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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g19230 FvH4_2g00620 FvH4_2g11351 FvH4_2g13181 FvH4_4g24831 FvH4_5g16981 FvH4_5g22602 FvH4_6g18441 |
| rosa_chinensis | RchiOBHm_Chr5g0038221 RchiOBHm_Chr5g0046921 |
| rosa_laevigata | RLG00000003478 RLG00000004319 RLG00000007966 RLG00000009874 RLG00000028742 |
| rosa_multiflora | Rmu_sc0002356.1_g000009 Rmu_ssc0000245.1_g000015 |
| rosa_roxburghii | Rroxscaffold_171G00441510 Rroxscaffold_1G00056130 Rroxscaffold_2G00113560 |
| rosa_rugosa | Rorug06G0488700 |
| rosa_samantha | Rh5DG137500 Rh6BG137500 Rh6CG135400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1552 |
| AccII | CGCG | 1 cut(s) | 1497 |
| AcoI | YGGCCR | 3 cut(s) | 716, 738, 1492 |
| AcsI | RAATTY | 1 cut(s) | 178 |
| AcuI | CTGAAG | 1 cut(s) | 965 |
| AfaI | GTAC | 2 cut(s) | 1261, 1435 |
| AflIII | ACRYGT | 1 cut(s) | 59 |
| AgeI | ACCGGT | 1 cut(s) | 274 |
| AgsI | TTSAA | 6 cut(s) | 135, 331, 409, 748, 855, 1519 |
| AjnI | CCWGG | 4 cut(s) | 492, 533, 1271, 1420 |
| AluBI | AGCT | 4 cut(s) | 502, 949, 1132, 1451 |
| AluI | AGCT | 4 cut(s) | 502, 949, 1132, 1451 |
| Alw21I | GWGCWC | 2 cut(s) | 166, 608 |
| Alw26I | GTCTC | 1 cut(s) | 1343 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1576 |
| Ama87I | CYCGRG | 1 cut(s) | 881 |
| ApeKI | GCWGC | 3 cut(s) | 363, 860, 1111 |
| ApoI | RAATTY | 1 cut(s) | 178 |
| AsiGI | ACCGGT | 1 cut(s) | 274 |
| AspA2I | CCTAGG | 3 cut(s) | 395, 476, 1535 |
| AspLEI | GCGC | 1 cut(s) | 1499 |
| AspS9I | GGNCC | 8 cut(s) | 152, 531, 575, 670, 1003, 1332, 1418, 1543 |
| AsuC2I | CCSGG | 3 cut(s) | 422, 530, 1527 |
| AsuHPI | GGTGA | 3 cut(s) | 472, 826, 1058 |
| AsuII | TTCGAA | 1 cut(s) | 1026 |
| AvaI | CYCGRG | 1 cut(s) | 881 |
| AvaII | GGWCC | 2 cut(s) | 670, 1332 |
| AvrII | CCTAGG | 3 cut(s) | 395, 476, 1535 |
| BamHI | GGATCC | 5 cut(s) | 472, 489, 525, 556, 1168 |
| BanII | GRGCYC | 1 cut(s) | 1428 |
| Bbv12I | GWGCWC | 2 cut(s) | 166, 608 |
| BbvI | GCAGC | 3 cut(s) | 375, 847, 1123 |
| BccI | CCATC | 7 cut(s) | 252, 280, 344, 718, 1203, 1228, 1534 |
| BceAI | ACGGC | 3 cut(s) | 416, 731, 873 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 27, 61 |
| BciT130I | CCWGG | 4 cut(s) | 494, 535, 1273, 1422 |
| BcnI | CCSGG | 3 cut(s) | 422, 530, 1527 |
| BcoDI | GTCTC | 1 cut(s) | 1343 |
