Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0007239

Physical Location & Seq

Genomic Coordinates Reverse (-)

62537228 .. 62539619

Gene Structure 2392 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00127080.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1788 bp

ATGAGAAACTCTGCACTTCACCTAAGACATTATCACAAGGCCATCCCAACAAAGCAGCAATCCCTCAACTTCTCCTCATCACCATCCCCTGTTCTCGAATCACAAAACCCATGTCTTCGAATCCAAACCCTCCAAACCCAAAGGCTCGCGTTAGTCAATCTCTTACAATTAGGCGTTTCAGACAAACCCATTTTGTTCTTCAAGAGAATCCATGCTCAGATTCTCTCATCGGGCTTTCAACAAGATGTTTTCCTTGCCAATCTTCTACTTGACTCGTACAGGAAATCTGGTTCTATTGTTTATGCACGGAAGTTGTTTGATAGAATGCCTGAGAGGAACTCCGTTACTTGGTCTTCCATGGTTTCCATGTATACCAAGCATGGGAAGAGTGAAGAAGCACTGAAGGTGTTTTCGGAGTTCCATAGGAGTTCTGATGGGAGACCGAATGAGTATACCTTGCCTAGTGTCATTCGGGCTAGTACGCAATTTGGAGGGGTTGATCAAGGTGCCCAAGTGCATTGTTTTGTTGTTAAGACTGGTTTTGATATGGAAGTCTTTGTGGGTACTTCTTTGATTGATTTTTATGTAAAAATGGGGGATATAGAAGAGGCGAGATTGATTTTTGATGGTCTAAAAGTTAAAAGTGCAGTTACTTGGACTATAGTTATAGCAGGGTATGCAAAAAGTGGAAGAAGTGAGGCGGCTTTGAAGTTGTTTTATCATATGAGAGACACTGATGTTCTGCCTGATAAATATGTGCTCTCTGCTCTTCTGACCGCATGTTCTGCCATCAAGTTCATTGGAGGCGGCAAGCAAATTCATGCTCATGTGCTGAGAAGGGGAACAGAAATGGATGTTTCAGTGGTTAATGTACTAATAGATTTCTACACAAAGTGCAGTCAAGTCCAGGCAGGACATAAACTATTTGATAAGATGGTAGATAAGGACCTTATTTCATGGACCACAATGATAGCAGGGTACATGCAAAACTCGATGCACATGGAGGCTGTTAAGCTATTTTCTGAAATGACCAGATTGGGTTGGAAGCCAGACGGATATGGGTGTAGTAGCATTCTTACTTCATGTGGTTCACTTGAGGCTCTGAAACATGGGAGAGAAGTGCACGCTTATTCTATCAGGGTTGATCTTGTCTATGAATATTATGTGAAGAATAGTTTGATTGATATGTATGCAAAATGTGATTCCCTGTCTGATGCAAGAAGAGTTTTTGATTCCATGACTGATCATAATGTGGTCTCTTACAATGCAATGATTGAAGGATACTCAAGGCAGGATAAGGTGGCTGAAGCTCTGGATCTTTTCAATCTTATGAGGCTTAAAATGGTCCAGCCTAGTATCTTGACATTTGTCAGTCTTCTTGGTGTCTCAGCTGCTTTATTGACCTTGGAATTAAGCAAGCAAATCCATGGGCTGACCACCAAGTACGGATTATCTTTGGATATTTTTGCTGGCAGTGCTCTCATTGATGTTTATTCCAAGTGTTCATGTATTCGCGAAGCTAAACTTGTATTCGAGGAGATGAATGAAAAAGATATAGTAGTGTGGAATTCAATGTTCTGCGGATATGCCCAACAGCTGGAAAGTGAAGAGGCTCTTAAGTTGTACTCAGAGCTACAATTATCAAGACAAAATCCTAATGAGTTTACTTTTGCTTCCCTAATCTCAGCAGCCAGCAACCTAGCAAGTATGTGGGATGATGTCAAGAGGGTGAGGAAAAAAATGGAGTATAATGGTGTAGTGAAAGAAACCGGACGCAGTTGGTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

595

Amino Acids

67.13

Weight (kDa)

8.58

Isoelectric Point (pI)

