Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0007239

Physical Location & Seq

Genomic Coordinates Forward (+)

8138846 .. 8142411

Gene Structure 3566 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1019600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2550 bp

ATGAGAAACTTTGCACTTCACCACTACCTAAGTAGGCGACGAAATTCTCACAAAACCCTCAACGCATCCACTTTAGCAGCATTACCAGTACCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTACCTTTCCAATTCGAACCAAAAGGCGCGCTTTACTCGACCTCTTACAACCACGCGACCACTCCGACAAACCCATTTTCTACTACAACGCAATTCATGCCCAGATTCTCCTCTCCGGCTTTCGAGACGATGTTTTTCTTGCTAATCTTCTCTTGCACTCCTATGCCAAATCTGGCTCTGTTATTTACGCGCGGAAACTGTTTGATAAAATGCCTGAAAGGAACTCGGTTACTTGGTCTTCCATGGTTTCTATGTATACCAAGCATGGTAATTATGAACAAGCATTGCTTATGTTTTCGGACTTCTGCAGGAATTCCGATGGGCACCCGAATGAGTATACGTTGGCCAGTGTTATCCGCGCTTGTACGCAGTTGGGAGGGATTGATCAAGGTGCCCAAGTGCATGGTTTTGTTGTCAAGACTGGTTTTTATCAGGATGTTTATGTGGCTACTTCTTTAGTCGATTTTTACGTCAAAAATGGCCATATAGATGAAGCTGACCTGATTTTTGAGGGTTTGAACGTGAAAAGTGCAGTTACTTGGACCATAATGATAGCAGGGTATGCAAAATGTGGAGAAAGTGAAGTGTCCTTGAAATTGTTTTACCAAATGAGAGACACCGATGTTCTTCCTGACAAATATGTTCTGTCTAGTGTCCTGACTGCATGTTCTGCGCTCAAATTCATTGGAGGCGGCAAGCAAATCCATGCTTATGTGCTTAGAAGGGGAACCGTAATGGACGTTTCAGTGGTTAATGTGCTTGTAGATTTTTATACCAAGTGCGGTGAAGTGGAGGCAGCAAAGAAGTTATTCGATATGATTGTAGTCAAGGACCTCATTTCGTGGACCACGATGATAGCCGGGTACATGCAGAATTCATTTGAGCGGGAGGCTGTTAAGTTATTTTCTGAAATGGCCGGATTGGGTTGGAAGCCGGATGGATTTGCATGCAGTAGCATTCTTACTTCGTGTGGTTCACTTGACGCTCTTAATCAGGGGAGAGAAGTCCATGCGTATGCTATTAGAGTCCATCTTGTTTATGAAGCTTATGTGAAGAATAGTTTGATTGATATGTATGCAAAATGTGATTCCCTTACTGATGCAAGAAGAGTATTTGATTCAATGACTGATCATAATGTTGTGTCTTACAATACGATGATCGAAGGATACTCAAGACAGGATAAGCTGTCTGAAGCGCTGCATCTTTTCAATGAGCTTAGACTTAGATCGTTCCAGCCGAGTCTCTTGACGTTCGTCAGCCTTCTTGGTATCTCAGCTGCTTTATTCACGTTGCAGTTGAGCAAGCAAATCCATGGTTTGATCACCAAATATGGGTACTGTTTGGATGTATTTTCTGGCAGTGGTCTGATAGATGTTTATTCAAAGTGCTCAGGTATTAGAGATGCTAGACTTGTATTCGATGAGATGTATGAGAAAGACATTGTAGTGTGGAATGCGATGTTTTGCGGATACACGCAACAGATGGAAAGTGAAGAGGCTCTTAGACTGTACACAGAATTACAATTATCGAGACAAAATCCTAATGAATTTACTTTTGCAGCCCTAATCTCAGCAGCCAGTAACCTGGCAAGTATGCAGCATGGCCAACAGTTCCATAACCAGCTCATTAAGATGGGTCTTGACAGTGATCTGTTCGTCACAAATGCCCTTGTGGATATGTATTCCAAGTGTGGAAGCATTGAAGAGGCTTGCAAAATATTTAATTCAAAAGTTTGGAGTGACGTTGCCTGTTGGAATTCCATAATATCAACATATGCTCAACATGGAGAAGCAGAAGAAGCCCTTCTGATGTTTGCAAGAATGATGAAGGAGGGAATAAAACCCAACTATATCACATTTGTGGGTGTGTTATCAGCTTGTAGCCATGCTGGCCTTGTGGAAGATGGACTTCGCCACTTTGAATCAATGCCTCAGTTTGGGATTGATCCAGGAACTGAACATTATGCTTGCATAGTGACTCTCCTCGGTCGTGCTGGCAAATTATTTGAAGCTAAGGAATTCATTGAGAAAATGCCGGTAAAACCAGCAGCAATTGTATGGAGGAGCTTGCTCAGCGCGTGCACTGCTGCCGGTAATGTTGAATTGGGAACATATGCAGCAGAGATGGCAATTTGGAATGATCCAGTGGATAGTGGATCATATATCTTACTTTCAAATATTTATGCATCCAGAGGTATGTGGGCTGATGTCAAGGCGGTGAGGGAAAAAATGGACAATGATGGGGTGGTGAAAGAAACCGGCTGTAGTTGGGTTGAAGTGAATAATGAAGTTCATACATTTGCTGCAAGAGATAGAACACATCGTGAGGCAGATCTAATTTTTTCAATTCTAGACAATTTGATTCTGCAGATTAAGGGTGTTGGTTATGTGCCTGATATTACGACACTTGTGATGAATGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

