Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0007239

Physical Location & Seq

Genomic Coordinates Forward (+)

33891961 .. 33894554

Gene Structure 2594 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG289100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1800 bp

ATGGGTGATATAGAAGAGGCGAGATTGATTTTTGATGGTTTAAAAGTTAAAAGTGCTGTTACTTGGACTATTGTTATAGCAGGGTATGCGAAAAGTGGAAGAAGTGAAGCGGCTTTGAAGTCGTTTTATCATATGAAAGACACTGATGTTCTTCCTGATAAATATGTGCTCTCTGCTCTTCTGACCGCATGTTCTGCCCTCAAGTTCATTGGAGGCGGCAAGCAAATTCATGCTCATGTGCTGAGAAGGGGAACAGAAATGGATGTTTCAGTGGTTAATGTACTAATAGATTTCTACACAAAGTGCGGTCAAGTCCAGGCAGGACATAAACTATTTGATAAGATGGTAGATAAGGACCTTATTTCATGGACCACAATGATAGCAGGGTACATGCAAAACTCGATGCACATGGAGGCCGTTAAGCTATTTTCTGAAATGACCAGAATGGGTTGGAAGGCAGATGGATATGGGTGCAGTAGCATTCTTACTTCATGTGGTTCACTTGAGGCTCTGAAACATGGGAGAGAAGTGCACGCTTATACTATCAGGGTTGATCTTGTCTACGAATATTATGTGAAGAATAGTTTGATTGATATGTATGCAAAATGTGATTCCCTGACTGATGCAAGAAGAGTTTTTGATTCCATGGCTGATCATAATGTGGTCTCTTACAATGCAATGATTGAAGGATACTCAAGGCAGGATAAGGTGGCTGAAGCTCTGGATCTTTTCAATCTTATGAGGCTTAAATTGGTCCAGCCTAGTATCTTGACATTTGTCAGTCTTCTTGGTGTCTCAGCTGCTTTATTGACCTTGGAATTAAGCAAGCAAATCCATGGGCTGACCACCAAGTACGGGTTATCTTTGGATATTTTTGCTGGCAGTGCTCTCATTGATGTTTATTCCAAGTGTTCATGTATTCGCGAAGCTAAACTTGTATTCGAGGAGATGAATGAAAAAGACATAGTTGTGTGGAATTCAATGTTCTGTGGATACGCCCAACAGCTGGAAAGTGAAGAGGCTCTTAAGTTGTACTCAGAACTACAATTATCAAGACAAAATCCTAATGAGTTTACTTTTGCTTCCCTAATCTCAGCAGCCAGCAACCTAGCAAGTATCCAACATGGTCAACAGTTCCATAGCCAAATCTTTAAAATTGGTCTTGAGAATGATCCTTTTGTCACAAATGCCCTTGTGGATATGTATTCCAAGTGTGGAAGCATTAAAGAGGCTCGCAAAATATTTGATTCCAAAACTTTGAAAGATGTTGCCTGTTGGAATTCCATTATCTCAACGTATGCACATCATGGAGAAGCAGAAAAAGCTCTTCTGATGTTTGAAAAAATGATGAATGAGGGGATAAAACCCAACTATATCACCTTTGTGGGGGTGCTATCAGCTTGTAGCCATGCAGGCCTTGTGGAAGATGGACTTGGTCACTTTGAATCAATGCCTTGGTTTGGAATCGAACCAGGGATAGAACATTATTCTTGCATAGTTTCTCTCTTGGGCCGCGCCGGTAAATTATCTGAAGCTAAGGAATTTATTGAGAAAATGCCAATGAAACCACCAGCAATGATATGGAGGAGTTTACTCAGTTCATGTACAGCTGCAGGTAATGTTGAATTGGGGATCTACGCAGCAGAGATGGCAATTTTGAGTGATCCAATGGATAGTGGATCGTATATCTTACTTTCAAATATGTATGCATCCGAAGGTATGTGGGATGATGTCAAGAGAGTGAGGAAAAAAATGGAGTATAATGGTGTAGTGAAAGAAACCGGACGTAGTTGGTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