42.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	112 - 158	6e-06	PPR repeat family
PPR	PF01535	115 - 142	1.5e-06	PPR repeat
PPR_2	PF13041	215 - 261	1.2e-09	PPR repeat family
PPR	PF01535	217 - 244	1.9e-06	PPR repeat
PPR_2	PF13041	316 - 362	1.5e-09	PPR repeat family
PPR	PF01535	318 - 347	6.3e-07	PPR repeat
PPR_2	PF13041	417 - 460	2.5e-11	PPR repeat family
PPR_1	PF12854	417 - 445	9.2e-06	PPR repeat
PPR_3	PF13812	417 - 462	5.3e-06	Pentatricopeptide repeat domain
PPR	PF01535	419 - 446	1.1e-06	PPR repeat
PPR_2	PF13041	517 - 563	2.3e-09	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0007239)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G39530
fragaria_vesca	FvH4_1g22400 FvH4_1g22550
malus_domestica	MD01G1019600.v1.1
prunus_persica	Prupe.6G172600_v2.0.a1
pyrus_communis	pycom01g04910
rosa_chinensis	RchiOBHm_Chr2g0116541
rosa_laevigata	RLG00000018286
rosa_multiflora	Rmu_sc0001287.1_g000020 Rmu_sc0001287.1_g000021 Rmu_sc0003255.1_g000001 Rmu_sc0003255.1_g000019 Rmu_sc0004191.1_g000031
rosa_roxburghii	Rroxscaffold_2G00127080 Rroxscaffold_2G00127100
rosa_rugosa	Rorug02G0207400 Rorug02G0207500
rosa_samantha	Rh2AG262400 Rh2BG273600 Rh2BG273900 Rh2BG274000 Rh2DG265300 Rh2DG270600 Rh2DG289100
rosa_wichuraiana	Rw2G020660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	506
AccB7I	CCANNNNNTGG	1 cut(s)	1597
AccI	GTMKAC	2 cut(s)	371, 452
AccII	CGCG	2 cut(s)	149, 1515
AciI	CCGC	4 cut(s)	701, 777, 807, 1581
AclWI	GGATC	1 cut(s)	1323
AcsI	RAATTY	2 cut(s)	816, 1567
AcuI	CTGAAG	2 cut(s)	422, 1326
AdeI	CACNNNGTG	1 cut(s)	894
AfaI	GTAC	7 cut(s)	278, 481, 565, 873, 980, 1445, 1625
AfiI	CCNNNNNNNGG	3 cut(s)	348, 381, 1597
AflII	CTTAAG	1 cut(s)	1616
AgsI	TTSAA	6 cut(s)	202, 239, 709, 1277, 1324, 1572
AjnI	CCWGG	1 cut(s)	906
AloI	GAACNNNNNNTCC	2 cut(s)	274, 306
AluBI	AGCT	6 cut(s)	1015, 1310, 1391, 1520, 1597, 1633
AluI	AGCT	6 cut(s)	1015, 1310, 1391, 1520, 1597, 1633
Alw21I	GWGCWC	3 cut(s)	762, 1125, 1480
Alw26I	GTCTC	4 cut(s)	433, 723, 1261, 1390
Alw44I	GTGCAC	1 cut(s)	1121
AlwI	GGATC	1 cut(s)	1323
AoxI	GGCC	1 cut(s)	39
ApaLI	GTGCAC	1 cut(s)	1121
ApeKI	GCWGC	3 cut(s)	55, 1391, 1688
ApoI	RAATTY	2 cut(s)	816, 1567
ArsI	GACNNNNNNTTYG	2 cut(s)	97, 129
AspS9I	GGNCC	3 cut(s)	946, 960, 1345
