Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0007239

Physical Location & Seq

Genomic Coordinates Forward (+)

28859986 .. 28862825

Gene Structure 2840 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ48957

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2382 bp

ATGAGAAACTCTGCACTTCACCTAAGACATTATCACAAGTCCATCAGTTCCAAGCAACAATTCCTCAACTTCTCCTCATTACCATCCCCTGTTCTCGAATCACAAAACCCATGTCTTCGAATCCAAACCCGCAGGCTTGCATTAGTCCATCTCTTACAACTAGGCGTTTCAGACAAACCCATTTTGTTCTTCAAGAGAATCCATGCTCAGATTCTTACATCGGGCTTTCAAGAAGATGTTTTCCTTGCCAATCTTCTACTGGACTCGTACAAGAAATCCGGGTCTATTTTTTATGCACGGAAGCTGTTTGATAGAATGCCTGAGAGGAACTCCGTTACTTGGTCTTCTATGGTTTCTATGTATACCAAGCATGGGAAGAGCGATGAAGCACTGAAGGTGTTTTCGGAGTTCCATAGGAGTTCTGATGGGAGACCGAATGAGTATACCTTGCCTAGTGTTATTCGGGCTTGTACGCAGTTTGGAGGGGTTGATCAAGGTGCCCAAGTGCATTGTTTTGTCGTTAAGACTGGTTTTGATCTGGAAGTCTTTGTGGGTACTTCTTTAATTGATTTTTATGTAAAAATGGGTGATATAGAAGAGGCGAGATTGATTTTTGATGGTTTAAAAGTTAAGAGTGCGGTTACTTGGACTATTGTTATAGCAGGGTATGCGAAAAGTGGAAGAAGTGAAGCGGCTTTGAAGTTGTTTTATCATATGAAAGACACTGATGTTCTTCCCGATAAATATGTGCTCTCTGCTCTTCTGACCGCATGTTCTGGCATCAAGTTCATTGGAGGCGGCAAGCAAATTCATGCTTATGTGCTGAGAAGGGGAACAGAAATGGATGTTTCGGTGGTTAATGTACTAATAGATTTCTACACAAAGTGCGGTCAAGTCCAGGCAGGACATAAACTATTTGATAAGATGGTAGATAAGGACCTTATTTCATGGACCACAATGATAGCAGGGTACATGCAAAACTCGATGCACATGGAGGCCGTTAAGCTATTTTCTGAAATGACCAGATTGGGTTGGAAGGCAGATGGATATGGATGCAGTAGCATTCTTACTTCATGTGGTTCACTTGAGGCTCTGAAACATGGGAGAGAAGTGCACGCTTATACTATCAGGGTTGATCTTGTCTACGAATATTATGTGAAGAATAGTTTGATTGATATGTATGCAAAATGTGATTCCCTGACTGACGCAAGAAGAGTTTTTGATTCCATGACTGATCATAATGTGGTCTCTTACAATGCAATGATTGAAGGATACTCAAGGCAGGATAAGGTGGCTGAAGCTCTGGATCTTTTCAATCTTATGAGGCTTAAATTGGTCCAGCCTAGTATCTTGACATTTGTCAGTCTTCTTGGTGTCTCAGCTGCTTTATTGACCTTGGAATTAAGCAAGCAAATCCATGGGCTGACCACCAAGTACGGGTTATCTTTGGATATATTTGCTGGCAGTGCTCTCATTGATGTTTATTCCAAGTGTTCATGTATTCGCGAAGCTAAACTTGTATTCGAGGAGATGAATGAAAAAGATATAGTTGTGTGGAATTCAATGTTCTGTGGATACGCCCAACAGCTGGAAAGTGAAGAGGCTCTTAAGTTGTACTCAGAACTACAATTATCAAGACAAAATCCTAATGAGTTTACTTTTGCTTCCCTAATCTCAGCAGCCAGCAACCTAGCAAGTATCCAACATGGTCAACAGTTCCATAGCCAGATCTTTAAAATTGGTCTTGAGAATGATCCCTTTGTCACAAATGCCCTTGTGGATATGTATTCCAAGTGTGGAAGCATTACAGAGGCTCGCAAAATATTTGATTCCAAAACTTTGAAAGATGTTGCCTGTTGGAATTCCATTATCTCAACGTATGCACATCATGGAGAAGCAGAAAAAGCTCTTCTGATGTTTGAAAAAATGATGAATGAGGGGATAAAACCCAACTATATCACCTTTGTGGGGGTGCTATCAGCTTGTAGCCATGCAGGCCTTGTGGAAGATGGACTTGGTCACTTTGAATCAATGCCTTGGTTTGGAATCGAACCAGGGATGGAACATTATTCTTGCATAGTTTCTCTCTTGGGCCGCGCCGGTAAATTATCTGAAGCTAAGGAATTTATTGAGAAAATGCCAATGAAACCACCAGCAATGATATGGAGGAGTTTACTCGGTTCATGTACAGCTGCAGGTAATGTTGAATTGGGGATCTATGCAGCAGAGATGGCAATTTTGAGTGATCCAATGGATAGTGGATCGTATATCTTACTTTCAAATATGTATGCATCCGAAGGTATGTGGGATGATGTCAAGAGAGTGAGGAAAAAAATGGAGTATAATGGTGTAGTGAAAGAAACCGGACGTAGTTGGTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