599

Amino Acids

66.79

Weight (kDa)

6.01

Isoelectric Point (pI)

40.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	18 - 64	9.5e-09	PPR repeat family
PPR_2	PF13041	119 - 165	2.3e-08	PPR repeat family
PPR	PF01535	121 - 150	5.7e-07	PPR repeat
PPR_2	PF13041	220 - 263	2.9e-11	PPR repeat family
PPR_1	PF12854	220 - 248	9.3e-06	PPR repeat
PPR_3	PF13812	220 - 265	9.8e-06	Pentatricopeptide repeat domain
PPR	PF01535	222 - 248	1.3e-06	PPR repeat
PPR_2	PF13041	320 - 366	2.3e-09	PPR repeat family
PPR_2	PF13041	421 - 469	2.2e-10	PPR repeat family
PPR_3	PF13812	422 - 468	9.6e-06	Pentatricopeptide repeat domain
PPR	PF01535	425 - 454	4.2e-06	PPR repeat
E_motif	PF20431	540 - 598	2.5e-14	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007239)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G39530
fragaria_vesca	FvH4_1g22400 FvH4_1g22550
malus_domestica	MD01G1019600.v1.1
prunus_persica	Prupe.6G172600_v2.0.a1
pyrus_communis	pycom01g04910
rosa_chinensis	RchiOBHm_Chr2g0116541
rosa_laevigata	RLG00000018286
rosa_multiflora	Rmu_sc0001287.1_g000020 Rmu_sc0001287.1_g000021 Rmu_sc0003255.1_g000001 Rmu_sc0003255.1_g000019 Rmu_sc0004191.1_g000031
rosa_roxburghii	Rroxscaffold_2G00127080 Rroxscaffold_2G00127100
rosa_rugosa	Rorug02G0207400 Rorug02G0207500
rosa_samantha	Rh2AG262400 Rh2BG273600 Rh2BG273900 Rh2BG274000 Rh2DG265300 Rh2DG270600 Rh2DG289100
rosa_wichuraiana	Rw2G020660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1604
AccB7I	CCANNNNNTGG	1 cut(s)	1006
AccI	GTMKAC	1 cut(s)	561
AccII	CGCG	2 cut(s)	924, 1515
AciI	CCGC	5 cut(s)	110, 186, 216, 306, 1513
AclWI	GGATC	5 cut(s)	732, 1166, 1640, 1658, 1687
AcsI	RAATTY	4 cut(s)	225, 976, 1279, 1541
AcuI	CTGAAG	2 cut(s)	735, 1551
AdeI	CACNNNGTG	1 cut(s)	303
AfaI	GTAC	5 cut(s)	282, 389, 854, 1034, 1606
AfiI	CCNNNNNNNGG	4 cut(s)	855, 1006, 1386, 1460
AflII	CTTAAG	1 cut(s)	1025
AgsI	TTSAA	9 cut(s)	118, 686, 733, 981, 1261, 1340, 1445, 1625, 1698
AjnI	CCWGG	2 cut(s)	315, 1471
AjuI	GAANNNNNNNTTGG	2 cut(s)	1416, 1448
AleI	CACNNNNGTG	1 cut(s)	1382
