Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0007239

Physical Location & Seq

Genomic Coordinates Reverse (-)

17753964 .. 17756498

Gene Structure 2535 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G172600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2535 bp

ATGAGAAACTTTGCACTGCACCTAAGACATTGTCAGAAGAAGATTACCAAGACACAAGCCCTCAACTTCTCCACCTTTGCGTGCCCTGTTCTTCAGTCACAAGACCCATGTCTTCCAATCCAAAATCTCCAAAGCAGAAGGCGGGCATTGGTCAACCTCTTACAACTACGCGTTTCAGACCAACCCATTTGGTACGACAAGAGAATGCATGCCCAGGTTGTCGTATCGGGCTTTCAAGATGATGTTTTTCTTGCTAATCTTCTATTGCACTCTTACGCGAAATCTGACTGTATTGTTTACGCGCGGAAACTGTTTGATAAAATGCCTGAAAAGAACTCAGTTACTTGGTCCTCTATGGTTTCTATGTATACCAAGCATGGTAATGACGAAGAAGCATTGGTGATGTTTTCAGAGTTCTGCCGGAATTCCGATGGGAAGCCGAATGAGTATACTTTAGCTAGTGTTATTCGGGCTTGTACGCGATTGGGAGGGGTTGATCAAGGTGCTCAAGTGCATAGTTTTGTTGCGAAGACTGGTTTTGATCAGGAAGTTTATGTGGGTACTTCTTTAGTCGATTTTTACTCAAAAAATGGTGATATAGAAGAAGCAAAACTAATTTTTGAAGGTTTAAAAGTAAAAAGTGCAGTTACTTGGACTATCATGATATCAGGGTATGCAAAATGTGGAAGAAGTGAAGTATCTTTGAAACTGTTCAACCAAATGAGAGACACTGACGTTCTTCCTGATAAATATGTGCTTTCTAGTCTTCTGACCGCATGTTCTGCTCTCAAGTTCATTGGAGGTGGCAAGCAAATCCATGCTTATGTCCTTAGAAGGGGAACAGTAATGGATGTTTCAGTTGTTAATGTACTTGTAGATTTCTACGCAAAGTGCGGTGAAGTGCAGGCAGGACGAAAGCTATTCAATACAATAGTAGTCAAGGACCTCATTTCATGGACCACAATGATAGCTGGGTATATGCAAAACTCATTTAACCGGGAGGCTGTTAAGCTATTTTCTGAAATGGCCAGATTGGGTTGGAAGCTAGATGGATTCGGGTGCAGTAGTATTCTTACTTCGTGTGCTTCACTTGAGGCCCTTGATCATGGGAGAGAAGTGCACGCGTATGCTATCAGAGTTAATCTTGTTTATGAAGATTATGTGAAGAATAGTTTGATTGATATGTATGCAAAATGTGATTCCCTTACTAATGCAAGACGAGTTTTTGATTCAATGGCTGATCATAATGTGGTCTCTTACAATGCAATGATTGAAGGATACTCAAGACAGGATAAGATGTCTGAAGCTCTGGATCTTTTCAACGAGATGAGGCTTAGATTGCTCCACCCGAGTCTCTTGACATTCGTTAGCCTTCTTGGTGTCTCAGCTGCTTTATTTGCATTGGAATTGAGCAAGCAAATCCATGGTCTGGTCACCAAATATGGGTACTGTTTGGACGTATTTGCTGGCAGTGCTCTCATAGATGTTTATTCTAAGTGCTCATTTATTAGTGATGCCAGACTTGTATTCGAGGAGATGTATGAGAAAGACATTGTAGTGTGGAATGCGATGTTCTGCGGATACACCCAACAGCTGGAAAGTGAAGAGGCTCTCAAGTTATACTTGGAATTACAGTTATCAAGACAAAACCCCAATGAATTTACTTTTGCTGCCCTAGTCTCAGCTGCCAGTAACCTAGCAAGTATCCAGCATGGTCAACAGTTCCATAACCAGCTCATTAAGATGGGTCTTGACAGTGATCCATTTGTCACAAATGCCCTCGTGGATATGTATTCCAATTGTGGAAGCATTGAAGAGGCTTGCAAAATATTTGATTCCAAAATTTGGAGCGATGTTGCCTGTTGGAATTCCATAATCTCAACATATGCCCAACATGGAGAAGCAGAACAAGCCCTTATTATGTTTGATAGAATGATGAAGGAGCAAATAAAACCCAACTTTATCACATTTGTGGGTGTGCTATCAGCTTGTAGCCATGCAGGCCTTGTGGATGATGGACTTCGCCACTTTGAATCAATGCCTCAGTTTGGAATCGAACCAGGGACAGAGCATTATGCTTGCATAGTTTCTCTCCTGGGTCGTGCTGGTAAATTATTTGAAGCTAAGGAATTTGTTATGAAAATGCCGATAAAACCACCAGCGATTGTATGGAGGAGCTTGCTCAGTGCATGCACAGCTGCAGGCAACATTGAATTGGGGAGGTATGCAGCAGAGATGGCAATTTTGAGTGATCCAGTAGATAGTGGATCATATATCTTACTTTCAAATATTTATGCATCCAAAGGTATGTGGGCTGATGTCAAGAGGGTGAGGGAAAAAATGGAATACAATGGGGTGGTGAAAGAAACTGGGCGAAGTTGGGTTGAAGCGAATAACGAAGTTCATACATTTGCTGCGAAAGATAGAACGCATCGCAAGACCGGTCTTATACTTTCAATTCTAGACAGTTTGATTCTGCAGATGAAAGGGCTTGGTTATGTGCCTGACACTACGACACTTCTGATAAATGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

845

Amino Acids

94.58

Weight (kDa)

6.4

Isoelectric Point (pI)

44.4

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007239)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G39530
fragaria_vesca	FvH4_1g22400 FvH4_1g22550
malus_domestica	MD01G1019600.v1.1
prunus_persica	Prupe.6G172600_v2.0.a1
pyrus_communis	pycom01g04910
rosa_chinensis	RchiOBHm_Chr2g0116541
rosa_laevigata	RLG00000018286
rosa_multiflora	Rmu_sc0001287.1_g000020 Rmu_sc0001287.1_g000021 Rmu_sc0003255.1_g000001 Rmu_sc0003255.1_g000019 Rmu_sc0004191.1_g000031
rosa_roxburghii	Rroxscaffold_2G00127080 Rroxscaffold_2G00127100
rosa_rugosa	Rorug02G0207400 Rorug02G0207500
rosa_samantha	Rh2AG262400 Rh2BG273600 Rh2BG273900 Rh2BG274000 Rh2DG265300 Rh2DG270600 Rh2DG289100
rosa_wichuraiana	Rw2G020660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	3 cut(s)	1429, 1594, 1845
AccI	GTMKAC	2 cut(s)	368, 449
AccII	CGCG	6 cut(s)	171, 278, 302, 304, 481, 1124
AciI	CCGC	5 cut(s)	142, 304, 774, 894, 1578
AclWI	GGATC	4 cut(s)	1320, 1754, 2246, 2275
AcoI	YGGCCR	1 cut(s)	1026
AcsI	RAATTY	5 cut(s)	424, 1658, 1842, 1867, 2129
AcuI	CTGAAG	2 cut(s)	77, 1323
AfaI	GTAC	5 cut(s)	194, 478, 562, 870, 1448
AfiI	CCNNNNNNNGG	6 cut(s)	835, 1429, 1443, 1594, 1845, 2048