793

Amino Acids

88.94

Weight (kDa)

6.91

Isoelectric Point (pI)

43.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	109 - 157	1.6e-06	PPR repeat family
PPR	PF01535	112 - 139	2.5e-06	PPR repeat
PPR_2	PF13041	212 - 258	4.7e-10	PPR repeat family
PPR	PF01535	214 - 241	1.7e-06	PPR repeat
PPR_2	PF13041	313 - 359	6.1e-08	PPR repeat family
PPR	PF01535	315 - 344	8.9e-07	PPR repeat
PPR_2	PF13041	414 - 457	4.1e-11	PPR repeat family
PPR	PF01535	416 - 442	1.7e-06	PPR repeat
PPR_2	PF13041	514 - 560	3.3e-09	PPR repeat family
PPR_2	PF13041	615 - 663	3.1e-10	PPR repeat family
PPR	PF01535	619 - 648	5.8e-06	PPR repeat
E_motif	PF20431	734 - 792	3.6e-14	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0007239)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G39530
fragaria_vesca	FvH4_1g22400 FvH4_1g22550
malus_domestica	MD01G1019600.v1.1
prunus_persica	Prupe.6G172600_v2.0.a1
pyrus_communis	pycom01g04910
rosa_chinensis	RchiOBHm_Chr2g0116541
rosa_laevigata	RLG00000018286
rosa_multiflora	Rmu_sc0001287.1_g000020 Rmu_sc0001287.1_g000021 Rmu_sc0003255.1_g000001 Rmu_sc0003255.1_g000019 Rmu_sc0004191.1_g000031
rosa_roxburghii	Rroxscaffold_2G00127080 Rroxscaffold_2G00127100
rosa_rugosa	Rorug02G0207400 Rorug02G0207500
rosa_samantha	Rh2AG262400 Rh2BG273600 Rh2BG273900 Rh2BG274000 Rh2DG265300 Rh2DG270600 Rh2DG289100
rosa_wichuraiana	Rw2G020660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2186
AccB1I	GGYRCC	1 cut(s)	497
AccB7I	CCANNNNNTGG	1 cut(s)	1588
AccI	GTMKAC	3 cut(s)	362, 443, 1143
AccII	CGCG	2 cut(s)	1506, 2097
AciI	CCGC	7 cut(s)	130, 638, 692, 768, 798, 888, 2095
AclWI	GGATC	5 cut(s)	1314, 1748, 2222, 2240, 2269
AcsI	RAATTY	4 cut(s)	807, 1558, 1861, 2123
AcuI	CTGAAG	3 cut(s)	413, 1317, 2133
AdeI	CACNNNGTG	1 cut(s)	885
AfaI	GTAC	8 cut(s)	269, 472, 556, 864, 971, 1436, 1616, 2188
AfiI	CCNNNNNNNGG	6 cut(s)	339, 372, 1437, 1588, 1968, 2042
AflII	CTTAAG	1 cut(s)	1607
AjnI	CCWGG	2 cut(s)	897, 2053
AjuI	GAANNNNNNNTTGG	4 cut(s)	44, 76, 1998, 2030
AleI	CACNNNNGTG	1 cut(s)	1964
Alw21I	GWGCWC	3 cut(s)	753, 1116, 1471
Alw26I	GTCTC	3 cut(s)	424, 1252, 1381
Alw44I	GTGCAC	1 cut(s)	1112