AluBI	AGCT	9 cut(s)	424, 719, 800, 929, 1006, 1325, 1400, 1535, 1610
AluI	AGCT	9 cut(s)	424, 719, 800, 929, 1006, 1325, 1400, 1535, 1610
Alw21I	GWGCWC	3 cut(s)	171, 534, 889
Alw26I	GTCTC	2 cut(s)	670, 799
Alw44I	GTGCAC	1 cut(s)	530
AlwI	GGATC	5 cut(s)	732, 1166, 1640, 1658, 1687
AoxI	GGCC	3 cut(s)	414, 1414, 1510
ApaLI	GTGCAC	1 cut(s)	530
ApeKI	GCWGC	4 cut(s)	800, 1097, 1610, 1640
ApoI	RAATTY	4 cut(s)	225, 976, 1279, 1541
AspLEI	GCGC	1 cut(s)	1517
AspS9I	GGNCC	4 cut(s)	355, 369, 754, 1510
AsuHPI	GGTGA	2 cut(s)	17, 1369
AvaII	GGWCC	3 cut(s)	355, 369, 754
BaeGI	GKGCMC	1 cut(s)	534
BbsI	GAAGAC	1 cut(s)	776
Bbv12I	GWGCWC	3 cut(s)	171, 534, 889
BbvI	GCAGC	4 cut(s)	787, 1109, 1597, 1652
BccI	CCATC	5 cut(s)	29, 337, 455, 1421, 1642
BceAI	ACGGC	1 cut(s)	401
BciT130I	CCWGG	2 cut(s)	317, 1473
BciVI	GTATCC	3 cut(s)	683, 986, 1127
BclI	TGATCA	1 cut(s)	652
BcoDI	GTCTC	2 cut(s)	670, 799
BfaI	CTAG	2 cut(s)	762, 1109
BfmI	CTRYAG	1 cut(s)	1611
BfrI	CTTAAG	1 cut(s)	1025
BfuAI	ACCTGC	1 cut(s)	1604
BfuI	GTATCC	3 cut(s)	683, 986, 1127
BglI	GCCNNNNNGGC	1 cut(s)	1413
BisI	GCNGC	7 cut(s)	111, 217, 801, 1098, 1513, 1611, 1641
BlsI	GCNGC	7 cut(s)	112, 218, 802, 1099, 1514, 1612, 1642
Bme1390I	CCNGG	2 cut(s)	317, 1473
Bme18I	GGWCC	3 cut(s)	355, 369, 754
BmgT120I	GGNCC	4 cut(s)	355, 369, 754, 1510
BmrFI	CCNGG	2 cut(s)	317, 1473
BmsI	GCATC	3 cut(s)	393, 613, 1718
BoxI	GACNNNNGTC	1 cut(s)	776
BpiI	GAAGAC	1 cut(s)	776
Bpu10I	CCTNAGC	1 cut(s)	1536
BpuEI	CTTGAG	4 cut(s)	185, 524, 679, 1184
BsaI	GGTCTC	1 cut(s)	670
BsaJI	CCNNGG	5 cut(s)	645, 813, 835, 1454, 1472
BsaWI	WCCGGW	1 cut(s)	1781
Bsc4I	CCNNNNNNNGG	4 cut(s)	855, 1006, 1386, 1460
Bse118I	RCCGGY	1 cut(s)	1517
Bse3DI	GCAATG	2 cut(s)	684, 1581
BseBI	CCWGG	2 cut(s)	317, 1473
BseDI	CCNNGG	5 cut(s)	645, 813, 835, 1454, 1472
BseGI	GGATG	3 cut(s)	268, 1709, 1732
BseLI	CCNNNNNNNGG	4 cut(s)	855, 1006, 1386, 1460
BseMI	GCAATG	2 cut(s)	684, 1581
BseMII	CTCAG	5 cut(s)	233, 810, 1050, 1107, 1609
BseRI	GAGGAG	2 cut(s)	959, 1600
BseSI	GKGCMC	1 cut(s)	534
BseXI	GCAGC	4 cut(s)	787, 1109, 1597, 1652
BsgI	GTGCAG	1 cut(s)	493