850

Amino Acids

94.91

Weight (kDa)

6.02

Isoelectric Point (pI)

43.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	219 - 265	1.4e-07	PPR repeat family
PPR	PF01535	221 - 248	8.8e-06	PPR repeat
PPR_2	PF13041	320 - 366	1.2e-06	PPR repeat family
PPR_2	PF13041	421 - 464	7.7e-11	PPR repeat family
PPR	PF01535	423 - 451	2.3e-06	PPR repeat
PPR_2	PF13041	521 - 567	3.6e-08	PPR repeat family
PPR_3	PF13812	622 - 669	9.5e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	623 - 670	5.1e-10	PPR repeat family
PPR	PF01535	626 - 655	3.7e-06	PPR repeat
E_motif	PF20431	741 - 801	1.5e-17	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007239)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G39530
fragaria_vesca	FvH4_1g22400 FvH4_1g22550
malus_domestica	MD01G1019600.v1.1
prunus_persica	Prupe.6G172600_v2.0.a1
pyrus_communis	pycom01g04910
rosa_chinensis	RchiOBHm_Chr2g0116541
rosa_laevigata	RLG00000018286
rosa_multiflora	Rmu_sc0001287.1_g000020 Rmu_sc0001287.1_g000021 Rmu_sc0003255.1_g000001 Rmu_sc0003255.1_g000019 Rmu_sc0004191.1_g000031
rosa_roxburghii	Rroxscaffold_2G00127080 Rroxscaffold_2G00127100
rosa_rugosa	Rorug02G0207400 Rorug02G0207500
rosa_samantha	Rh2AG262400 Rh2BG273600 Rh2BG273900 Rh2BG274000 Rh2DG265300 Rh2DG270600 Rh2DG289100
rosa_wichuraiana	Rw2G020660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	450, 518
AccBSI	CCGCTC	1 cut(s)	1012
AccI	GTMKAC	2 cut(s)	383, 464
AccII	CGCG	6 cut(s)	156, 183, 317, 319, 486, 2204
AciI	CCGC	7 cut(s)	319, 484, 819, 909, 1012, 1593, 2342
AclWI	GGATC	3 cut(s)	2066, 2261, 2290
AcoI	YGGCCR	4 cut(s)	471, 607, 1041, 1729
AcsI	RAATTY	7 cut(s)	43, 439, 806, 1000, 1673, 1882, 2144
AcuI	CTGAAG	1 cut(s)	1338
AdeI	CACNNNGTG	1 cut(s)	2450
AfaI	GTAC	5 cut(s)	90, 493, 992, 1463, 1637
AfeI	AGCGCT	1 cut(s)	1323
AfiI	CCNNNNNNNGG	2 cut(s)	1458, 2063
AjnI	CCWGG	2 cut(s)	1710, 2074
AleI	CACNNNNGTG	1 cut(s)	1985
AluBI	AGCT	9 cut(s)	623, 1172, 1312, 1342, 1403, 1750, 2003, 2138, 2193
AluI	AGCT	9 cut(s)	623, 1172, 1312, 1342, 1403, 1750, 2003, 2138, 2193
Alw21I	GWGCWC	2 cut(s)	1517, 2210
Alw26I	GTCTC	4 cut(s)	246, 735, 1373, 1651
Alw44I	GTGCAC	1 cut(s)	2206
AlwI	GGATC	3 cut(s)	2066, 2261, 2290
AlwNI	CAGNNNCTG	1 cut(s)	2081