AlwI	GGATC	5 cut(s)	1314, 1748, 2222, 2240, 2269
AoxI	GGCC	3 cut(s)	996, 1996, 2092
ApaLI	GTGCAC	1 cut(s)	1112
ApeKI	GCWGC	4 cut(s)	1382, 1679, 2192, 2222
ApoI	RAATTY	4 cut(s)	807, 1558, 1861, 2123
ArsI	GACNNNNNNTTYG	2 cut(s)	97, 129
AspLEI	GCGC	1 cut(s)	2099
AspS9I	GGNCC	4 cut(s)	937, 951, 1336, 2092
AsuC2I	CCSGG	1 cut(s)	280
AsuHPI	GGTGA	3 cut(s)	11, 599, 1951
AsuII	TTCGAA	1 cut(s)	118
AvaII	GGWCC	3 cut(s)	937, 951, 1336
BaeGI	GKGCMC	2 cut(s)	502, 1116
BanI	GGYRCC	1 cut(s)	497
BbsI	GAAGAC	3 cut(s)	107, 336, 1358
Bbv12I	GWGCWC	3 cut(s)	753, 1116, 1471
BbvI	GCAGC	4 cut(s)	1369, 1691, 2179, 2234
BceAI	ACGGC	1 cut(s)	983
BciT130I	CCWGG	2 cut(s)	899, 2055
BciVI	GTATCC	3 cut(s)	1265, 1568, 1709
BclI	TGATCA	2 cut(s)	490, 1234
BcnI	CCSGG	1 cut(s)	280
BcoDI	GTCTC	3 cut(s)	424, 1252, 1381
BfaI	CTAG	4 cut(s)	161, 453, 1344, 1691
BfmI	CTRYAG	1 cut(s)	2193
BfrI	CTTAAG	1 cut(s)	1607
BfuAI	ACCTGC	1 cut(s)	2186
BfuI	GTATCC	3 cut(s)	1265, 1568, 1709
BglI	GCCNNNNNGGC	1 cut(s)	1995
BglII	AGATCT	1 cut(s)	1728
BisI	GCNGC	7 cut(s)	693, 799, 1383, 1680, 2095, 2193, 2223
BlsI	GCNGC	7 cut(s)	694, 800, 1384, 1681, 2096, 2194, 2224
Bme1390I	CCNGG	3 cut(s)	280, 899, 2055
Bme18I	GGWCC	3 cut(s)	937, 951, 1336
BmgT120I	GGNCC	4 cut(s)	937, 951, 1336, 2092
BmiI	GGNNCC	1 cut(s)	499
BmrFI	CCNGG	3 cut(s)	280, 899, 2055
BmsI	GCATC	4 cut(s)	789, 975, 1043, 2300
BoxI	GACNNNNGTC	1 cut(s)	1358
BpiI	GAAGAC	3 cut(s)	107, 336, 1358
BplI	GAGNNNNNCTC	2 cut(s)	314, 346
Bpu10I	CCTNAGC	1 cut(s)	2118
Bpu14I	TTCGAA	1 cut(s)	118
BpuEI	CTTGAG	3 cut(s)	1106, 1261, 1766
BpuMI	CCSGG	1 cut(s)	280
BsaI	GGTCTC	2 cut(s)	424, 1252
BsaJI	CCNNGG	4 cut(s)	1395, 1417, 2036, 2054
BsaWI	WCCGGW	1 cut(s)	2363
Bsc4I	CCNNNNNNNGG	6 cut(s)	339, 372, 1437, 1588, 1968, 2042
Bse118I	RCCGGY	1 cut(s)	2099
Bse1I	ACTGG	2 cut(s)	264, 532
Bse3DI	GCAATG	2 cut(s)	1266, 2163
BseBI	CCWGG	2 cut(s)	899, 2055
BseDI	CCNNGG	4 cut(s)	1395, 1417, 2036, 2054
BseGI	GGATG	6 cut(s)	83, 850, 1058, 2064, 2291, 2314
BseLI	CCNNNNNNNGG	6 cut(s)	339, 372, 1437, 1588, 1968, 2042
BseMI	GCAATG	2 cut(s)	1266, 2163
BseMII	CTCAG	6 cut(s)	221, 312, 815, 1392, 1632, 1689
BseNI	ACTGG	2 cut(s)	264, 532
