Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0007239

Physical Location & Seq

Genomic Coordinates Reverse (-)

14467006 .. 14469863

Gene Structure 2858 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g22550.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2385 bp

ATGAGAAATTCTTCACTTCACCTAAGACATTATCACAAGGCCATCACTTCTACCCACCAAGCCCTCTCCTTCTCCTCATTACCTTCCTTTCTTCTCGAATCCCAACACCTATCTCTCGATTCTCTTCGAATCCAAACCCTCCAAACCCAAAGGCGTGCATTAGTCAATCACTTACAACTAGGTCTTTCACACAACCCCAAGAGAATCCATGCTCAGATTCTCACATCGGGTTTCCGACAAGATGTCTTCCTTGCCAATCTTCTTCTTGACTCGTATAAGAAATCCGGGTACATTGTCTATGCACGGAATGTGTTCGATACAATGCCTGACAGGAGCTCGGTTACTTGGTCTTCCATGGTTTCGATGTACACCAAGCATGGGAAGAGTGAAGAGGCGTTGAAGGTGTTTTCGGAGTTTCATAGGAGTTCTGATGGGAGGCCGAATGAGTATACGTTTCCTAGTGTTATTCGGGCTTGTACGCAATTCGGAGGGGTTGATCAAGGTTCCCAAGTGCATTGTTTTGTTGTCAAGACTGGTTTTGATAAGGAAGTCTTTGTGGGTACTTCTTTGATTGATTTTTATGTAAAGATGGGGGATATTGAGGAGGCGAGATTGATTTTCGATGGTTTGGAAGTTAAGAGCGCGGTTACTTGGACTATTGTTATAGCAGGGTATGCGAAAAGTGGGAAAAGTGAGGCGGCTTTAAAGTTGTTTTATCAGATGAGAGACACTGATGTTCCGGATAAATATGTGCTCTCTGCTCTTCTGACTGCATGTTCTGCCCTCAAGTTCATTGGAGGCGGCAAGCAGATCCATGCTTATGTTCTGAGAAGGGGAACAGAAATGGATGTTTCGGTGGTTAATGTATTGATAGATTTCTATACAAAGTGCGGTCAAGTCCTGGCAGGACAGAAATTATTTGATAAGGTGGTGGATAGGGACCTTATTTCATGGACCACAATGATAGCAGGGTATATGCAAAACTCGATGCACGTGGAGGCTGTTAAGCTATTTTCTGAAATGACCAGATTGGGTTGGAGGCCAGACGGATATGGGTGTAGTAGCATTCTTACTTCATGTGGTTCACTTGAGGCTCTGAAACATGGGAGGGAAGTGCACGCTTATACTATCAGGGTTGATCTTGTCTACGAATATTATGTGAAGAATAGTCTGATTGATATGTATGCTAAATGTGATTCCCTGACTGATGCAAGAACAGTTTTTGACTCCATGACTGATCATAATGTGGTCTCTTACAATGCAATGATTGAAGGATACTCAAGACAGGATAAGTTGGCTGAAGCTCTGGATCTTTTCAATCTGATGAGGCTTAGATCGGTCCAGCCTAGCATCTTGACATTTGTCAGTCTTCTTGGTGTCTCAGCTGCTTCATTGACCTTGGAATTAAGCAAGCAAGTCCATGGGATGACCACCAAGTACGGGTTGTGCTTGGATATTTTTGCTGGCAGCGCTCTCATAGATGTTTATTCCAAGTGTTCATGTACTCGCGAAGCTAAACTTGTATTCGAGGAGATGAATGAAAAAGACATAGTAGTATGGAATGCAATGTTTAGTGGATATGCCCAACAGCAGGAAAGTGAAGAGGCTCTTAAGTTGTACTCTAAACTACAGTTATCGAGACAAATTCCTAATGAGTTTACTTTTGCCTCCGTAGTCTCAGCAGCCAGCAGCCTAGCAAGTGTCCAGCATGGTCAACAGTTCCACAGCCAGATCATTAAAGTTGGTCTGGAGAATGATCCTTTTGTCACAAATGCCCTTGTGGATATGTACTCCAAGTGTGGAAGCATTGAAGAGGCTCACAAACTGTTTGACTCCAAAACTTTGAAAGATGTTGCCTGTTGGAATACCATTATCTCAACCTATGCTCATCATGGAGAAGCAGAAAACGCTCTCCTGATGTTTGAAAGAATGATGAATGACGGCATAAAACCCAACTATATCACATTTGTGGGAGTGCTATCAGCTTGTAGCCATGCAGGCCTTGTGGAAGATGGACTTCGTCACTTTGAATCAATGCCTTGGTTTGGAATCGAACCAGGGATAGACCATTATTCTTGCATAGTTTCTCTCCTGGGCCGTGCCAGTAAATTATCTGAAGCCAAGGAGTTTATTGAGAAAATGCCAATGAAGCCTGCAGCAATTTTATGGAGGAGTTTACTGAGTGCATGTACCGCTGCAGGTAATGTTGAATTGGGGATCTATGGAGCAGAGATGGCAATTTTGAGTGATCCATTGGATAGTGGATCGTACATCTTGCTTTCGAATATTTATGCCGCCGAAGGTATGTGGGATGATGTCAAAAAGGTTAGGGAAAAAATGGAGTATAATGGTGTAGTGAAAGAAACTGGGCGTAGTTGGTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

795

Amino Acids

88.79

Weight (kDa)

6.35

Isoelectric Point (pI)

44.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	112 - 159	2.7e-07	PPR repeat family
PPR	PF01535	114 - 141	2.1e-06	PPR repeat
PPR_2	PF13041	214 - 259	3.9e-08	PPR repeat family
PPR	PF01535	216 - 243	7.9e-07	PPR repeat
PPR_2	PF13041	314 - 360	6.5e-09	PPR repeat family
PPR	PF01535	316 - 345	6.7e-07	PPR repeat
PPR_2	PF13041	415 - 458	8.9e-12	PPR repeat family
PPR_3	PF13812	415 - 460	5.2e-06	Pentatricopeptide repeat domain
PPR	PF01535	417 - 445	1.1e-06	PPR repeat
PPR_2	PF13041	515 - 560	7.5e-08	PPR repeat family
PPR_2	PF13041	616 - 664	2e-09	PPR repeat family
E_motif	PF20431	735 - 793	4.8e-13	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007239)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G39530
fragaria_vesca	FvH4_1g22400 FvH4_1g22550
malus_domestica	MD01G1019600.v1.1
prunus_persica	Prupe.6G172600_v2.0.a1
pyrus_communis	pycom01g04910
rosa_chinensis	RchiOBHm_Chr2g0116541
rosa_laevigata	RLG00000018286
rosa_multiflora	Rmu_sc0001287.1_g000020 Rmu_sc0001287.1_g000021 Rmu_sc0003255.1_g000001 Rmu_sc0003255.1_g000019 Rmu_sc0004191.1_g000031
rosa_roxburghii	Rroxscaffold_2G00127080 Rroxscaffold_2G00127100
rosa_rugosa	Rorug02G0207400 Rorug02G0207500
rosa_samantha	Rh2AG262400 Rh2BG273600 Rh2BG273900 Rh2BG274000 Rh2DG265300 Rh2DG270600 Rh2DG289100
rosa_wichuraiana	Rw2G020660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2189