Aor51HI	AGCGCT	1 cut(s)	1323
AoxI	GGCC	5 cut(s)	471, 607, 1041, 1729, 2017
ApaLI	GTGCAC	1 cut(s)	2206
ApoI	RAATTY	7 cut(s)	43, 439, 806, 1000, 1673, 1882, 2144
ArsI	GACNNNNNNTTYG	2 cut(s)	617, 649
Asp700I	GAANNNNTTC	2 cut(s)	935, 1929
AspLEI	GCGC	7 cut(s)	156, 158, 319, 488, 802, 1324, 2204
AspS9I	GGNCC	3 cut(s)	669, 958, 972
AsuC2I	CCSGG	1 cut(s)	988
AsuHPI	GGTGA	5 cut(s)	11, 923, 1441, 2356, 2386
AsuII	TTCGAA	1 cut(s)	142
AvaII	GGWCC	3 cut(s)	669, 958, 972
BaeGI	GKGCMC	3 cut(s)	453, 523, 2210
BalI	TGGCCA	3 cut(s)	473, 609, 1731
BanI	GGYRCC	2 cut(s)	450, 518
BbsI	GAAGAC	1 cut(s)	357
Bbv12I	GWGCWC	2 cut(s)	1517, 2210
BccI	CCATC	8 cut(s)	440, 1058, 1164, 1603, 1753, 2024, 2245, 2360
BciT130I	CCWGG	2 cut(s)	1712, 2076
BciVI	GTATCC	2 cut(s)	1286, 1589
BclI	TGATCA	3 cut(s)	511, 1255, 1446
BcnI	CCSGG	1 cut(s)	988
BcoDI	GTCTC	4 cut(s)	246, 735, 1373, 1651
BfaI	CTAG	3 cut(s)	777, 1533, 2477
BfmI	CTRYAG	3 cut(s)	433, 2389, 2492
BfoI	RGCGCY	1 cut(s)	1325
BfuI	GTATCC	2 cut(s)	1286, 1589
BglI	GCCNNNNNGGC	1 cut(s)	2016
BglII	AGATCT	1 cut(s)	2458
BlpI	GCTNAGC	1 cut(s)	2198
Bme1390I	CCNGG	3 cut(s)	988, 1712, 2076
Bme18I	GGWCC	3 cut(s)	669, 958, 972
BmgT120I	GGNCC	3 cut(s)	669, 958, 972
BmiI	GGNNCC	3 cut(s)	452, 520, 856
BmrFI	CCNGG	3 cut(s)	988, 1712, 2076
BmsI	GCATC	5 cut(s)	74, 1216, 1336, 1519, 2321
BoxI	GACNNNNGTC	1 cut(s)	1379
BpiI	GAAGAC	1 cut(s)	357
Bpu10I	CCTNAGC	2 cut(s)	1516, 2139
Bpu1102I	GCTNAGC	1 cut(s)	2198
Bpu14I	TTCGAA	1 cut(s)	142
BpuEI	CTTGAG	1 cut(s)	1282
BpuMI	CCSGG	1 cut(s)	988
BsaJI	CCNNGG	3 cut(s)	369, 1438, 2110
Bsc4I	CCNNNNNNNGG	2 cut(s)	1458, 2063
Bse118I	RCCGGY	3 cut(s)	2161, 2216, 2384
Bse1I	ACTGG	5 cut(s)	86, 474, 553, 1704, 2270
Bse3DI	GCAATG	1 cut(s)	410
BseBI	CCWGG	2 cut(s)	1712, 2076
BseDI	CCNNGG	3 cut(s)	369, 1438, 2110
BseGI	GGATG	5 cut(s)	65, 568, 1069, 1477, 2312
BseLI	CCNNNNNNNGG	2 cut(s)	1458, 2063
BseMI	GCAATG	1 cut(s)	410
BseMII	CTCAG	5 cut(s)	1413, 1530, 1710, 2072, 2212
BseNI	ACTGG	5 cut(s)	86, 474, 553, 1704, 2270
BsePI	GCGCGC	1 cut(s)	154
BseSI	GKGCMC	3 cut(s)	453, 523, 2210
BsgI	GTGCAG	1 cut(s)	678
Bsh1236I	CGCG	6 cut(s)	156, 183, 317, 319, 486, 2204
Bsh1285I	CGRYCG	1 cut(s)	2116