BseRI	GAGGAG	3 cut(s)	64, 1541, 2182
BseSI	GKGCMC	2 cut(s)	502, 1116
BseXI	GCAGC	4 cut(s)	1369, 1691, 2179, 2234
Bsh1236I	CGCG	2 cut(s)	1506, 2097
BshFI	GGCC	3 cut(s)	998, 1998, 2094
BshNI	GGYRCC	1 cut(s)	497
BsiHKAI	GWGCWC	3 cut(s)	753, 1116, 1471
BsiSI	CCGG	3 cut(s)	279, 2100, 2364
BslI	CCNNNNNNNGG	6 cut(s)	339, 372, 1437, 1588, 1968, 2042
BsmAI	GTCTC	3 cut(s)	424, 1252, 1381
BsmI	GAATGC	2 cut(s)	321, 1062
BsnI	GGCC	3 cut(s)	998, 1998, 2094
Bso31I	GGTCTC	2 cut(s)	424, 1252
Bsp119I	TTCGAA	1 cut(s)	118
Bsp1286I	GDGCHC	4 cut(s)	502, 753, 1116, 1471
Bsp1407I	TGTACA	1 cut(s)	2186
Bsp19I	CCATGG	1 cut(s)	1417
Bsp68I	TCGCGA	1 cut(s)	1506
BspACI	CCGC	7 cut(s)	130, 638, 692, 768, 798, 888, 2095
BspANI	GGCC	3 cut(s)	998, 1998, 2094
BspCNI	CTCAG	6 cut(s)	220, 313, 816, 1391, 1631, 1688
BspFNI	CGCG	2 cut(s)	1506, 2097
BspLI	GGNNCC	1 cut(s)	499
BspMAI	CTGCAG	1 cut(s)	2197
BspMI	ACCTGC	1 cut(s)	2186
BspPI	GGATC	5 cut(s)	1314, 1748, 2222, 2240, 2269
BspQI	GCTCTTC	3 cut(s)	371, 765, 1914
BspT104I	TTCGAA	1 cut(s)	118
BspT107I	GGYRCC	1 cut(s)	497
BspTI	CTTAAG	1 cut(s)	1607
BspTNI	GGTCTC	2 cut(s)	424, 1252
BsrDI	GCAATG	2 cut(s)	1266, 2163
BsrFI	RCCGGY	1 cut(s)	2099
BsrGI	TGTACA	1 cut(s)	2186
BsrI	ACTGG	2 cut(s)	264, 532
BssAI	RCCGGY	1 cut(s)	2099
BssECI	CCNNGG	4 cut(s)	1395, 1417, 2036, 2054
BssNAI	GTATAC	2 cut(s)	363, 444
BssT1I	CCWWGG	3 cut(s)	1395, 1417, 2036
Bst1107I	GTATAC	2 cut(s)	363, 444
Bst2UI	CCWGG	2 cut(s)	899, 2055
Bst4CI	ACNGT	1 cut(s)	1716
Bst6I	CTCTTC	6 cut(s)	371, 591, 765, 1207, 1593, 1914
BstAFI	CTTAAG	1 cut(s)	1607
BstAPI	GCANNNNNTGC	1 cut(s)	668
BstAUI	TGTACA	1 cut(s)	2186
BstBI	TTCGAA	1 cut(s)	118
BstC8I	GCNNGC	9 cut(s)	134, 138, 803, 1116, 1409, 1462, 1684, 1816, 1996
BstDEI	CTNAG	8 cut(s)	23, 207, 321, 824, 1378, 1618, 1675, 2118
BstDSI	CCRYGG	1 cut(s)	1417
BstF5I	GGATG	6 cut(s)	83, 850, 1058, 2064, 2291, 2314
BstFNI	CGCG	2 cut(s)	1506, 2097
BstHHI	GCGC	1 cut(s)	2099
BstMAI	GTCTC	3 cut(s)	424, 1252, 1381
BstMWI	GCNNNNNNNGC	5 cut(s)	668, 1466, 1904, 1995, 2231
BstNI	CCWGG	2 cut(s)	899, 2055
BstNSI	RCATGY	2 cut(s)	774, 976
BstPAI	GACNNNNGTC	1 cut(s)	1358