AccI	GTMKAC	2 cut(s)	449, 1146
AccII	CGCG	2 cut(s)	644, 1509
AccIII	TCCGGA	1 cut(s)	739
AciI	CCGC	6 cut(s)	644, 698, 801, 891, 2193, 2295
AclWI	GGATC	6 cut(s)	805, 1317, 1751, 2225, 2243, 2272
AcsI	RAATTY	2 cut(s)	7, 1644
AcuI	CTGAAG	2 cut(s)	1320, 2136
AcvI	CACGTG	1 cut(s)	994
AfeI	AGCGCT	1 cut(s)	1471
AfiI	CCNNNNNNNGG	4 cut(s)	378, 1440, 1591, 2045
AflII	CTTAAG	1 cut(s)	1610
AgsI	TTSAA	8 cut(s)	400, 1271, 1318, 1811, 1846, 1925, 2030, 2210
AhdI	GACNNNNNGTC	1 cut(s)	242
AjnI	CCWGG	3 cut(s)	900, 2056, 2091
AleI	CACNNNNGTG	1 cut(s)	1967
AluBI	AGCT	6 cut(s)	336, 1009, 1304, 1385, 1514, 1985
AluI	AGCT	6 cut(s)	336, 1009, 1304, 1385, 1514, 1985
Alw21I	GWGCWC	3 cut(s)	338, 756, 1119
Alw26I	GTCTC	5 cut(s)	720, 1255, 1384, 1633, 1681
Alw44I	GTGCAC	1 cut(s)	1115
AlwI	GGATC	6 cut(s)	805, 1317, 1751, 2225, 2243, 2272
Aor13HI	TCCGGA	1 cut(s)	739
Aor51HI	AGCGCT	1 cut(s)	1471
AoxI	GGCC	5 cut(s)	39, 437, 1040, 1999, 2095
ApaLI	GTGCAC	1 cut(s)	1115
ApeKI	GCWGC	6 cut(s)	1385, 1467, 1682, 1689, 2156, 2195
ApoI	RAATTY	2 cut(s)	7, 1644
Asp700I	GAANNNNTTC	2 cut(s)	10, 311
AspLEI	GCGC	2 cut(s)	644, 1472
AspS9I	GGNCC	4 cut(s)	940, 954, 1339, 2095
AsuC2I	CCSGG	1 cut(s)	286
AsuHPI	GGTGA	1 cut(s)	11
AsuII	TTCGAA	2 cut(s)	127, 2282
AvaII	GGWCC	3 cut(s)	940, 954, 1339
BaeGI	GKGCMC	1 cut(s)	1119
BanII	GRGCYC	1 cut(s)	338
BbrPI	CACGTG	1 cut(s)	994
BbsI	GAAGAC	3 cut(s)	238, 342, 1361
Bbv12I	GWGCWC	3 cut(s)	338, 756, 1119
BbvI	GCAGC	6 cut(s)	1372, 1479, 1694, 1701, 2168, 2182
BccI	CCATC	6 cut(s)	50, 425, 583, 617, 2006, 2227
BceAI	ACGGC	2 cut(s)	1957, 2082
BciT130I	CCWGG	3 cut(s)	902, 2058, 2093
BciVI	GTATCC	1 cut(s)	1268
BclI	TGATCA	2 cut(s)	496, 1237
BcnI	CCSGG	1 cut(s)	286
BcoDI	GTCTC	5 cut(s)	720, 1255, 1384, 1633, 1681
BfaI	CTAG	4 cut(s)	179, 459, 1347, 1694
BfmI	CTRYAG	3 cut(s)	1628, 2154, 2196
BfoI	RGCGCY	1 cut(s)	1473
BfrI	CTTAAG	1 cut(s)	1610
BfuAI	ACCTGC	1 cut(s)	2189
BfuI	GTATCC	1 cut(s)	1268
BglI	GCCNNNNNGGC	1 cut(s)	1998
BisI	GCNGC	9 cut(s)	699, 802, 1386, 1468, 1683, 1690, 2157, 2196, 2295