AsuHPI	GGTGA	3 cut(s)	11, 72, 1741
AsuII	TTCGAA	1 cut(s)	118
AvaII	GGWCC	3 cut(s)	946, 960, 1345
BaeGI	GKGCMC	2 cut(s)	511, 1125
BanI	GGYRCC	1 cut(s)	506
BbsI	GAAGAC	3 cut(s)	107, 345, 1367
Bbv12I	GWGCWC	3 cut(s)	762, 1125, 1480
BbvI	GCAGC	3 cut(s)	67, 1378, 1700
BccI	CCATC	6 cut(s)	50, 91, 428, 620, 797, 928
BciT130I	CCWGG	1 cut(s)	908
BciVI	GTATCC	1 cut(s)	1274
BclI	TGATCA	2 cut(s)	499, 1243
BcoDI	GTCTC	4 cut(s)	433, 723, 1261, 1390
BfaI	CTAG	4 cut(s)	462, 477, 1353, 1700
BfmI	CTRYAG	1 cut(s)	660
BfrI	CTTAAG	1 cut(s)	1616
BfuI	GTATCC	1 cut(s)	1274
BisI	GCNGC	5 cut(s)	56, 702, 808, 1392, 1689
BlsI	GCNGC	5 cut(s)	57, 703, 809, 1393, 1690
Bme1390I	CCNGG	1 cut(s)	908
Bme18I	GGWCC	3 cut(s)	946, 960, 1345
BmgT120I	GGNCC	3 cut(s)	946, 960, 1345
BmiI	GGNNCC	1 cut(s)	508
BmrFI	CCNGG	1 cut(s)	908
BmsI	GCATC	2 cut(s)	984, 1204
BoxI	GACNNNNGTC	1 cut(s)	1367
BpiI	GAAGAC	3 cut(s)	107, 345, 1367
BplI	GAGNNNNNCTC	2 cut(s)	323, 355
Bpu14I	TTCGAA	1 cut(s)	118
BpuEI	CTTGAG	2 cut(s)	1115, 1270
BsaI	GGTCTC	2 cut(s)	433, 1261
BsaJI	CCNNGG	3 cut(s)	357, 1404, 1426
BsaWI	WCCGGW	1 cut(s)	1769
Bsc4I	CCNNNNNNNGG	3 cut(s)	348, 381, 1597
Bse1I	ACTGG	1 cut(s)	541
Bse3DI	GCAATG	1 cut(s)	1275
BseBI	CCWGG	1 cut(s)	908
BseDI	CCNNGG	3 cut(s)	357, 1404, 1426
BseGI	GGATG	4 cut(s)	42, 83, 859, 1720
BseLI	CCNNNNNNNGG	3 cut(s)	348, 381, 1597
BseMI	GCAATG	1 cut(s)	1275
BseMII	CTCAG	6 cut(s)	230, 321, 824, 1401, 1641, 1698
BseNI	ACTGG	1 cut(s)	541
BseRI	GAGGAG	2 cut(s)	64, 1550
BseSI	GKGCMC	2 cut(s)	511, 1125
BseXI	GCAGC	3 cut(s)	67, 1378, 1700
BsgI	GTGCAG	2 cut(s)	666, 916
Bsh1236I	CGCG	2 cut(s)	149, 1515
BshFI	GGCC	1 cut(s)	41
BshNI	GGYRCC	1 cut(s)	506
BsiHKAI	GWGCWC	3 cut(s)	762, 1125, 1480
BsiSI	CCGG	1 cut(s)	1770
BslI	CCNNNNNNNGG	3 cut(s)	348, 381, 1597
BsmAI	GTCTC	4 cut(s)	433, 723, 1261, 1390
BsmI	GAATGC	2 cut(s)	330, 1071
BsnI	GGCC	1 cut(s)	41
Bso31I	GGTCTC	2 cut(s)	433, 1261
Bsp119I	TTCGAA	1 cut(s)	118
Bsp1286I	GDGCHC	4 cut(s)	511, 762, 1125, 1480
Bsp143I	GATC	4 cut(s)	499, 1144, 1243, 1315
Bsp19I	CCATGG	2 cut(s)	357, 1426
Bsp68I	TCGCGA	1 cut(s)	1515
BspACI	CCGC	4 cut(s)	701, 777, 807, 1581
BspANI	GGCC	1 cut(s)	41
BspCNI	CTCAG	6 cut(s)	229, 322, 825, 1400, 1640, 1697
BspFNI	CGCG	2 cut(s)	149, 1515
