1213, 1599, 1809
Eam1105I	GACNNNNNGTC	1 cut(s)	242
EarI	CTCTTC	8 cut(s)	16, 129, 377, 384, 771, 1213, 1599, 1809
Eco130I	CCWWGG	4 cut(s)	354, 1401, 1452, 2124
Eco147I	AGGCCT	2 cut(s)	183, 2004
Eco31I	GGTCTC	1 cut(s)	1258
Eco47I	GGWCC	3 cut(s)	943, 957, 1342
Eco47III	AGCGCT	1 cut(s)	1474
Eco57I	CTGAAG	1 cut(s)	1323
Eco72I	CACGTG	1 cut(s)	997
EcoO109I	RGGNCCY	1 cut(s)	943
EcoRI	GAATTC	1 cut(s)	1867
EcoRII	CCWGG	3 cut(s)	903, 2059, 2094
EcoT14I	CCWWGG	4 cut(s)	354, 1401, 1452, 2124
ErhI	CCWWGG	4 cut(s)	354, 1401, 1452, 2124
FaqI	GGGAC	1 cut(s)	956
FauNDI	CATATG	1 cut(s)	1885
FbaI	TGATCA	3 cut(s)	162, 496, 1431
FblI	GTMKAC	1 cut(s)	977
Fnu4HI	GCNGC	9 cut(s)	699, 1389, 1471, 1686, 1693, 2160, 2199, 2229, 2298
FokI	GGATG	2 cut(s)	863, 2327
Fsp4HI	GCNGC	9 cut(s)	699, 1389, 1471, 1686, 1693, 2160, 2199, 2229, 2298
FspBI	CTAG	4 cut(s)	179, 459, 1350, 1697
GlaI	GCGC	3 cut(s)	155, 157, 1474
GluI	GCNGC	9 cut(s)	699, 1389, 1471, 1686, 1693, 2160, 2199, 2229, 2298
HaeII	RGCGCY	1 cut(s)	1476
HaeIII	GGCC	4 cut(s)	183, 439, 2004, 2100
HapII	CCGG	3 cut(s)	285, 743, 2106
HhaI	GCGC	3 cut(s)	156, 158, 1475
Hin6I	GCGC	3 cut(s)	154, 156, 1473
HinP1I	GCGC	3 cut(s)	154, 156, 1473
HinfI	GANTC	7 cut(s)	98, 217, 269, 1199, 1609, 1835, 2033
HpaII	CCGG	3 cut(s)	285, 743, 2106
HphI	GGTGA	3 cut(s)	11, 658, 1426
Hpy166II	GTNNAC	7 cut(s)	369, 450, 978, 1088, 1150, 1662, 2180
Hpy8I	GTNNAC	7 cut(s)	369, 450, 978, 1088, 1150, 1662, 2180
HpyAV	CCTTC	4 cut(s)	301, 394, 828, 1268
HpyCH4III	ACNGT	7 cut(s)	205, 626, 1132, 1172, 1722, 1730, 2329
HpyCH4IV	ACGT	3 cut(s)	452, 996, 2374
HpyF10VI	GCNNNNNNNGC	8 cut(s)	674, 782, 1472, 1910, 2001, 2152, 2195, 2237
HpyF3I	CTNAG	7 cut(s)	23, 327, 830, 1334, 1384, 1681, 2183
HpySE526I	ACGT	3 cut(s)	452, 996, 2374
HspAI	GCGC	3 cut(s)	154, 156, 1473
Kpn2I	TCCGGA	1 cut(s)	742
Ksp22I	TGATCA	3 cut(s)	162, 496, 1431
LguI	GCTCTTC	1 cut(s)	771
Lsp1109I	GCAGC	8 cut(s)	1375, 1482, 1697, 1704, 2171, 2185, 2240, 2309
LweI	GCATC	3 cut(s)	981, 1201, 2308
MaeI	CTAG	4 cut(s)	179, 459, 1350, 1697
MaeII	ACGT	3 cut(s)	452, 996, 2374
MaeIII	GTNAC	5 cut(s)	186, 340, 646, 1768, 2024
MflI	RGATCY	3 cut(s)	813, 1312, 2220
MhlI	GDGCHC	1 cut(s)	759
MlyI	GAGTC	3 cut(s)	263, 1603, 1829
MmeI	TCCRAC	3 cut(s)	152, 1019, 1844
MroI	TCCGGA	1 cut(s)	742
MroXI	GAANNNNTTC	2 cut(s)	10, 311
MseI	TTAA	6 cut(s)	636, 864, 1008, 1409, 1614, 1740
MslI	CAYNNNNRTG	2 cut(s)	822, 1970
MspA1I	CMGCKG	2 cut(s)	1388, 2198
MspCI	CTTAAG	1 cut(s)	1613
MspI	CCGG	3 cut(s)	285, 743, 2106
MspR9I	CCNGG	4 cut(s)	286, 905, 2061, 2096
Mva1269I	GAATGC	2 cut(s)	1068, 1570
MvaI	CCWGG	3 cut(s)	905, 2061, 2096
MvnI	CGCG	2 cut(s)	156, 1512
MwoI	GCNNNNNNNGC	8 cut(s)	674, 782, 1472, 1910, 2001, 2152, 2195, 2237
NciI	CCSGG	1 cut(s)	286
NcoI	CCATGG	1 cut(s)	354
NdeI	CATATG	1 cut(s)	1885
NlaIV	GGNNCC	2 cut(s)	505, 944
NmuCI	GTSAC	4 cut(s)	186, 646, 1768, 2024
NruI	TCGCGA	1 cut(s)	1512