AflIII	ACRYGT	2 cut(s)	169, 1122
AgeI	ACCGGT	1 cut(s)	2441
AjnI	CCWGG	3 cut(s)	213, 2059, 2094
AleI	CACNNNNGTG	1 cut(s)	1970
Alw21I	GWGCWC	4 cut(s)	508, 1122, 1477, 1502
Alw26I	GTCTC	5 cut(s)	720, 1258, 1358, 1387, 1684
Alw44I	GTGCAC	1 cut(s)	1118
AlwI	GGATC	4 cut(s)	1320, 1754, 2246, 2275
Ama87I	CYCGRG	1 cut(s)	1348
AoxI	GGCC	3 cut(s)	1026, 1095, 2002
ApaLI	GTGCAC	1 cut(s)	1118
ApeKI	GCWGC	6 cut(s)	1388, 1670, 1685, 2198, 2228, 2414
ApoI	RAATTY	5 cut(s)	424, 1658, 1842, 1867, 2129
ArsI	GACNNNNNNTTYG	2 cut(s)	1411, 1443
AsiGI	ACCGGT	1 cut(s)	2441
Asp700I	GAANNNNTTC	1 cut(s)	710
AspLEI	GCGC	1 cut(s)	304
AspS9I	GGNCC	4 cut(s)	348, 943, 957, 1096
AsuC2I	CCSGG	1 cut(s)	998
AsuHPI	GGTGA	6 cut(s)	412, 605, 908, 1426, 2341, 2371
AvaI	CYCGRG	1 cut(s)	1348
AvaII	GGWCC	3 cut(s)	348, 943, 957
BaeGI	GKGCMC	2 cut(s)	86, 1122
BalI	TGGCCA	1 cut(s)	1028
BarI	GAAGNNNNNNTAC	2 cut(s)	1060, 1092
BauI	CACGAG	1 cut(s)	1781
BbsI	GAAGAC	3 cut(s)	104, 536, 758
Bbv12I	GWGCWC	4 cut(s)	508, 1122, 1477, 1502
BbvI	GCAGC	6 cut(s)	1375, 1657, 1672, 2185, 2240, 2401
BccI	CCATC	5 cut(s)	425, 1043, 1738, 2009, 2230
BciT130I	CCWGG	3 cut(s)	215, 2061, 2096
BciVI	GTATCC	3 cut(s)	1271, 1574, 1715
BclI	TGATCA	4 cut(s)	496, 541, 1102, 1240
BcnI	CCSGG	1 cut(s)	998
BcoDI	GTCTC	5 cut(s)	720, 1258, 1358, 1387, 1684
BfaI	CTAG	6 cut(s)	459, 762, 1046, 1676, 1697, 2462
BfmI	CTRYAG	2 cut(s)	2199, 2477
BfuI	GTATCC	3 cut(s)	1271, 1574, 1715
BglI	GCCNNNNNGGC	1 cut(s)	2001
BisI	GCNGC	6 cut(s)	1389, 1671, 1686, 2199, 2229, 2415
BlsI	GCNGC	6 cut(s)	1390, 1672, 1687, 2200, 2230, 2416
Bme1390I	CCNGG	4 cut(s)	215, 998, 2061, 2096
Bme18I	GGWCC	3 cut(s)	348, 943, 957
BmeT110I	CYCGRG	1 cut(s)	1348
BmgT120I	GGNCC	4 cut(s)	348, 943, 957, 1096
BmrFI	CCNGG	4 cut(s)	215, 998, 2061, 2096
BmrI	ACTGGG	1 cut(s)	2379
BmsI	GCATC	3 cut(s)	1504, 2306, 2440
BmuI	ACTGGG	1 cut(s)	2379
BoxI	GACNNNNGTC	1 cut(s)	108
BpiI	GAAGAC	3 cut(s)	104, 536, 758
Bpu10I	CCTNAGC	1 cut(s)	2124
BpuEI	CTTGAG	5 cut(s)	492, 773, 1112, 1267, 1598
BpuMI	CCSGG	1 cut(s)	998
BsaI	GGTCTC	1 cut(s)	1258