BspLI	GGNNCC	1 cut(s)	508
BspPI	GGATC	1 cut(s)	1323
BspQI	GCTCTTC	1 cut(s)	774
BspT104I	TTCGAA	1 cut(s)	118
BspT107I	GGYRCC	1 cut(s)	506
BspTI	CTTAAG	1 cut(s)	1616
BspTNI	GGTCTC	2 cut(s)	433, 1261
BsrDI	GCAATG	1 cut(s)	1275
BsrI	ACTGG	1 cut(s)	541
BssECI	CCNNGG	3 cut(s)	357, 1404, 1426
BssMI	GATC	4 cut(s)	499, 1144, 1243, 1315
BssNAI	GTATAC	2 cut(s)	372, 453
BssT1I	CCWWGG	3 cut(s)	357, 1404, 1426
Bst1107I	GTATAC	2 cut(s)	372, 453
Bst2UI	CCWGG	1 cut(s)	908
Bst6I	CTCTTC	5 cut(s)	380, 600, 774, 1216, 1602
BstAFI	CTTAAG	1 cut(s)	1616
BstAPI	GCANNNNNTGC	2 cut(s)	677, 785
BstBI	TTCGAA	1 cut(s)	118
BstC8I	GCNNGC	6 cut(s)	147, 812, 1125, 1418, 1471, 1693
BstDEI	CTNAG	7 cut(s)	23, 216, 330, 833, 1387, 1627, 1684
BstDSI	CCRYGG	2 cut(s)	357, 1426
BstF5I	GGATG	4 cut(s)	42, 83, 859, 1720
BstFNI	CGCG	2 cut(s)	149, 1515
BstKTI	GATC	4 cut(s)	502, 1147, 1246, 1318
BstMAI	GTCTC	4 cut(s)	433, 723, 1261, 1390
BstMBI	GATC	4 cut(s)	499, 1144, 1243, 1315
BstMWI	GCNNNNNNNGC	3 cut(s)	677, 785, 1475
BstNI	CCWGG	1 cut(s)	908
BstNSI	RCATGY	2 cut(s)	783, 985
BstPAI	GACNNNNGTC	1 cut(s)	1367
BstSCI	CCNGG	1 cut(s)	906
BstSFI	CTRYAG	1 cut(s)	660
BstSLI	GKGCMC	2 cut(s)	511, 1125
BstUI	CGCG	2 cut(s)	149, 1515
BstV1I	GCAGC	3 cut(s)	67, 1378, 1700
BstV2I	GAAGAC	3 cut(s)	107, 345, 1367
BstX2I	RGATCY	1 cut(s)	1315
BstYI	RGATCY	1 cut(s)	1315
BstZ17I	GTATAC	2 cut(s)	372, 453
BsuI	GTATCC	1 cut(s)	1274
BsuRI	GGCC	1 cut(s)	41
BtgI	CCRYGG	2 cut(s)	357, 1426
BtsCI	GGATG	4 cut(s)	42, 83, 859, 1720
BtsI	GCAGTG	1 cut(s)	1480
BtsIMutI	CAGTG	4 cut(s)	398, 732, 867, 1480
BtuMI	TCGCGA	1 cut(s)	1515
Cac8I	GCNNGC	6 cut(s)	147, 812, 1125, 1418, 1471, 1693
Cfr13I	GGNCC	3 cut(s)	946, 960, 1345
CseI	GACGC	1 cut(s)	1782
Csp6I	GTAC	7 cut(s)	277, 480, 564, 872, 979, 1444, 1624
CviQI	GTAC	7 cut(s)	277, 480, 564, 872, 979, 1444, 1624
DdeI	CTNAG	7 cut(s)	23, 216, 330, 833, 1387, 1627, 1684
DpnI	GATC	4 cut(s)	501, 1146, 1245, 1317
DpnII	GATC	4 cut(s)	499, 1144, 1243, 1315
DraIII	CACNNNGTG	1 cut(s)	894
Eam1104I	CTCTTC	5 cut(s)	380, 600, 774, 1216, 1602
EarI	CTCTTC	5 cut(s)	380, 600, 774, 1216, 1602
Eco130I	CCWWGG	3 cut(s)	357, 1404, 1426
Eco31I	GGTCTC	2 cut(s)	433, 1261
Eco47I	GGWCC	3 cut(s)	946, 960, 1345
Eco57I	CTGAAG	2 cut(s)	422, 1326