Bsh1236I	CGCG	2 cut(s)	924, 1515
BshFI	GGCC	3 cut(s)	416, 1416, 1512
BsiHKAI	GWGCWC	3 cut(s)	171, 534, 889
BsiSI	CCGG	2 cut(s)	1518, 1782
BslI	CCNNNNNNNGG	4 cut(s)	855, 1006, 1386, 1460
BsmAI	GTCTC	2 cut(s)	670, 799
BsmI	GAATGC	1 cut(s)	480
BsnI	GGCC	3 cut(s)	416, 1416, 1512
Bso31I	GGTCTC	1 cut(s)	670
Bsp1286I	GDGCHC	3 cut(s)	171, 534, 889
Bsp1407I	TGTACA	1 cut(s)	1604
Bsp143I	GATC	7 cut(s)	553, 652, 724, 1171, 1632, 1663, 1679
Bsp19I	CCATGG	2 cut(s)	645, 835
Bsp68I	TCGCGA	1 cut(s)	924
BspACI	CCGC	5 cut(s)	110, 186, 216, 306, 1513
BspANI	GGCC	3 cut(s)	416, 1416, 1512
BspCNI	CTCAG	5 cut(s)	234, 809, 1049, 1106, 1608
BspFNI	CGCG	2 cut(s)	924, 1515
BspMAI	CTGCAG	1 cut(s)	1615
BspMI	ACCTGC	1 cut(s)	1604
BspPI	GGATC	5 cut(s)	732, 1166, 1640, 1658, 1687
BspQI	GCTCTTC	2 cut(s)	183, 1332
BspTI	CTTAAG	1 cut(s)	1025
BspTNI	GGTCTC	1 cut(s)	670
BsrDI	GCAATG	2 cut(s)	684, 1581
BsrFI	RCCGGY	1 cut(s)	1517
BsrGI	TGTACA	1 cut(s)	1604
BssAI	RCCGGY	1 cut(s)	1517
BssECI	CCNNGG	5 cut(s)	645, 813, 835, 1454, 1472
BssMI	GATC	7 cut(s)	553, 652, 724, 1171, 1632, 1663, 1679
BssT1I	CCWWGG	4 cut(s)	645, 813, 835, 1454
Bst2UI	CCWGG	2 cut(s)	317, 1473
Bst4CI	ACNGT	1 cut(s)	1134
Bst6I	CTCTTC	5 cut(s)	9, 183, 625, 1011, 1332
BstAFI	CTTAAG	1 cut(s)	1025
BstAPI	GCANNNNNTGC	2 cut(s)	86, 194
BstAUI	TGTACA	1 cut(s)	1604
BstC8I	GCNNGC	7 cut(s)	221, 534, 827, 880, 1102, 1234, 1414
BstDEI	CTNAG	6 cut(s)	242, 796, 1036, 1093, 1536, 1595
BstDSI	CCRYGG	2 cut(s)	645, 835
BstF5I	GGATG	3 cut(s)	268, 1709, 1732
BstFNI	CGCG	2 cut(s)	924, 1515
BstHHI	GCGC	1 cut(s)	1517
BstKTI	GATC	7 cut(s)	556, 655, 727, 1174, 1635, 1666, 1682
BstMAI	GTCTC	2 cut(s)	670, 799
BstMBI	GATC	7 cut(s)	553, 652, 724, 1171, 1632, 1663, 1679
BstMWI	GCNNNNNNNGC	6 cut(s)	86, 194, 884, 1322, 1413, 1649
BstNI	CCWGG	2 cut(s)	317, 1473
BstNSI	RCATGY	2 cut(s)	192, 394
BstPAI	GACNNNNGTC	1 cut(s)	776
BstSCI	CCNGG	2 cut(s)	315, 1471
BstSFI	CTRYAG	1 cut(s)	1611
BstSLI	GKGCMC	1 cut(s)	534
BstUI	CGCG	2 cut(s)	924, 1515
BstV1I	GCAGC	4 cut(s)	787, 1109, 1597, 1652
BstV2I	GAAGAC	1 cut(s)	776