BsaJI	CCNNGG	4 cut(s)	213, 1423, 2060, 2095
BsaWI	WCCGGW	1 cut(s)	2441
Bsc4I	CCNNNNNNNGG	6 cut(s)	835, 1429, 1443, 1594, 1845, 2048
Bse118I	RCCGGY	1 cut(s)	2441
Bse1I	ACTGG	4 cut(s)	538, 1689, 2255, 2374
Bse3DI	GCAATG	1 cut(s)	1272
BseBI	CCWGG	3 cut(s)	215, 2061, 2096
BseDI	CCNNGG	4 cut(s)	213, 1423, 2060, 2095
BseGI	GGATG	3 cut(s)	856, 2017, 2297
BseLI	CCNNNNNNNGG	6 cut(s)	835, 1429, 1443, 1594, 1845, 2048
BseMI	GCAATG	1 cut(s)	1272
BseMII	CTCAG	5 cut(s)	351, 1398, 1695, 2057, 2197
BseNI	ACTGG	4 cut(s)	538, 1689, 2255, 2374
BseRI	GAGGAG	2 cut(s)	1547, 2188
BseSI	GKGCMC	2 cut(s)	86, 1122
BseXI	GCAGC	6 cut(s)	1375, 1657, 1672, 2185, 2240, 2401
BseYI	CCCAGC	1 cut(s)	971
BsgI	GTGCAG	3 cut(s)	663, 923, 1081
Bsh1236I	CGCG	6 cut(s)	171, 278, 302, 304, 481, 1124
BshFI	GGCC	3 cut(s)	1028, 1097, 2004
BshTI	ACCGGT	1 cut(s)	2441
BsiHKAI	GWGCWC	4 cut(s)	508, 1122, 1477, 1502
BsiHKCI	CYCGRG	1 cut(s)	1348
BsiSI	CCGG	3 cut(s)	421, 997, 2442
BslFI	GGGAC	1 cut(s)	2077
BslI	CCNNNNNNNGG	6 cut(s)	835, 1429, 1443, 1594, 1845, 2048
BsmAI	GTCTC	5 cut(s)	720, 1258, 1358, 1387, 1684
BsmFI	GGGAC	1 cut(s)	2077
BsmI	GAATGC	2 cut(s)	210, 1570
BsnI	GGCC	3 cut(s)	1028, 1097, 2004
Bso31I	GGTCTC	1 cut(s)	1258
BsoBI	CYCGRG	1 cut(s)	1348
Bsp1286I	GDGCHC	5 cut(s)	86, 508, 1122, 1477, 1502
Bsp143I	GATC	8 cut(s)	496, 541, 1102, 1240, 1312, 1759, 2251, 2267
Bsp19I	CCATGG	1 cut(s)	1423
BspACI	CCGC	5 cut(s)	142, 304, 774, 894, 1578
BspANI	GGCC	3 cut(s)	1028, 1097, 2004
BspCNI	CTCAG	5 cut(s)	350, 1397, 1694, 2056, 2196
BspFNI	CGCG	6 cut(s)	171, 278, 302, 304, 481, 1124
BspHI	TCATGA	1 cut(s)	660
BspMAI	CTGCAG	2 cut(s)	2203, 2481
BspPI	GGATC	4 cut(s)	1320, 1754, 2246, 2275
BspTNI	GGTCTC	1 cut(s)	1258
BsrDI	GCAATG	1 cut(s)	1272
BsrFI	RCCGGY	1 cut(s)	2441
BsrI	ACTGG	4 cut(s)	538, 1689, 2255, 2374
BssAI	RCCGGY	1 cut(s)	2441
BssECI	CCNNGG	4 cut(s)	213, 1423, 2060, 2095
BssMI	GATC	8 cut(s)	496, 541, 1102, 1240, 1312, 1759, 2251, 2267
BssNAI	GTATAC	2 cut(s)	369, 450
BssSI	CACGAG	1 cut(s)	1781
BssT1I	CCWWGG	1 cut(s)	1423
Bst1107I	GTATAC	2 cut(s)	369, 450