BstSCI	CCNGG	3 cut(s)	278, 897, 2053
BstSFI	CTRYAG	1 cut(s)	2193
BstSLI	GKGCMC	2 cut(s)	502, 1116
BstUI	CGCG	2 cut(s)	1506, 2097
BstV1I	GCAGC	4 cut(s)	1369, 1691, 2179, 2234
BstV2I	GAAGAC	3 cut(s)	107, 336, 1358
BstX2I	RGATCY	3 cut(s)	1306, 1728, 2214
BstYI	RGATCY	3 cut(s)	1306, 1728, 2214
BstZ17I	GTATAC	2 cut(s)	363, 444
BsuI	GTATCC	3 cut(s)	1265, 1568, 1709
BsuRI	GGCC	3 cut(s)	998, 1998, 2094
BtgI	CCRYGG	1 cut(s)	1417
BtgZI	GCGATG	1 cut(s)	396
BtsCI	GGATG	6 cut(s)	83, 850, 1058, 2064, 2291, 2314
BtsI	GCAGTG	1 cut(s)	1471
BtsIMutI	CAGTG	3 cut(s)	389, 723, 1471
BtuMI	TCGCGA	1 cut(s)	1506
BveI	ACCTGC	1 cut(s)	2186
Cac8I	GCNNGC	9 cut(s)	134, 138, 803, 1116, 1409, 1462, 1684, 1816, 1996
CfoI	GCGC	1 cut(s)	2099
Cfr10I	RCCGGY	1 cut(s)	2099
Cfr13I	GGNCC	4 cut(s)	937, 951, 1336, 2092
CseI	GACGC	1 cut(s)	1214
Csp6I	GTAC	8 cut(s)	268, 471, 555, 863, 970, 1435, 1615, 2187
CviQI	GTAC	8 cut(s)	268, 471, 555, 863, 970, 1435, 1615, 2187
DdeI	CTNAG	8 cut(s)	23, 207, 321, 824, 1378, 1618, 1675, 2118
DraI	TTTAAA	2 cut(s)	624, 1735
DraIII	CACNNNGTG	1 cut(s)	885
Eam1104I	CTCTTC	6 cut(s)	371, 591, 765, 1207, 1593, 1914
EarI	CTCTTC	6 cut(s)	371, 591, 765, 1207, 1593, 1914
Eco130I	CCWWGG	3 cut(s)	1395, 1417, 2036
Eco147I	AGGCCT	1 cut(s)	1998
Eco31I	GGTCTC	2 cut(s)	424, 1252
Eco47I	GGWCC	3 cut(s)	937, 951, 1336
Eco57I	CTGAAG	3 cut(s)	413, 1317, 2133
EcoO109I	RGGNCCY	1 cut(s)	937
EcoRI	GAATTC	2 cut(s)	1558, 1861
EcoRII	CCWGG	2 cut(s)	897, 2053
EcoT14I	CCWWGG	3 cut(s)	1395, 1417, 2036
EcoT22I	ATGCAT	1 cut(s)	2293
ErhI	CCWWGG	3 cut(s)	1395, 1417, 2036
FalI	AAGNNNNNCTT	6 cut(s)	1500, 1532, 1590, 1622, 1998, 2030
FauI	CCCGC	1 cut(s)	137
FauNDI	CATATG	1 cut(s)	714
FbaI	TGATCA	2 cut(s)	490, 1234
FblI	GTMKAC	3 cut(s)	362, 443, 1143
Fnu4HI	GCNGC	7 cut(s)	693, 799, 1383, 1680, 2095, 2193, 2223
FokI	GGATG	6 cut(s)	70, 857, 1065, 2071, 2278, 2321
Fsp4HI	GCNGC	7 cut(s)	693, 799, 1383, 1680, 2095, 2193, 2223
FspBI	CTAG	4 cut(s)	161, 453, 1344, 1691
GlaI	GCGC	1 cut(s)	2098
GluI	GCNGC	7 cut(s)	693, 799, 1383, 1680, 2095, 2193, 2223
HaeIII	GGCC	3 cut(s)	998, 1998, 2094
HapII	CCGG	3 cut(s)	279, 2100, 2364
HgaI	GACGC	1 cut(s)	1214