BstX2I	RGATCY	2 cut(s)	724, 1632
BstYI	RGATCY	2 cut(s)	724, 1632
BsuI	GTATCC	3 cut(s)	683, 986, 1127
BsuRI	GGCC	3 cut(s)	416, 1416, 1512
BtgI	CCRYGG	2 cut(s)	645, 835
BtsCI	GGATG	3 cut(s)	268, 1709, 1732
BtsI	GCAGTG	1 cut(s)	889
BtsIMutI	CAGTG	3 cut(s)	141, 276, 889
BtuMI	TCGCGA	1 cut(s)	924
BveI	ACCTGC	1 cut(s)	1604
Cac8I	GCNNGC	7 cut(s)	221, 534, 827, 880, 1102, 1234, 1414
CfoI	GCGC	1 cut(s)	1517
Cfr10I	RCCGGY	1 cut(s)	1517
Cfr13I	GGNCC	4 cut(s)	355, 369, 754, 1510
Csp6I	GTAC	5 cut(s)	281, 388, 853, 1033, 1605
CviQI	GTAC	5 cut(s)	281, 388, 853, 1033, 1605
DdeI	CTNAG	6 cut(s)	242, 796, 1036, 1093, 1536, 1595
DpnI	GATC	7 cut(s)	555, 654, 726, 1173, 1634, 1665, 1681
DpnII	GATC	7 cut(s)	553, 652, 724, 1171, 1632, 1663, 1679
DraI	TTTAAA	2 cut(s)	42, 1153
DraIII	CACNNNGTG	1 cut(s)	303
Eam1104I	CTCTTC	5 cut(s)	9, 183, 625, 1011, 1332
EarI	CTCTTC	5 cut(s)	9, 183, 625, 1011, 1332
Eco130I	CCWWGG	4 cut(s)	645, 813, 835, 1454
Eco147I	AGGCCT	1 cut(s)	1416
Eco31I	GGTCTC	1 cut(s)	670
Eco47I	GGWCC	3 cut(s)	355, 369, 754
Eco57I	CTGAAG	2 cut(s)	735, 1551
EcoO109I	RGGNCCY	1 cut(s)	355
EcoRI	GAATTC	2 cut(s)	976, 1279
EcoRII	CCWGG	2 cut(s)	315, 1471
EcoT14I	CCWWGG	4 cut(s)	645, 813, 835, 1454
EcoT22I	ATGCAT	1 cut(s)	1711
ErhI	CCWWGG	4 cut(s)	645, 813, 835, 1454
FalI	AAGNNNNNCTT	6 cut(s)	918, 950, 1008, 1040, 1416, 1448
FauNDI	CATATG	1 cut(s)	132
FbaI	TGATCA	1 cut(s)	652
FblI	GTMKAC	1 cut(s)	561
Fnu4HI	GCNGC	7 cut(s)	111, 217, 801, 1098, 1513, 1611, 1641
FokI	GGATG	3 cut(s)	275, 1696, 1739
Fsp4HI	GCNGC	7 cut(s)	111, 217, 801, 1098, 1513, 1611, 1641
FspBI	CTAG	2 cut(s)	762, 1109
GlaI	GCGC	1 cut(s)	1516
GluI	GCNGC	7 cut(s)	111, 217, 801, 1098, 1513, 1611, 1641
HaeIII	GGCC	3 cut(s)	416, 1416, 1512
HapII	CCGG	2 cut(s)	1518, 1782
HhaI	GCGC	1 cut(s)	1517
Hin6I	GCGC	1 cut(s)	1515
HinP1I	GCGC	1 cut(s)	1515
HincII	GTYRAC	1 cut(s)	1130
HindII	GTYRAC	1 cut(s)	1130
HinfI	GANTC	5 cut(s)	611, 641, 1247, 1445, 1464
HpaII	CCGG	2 cut(s)	1518, 1782
HphI	GGTGA	2 cut(s)	17, 1369
Hpy166II	GTNNAC	6 cut(s)	500, 532, 562, 1074, 1130, 1592