Bst2BI	CACGAG	1 cut(s)	1781
Bst2UI	CCWGG	3 cut(s)	215, 2061, 2096
Bst4CI	ACNGT	9 cut(s)	290, 312, 711, 844, 1451, 1635, 1722, 1757, 2468
Bst6I	CTCTTC	2 cut(s)	1599, 1809
BstAPI	GCANNNNNTGC	1 cut(s)	782
BstDSI	CCRYGG	1 cut(s)	1423
BstEII	GGTNACC	1 cut(s)	1432
BstF5I	GGATG	3 cut(s)	856, 2017, 2297
BstFNI	CGCG	6 cut(s)	171, 278, 302, 304, 481, 1124
BstHHI	GCGC	1 cut(s)	304
BstKTI	GATC	8 cut(s)	499, 544, 1105, 1243, 1315, 1762, 2254, 2270
BstMAI	GTCTC	5 cut(s)	720, 1258, 1358, 1387, 1684
BstMBI	GATC	8 cut(s)	496, 541, 1102, 1240, 1312, 1759, 2251, 2267
BstMWI	GCNNNNNNNGC	8 cut(s)	782, 1339, 1397, 1472, 1910, 2001, 2195, 2237
BstNI	CCWGG	3 cut(s)	215, 2061, 2096
BstNSI	RCATGY	3 cut(s)	212, 780, 2193
BstPAI	GACNNNNGTC	1 cut(s)	108
BstPI	GGTNACC	1 cut(s)	1432
BstSCI	CCNGG	4 cut(s)	213, 996, 2059, 2094
BstSFI	CTRYAG	2 cut(s)	2199, 2477
BstSLI	GKGCMC	2 cut(s)	86, 1122
BstUI	CGCG	6 cut(s)	171, 278, 302, 304, 481, 1124
BstV1I	GCAGC	6 cut(s)	1375, 1657, 1672, 2185, 2240, 2401
BstV2I	GAAGAC	3 cut(s)	104, 536, 758
BstX2I	RGATCY	1 cut(s)	1312
BstYI	RGATCY	1 cut(s)	1312
BstZ17I	GTATAC	2 cut(s)	369, 450
BsuI	GTATCC	3 cut(s)	1271, 1574, 1715
BsuRI	GGCC	3 cut(s)	1028, 1097, 2004
BtgI	CCRYGG	1 cut(s)	1423
BtgZI	GCGATG	3 cut(s)	1583, 1866, 2417
BtsCI	GGATG	3 cut(s)	856, 2017, 2297
BtsI	GCAGTG	2 cut(s)	14, 1477
BtsIMutI	CAGTG	5 cut(s)	14, 729, 1477, 1762, 2191
CciI	TCATGA	1 cut(s)	660
CfoI	GCGC	1 cut(s)	304
Cfr10I	RCCGGY	1 cut(s)	2441
Cfr13I	GGNCC	4 cut(s)	348, 943, 957, 1096
Csp6I	GTAC	5 cut(s)	193, 477, 561, 869, 1447
CspAI	ACCGGT	1 cut(s)	2441
CviQI	GTAC	5 cut(s)	193, 477, 561, 869, 1447
DpnI	GATC	8 cut(s)	498, 543, 1104, 1242, 1314, 1761, 2253, 2269
DpnII	GATC	8 cut(s)	496, 541, 1102, 1240, 1312, 1759, 2251, 2267
DraI	TTTAAA	1 cut(s)	630
EaeI	YGGCCR	1 cut(s)	1026
Eam1104I	CTCTTC	2 cut(s)	1599, 1809
EarI	CTCTTC	2 cut(s)	1599, 1809
Eco130I	CCWWGG	1 cut(s)	1423
Eco147I	AGGCCT	1 cut(s)	2004
Eco31I	GGTCTC	1 cut(s)	1258
Eco32I	GATATC	1 cut(s)	666
Eco47I	GGWCC	3 cut(s)	348, 943, 957
Eco57I	CTGAAG	2 cut(s)	77, 1323
Eco88I	CYCGRG	1 cut(s)	1348