BlsI	GCNGC	9 cut(s)	700, 803, 1387, 1469, 1684, 1691, 2158, 2197, 2296
Bme1390I	CCNGG	4 cut(s)	286, 902, 2058, 2093
Bme18I	GGWCC	3 cut(s)	940, 954, 1339
BmeRI	GACNNNNNGTC	1 cut(s)	242
BmgT120I	GGNCC	4 cut(s)	940, 954, 1339, 2095
BmiI	GGNNCC	2 cut(s)	505, 941
BmrFI	CCNGG	4 cut(s)	286, 902, 2058, 2093
BmrI	ACTGGG	1 cut(s)	2376
BmsI	GCATC	3 cut(s)	978, 1198, 1359
BmuI	ACTGGG	1 cut(s)	2376
BoxI	GACNNNNGTC	1 cut(s)	1361
BpiI	GAAGAC	3 cut(s)	238, 342, 1361
BpmI	CTGGAG	1 cut(s)	1769
Bpu14I	TTCGAA	2 cut(s)	127, 2282
BpuEI	CTTGAG	3 cut(s)	770, 1109, 1264
BpuMI	CCSGG	1 cut(s)	286
BsaAI	YACGTR	1 cut(s)	994
BsaI	GGTCTC	1 cut(s)	1255
BsaJI	CCNNGG	7 cut(s)	354, 1398, 1420, 2039, 2057, 2092, 2121
BsaWI	WCCGGW	1 cut(s)	739
Bsc4I	CCNNNNNNNGG	4 cut(s)	378, 1440, 1591, 2045
Bse1I	ACTGG	3 cut(s)	538, 2103, 2371
Bse3DI	GCAATG	2 cut(s)	1269, 1572
BseAI	TCCGGA	1 cut(s)	739
BseBI	CCWGG	3 cut(s)	902, 2058, 2093
BseDI	CCNNGG	7 cut(s)	354, 1398, 1420, 2039, 2057, 2092, 2121
BseGI	GGATG	3 cut(s)	853, 1431, 2317
BseLI	CCNNNNNNNGG	4 cut(s)	378, 1440, 1591, 2045
BseMI	GCAATG	2 cut(s)	1269, 1572
BseMII	CTCAG	5 cut(s)	227, 818, 1395, 1692, 2171
BseNI	ACTGG	3 cut(s)	538, 2103, 2371
BseRI	GAGGAG	4 cut(s)	64, 617, 1544, 2185
BseSI	GKGCMC	1 cut(s)	1119
BseXI	GCAGC	6 cut(s)	1372, 1479, 1694, 1701, 2168, 2182
Bsh1236I	CGCG	2 cut(s)	644, 1509
BshFI	GGCC	5 cut(s)	41, 439, 1042, 2001, 2097
BsiHKAI	GWGCWC	3 cut(s)	338, 756, 1119
BsiSI	CCGG	2 cut(s)	285, 740
BslFI	GGGAC	1 cut(s)	953
BslI	CCNNNNNNNGG	4 cut(s)	378, 1440, 1591, 2045
BsmAI	GTCTC	5 cut(s)	720, 1255, 1384, 1633, 1681
BsmFI	GGGAC	1 cut(s)	953
BsmI	GAATGC	2 cut(s)	1065, 1567
BsnI	GGCC	5 cut(s)	41, 439, 1042, 2001, 2097
Bso31I	GGTCTC	1 cut(s)	1255
Bsp119I	TTCGAA	2 cut(s)	127, 2282
Bsp1286I	GDGCHC	3 cut(s)	338, 756, 1119
Bsp13I	TCCGGA	1 cut(s)	739
Bsp1407I	TGTACA	1 cut(s)	366
Bsp19I	CCATGG	2 cut(s)	354, 1420
Bsp68I	TCGCGA	1 cut(s)	1509
BspACI	CCGC	6 cut(s)	644, 698, 801, 891, 2193, 2295
BspANI	GGCC	5 cut(s)	41, 439, 1042, 2001, 2097
BspCNI	CTCAG	5 cut(s)	226, 819, 1394, 1691, 2172
BspEI	TCCGGA	1 cut(s)	739
BspFNI	CGCG	2 cut(s)	644, 1509