| BfaI | CTAG | 3 cut(s) | 396, 477, 1536 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 715 |
| BglII | AGATCT | 2 cut(s) | 191, 1247 |
| BisI | GCNGC | 7 cut(s) | 361, 364, 784, 861, 1112, 1376, 1495 |
| BlnI | CCTAGG | 3 cut(s) | 395, 476, 1535 |
| BlpI | GCTNAGC | 1 cut(s) | 498 |
| BlsI | GCNGC | 7 cut(s) | 362, 365, 785, 862, 1113, 1377, 1496 |
| Bme1390I | CCNGG | 7 cut(s) | 422, 494, 530, 535, 1273, 1422, 1527 |
| Bme18I | GGWCC | 2 cut(s) | 670, 1332 |
| BmeT110I | CYCGRG | 1 cut(s) | 881 |
| BmgT120I | GGNCC | 8 cut(s) | 152, 531, 575, 670, 1003, 1332, 1418, 1543 |
| BmiI | GGNNCC | 8 cut(s) | 393, 474, 491, 527, 558, 672, 1091, 1170 |
| BmrFI | CCNGG | 7 cut(s) | 422, 494, 530, 535, 1273, 1422, 1527 |
| BmrI | ACTGGG | 1 cut(s) | 1576 |
| BmsI | GCATC | 4 cut(s) | 770, 901, 1213, 1349 |
| BmuI | ACTGGG | 1 cut(s) | 1576 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 153, 185 |
| BpmI | CTGGAG | 1 cut(s) | 1279 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 498 |
| Bpu14I | TTCGAA | 1 cut(s) | 1026 |
| BpuMI | CCSGG | 3 cut(s) | 422, 530, 1527 |
| BsaBI | GATNNNNATC | 3 cut(s) | 524, 795, 1061 |
| BsaWI | WCCGGW | 1 cut(s) | 274 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 215, 245 |
| Bse118I | RCCGGY | 5 cut(s) | 199, 274, 740, 1000, 1483 |
| Bse1I | ACTGG | 3 cut(s) | 314, 622, 1582 |
| Bse3DI | GCAATG | 1 cut(s) | 793 |
| Bse8I | GATNNNNATC | 3 cut(s) | 524, 795, 1061 |
| BseBI | CCWGG | 4 cut(s) | 494, 535, 1273, 1422 |
| BseGI | GGATG | 3 cut(s) | 1239, 1311, 1545 |
| BseJI | GATNNNNATC | 3 cut(s) | 524, 795, 1061 |
| BseMI | GCAATG | 1 cut(s) | 793 |
| BseMII | CTCAG | 1 cut(s) | 512 |
| BseNI | ACTGG | 3 cut(s) | 314, 622, 1582 |
| BseRI | GAGGAG | 1 cut(s) | 60 |
| BseXI | GCAGC | 3 cut(s) | 375, 847, 1123 |
| BseYI | CCCAGC | 1 cut(s) | 511 |
| BsgI | GTGCAG | 2 cut(s) | 180, 399 |
| Bsh1236I | CGCG | 1 cut(s) | 1497 |
| Bsh1285I | CGRYCG | 1 cut(s) | 275 |
| BshTI | ACCGGT | 1 cut(s) | 274 |
| BsiEI | CGRYCG | 1 cut(s) | 275 |
| BsiHKAI | GWGCWC | 2 cut(s) | 166, 608 |
| BsiHKCI | CYCGRG | 1 cut(s) | 881 |
| BsiSI | CCGG | 8 cut(s) | 200, 275, 421, 529, 741, 1001, 1484, 1526 |
| BslFI | GGGAC | 2 cut(s) | 320, 1564 |
| BsmAI | GTCTC | 1 cut(s) | 1343 |
| BsmBI | CGTCTC | 1 cut(s) | 1343 |
| BsmFI | GGGAC | 2 cut(s) | 320, 1564 |
| BsoBI | CYCGRG | 1 cut(s) | 881 |