Eco91I	GGTNACC	1 cut(s)	1432
EcoO109I	RGGNCCY	2 cut(s)	943, 1096
EcoO65I	GGTNACC	1 cut(s)	1432
EcoRI	GAATTC	2 cut(s)	424, 1867
EcoRII	CCWGG	3 cut(s)	213, 2059, 2094
EcoRV	GATATC	1 cut(s)	666
EcoT14I	CCWWGG	1 cut(s)	1423
EcoT22I	ATGCAT	2 cut(s)	210, 2299
ErhI	CCWWGG	1 cut(s)	1423
FalI	AAGNNNNNCTT	2 cut(s)	1607, 1639
FaqI	GGGAC	1 cut(s)	2077
FauI	CCCGC	1 cut(s)	135
FauNDI	CATATG	1 cut(s)	1885
FbaI	TGATCA	4 cut(s)	496, 541, 1102, 1240
FblI	GTMKAC	2 cut(s)	368, 449
Fnu4HI	GCNGC	6 cut(s)	1389, 1671, 1686, 2199, 2229, 2415
FokI	GGATG	3 cut(s)	863, 2024, 2284
Fsp4HI	GCNGC	6 cut(s)	1389, 1671, 1686, 2199, 2229, 2415
FspBI	CTAG	6 cut(s)	459, 762, 1046, 1676, 1697, 2462
GlaI	GCGC	1 cut(s)	303
GluI	GCNGC	6 cut(s)	1389, 1671, 1686, 2199, 2229, 2415
GsaI	CCCAGC	1 cut(s)	975
HaeIII	GGCC	3 cut(s)	1028, 1097, 2004
HapII	CCGG	3 cut(s)	421, 997, 2442
HhaI	GCGC	1 cut(s)	304
Hin6I	GCGC	1 cut(s)	302
HinP1I	GCGC	1 cut(s)	302
HincII	GTYRAC	2 cut(s)	154, 1718
HindII	GTYRAC	2 cut(s)	154, 1718
HinfI	GANTC	8 cut(s)	1053, 1199, 1229, 1351, 1835, 2033, 2052, 2473
HpaII	CCGG	3 cut(s)	421, 997, 2442
HphI	GGTGA	6 cut(s)	412, 605, 908, 1426, 2341, 2371
Hpy166II	GTNNAC	6 cut(s)	154, 298, 369, 450, 1120, 1718
Hpy8I	GTNNAC	6 cut(s)	154, 298, 369, 450, 1120, 1718
HpyAV	CCTTC	6 cut(s)	132, 617, 828, 1268, 1382, 1933
HpyCH4III	ACNGT	9 cut(s)	290, 312, 711, 844, 1451, 1635, 1722, 1757, 2468
HpyCH4IV	ACGT	2 cut(s)	735, 1458
HpyF10VI	GCNNNNNNNGC	8 cut(s)	782, 1339, 1397, 1472, 1910, 2001, 2195, 2237
HpySE526I	ACGT	2 cut(s)	735, 1458
HspAI	GCGC	1 cut(s)	302
Ksp22I	TGATCA	4 cut(s)	496, 541, 1102, 1240
Kzo9I	GATC	8 cut(s)	496, 541, 1102, 1240, 1312, 1759, 2251, 2267
LmnI	GCTCC	4 cut(s)	1347, 1848, 1942, 2175
Lsp1109I	GCAGC	6 cut(s)	1375, 1657, 1672, 2185, 2240, 2401
LweI	GCATC	3 cut(s)	1504, 2306, 2440
MaeI	CTAG	6 cut(s)	459, 762, 1046, 1676, 1697, 2462
MaeII	ACGT	2 cut(s)	735, 1458
MaeIII	GTNAC	6 cut(s)	96, 340, 646, 1432, 1691, 1768
MalI	GATC	8 cut(s)	498, 543, 1104, 1242, 1314, 1761, 2253, 2269
MboI	GATC	8 cut(s)	496, 541, 1102, 1240, 1312, 1759, 2251, 2267