BshFI	GGCC	5 cut(s)	473, 609, 1043, 1731, 2019
BshNI	GGYRCC	2 cut(s)	450, 518
BsiEI	CGRYCG	1 cut(s)	2116
BsiHKAI	GWGCWC	2 cut(s)	1517, 2210
BsiSI	CCGG	7 cut(s)	243, 987, 1044, 1061, 2162, 2217, 2385
BslI	CCNNNNNNNGG	2 cut(s)	1458, 2063
BsmAI	GTCTC	4 cut(s)	246, 735, 1373, 1651
BsmBI	CGTCTC	1 cut(s)	246
BsmI	GAATGC	2 cut(s)	1083, 1585
BsnI	GGCC	5 cut(s)	473, 609, 1043, 1731, 2019
Bsp119I	TTCGAA	1 cut(s)	142
Bsp1286I	GDGCHC	4 cut(s)	453, 523, 1517, 2210
Bsp1407I	TGTACA	1 cut(s)	1635
Bsp1720I	GCTNAGC	1 cut(s)	2198
Bsp19I	CCATGG	2 cut(s)	369, 1438
BspACI	CCGC	7 cut(s)	319, 484, 819, 909, 1012, 1593, 2342
BspANI	GGCC	5 cut(s)	473, 609, 1043, 1731, 2019
BspCNI	CTCAG	5 cut(s)	1412, 1529, 1709, 2071, 2211
BspFNI	CGCG	6 cut(s)	156, 183, 317, 319, 486, 2204
BspLI	GGNNCC	3 cut(s)	452, 520, 856
BspMAI	CTGCAG	2 cut(s)	437, 2496
BspPI	GGATC	3 cut(s)	2066, 2261, 2290
BspT104I	TTCGAA	1 cut(s)	142
BspT107I	GGYRCC	2 cut(s)	450, 518
BsrBI	CCGCTC	1 cut(s)	1012
BsrDI	GCAATG	1 cut(s)	410
BsrFI	RCCGGY	3 cut(s)	2161, 2216, 2384
BsrGI	TGTACA	1 cut(s)	1635
BsrI	ACTGG	5 cut(s)	86, 474, 553, 1704, 2270
BssAI	RCCGGY	3 cut(s)	2161, 2216, 2384
BssECI	CCNNGG	3 cut(s)	369, 1438, 2110
BssHII	GCGCGC	1 cut(s)	154
BssNAI	GTATAC	2 cut(s)	384, 465
BssT1I	CCWWGG	2 cut(s)	369, 1438
Bst1107I	GTATAC	2 cut(s)	384, 465
Bst2UI	CCWGG	2 cut(s)	1712, 2076
Bst4CI	ACNGT	6 cut(s)	327, 859, 1466, 1635, 1737, 1772
Bst6I	CTCTTC	3 cut(s)	1228, 1614, 1824
BstAPI	GCANNNNNTGC	3 cut(s)	224, 689, 797
BstAUI	TGTACA	1 cut(s)	1635
BstBI	TTCGAA	1 cut(s)	142
BstDSI	CCRYGG	2 cut(s)	369, 1438
BstF5I	GGATG	5 cut(s)	65, 568, 1069, 1477, 2312
BstFNI	CGCG	6 cut(s)	156, 183, 317, 319, 486, 2204
BstH2I	RGCGCY	1 cut(s)	1325
BstHHI	GCGC	7 cut(s)	156, 158, 319, 488, 802, 1324, 2204
BstMAI	GTCTC	4 cut(s)	246, 735, 1373, 1651
BstMCI	CGRYCG	1 cut(s)	2116
BstMWI	GCNNNNNNNGC	8 cut(s)	224, 689, 797, 1925, 2016, 2199, 2210, 2252
BstNI	CCWGG	2 cut(s)	1712, 2076
BstNSI	RCATGY	3 cut(s)	795, 997, 1077
BstPAI	GACNNNNGTC	1 cut(s)	1379
BstSCI	CCNGG	3 cut(s)	986, 1710, 2074
BstSFI	CTRYAG	3 cut(s)	433, 2389, 2492
BstSLI	GKGCMC	3 cut(s)	453, 523, 2210
BstUI	CGCG	6 cut(s)	156, 183, 317, 319, 486, 2204
BstV2I	GAAGAC	1 cut(s)	357
BstX2I	RGATCY	1 cut(s)	2458