EcoO109I	RGGNCCY	1 cut(s)	946
EcoRI	GAATTC	1 cut(s)	1567
EcoRII	CCWGG	1 cut(s)	906
EcoT14I	CCWWGG	3 cut(s)	357, 1404, 1426
ErhI	CCWWGG	3 cut(s)	357, 1404, 1426
FalI	AAGNNNNNCTT	4 cut(s)	1509, 1541, 1599, 1631
FauNDI	CATATG	1 cut(s)	723
FbaI	TGATCA	2 cut(s)	499, 1243
FblI	GTMKAC	2 cut(s)	371, 452
Fnu4HI	GCNGC	5 cut(s)	56, 702, 808, 1392, 1689
FokI	GGATG	4 cut(s)	29, 70, 866, 1727
Fsp4HI	GCNGC	5 cut(s)	56, 702, 808, 1392, 1689
FspBI	CTAG	4 cut(s)	462, 477, 1353, 1700
GluI	GCNGC	5 cut(s)	56, 702, 808, 1392, 1689
HaeIII	GGCC	1 cut(s)	41
HapII	CCGG	1 cut(s)	1770
HgaI	GACGC	1 cut(s)	1782
HinfI	GANTC	7 cut(s)	98, 120, 207, 220, 272, 1202, 1232
HpaII	CCGG	1 cut(s)	1770
HphI	GGTGA	3 cut(s)	11, 72, 1741
Hpy166II	GTNNAC	5 cut(s)	372, 453, 1091, 1123, 1665
Hpy188I	TCNGA	9 cut(s)	181, 219, 415, 433, 774, 1024, 1104, 1213, 1630
Hpy188III	TCNNGA	7 cut(s)	95, 202, 1313, 1360, 1514, 1644, 1723
Hpy8I	GTNNAC	5 cut(s)	372, 453, 1091, 1123, 1665
HpyAV	CCTTC	3 cut(s)	397, 831, 1271
HpyF10VI	GCNNNNNNNGC	3 cut(s)	677, 785, 1475
HpyF3I	CTNAG	7 cut(s)	23, 216, 330, 833, 1387, 1627, 1684
Ksp22I	TGATCA	2 cut(s)	499, 1243
Kzo9I	GATC	4 cut(s)	499, 1144, 1243, 1315
LguI	GCTCTTC	1 cut(s)	774
Lsp1109I	GCAGC	3 cut(s)	67, 1378, 1700
LweI	GCATC	2 cut(s)	984, 1204
MaeI	CTAG	4 cut(s)	462, 477, 1353, 1700
MaeIII	GTNAC	2 cut(s)	343, 649
MalI	GATC	4 cut(s)	501, 1146, 1245, 1317
MboI	GATC	4 cut(s)	499, 1144, 1243, 1315
MflI	RGATCY	1 cut(s)	1315
MhlI	GDGCHC	4 cut(s)	511, 762, 1125, 1480
MluCI	AATT	6 cut(s)	167, 485, 816, 1409, 1567, 1637
MlyI	GAGTC	1 cut(s)	266
MmeI	TCCRAC	1 cut(s)	1022
MseI	TTAA	7 cut(s)	531, 639, 867, 1011, 1338, 1412, 1617
MslI	CAYNNNNRTG	1 cut(s)	825
MspA1I	CMGCKG	2 cut(s)	1391, 1597
MspCI	CTTAAG	1 cut(s)	1616
MspI	CCGG	1 cut(s)	1770
MspR9I	CCNGG	1 cut(s)	908
Mva1269I	GAATGC	2 cut(s)	330, 1071
MvaI	CCWGG	1 cut(s)	908
MvnI	CGCG	2 cut(s)	149, 1515
MwoI	GCNNNNNNNGC	3 cut(s)	677, 785, 1475
NcoI	CCATGG	2 cut(s)	357, 1426
NdeI	CATATG	1 cut(s)	723
NdeII	GATC	4 cut(s)	499, 1144, 1243, 1315
NlaIV	GGNNCC	1 cut(s)	508
NruI	TCGCGA	1 cut(s)	1515
NspI	RCATGY	2 cut(s)	783, 985
NspV	TTCGAA	1 cut(s)	118
PciSI	GCTCTTC	1 cut(s)	774
PctI	GAATGC	2 cut(s)	330, 1071
PfeI	GAWTC	6 cut(s)	98, 120, 207, 220, 1202, 1232