BspLI	GGNNCC	2 cut(s)	505, 941
BspMAI	CTGCAG	2 cut(s)	2158, 2200
BspMI	ACCTGC	1 cut(s)	2189
BspPI	GGATC	6 cut(s)	805, 1317, 1751, 2225, 2243, 2272
BspQI	GCTCTTC	1 cut(s)	768
BspT104I	TTCGAA	2 cut(s)	127, 2282
BspTI	CTTAAG	1 cut(s)	1610
BspTNI	GGTCTC	1 cut(s)	1255
BsrDI	GCAATG	2 cut(s)	1269, 1572
BsrGI	TGTACA	1 cut(s)	366
BsrI	ACTGG	3 cut(s)	538, 2103, 2371
BssECI	CCNNGG	7 cut(s)	354, 1398, 1420, 2039, 2057, 2092, 2121
BssNAI	GTATAC	1 cut(s)	450
BssT1I	CCWWGG	5 cut(s)	354, 1398, 1420, 2039, 2121
Bst1107I	GTATAC	1 cut(s)	450
Bst2UI	CCWGG	3 cut(s)	902, 2058, 2093
Bst4CI	ACNGT	4 cut(s)	1219, 1632, 1719, 1827
Bst6I	CTCTTC	6 cut(s)	129, 377, 384, 768, 1596, 1806
BstAFI	CTTAAG	1 cut(s)	1610
BstAPI	GCANNNNNTGC	2 cut(s)	674, 779
BstAUI	TGTACA	1 cut(s)	366
BstBAI	YACGTR	1 cut(s)	994
BstBI	TTCGAA	2 cut(s)	127, 2282
BstC8I	GCNNGC	8 cut(s)	156, 806, 1119, 1412, 1465, 1687, 1999, 2154
BstDEI	CTNAG	7 cut(s)	23, 213, 827, 1331, 1381, 1678, 2180
BstDSI	CCRYGG	2 cut(s)	354, 1420
BstF5I	GGATG	3 cut(s)	853, 1431, 2317
BstFNI	CGCG	2 cut(s)	644, 1509
BstH2I	RGCGCY	1 cut(s)	1473
BstHHI	GCGC	2 cut(s)	644, 1472
BstMAI	GTCTC	5 cut(s)	720, 1255, 1384, 1633, 1681
BstMWI	GCNNNNNNNGC	8 cut(s)	674, 779, 1469, 1907, 1998, 2149, 2192, 2234
BstNI	CCWGG	3 cut(s)	902, 2058, 2093
BstNSI	RCATGY	2 cut(s)	777, 2190
BstPAI	GACNNNNGTC	1 cut(s)	1361
BstSCI	CCNGG	4 cut(s)	284, 900, 2056, 2091
BstSFI	CTRYAG	3 cut(s)	1628, 2154, 2196
BstSLI	GKGCMC	1 cut(s)	1119
BstUI	CGCG	2 cut(s)	644, 1509
BstV1I	GCAGC	6 cut(s)	1372, 1479, 1694, 1701, 2168, 2182
BstV2I	GAAGAC	3 cut(s)	238, 342, 1361
BstX2I	RGATCY	3 cut(s)	810, 1309, 2217
BstYI	RGATCY	3 cut(s)	810, 1309, 2217
BstZ17I	GTATAC	1 cut(s)	450
BsuI	GTATCC	1 cut(s)	1268
BsuRI	GGCC	5 cut(s)	41, 439, 1042, 2001, 2097
BtgI	CCRYGG	2 cut(s)	354, 1420
BtsCI	GGATG	3 cut(s)	853, 1431, 2317
BtsIMutI	CAGTG	1 cut(s)	729
BtuMI	TCGCGA	1 cut(s)	1509
BveI	ACCTGC	1 cut(s)	2189
Cac8I	GCNNGC	8 cut(s)	156, 806, 1119, 1412, 1465, 1687, 1999, 2154
CfoI	GCGC	2 cut(s)	644, 1472
Cfr13I	GGNCC	4 cut(s)	940, 954, 1339, 2095