NspI	RCATGY	3 cut(s)	780, 1124, 2193
OliI	CACNNNNGTG	1 cut(s)	1970
PaeI	GCATGC	1 cut(s)	1124
PauI	GCGCGC	1 cut(s)	154
PceI	AGGCCT	2 cut(s)	183, 2004
PciSI	GCTCTTC	1 cut(s)	771
PcsI	WCGNNNNNNNCGW	1 cut(s)	986
PctI	GAATGC	2 cut(s)	1068, 1570
PdmI	GAANNNNTTC	2 cut(s)	10, 311
PfeI	GAWTC	4 cut(s)	98, 217, 1199, 2033
PflFI	GACNNNGTC	1 cut(s)	2022
PkrI	GCNGC	9 cut(s)	700, 1390, 1472, 1687, 1694, 2161, 2200, 2230, 2299
PleI	GAGTC	3 cut(s)	263, 1603, 1829
PmaCI	CACGTG	1 cut(s)	997
PmlI	CACGTG	1 cut(s)	997
PpsI	GAGTC	3 cut(s)	263, 1603, 1829
Ppu21I	YACGTR	1 cut(s)	997
PpuMI	RGGWCCY	1 cut(s)	943
Psp5II	RGGWCCY	1 cut(s)	943
Psp6I	CCWGG	3 cut(s)	903, 2059, 2094
PspCI	CACGTG	1 cut(s)	997
PspGI	CCWGG	3 cut(s)	903, 2059, 2094
PspN4I	GGNNCC	2 cut(s)	505, 944
PspPI	GGNCC	4 cut(s)	943, 957, 1342, 2098
PspPPI	RGGWCCY	1 cut(s)	943
PstI	CTGCAG	2 cut(s)	2161, 2203
PsuI	RGATCY	3 cut(s)	813, 1312, 2220
PsyI	GACNNNGTC	1 cut(s)	2022
PteI	GCGCGC	1 cut(s)	154
PvuII	CAGCTG	2 cut(s)	1388, 2198
RruI	TCGCGA	1 cut(s)	1512
RseI	CAYNNNNRTG	2 cut(s)	822, 1970
SapI	GCTCTTC	1 cut(s)	771
SaqAI	TTAA	6 cut(s)	636, 864, 1008, 1409, 1614, 1740
SatI	GCNGC	9 cut(s)	699, 1389, 1471, 1686, 1693, 2160, 2199, 2229, 2298
Sau96I	GGNCC	4 cut(s)	943, 957, 1342, 2098
SchI	GAGTC	3 cut(s)	263, 1603, 1829
ScrFI	CCNGG	4 cut(s)	286, 905, 2061, 2096
SduI	GDGCHC	1 cut(s)	759
SfaNI	GCATC	3 cut(s)	981, 1201, 2308
SfcI	CTRYAG	4 cut(s)	657, 1631, 2157, 2199
SinI	GGWCC	3 cut(s)	943, 957, 1342
SmiMI	CAYNNNNRTG	2 cut(s)	822, 1970
SmlI	CTYRAG	5 cut(s)	788, 1091, 1282, 1613, 1751
SmoI	CTYRAG	5 cut(s)	788, 1091, 1282, 1613, 1751
SphI	GCATGC	1 cut(s)	1124
SseBI	AGGCCT	2 cut(s)	183, 2004
SsiI	CCGC	5 cut(s)	644, 698, 804, 894, 1578
SspI	AATATT	2 cut(s)	1157, 2290
SspMI	CTAG	4 cut(s)	179, 459, 1350, 1697
StuI	AGGCCT	2 cut(s)	183, 2004
StyD4I	CCNGG	4 cut(s)	284, 903, 2059, 2094
StyI	CCWWGG	4 cut(s)	354, 1401, 1452, 2124
TaaI	ACNGT	7 cut(s)	205, 626, 1132, 1172, 1722, 1730, 2329
TaiI	ACGT	3 cut(s)	455, 999, 2377
TaqI	TCGA	8 cut(s)	96, 117, 235, 315, 362, 989, 1530, 1640
TaqII	GACCGA	1 cut(s)	1330
TatI	WGTACW	7 cut(s)	366, 1420, 1505, 1620, 1791, 2192, 2346
TauI	GCSGC	1 cut(s)	701
TfiI	GAWTC	4 cut(s)	98, 217, 1199, 2033
Tru1I	TTAA	6 cut(s)	636, 864, 1008, 1409, 1614, 1740
Tru9I	TTAA	6 cut(s)	636, 864, 1008, 1409, 1614, 1740
TscAI	CASTG	2 cut(s)	736, 1209
TseFI	GTSAC	4 cut(s)	186, 646, 1768, 2024
TseI	GCWGC	8 cut(s)	1388, 1470, 1685, 1692, 2159, 2198, 2228, 2297
Tsp45I	GTSAC	4 cut(s)	186, 646, 1768, 2024
TspGWI	ACGGA	2 cut(s)	319, 1065
TspRI	CASTG	2 cut(s)	736, 1209
Tth111I	GACNNNGTC	1 cut(s)	2022
Vha464I	CTTAAG	1 cut(s)	1613
VpaK11BI	GGWCC	3 cut(s)	943, 957, 1342
XapI	RAATTY	1 cut(s)	1867
XceI	RCATGY	3 cut(s)	780, 1124, 2193
XmiI	GTMKAC	1 cut(s)	977
XmnI	GAANNNNTTC	2 cut(s)	10, 311
XspI	CTAG	4 cut(s)	179, 459, 1350, 1697

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.