Hpy188I	TCNGA	7 cut(s)	183, 433, 513, 1039, 1332, 1531, 1714
Hpy188III	TCNNGA	7 cut(s)	155, 722, 769, 923, 1053, 1163, 1735
Hpy8I	GTNNAC	6 cut(s)	500, 532, 562, 1074, 1130, 1592
HpyAV	CCTTC	4 cut(s)	240, 448, 680, 1709
HpyCH4III	ACNGT	1 cut(s)	1134
HpyCH4IV	ACGT	2 cut(s)	1295, 1786
HpyF10VI	GCNNNNNNNGC	6 cut(s)	86, 194, 884, 1322, 1413, 1649
HpyF3I	CTNAG	6 cut(s)	242, 796, 1036, 1093, 1536, 1595
HpySE526I	ACGT	2 cut(s)	1295, 1786
HspAI	GCGC	1 cut(s)	1515
Ksp22I	TGATCA	1 cut(s)	652
Kzo9I	GATC	7 cut(s)	553, 652, 724, 1171, 1632, 1663, 1679
LguI	GCTCTTC	2 cut(s)	183, 1332
Lsp1109I	GCAGC	4 cut(s)	787, 1109, 1597, 1652
LweI	GCATC	3 cut(s)	393, 613, 1718
MaeI	CTAG	2 cut(s)	762, 1109
MaeII	ACGT	2 cut(s)	1295, 1786
MaeIII	GTNAC	3 cut(s)	58, 1180, 1436
MalI	GATC	7 cut(s)	555, 654, 726, 1173, 1634, 1665, 1681
MboI	GATC	7 cut(s)	553, 652, 724, 1171, 1632, 1663, 1679
MflI	RGATCY	2 cut(s)	724, 1632
MhlI	GDGCHC	3 cut(s)	171, 534, 889
MmeI	TCCRAC	3 cut(s)	431, 1144, 1256
Mph1103I	ATGCAT	1 cut(s)	1711
MseI	TTAA	9 cut(s)	41, 48, 276, 420, 747, 821, 1026, 1152, 1224
MslI	CAYNNNNRTG	3 cut(s)	234, 968, 1382
MspA1I	CMGCKG	3 cut(s)	800, 1006, 1610
MspCI	CTTAAG	1 cut(s)	1025
MspI	CCGG	2 cut(s)	1518, 1782
MspR9I	CCNGG	2 cut(s)	317, 1473
Mva1269I	GAATGC	1 cut(s)	480
MvaI	CCWGG	2 cut(s)	317, 1473
MvnI	CGCG	2 cut(s)	924, 1515
MwoI	GCNNNNNNNGC	6 cut(s)	86, 194, 884, 1322, 1413, 1649
NcoI	CCATGG	2 cut(s)	645, 835
NdeI	CATATG	1 cut(s)	132
NdeII	GATC	7 cut(s)	553, 652, 724, 1171, 1632, 1663, 1679
NmuCI	GTSAC	2 cut(s)	1180, 1436
NruI	TCGCGA	1 cut(s)	924
NsiI	ATGCAT	1 cut(s)	1711
NspI	RCATGY	2 cut(s)	192, 394
OliI	CACNNNNGTG	1 cut(s)	1382
PceI	AGGCCT	1 cut(s)	1416
PciSI	GCTCTTC	2 cut(s)	183, 1332
PctI	GAATGC	1 cut(s)	480
PfeI	GAWTC	5 cut(s)	611, 641, 1247, 1445, 1464
PflFI	GACNNNGTC	1 cut(s)	1434
PflMI	CCANNNNNTGG	1 cut(s)	1006
PkrI	GCNGC	7 cut(s)	112, 218, 802, 1099, 1514, 1612, 1642
PpuMI	RGGWCCY	1 cut(s)	355
PshAI	GACNNNNGTC	1 cut(s)	776
Psp5II	RGGWCCY	1 cut(s)	355
Psp6I	CCWGG	2 cut(s)	315, 1471
PspGI	CCWGG	2 cut(s)	315, 1471
PspPI	GGNCC	4 cut(s)	355, 369, 754, 1510