BstXI	CCANNNNNNTGG	2 cut(s)	530, 1711
BstYI	RGATCY	1 cut(s)	2458
BstZ17I	GTATAC	2 cut(s)	384, 465
BsuI	GTATCC	2 cut(s)	1286, 1589
BsuRI	GGCC	5 cut(s)	473, 609, 1043, 1731, 2019
BtgI	CCRYGG	2 cut(s)	369, 1438
BtgZI	GCGATG	1 cut(s)	1598
BtsCI	GGATG	5 cut(s)	65, 568, 1069, 1477, 2312
BtsI	GCAGTG	2 cut(s)	1492, 2208
BtsIMutI	CAGTG	6 cut(s)	481, 879, 1492, 1777, 2208, 2277
CaiI	CAGNNNCTG	1 cut(s)	2081
CfoI	GCGC	7 cut(s)	156, 158, 319, 488, 802, 1324, 2204
Cfr10I	RCCGGY	3 cut(s)	2161, 2216, 2384
Cfr13I	GGNCC	3 cut(s)	669, 958, 972
CseI	GACGC	1 cut(s)	1118
Csp6I	GTAC	5 cut(s)	89, 492, 991, 1462, 1636
CviQI	GTAC	5 cut(s)	89, 492, 991, 1462, 1636
DraIII	CACNNNGTG	1 cut(s)	2450
EaeI	YGGCCR	4 cut(s)	471, 607, 1041, 1729
Eam1104I	CTCTTC	3 cut(s)	1228, 1614, 1824
EarI	CTCTTC	3 cut(s)	1228, 1614, 1824
Eco130I	CCWWGG	2 cut(s)	369, 1438
Eco47I	GGWCC	3 cut(s)	669, 958, 972
Eco47III	AGCGCT	1 cut(s)	1323
Eco57I	CTGAAG	1 cut(s)	1338
EcoO109I	RGGNCCY	1 cut(s)	958
EcoRI	GAATTC	4 cut(s)	439, 1000, 1882, 2144
EcoRII	CCWGG	2 cut(s)	1710, 2074
EcoT14I	CCWWGG	2 cut(s)	369, 1438
EcoT22I	ATGCAT	1 cut(s)	2314
ErhI	CCWWGG	2 cut(s)	369, 1438
Esp3I	CGTCTC	1 cut(s)	246
FauI	CCCGC	1 cut(s)	1005
FauNDI	CATATG	2 cut(s)	1900, 2239
FbaI	TGATCA	3 cut(s)	511, 1255, 1446
FblI	GTMKAC	2 cut(s)	383, 464
FokI	GGATG	5 cut(s)	52, 575, 1076, 1484, 2299
FspBI	CTAG	3 cut(s)	777, 1533, 2477
GlaI	GCGC	7 cut(s)	155, 157, 318, 487, 801, 1323, 2203
HaeII	RGCGCY	1 cut(s)	1325
HaeIII	GGCC	5 cut(s)	473, 609, 1043, 1731, 2019
HapII	CCGG	7 cut(s)	243, 987, 1044, 1061, 2162, 2217, 2385
HgaI	GACGC	1 cut(s)	1118
HhaI	GCGC	7 cut(s)	156, 158, 319, 488, 802, 1324, 2204
Hin6I	GCGC	7 cut(s)	154, 156, 317, 486, 800, 1322, 2202
HinP1I	GCGC	7 cut(s)	154, 156, 317, 486, 800, 1322, 2202
HindIII	AAGCTT	1 cut(s)	1170
HinfI	GANTC	8 cut(s)	232, 1152, 1214, 1244, 1366, 2048, 2104, 2488
HpaII	CCGG	7 cut(s)	243, 987, 1044, 1061, 2162, 2217, 2385
HphI	GGTGA	5 cut(s)	11, 923, 1441, 2356, 2386
Hpy166II	GTNNAC	6 cut(s)	384, 465, 972, 1103, 1638, 2208
Hpy188I	TCNGA	7 cut(s)	193, 427, 445, 1036, 1318, 1494, 1935
Hpy8I	GTNNAC	6 cut(s)	384, 465, 972, 1103, 1638, 2208
Hpy99I	CGWCG	1 cut(s)	42
HpyAV	CCTTC	5 cut(s)	843, 1283, 1397, 1940, 1948