PflMI	CCANNNNNTGG	1 cut(s)	1597
PkrI	GCNGC	5 cut(s)	57, 703, 809, 1393, 1690
PleI	GAGTC	1 cut(s)	266
PpsI	GAGTC	1 cut(s)	266
PpuMI	RGGWCCY	1 cut(s)	946
PshAI	GACNNNNGTC	1 cut(s)	1367
Psp5II	RGGWCCY	1 cut(s)	946
Psp6I	CCWGG	1 cut(s)	906
PspGI	CCWGG	1 cut(s)	906
PspN4I	GGNNCC	1 cut(s)	508
PspPI	GGNCC	3 cut(s)	946, 960, 1345
PspPPI	RGGWCCY	1 cut(s)	946
PsuI	RGATCY	1 cut(s)	1315
PvuII	CAGCTG	2 cut(s)	1391, 1597
RruI	TCGCGA	1 cut(s)	1515
RsaI	GTAC	7 cut(s)	278, 481, 565, 873, 980, 1445, 1625
RsaNI	GTAC	7 cut(s)	277, 480, 564, 872, 979, 1444, 1624
RseI	CAYNNNNRTG	1 cut(s)	825
SapI	GCTCTTC	1 cut(s)	774
SaqAI	TTAA	7 cut(s)	531, 639, 867, 1011, 1338, 1412, 1617
SatI	GCNGC	5 cut(s)	56, 702, 808, 1392, 1689
Sau3AI	GATC	4 cut(s)	499, 1144, 1243, 1315
Sau96I	GGNCC	3 cut(s)	946, 960, 1345
SchI	GAGTC	1 cut(s)	266
ScrFI	CCNGG	1 cut(s)	908
SduI	GDGCHC	4 cut(s)	511, 762, 1125, 1480
SfaNI	GCATC	2 cut(s)	984, 1204
SfcI	CTRYAG	1 cut(s)	660
SfuI	TTCGAA	1 cut(s)	118
SinI	GGWCC	3 cut(s)	946, 960, 1345
SmiMI	CAYNNNNRTG	1 cut(s)	825
SmlI	CTYRAG	3 cut(s)	1094, 1285, 1616
SmoI	CTYRAG	3 cut(s)	1094, 1285, 1616
Sse9I	AATT	6 cut(s)	167, 485, 816, 1409, 1567, 1637
SsiI	CCGC	4 cut(s)	701, 777, 807, 1581
SspI	AATATT	1 cut(s)	1160
SspMI	CTAG	4 cut(s)	462, 477, 1353, 1700
StyD4I	CCNGG	1 cut(s)	906
StyI	CCWWGG	3 cut(s)	357, 1404, 1426
TaqI	TCGA	4 cut(s)	96, 118, 992, 1533
TaqII	GACCGA	1 cut(s)	457
TasI	AATT	6 cut(s)	167, 485, 816, 1409, 1567, 1637
TatI	WGTACW	2 cut(s)	871, 1623
TauI	GCSGC	2 cut(s)	704, 810
TfiI	GAWTC	6 cut(s)	98, 120, 207, 220, 1202, 1232
Tru1I	TTAA	7 cut(s)	531, 639, 867, 1011, 1338, 1412, 1617
Tru9I	TTAA	7 cut(s)	531, 639, 867, 1011, 1338, 1412, 1617
TscAI	CASTG	4 cut(s)	405, 739, 867, 1480
TseI	GCWGC	3 cut(s)	55, 1391, 1688
TspDTI	ATGAA	8 cut(s)	787, 809, 945, 1071, 1170, 1494, 1556, 1560
TspGWI	ACGGA	4 cut(s)	322, 331, 1068, 1461
TspRI	CASTG	4 cut(s)	405, 739, 867, 1480
Van91I	CCANNNNNTGG	1 cut(s)	1597
Vha464I	CTTAAG	1 cut(s)	1616
VneI	GTGCAC	1 cut(s)	1121
VpaK11BI	GGWCC	3 cut(s)	946, 960, 1345
XapI	RAATTY	2 cut(s)	816, 1567
XceI	RCATGY	2 cut(s)	783, 985
XmiI	GTMKAC	2 cut(s)	371, 452
XspI	CTAG	4 cut(s)	462, 477, 1353, 1700

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.