DdeI	CTNAG	7 cut(s)	23, 213, 827, 1331, 1381, 1678, 2180
DraI	TTTAAA	1 cut(s)	705
DriI	GACNNNNNGTC	1 cut(s)	242
Eam1104I	CTCTTC	6 cut(s)	129, 377, 384, 768, 1596, 1806
Eam1105I	GACNNNNNGTC	1 cut(s)	242
EarI	CTCTTC	6 cut(s)	129, 377, 384, 768, 1596, 1806
Ecl136II	GAGCTC	1 cut(s)	336
Eco130I	CCWWGG	5 cut(s)	354, 1398, 1420, 2039, 2121
Eco147I	AGGCCT	1 cut(s)	2001
Eco24I	GRGCYC	1 cut(s)	338
Eco31I	GGTCTC	1 cut(s)	1255
Eco47I	GGWCC	3 cut(s)	940, 954, 1339
Eco47III	AGCGCT	1 cut(s)	1471
Eco53kI	GAGCTC	1 cut(s)	336
Eco57I	CTGAAG	2 cut(s)	1320, 2136
Eco72I	CACGTG	1 cut(s)	994
EcoICRI	GAGCTC	1 cut(s)	336
EcoO109I	RGGNCCY	1 cut(s)	940
EcoRII	CCWGG	3 cut(s)	900, 2056, 2091
EcoT14I	CCWWGG	5 cut(s)	354, 1398, 1420, 2039, 2121
EcoT38I	GRGCYC	1 cut(s)	338
ErhI	CCWWGG	5 cut(s)	354, 1398, 1420, 2039, 2121
FalI	AAGNNNNNCTT	8 cut(s)	536, 568, 1503, 1535, 1593, 1625, 2001, 2033
FaqI	GGGAC	1 cut(s)	953
FbaI	TGATCA	2 cut(s)	496, 1237
FblI	GTMKAC	2 cut(s)	449, 1146
Fnu4HI	GCNGC	9 cut(s)	699, 802, 1386, 1468, 1683, 1690, 2157, 2196, 2295
FokI	GGATG	3 cut(s)	860, 1438, 2324
FriOI	GRGCYC	1 cut(s)	338
Fsp4HI	GCNGC	9 cut(s)	699, 802, 1386, 1468, 1683, 1690, 2157, 2196, 2295
FspBI	CTAG	4 cut(s)	179, 459, 1347, 1694
GlaI	GCGC	2 cut(s)	643, 1471
GluI	GCNGC	9 cut(s)	699, 802, 1386, 1468, 1683, 1690, 2157, 2196, 2295
GsuI	CTGGAG	1 cut(s)	1769
HaeII	RGCGCY	1 cut(s)	1473
HaeIII	GGCC	5 cut(s)	41, 439, 1042, 2001, 2097
HapII	CCGG	2 cut(s)	285, 740
HhaI	GCGC	2 cut(s)	644, 1472
Hin6I	GCGC	2 cut(s)	642, 1470
HinP1I	GCGC	2 cut(s)	642, 1470
HincII	GTYRAC	1 cut(s)	1715
HindII	GTYRAC	1 cut(s)	1715
HpaII	CCGG	2 cut(s)	285, 740
HphI	GGTGA	1 cut(s)	11
Hpy166II	GTNNAC	8 cut(s)	369, 450, 1085, 1117, 1147, 1659, 1715, 2177
Hpy8I	GTNNAC	8 cut(s)	369, 450, 1085, 1117, 1147, 1659, 1715, 2177
HpyAV	CCTTC	6 cut(s)	79, 93, 394, 825, 1265, 2294
HpyCH4III	ACNGT	4 cut(s)	1219, 1632, 1719, 1827
HpyCH4IV	ACGT	2 cut(s)	452, 993
HpyF10VI	GCNNNNNNNGC	8 cut(s)	674, 779, 1469, 1907, 1998, 2149, 2192, 2234
HpyF3I	CTNAG	7 cut(s)	23, 213, 827, 1331, 1381, 1678, 2180
HpySE526I	ACGT	2 cut(s)	452, 993