HhaI	GCGC	1 cut(s)	2099
Hin6I	GCGC	1 cut(s)	2097
HinP1I	GCGC	1 cut(s)	2097
HincII	GTYRAC	1 cut(s)	1712
HindII	GTYRAC	1 cut(s)	1712
HpaII	CCGG	3 cut(s)	279, 2100, 2364
HphI	GGTGA	3 cut(s)	11, 599, 1951
Hpy166II	GTNNAC	8 cut(s)	363, 444, 1082, 1114, 1144, 1656, 1712, 2174
Hpy8I	GTNNAC	8 cut(s)	363, 444, 1082, 1114, 1144, 1656, 1712, 2174
HpyAV	CCTTC	5 cut(s)	388, 822, 1030, 1262, 2291
HpyCH4III	ACNGT	1 cut(s)	1716
HpyCH4IV	ACGT	2 cut(s)	1877, 2368
HpyF10VI	GCNNNNNNNGC	5 cut(s)	668, 1466, 1904, 1995, 2231
HpyF3I	CTNAG	8 cut(s)	23, 207, 321, 824, 1378, 1618, 1675, 2118
HpySE526I	ACGT	2 cut(s)	1877, 2368
HspAI	GCGC	1 cut(s)	2097
Ksp22I	TGATCA	2 cut(s)	490, 1234
LguI	GCTCTTC	3 cut(s)	371, 765, 1914
Lsp1109I	GCAGC	4 cut(s)	1369, 1691, 2179, 2234
LweI	GCATC	4 cut(s)	789, 975, 1043, 2300
MaeI	CTAG	4 cut(s)	161, 453, 1344, 1691
MaeII	ACGT	2 cut(s)	1877, 2368
MaeIII	GTNAC	4 cut(s)	334, 640, 1762, 2018
MflI	RGATCY	3 cut(s)	1306, 1728, 2214
MhlI	GDGCHC	4 cut(s)	502, 753, 1116, 1471
MlyI	GAGTC	1 cut(s)	257
MmeI	TCCRAC	3 cut(s)	1013, 1726, 1838
Mph1103I	ATGCAT	1 cut(s)	2293
MslI	CAYNNNNRTG	2 cut(s)	816, 1964
MspA1I	CMGCKG	3 cut(s)	1382, 1588, 2192
MspCI	CTTAAG	1 cut(s)	1607
MspI	CCGG	3 cut(s)	279, 2100, 2364
MspR9I	CCNGG	3 cut(s)	280, 899, 2055
Mva1269I	GAATGC	2 cut(s)	321, 1062
MvaI	CCWGG	2 cut(s)	899, 2055
MvnI	CGCG	2 cut(s)	1506, 2097
MwoI	GCNNNNNNNGC	5 cut(s)	668, 1466, 1904, 1995, 2231
NciI	CCSGG	1 cut(s)	280
NcoI	CCATGG	1 cut(s)	1417
NdeI	CATATG	1 cut(s)	714
NlaIV	GGNNCC	1 cut(s)	499
NmuCI	GTSAC	2 cut(s)	1762, 2018
NruI	TCGCGA	1 cut(s)	1506
NsiI	ATGCAT	1 cut(s)	2293
NspI	RCATGY	2 cut(s)	774, 976
NspV	TTCGAA	1 cut(s)	118
OliI	CACNNNNGTG	1 cut(s)	1964
PceI	AGGCCT	1 cut(s)	1998
PciSI	GCTCTTC	3 cut(s)	371, 765, 1914
PctI	GAATGC	2 cut(s)	321, 1062
PfeI	GAWTC	9 cut(s)	98, 120, 198, 211, 1193, 1223, 1829, 2027, 2046
PflFI	GACNNNGTC	1 cut(s)	2016
PflMI	CCANNNNNTGG	1 cut(s)	1588
PkrI	GCNGC	7 cut(s)	694, 800, 1384, 1681, 2096, 2194, 2224
PleI	GAGTC	1 cut(s)	257
PpsI	GAGTC	1 cut(s)	257
PpuMI	RGGWCCY	1 cut(s)	937
PshAI	GACNNNNGTC	1 cut(s)	1358
Psp5II	RGGWCCY	1 cut(s)	937
Psp6I	CCWGG	2 cut(s)	897, 2053
PspGI	CCWGG	2 cut(s)	897, 2053
PspN4I	GGNNCC	1 cut(s)	499
PspPI	GGNCC	4 cut(s)	937, 951, 1336, 2092
PspPPI	RGGWCCY	1 cut(s)	937
PstI	CTGCAG	1 cut(s)	2197
PsuI	RGATCY	3 cut(s)	1306, 1728, 2214
PsyI	GACNNNGTC	1 cut(s)	2016
PvuII	CAGCTG	3 cut(s)	1382, 1588, 2192
RruI	TCGCGA	1 cut(s)	1506
RsaI	GTAC	8 cut(s)	269, 472, 556, 864, 971, 1436, 1616, 2188
RsaNI	GTAC	8 cut(s)	268, 471, 555, 863, 970, 1435, 1615, 2187
RseI	CAYNNNNRTG	2 cut(s)	816, 1964
SapI	GCTCTTC	3 cut(s)	371, 765, 1914
SatI	GCNGC	7 cut(s)	693, 799, 1383, 1680, 2095, 2193, 2223
Sau96I	GGNCC	4 cut(s)	937, 951, 1336, 2092
SchI	GAGTC	1 cut(s)	257
ScrFI	CCNGG	3 cut(s)	280, 899, 2055
SduI	GDGCHC	4 cut(s)	502, 753, 1116, 1471
SfaNI	GCATC	4 cut(s)	789, 975, 1043, 2300
SfcI	CTRYAG	1 cut(s)	2193
SfuI	TTCGAA	1 cut(s)	118
SinI	GGWCC	3 cut(s)	937, 951, 1336
SmiMI	CAYNNNNRTG	2 cut(s)	816, 1964
SmlI	CTYRAG	4 cut(s)	1085, 1276, 1607, 1745
SmoI	CTYRAG	4 cut(s)	1085, 1276, 1607, 1745
SseBI	AGGCCT	1 cut(s)	1998
SsiI	CCGC	7 cut(s)	130, 638, 692, 768, 798, 888, 2095
SspI	AATATT	2 cut(s)	1151, 1824
SspMI	CTAG	4 cut(s)	161, 453, 1344, 1691
StuI	AGGCCT	1 cut(s)	1998
StyD4I	CCNGG	3 cut(s)	278, 897, 2053
StyI	CCWWGG	3 cut(s)	1395, 1417, 2036
TaaI	ACNGT	1 cut(s)	1716
TaiI	ACGT	2 cut(s)	1880, 2371
TaqI	TCGA	5 cut(s)	96, 118, 983, 1524, 2049
TaqII	GACCGA	1 cut(s)	448
TatI	WGTACW	3 cut(s)	862, 1614, 2186
TauI	GCSGC	3 cut(s)	695, 801, 2097
TfiI	GAWTC	9 cut(s)	98, 120, 198, 211, 1193, 1223, 1829, 2027, 2046
TscAI	CASTG	3 cut(s)	396, 730, 1471
TseFI	GTSAC	2 cut(s)	1762, 2018
TseI	GCWGC	4 cut(s)	1382, 1679, 2192, 2222
Tsp45I	GTSAC	2 cut(s)	1762, 2018
TspGWI	ACGGA	2 cut(s)	313, 322
TspRI	CASTG	3 cut(s)	396, 730, 1471
Tth111I	GACNNNGTC	1 cut(s)	2016
Van91I	CCANNNNNTGG	1 cut(s)	1588
Vha464I	CTTAAG	1 cut(s)	1607
VneI	GTGCAC	1 cut(s)	1112
VpaK11BI	GGWCC	3 cut(s)	937, 951, 1336
XapI	RAATTY	4 cut(s)	807, 1558, 1861, 2123
XceI	RCATGY	2 cut(s)	774, 976
XcmI	CCANNNNNNNNNTGG	2 cut(s)	256, 2160
XmiI	GTMKAC	3 cut(s)	362, 443, 1143
XspI	CTAG	4 cut(s)	161, 453, 1344, 1691
Zsp2I	ATGCAT	1 cut(s)	2293

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.