HpyCH4III	ACNGT	6 cut(s)	327, 859, 1466, 1635, 1737, 1772
HpyCH4IV	ACGT	7 cut(s)	467, 597, 648, 867, 1376, 1415, 1869
HpyF10VI	GCNNNNNNNGC	8 cut(s)	224, 689, 797, 1925, 2016, 2199, 2210, 2252
HpySE526I	ACGT	7 cut(s)	467, 597, 648, 867, 1376, 1415, 1869
HspAI	GCGC	7 cut(s)	154, 156, 317, 486, 800, 1322, 2202
Ksp22I	TGATCA	3 cut(s)	511, 1255, 1446
LmnI	GCTCC	1 cut(s)	2190
LweI	GCATC	5 cut(s)	74, 1216, 1336, 1519, 2321
MaeI	CTAG	3 cut(s)	777, 1533, 2477
MaeII	ACGT	7 cut(s)	467, 597, 648, 867, 1376, 1415, 1869
MaeIII	GTNAC	6 cut(s)	355, 661, 1706, 1783, 1865, 2101
MbiI	CCGCTC	1 cut(s)	1012
MboII	GAAGA	9 cut(s)	266, 357, 746, 1192, 1245, 1631, 1841, 1934, 2039
MfeI	CAATTG	1 cut(s)	2178
MflI	RGATCY	1 cut(s)	2458
MhlI	GDGCHC	4 cut(s)	453, 523, 1517, 2210
MlsI	TGGCCA	3 cut(s)	473, 609, 1731
MluNI	TGGCCA	3 cut(s)	473, 609, 1731
MlyI	GAGTC	3 cut(s)	1161, 1375, 2098
MmeI	TCCRAC	3 cut(s)	216, 1034, 1859
Mox20I	TGGCCA	3 cut(s)	473, 609, 1731
Mph1103I	ATGCAT	1 cut(s)	2314
MroXI	GAANNNNTTC	2 cut(s)	935, 1929
MscI	TGGCCA	3 cut(s)	473, 609, 1731
MseI	TTAA	6 cut(s)	879, 1023, 1116, 1755, 1848, 2499
MslI	CAYNNNNRTG	8 cut(s)	288, 456, 615, 837, 1140, 1571, 1757, 1985
Msp20I	TGGCCA	3 cut(s)	473, 609, 1731
MspA1I	CMGCKG	1 cut(s)	1403
MspI	CCGG	7 cut(s)	243, 987, 1044, 1061, 2162, 2217, 2385
MspR9I	CCNGG	3 cut(s)	988, 1712, 2076
MunI	CAATTG	1 cut(s)	2178
Mva1269I	GAATGC	2 cut(s)	1083, 1585
MvaI	CCWGG	2 cut(s)	1712, 2076
MvnI	CGCG	6 cut(s)	156, 183, 317, 319, 486, 2204
MwoI	GCNNNNNNNGC	8 cut(s)	224, 689, 797, 1925, 2016, 2199, 2210, 2252
NciI	CCSGG	1 cut(s)	988
NcoI	CCATGG	2 cut(s)	369, 1438
NdeI	CATATG	2 cut(s)	1900, 2239
NlaIV	GGNNCC	3 cut(s)	452, 520, 856
NmeAIII	GCCGAG	1 cut(s)	1389
NmuCI	GTSAC	3 cut(s)	1783, 1865, 2101
NsiI	ATGCAT	1 cut(s)	2314
NspI	RCATGY	3 cut(s)	795, 997, 1077
NspV	TTCGAA	1 cut(s)	142
OliI	CACNNNNGTG	1 cut(s)	1985
PaeI	GCATGC	1 cut(s)	1077
PauI	GCGCGC	1 cut(s)	154
PcsI	WCGNNNNNNNCGW	3 cut(s)	594, 974, 1361
PctI	GAATGC	2 cut(s)	1083, 1585
PdmI	GAANNNNTTC	2 cut(s)	935, 1929
PfeI	GAWTC	5 cut(s)	232, 1214, 1244, 2048, 2488
PfoI	TCCNGGA	1 cut(s)	2074
PleI	GAGTC	3 cut(s)	1160, 1374, 2098
PpsI	GAGTC	3 cut(s)	1160, 1374, 2098