HspAI	GCGC	2 cut(s)	642, 1470
Kpn2I	TCCGGA	1 cut(s)	739
Ksp22I	TGATCA	2 cut(s)	496, 1237
LguI	GCTCTTC	1 cut(s)	768
LmnI	GCTCC	2 cut(s)	333, 2225
Lsp1109I	GCAGC	6 cut(s)	1372, 1479, 1694, 1701, 2168, 2182
LweI	GCATC	3 cut(s)	978, 1198, 1359
MaeI	CTAG	4 cut(s)	179, 459, 1347, 1694
MaeII	ACGT	2 cut(s)	452, 993
MaeIII	GTNAC	4 cut(s)	340, 646, 1765, 2021
MflI	RGATCY	3 cut(s)	810, 1309, 2217
MhlI	GDGCHC	3 cut(s)	338, 756, 1119
MluCI	AATT	9 cut(s)	7, 482, 914, 1403, 1644, 2108, 2160, 2210, 2238
MlyI	GAGTC	3 cut(s)	263, 1220, 1826
MmeI	TCCRAC	3 cut(s)	259, 1016, 1841
MroI	TCCGGA	1 cut(s)	739
MroXI	GAANNNNTTC	2 cut(s)	10, 311
MseI	TTAA	7 cut(s)	636, 704, 861, 1005, 1406, 1611, 1737
MslI	CAYNNNNRTG	2 cut(s)	819, 1967
MspA1I	CMGCKG	2 cut(s)	1385, 2195
MspCI	CTTAAG	1 cut(s)	1610
MspI	CCGG	2 cut(s)	285, 740
MspR9I	CCNGG	4 cut(s)	286, 902, 2058, 2093
Mva1269I	GAATGC	2 cut(s)	1065, 1567
MvaI	CCWGG	3 cut(s)	902, 2058, 2093
MvnI	CGCG	2 cut(s)	644, 1509
MwoI	GCNNNNNNNGC	8 cut(s)	674, 779, 1469, 1907, 1998, 2149, 2192, 2234
NciI	CCSGG	1 cut(s)	286
NcoI	CCATGG	2 cut(s)	354, 1420
NlaIV	GGNNCC	2 cut(s)	505, 941
NmuCI	GTSAC	2 cut(s)	1765, 2021
NruI	TCGCGA	1 cut(s)	1509
NspI	RCATGY	2 cut(s)	777, 2190
NspV	TTCGAA	2 cut(s)	127, 2282
OliI	CACNNNNGTG	1 cut(s)	1967
PceI	AGGCCT	1 cut(s)	2001
PciSI	GCTCTTC	1 cut(s)	768
PctI	GAATGC	2 cut(s)	1065, 1567
PdmI	GAANNNNTTC	2 cut(s)	10, 311
PfeI	GAWTC	8 cut(s)	98, 119, 129, 204, 217, 1196, 2030, 2049
PflFI	GACNNNGTC	1 cut(s)	2019
PkrI	GCNGC	9 cut(s)	700, 803, 1387, 1469, 1684, 1691, 2158, 2197, 2296
PleI	GAGTC	3 cut(s)	263, 1220, 1826
PmaCI	CACGTG	1 cut(s)	994
PmlI	CACGTG	1 cut(s)	994
PpsI	GAGTC	3 cut(s)	263, 1220, 1826
Ppu21I	YACGTR	1 cut(s)	994
PpuMI	RGGWCCY	1 cut(s)	940
PshAI	GACNNNNGTC	1 cut(s)	1361
Psp124BI	GAGCTC	1 cut(s)	338
Psp5II	RGGWCCY	1 cut(s)	940
Psp6I	CCWGG	3 cut(s)	900, 2056, 2091
PspCI	CACGTG	1 cut(s)	994
PspGI	CCWGG	3 cut(s)	900, 2056, 2091
PspN4I	GGNNCC	2 cut(s)	505, 941
PspPI	GGNCC	4 cut(s)	940, 954, 1339, 2095
PspPPI	RGGWCCY	1 cut(s)	940
PstI	CTGCAG	2 cut(s)	2158, 2200
PsuI	RGATCY	3 cut(s)	810, 1309, 2217