MfeI	CAATTG	1 cut(s)	1798
MflI	RGATCY	1 cut(s)	1312
MhlI	GDGCHC	5 cut(s)	86, 508, 1122, 1477, 1502
MlsI	TGGCCA	1 cut(s)	1028
MluI	ACGCGT	2 cut(s)	169, 1122
MluNI	TGGCCA	1 cut(s)	1028
MlyI	GAGTC	1 cut(s)	1360
MmeI	TCCRAC	2 cut(s)	1019, 1844
Mox20I	TGGCCA	1 cut(s)	1028
Mph1103I	ATGCAT	2 cut(s)	210, 2299
MroXI	GAANNNNTTC	1 cut(s)	710
MscI	TGGCCA	1 cut(s)	1028
MseI	TTAA	6 cut(s)	629, 864, 993, 1008, 1140, 1740
MslI	CAYNNNNRTG	6 cut(s)	381, 822, 1125, 1556, 1742, 1970
Msp20I	TGGCCA	1 cut(s)	1028
MspA1I	CMGCKG	4 cut(s)	1388, 1594, 1685, 2198
MspI	CCGG	3 cut(s)	421, 997, 2442
MspR9I	CCNGG	4 cut(s)	215, 998, 2061, 2096
MunI	CAATTG	1 cut(s)	1798
Mva1269I	GAATGC	2 cut(s)	210, 1570
MvaI	CCWGG	3 cut(s)	215, 2061, 2096
MvnI	CGCG	6 cut(s)	171, 278, 302, 304, 481, 1124
MwoI	GCNNNNNNNGC	8 cut(s)	782, 1339, 1397, 1472, 1910, 2001, 2195, 2237
NciI	CCSGG	1 cut(s)	998
NcoI	CCATGG	1 cut(s)	1423
NdeI	CATATG	1 cut(s)	1885
NdeII	GATC	8 cut(s)	496, 541, 1102, 1240, 1312, 1759, 2251, 2267
NmuCI	GTSAC	3 cut(s)	96, 1432, 1768
NsiI	ATGCAT	2 cut(s)	210, 2299
NspI	RCATGY	3 cut(s)	212, 780, 2193
OliI	CACNNNNGTG	1 cut(s)	1970
PaeI	GCATGC	2 cut(s)	212, 2193
PagI	TCATGA	1 cut(s)	660
PceI	AGGCCT	1 cut(s)	2004
PctI	GAATGC	2 cut(s)	210, 1570
PdmI	GAANNNNTTC	1 cut(s)	710
PfeI	GAWTC	7 cut(s)	1053, 1199, 1229, 1835, 2033, 2052, 2473
PflFI	GACNNNGTC	1 cut(s)	30
PflMI	CCANNNNNTGG	3 cut(s)	1429, 1594, 1845
PinAI	ACCGGT	1 cut(s)	2441
PkrI	GCNGC	6 cut(s)	1390, 1672, 1687, 2200, 2230, 2416
PleI	GAGTC	1 cut(s)	1359
PpsI	GAGTC	1 cut(s)	1359
PpuMI	RGGWCCY	1 cut(s)	943
PshAI	GACNNNNGTC	1 cut(s)	108
Psp5II	RGGWCCY	1 cut(s)	943
Psp6I	CCWGG	3 cut(s)	213, 2059, 2094
PspEI	GGTNACC	1 cut(s)	1432
PspFI	CCCAGC	1 cut(s)	971
PspGI	CCWGG	3 cut(s)	213, 2059, 2094
PspPI	GGNCC	4 cut(s)	348, 943, 957, 1096
PspPPI	RGGWCCY	1 cut(s)	943
PstI	CTGCAG	2 cut(s)	2203, 2481
PsuI	RGATCY	1 cut(s)	1312
PsyI	GACNNNGTC	1 cut(s)	30
PvuII	CAGCTG	4 cut(s)	1388, 1594, 1685, 2198
RsaI	GTAC	5 cut(s)	194, 478, 562, 870, 1448
RsaNI	GTAC	5 cut(s)	193, 477, 561, 869, 1447