PpuMI	RGGWCCY	1 cut(s)	958
PshAI	GACNNNNGTC	1 cut(s)	1379
Psp5II	RGGWCCY	1 cut(s)	958
Psp6I	CCWGG	2 cut(s)	1710, 2074
PspGI	CCWGG	2 cut(s)	1710, 2074
PspN4I	GGNNCC	3 cut(s)	452, 520, 856
PspPI	GGNCC	3 cut(s)	669, 958, 972
PspPPI	RGGWCCY	1 cut(s)	958
PstI	CTGCAG	2 cut(s)	437, 2496
PstNI	CAGNNNCTG	1 cut(s)	2081
PsuI	RGATCY	1 cut(s)	2458
PteI	GCGCGC	1 cut(s)	154
PvuII	CAGCTG	1 cut(s)	1403
RsaI	GTAC	5 cut(s)	90, 493, 992, 1463, 1637
RsaNI	GTAC	5 cut(s)	89, 492, 991, 1462, 1636
RseI	CAYNNNNRTG	8 cut(s)	288, 456, 615, 837, 1140, 1571, 1757, 1985
SaqAI	TTAA	6 cut(s)	879, 1023, 1116, 1755, 1848, 2499
Sau96I	GGNCC	3 cut(s)	669, 958, 972
SchI	GAGTC	3 cut(s)	1161, 1375, 2098
ScrFI	CCNGG	3 cut(s)	988, 1712, 2076
SduI	GDGCHC	4 cut(s)	453, 523, 1517, 2210
SfaNI	GCATC	5 cut(s)	74, 1216, 1336, 1519, 2321
SfcI	CTRYAG	3 cut(s)	433, 2389, 2492
SfuI	TTCGAA	1 cut(s)	142
SinI	GGWCC	3 cut(s)	669, 958, 972
SmiMI	CAYNNNNRTG	8 cut(s)	288, 456, 615, 837, 1140, 1571, 1757, 1985
SmlI	CTYRAG	1 cut(s)	1297
SmoI	CTYRAG	1 cut(s)	1297
SphI	GCATGC	1 cut(s)	1077
SsiI	CCGC	7 cut(s)	319, 484, 819, 909, 1012, 1593, 2342
SspI	AATATT	2 cut(s)	1845, 2305
SspMI	CTAG	3 cut(s)	777, 1533, 2477
StyD4I	CCNGG	3 cut(s)	986, 1710, 2074
StyI	CCWWGG	2 cut(s)	369, 1438
TaaI	ACNGT	6 cut(s)	327, 859, 1466, 1635, 1737, 1772
TaiI	ACGT	7 cut(s)	470, 600, 651, 870, 1379, 1418, 1872
TaqI	TCGA	8 cut(s)	142, 165, 250, 588, 939, 1287, 1545, 1655
TaqII	GACCGA	1 cut(s)	2102
TatI	WGTACW	1 cut(s)	1635
TauI	GCSGC	1 cut(s)	822
TfiI	GAWTC	5 cut(s)	232, 1214, 1244, 2048, 2488
Tru1I	TTAA	6 cut(s)	879, 1023, 1116, 1755, 1848, 2499
Tru9I	TTAA	6 cut(s)	879, 1023, 1116, 1755, 1848, 2499
TscAI	CASTG	6 cut(s)	481, 879, 1492, 1777, 2215, 2277
TseFI	GTSAC	3 cut(s)	1783, 1865, 2101
Tsp45I	GTSAC	3 cut(s)	1783, 1865, 2101
TspRI	CASTG	6 cut(s)	481, 879, 1492, 1777, 2215, 2277
VneI	GTGCAC	1 cut(s)	2206
VpaK11BI	GGWCC	3 cut(s)	669, 958, 972
XapI	RAATTY	7 cut(s)	43, 439, 806, 1000, 1673, 1882, 2144
XbaI	TCTAGA	1 cut(s)	2476
XceI	RCATGY	3 cut(s)	795, 997, 1077
XmiI	GTMKAC	2 cut(s)	383, 464
XmnI	GAANNNNTTC	2 cut(s)	935, 1929
XspI	CTAG	3 cut(s)	777, 1533, 2477
Zsp2I	ATGCAT	1 cut(s)	2314

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.