PsyI	GACNNNGTC	1 cut(s)	2019
PvuII	CAGCTG	1 cut(s)	1385
RruI	TCGCGA	1 cut(s)	1509
RseI	CAYNNNNRTG	2 cut(s)	819, 1967
SacI	GAGCTC	1 cut(s)	338
SapI	GCTCTTC	1 cut(s)	768
SaqAI	TTAA	7 cut(s)	636, 704, 861, 1005, 1406, 1611, 1737
SatI	GCNGC	9 cut(s)	699, 802, 1386, 1468, 1683, 1690, 2157, 2196, 2295
Sau96I	GGNCC	4 cut(s)	940, 954, 1339, 2095
SchI	GAGTC	3 cut(s)	263, 1220, 1826
ScrFI	CCNGG	4 cut(s)	286, 902, 2058, 2093
SduI	GDGCHC	3 cut(s)	338, 756, 1119
SfaNI	GCATC	3 cut(s)	978, 1198, 1359
SfcI	CTRYAG	3 cut(s)	1628, 2154, 2196
SfuI	TTCGAA	2 cut(s)	127, 2282
SinI	GGWCC	3 cut(s)	940, 954, 1339
SmiMI	CAYNNNNRTG	2 cut(s)	819, 1967
SmlI	CTYRAG	4 cut(s)	785, 1088, 1279, 1610
SmoI	CTYRAG	4 cut(s)	785, 1088, 1279, 1610
Sse9I	AATT	9 cut(s)	7, 482, 914, 1403, 1644, 2108, 2160, 2210, 2238
SseBI	AGGCCT	1 cut(s)	2001
SsiI	CCGC	6 cut(s)	644, 698, 801, 891, 2193, 2295
SspI	AATATT	2 cut(s)	1154, 2287
SspMI	CTAG	4 cut(s)	179, 459, 1347, 1694
SstI	GAGCTC	1 cut(s)	338
StuI	AGGCCT	1 cut(s)	2001
StyD4I	CCNGG	4 cut(s)	284, 900, 2056, 2091
StyI	CCWWGG	5 cut(s)	354, 1398, 1420, 2039, 2121
TaaI	ACNGT	4 cut(s)	1219, 1632, 1719, 1827
TaiI	ACGT	2 cut(s)	455, 996
TaqII	GACCGA	1 cut(s)	1327
TasI	AATT	9 cut(s)	7, 482, 914, 1403, 1644, 2108, 2160, 2210, 2238
TatI	WGTACW	4 cut(s)	366, 1502, 1617, 1788
TauI	GCSGC	3 cut(s)	701, 804, 2297
TfiI	GAWTC	8 cut(s)	98, 119, 129, 204, 217, 1196, 2030, 2049
Tru1I	TTAA	7 cut(s)	636, 704, 861, 1005, 1406, 1611, 1737
Tru9I	TTAA	7 cut(s)	636, 704, 861, 1005, 1406, 1611, 1737
TscAI	CASTG	1 cut(s)	736
TseFI	GTSAC	2 cut(s)	1765, 2021
TseI	GCWGC	6 cut(s)	1385, 1467, 1682, 1689, 2156, 2195
Tsp45I	GTSAC	2 cut(s)	1765, 2021
TspGWI	ACGGA	3 cut(s)	319, 1062, 1660
TspRI	CASTG	1 cut(s)	736
Tth111I	GACNNNGTC	1 cut(s)	2019
Vha464I	CTTAAG	1 cut(s)	1610
VneI	GTGCAC	1 cut(s)	1115
VpaK11BI	GGWCC	3 cut(s)	940, 954, 1339
XapI	RAATTY	2 cut(s)	7, 1644
XceI	RCATGY	2 cut(s)	777, 2190
XmiI	GTMKAC	2 cut(s)	449, 1146
XmnI	GAANNNNTTC	2 cut(s)	10, 311
XspI	CTAG	4 cut(s)	179, 459, 1347, 1694

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.