RseI	CAYNNNNRTG	6 cut(s)	381, 822, 1125, 1556, 1742, 1970
SaqAI	TTAA	6 cut(s)	629, 864, 993, 1008, 1140, 1740
SatI	GCNGC	6 cut(s)	1389, 1671, 1686, 2199, 2229, 2415
Sau3AI	GATC	8 cut(s)	496, 541, 1102, 1240, 1312, 1759, 2251, 2267
Sau96I	GGNCC	4 cut(s)	348, 943, 957, 1096
SchI	GAGTC	1 cut(s)	1360
ScrFI	CCNGG	4 cut(s)	215, 998, 2061, 2096
SduI	GDGCHC	5 cut(s)	86, 508, 1122, 1477, 1502
SfaNI	GCATC	3 cut(s)	1504, 2306, 2440
SfcI	CTRYAG	2 cut(s)	2199, 2477
SinI	GGWCC	3 cut(s)	348, 943, 957
SmiMI	CAYNNNNRTG	6 cut(s)	381, 822, 1125, 1556, 1742, 1970
SmlI	CTYRAG	5 cut(s)	507, 788, 1091, 1282, 1613
SmoI	CTYRAG	5 cut(s)	507, 788, 1091, 1282, 1613
SphI	GCATGC	2 cut(s)	212, 2193
SseBI	AGGCCT	1 cut(s)	2004
SsiI	CCGC	5 cut(s)	142, 304, 774, 894, 1578
SspI	AATATT	2 cut(s)	1830, 2290
SspMI	CTAG	6 cut(s)	459, 762, 1046, 1676, 1697, 2462
StuI	AGGCCT	1 cut(s)	2004
StyD4I	CCNGG	4 cut(s)	213, 996, 2059, 2094
StyI	CCWWGG	1 cut(s)	1423
TaaI	ACNGT	9 cut(s)	290, 312, 711, 844, 1451, 1635, 1722, 1757, 2468
TaiI	ACGT	2 cut(s)	738, 1461
TaqI	TCGA	3 cut(s)	573, 1530, 2055
TatI	WGTACW	1 cut(s)	868
TfiI	GAWTC	7 cut(s)	1053, 1199, 1229, 1835, 2033, 2052, 2473
Tru1I	TTAA	6 cut(s)	629, 864, 993, 1008, 1140, 1740
Tru9I	TTAA	6 cut(s)	629, 864, 993, 1008, 1140, 1740
TscAI	CASTG	5 cut(s)	21, 736, 1477, 1762, 2191
TseFI	GTSAC	3 cut(s)	96, 1432, 1768
TseI	GCWGC	6 cut(s)	1388, 1670, 1685, 2198, 2228, 2414
Tsp45I	GTSAC	3 cut(s)	96, 1432, 1768
TspDTI	ATGAA	8 cut(s)	784, 942, 1167, 1671, 1952, 2153, 2393, 2498
TspRI	CASTG	5 cut(s)	21, 736, 1477, 1762, 2191
Tth111I	GACNNNGTC	1 cut(s)	30
Van91I	CCANNNNNTGG	3 cut(s)	1429, 1594, 1845
VneI	GTGCAC	1 cut(s)	1118
VpaK11BI	GGWCC	3 cut(s)	348, 943, 957
XapI	RAATTY	5 cut(s)	424, 1658, 1842, 1867, 2129
XbaI	TCTAGA	1 cut(s)	2461
XceI	RCATGY	3 cut(s)	212, 780, 2193
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2166
XmiI	GTMKAC	2 cut(s)	368, 449
XmnI	GAANNNNTTC	1 cut(s)	710
XspI	CTAG	6 cut(s)	459, 762, 1046, 1676, 1697, 2462
Zsp2I	ATGCAT	2 cut(s)	210, 2299

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.