PspPPI	RGGWCCY	1 cut(s)	355
PstI	CTGCAG	1 cut(s)	1615
PsuI	RGATCY	2 cut(s)	724, 1632
PsyI	GACNNNGTC	1 cut(s)	1434
PvuII	CAGCTG	3 cut(s)	800, 1006, 1610
RruI	TCGCGA	1 cut(s)	924
RsaI	GTAC	5 cut(s)	282, 389, 854, 1034, 1606
RsaNI	GTAC	5 cut(s)	281, 388, 853, 1033, 1605
RseI	CAYNNNNRTG	3 cut(s)	234, 968, 1382
SapI	GCTCTTC	2 cut(s)	183, 1332
SaqAI	TTAA	9 cut(s)	41, 48, 276, 420, 747, 821, 1026, 1152, 1224
SatI	GCNGC	7 cut(s)	111, 217, 801, 1098, 1513, 1611, 1641
Sau3AI	GATC	7 cut(s)	553, 652, 724, 1171, 1632, 1663, 1679
Sau96I	GGNCC	4 cut(s)	355, 369, 754, 1510
ScrFI	CCNGG	2 cut(s)	317, 1473
SduI	GDGCHC	3 cut(s)	171, 534, 889
SfaNI	GCATC	3 cut(s)	393, 613, 1718
SfcI	CTRYAG	1 cut(s)	1611
SinI	GGWCC	3 cut(s)	355, 369, 754
SmiMI	CAYNNNNRTG	3 cut(s)	234, 968, 1382
SmlI	CTYRAG	5 cut(s)	200, 503, 694, 1025, 1163
SmoI	CTYRAG	5 cut(s)	200, 503, 694, 1025, 1163
SseBI	AGGCCT	1 cut(s)	1416
SsiI	CCGC	5 cut(s)	110, 186, 216, 306, 1513
SspI	AATATT	2 cut(s)	569, 1242
SspMI	CTAG	2 cut(s)	762, 1109
StuI	AGGCCT	1 cut(s)	1416
StyD4I	CCNGG	2 cut(s)	315, 1471
StyI	CCWWGG	4 cut(s)	645, 813, 835, 1454
TaaI	ACNGT	1 cut(s)	1134
TaiI	ACGT	2 cut(s)	1298, 1789
TaqI	TCGA	3 cut(s)	401, 942, 1467
TatI	WGTACW	3 cut(s)	280, 1032, 1604
TauI	GCSGC	3 cut(s)	113, 219, 1515
TfiI	GAWTC	5 cut(s)	611, 641, 1247, 1445, 1464
Tru1I	TTAA	9 cut(s)	41, 48, 276, 420, 747, 821, 1026, 1152, 1224
Tru9I	TTAA	9 cut(s)	41, 48, 276, 420, 747, 821, 1026, 1152, 1224
TscAI	CASTG	3 cut(s)	148, 276, 889
TseFI	GTSAC	2 cut(s)	1180, 1436
TseI	GCWGC	4 cut(s)	800, 1097, 1610, 1640
Tsp45I	GTSAC	2 cut(s)	1180, 1436
TspRI	CASTG	3 cut(s)	148, 276, 889
Tth111I	GACNNNGTC	1 cut(s)	1434
Van91I	CCANNNNNTGG	1 cut(s)	1006
Vha464I	CTTAAG	1 cut(s)	1025
VneI	GTGCAC	1 cut(s)	530
VpaK11BI	GGWCC	3 cut(s)	355, 369, 754
XapI	RAATTY	4 cut(s)	225, 976, 1279, 1541
XceI	RCATGY	2 cut(s)	192, 394
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1578
XmiI	GTMKAC	1 cut(s)	561
XspI	CTAG	2 cut(s)	762, 1109
Zsp2I	ATGCAT	1 cut(s)	1711

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.