| Bsp119I | TTCGAA | 1 cut(s) | 1026 |
| Bsp1286I | GDGCHC | 3 cut(s) | 166, 608, 1428 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 498 |
| BspCNI | CTCAG | 1 cut(s) | 511 |
| BspFNI | CGCG | 1 cut(s) | 1497 |
| BspLI | GGNNCC | 8 cut(s) | 393, 474, 491, 527, 558, 672, 1091, 1170 |
| BspT104I | TTCGAA | 1 cut(s) | 1026 |
| BsrDI | GCAATG | 1 cut(s) | 793 |
| BsrFI | RCCGGY | 5 cut(s) | 199, 274, 740, 1000, 1483 |
| BsrI | ACTGG | 3 cut(s) | 314, 622, 1582 |
| BssAI | RCCGGY | 5 cut(s) | 199, 274, 740, 1000, 1483 |
| BssT1I | CCWWGG | 7 cut(s) | 395, 476, 578, 735, 1006, 1396, 1535 |
| Bst2UI | CCWGG | 4 cut(s) | 494, 535, 1273, 1422 |
| Bst4CI | ACNGT | 1 cut(s) | 771 |
| Bst6I | CTCTTC | 1 cut(s) | 1028 |
| BstBI | TTCGAA | 1 cut(s) | 1026 |
| BstC8I | GCNNGC | 4 cut(s) | 40, 166, 742, 1002 |
| BstDEI | CTNAG | 3 cut(s) | 498, 1107, 1178 |
| BstDSI | CCRYGG | 1 cut(s) | 432 |
| BstF5I | GGATG | 3 cut(s) | 1239, 1311, 1545 |
| BstFNI | CGCG | 1 cut(s) | 1497 |
| BstHHI | GCGC | 1 cut(s) | 1499 |
| BstMAI | GTCTC | 1 cut(s) | 1343 |
| BstMCI | CGRYCG | 1 cut(s) | 275 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 508, 715, 920, 1171, 1296, 1372 |
| BstNI | CCWGG | 4 cut(s) | 494, 535, 1273, 1422 |
| BstNSI | RCATGY | 3 cut(s) | 63, 378, 1525 |
| BstSCI | CCNGG | 7 cut(s) | 420, 492, 528, 533, 1271, 1420, 1525 |
| BstUI | CGCG | 1 cut(s) | 1497 |
| BstV1I | GCAGC | 3 cut(s) | 375, 847, 1123 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 681 |
| BtgI | CCRYGG | 1 cut(s) | 432 |
| BtsCI | GGATG | 3 cut(s) | 1239, 1311, 1545 |
| BtsIMutI | CAGTG | 1 cut(s) | 629 |
| Cac8I | GCNNGC | 4 cut(s) | 40, 166, 742, 1002 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1576 |
| CfoI | GCGC | 1 cut(s) | 1499 |
| Cfr10I | RCCGGY | 5 cut(s) | 199, 274, 740, 1000, 1483 |
| Cfr13I | GGNCC | 8 cut(s) | 152, 531, 575, 670, 1003, 1332, 1418, 1543 |
| CseI | GACGC | 1 cut(s) | 1346 |
| Csp6I | GTAC | 2 cut(s) | 1260, 1434 |
| CspAI | ACCGGT | 1 cut(s) | 274 |
| CviAII | CATG | 8 cut(s) | 60, 80, 375, 720, 889, 1069, 1161, 1522 |
| CviQI | GTAC | 2 cut(s) | 1260, 1434 |
| DdeI | CTNAG | 3 cut(s) | 498, 1107, 1178 |
| EaeI | YGGCCR | 3 cut(s) | 716, 738, 1492 |
| Eam1104I | CTCTTC | 1 cut(s) | 1028 |
| EarI | CTCTTC | 1 cut(s) | 1028 |
| EciI | GGCGGA | 3 cut(s) | 502, 1142, 1161 |
| Eco130I | CCWWGG | 7 cut(s) | 395, 476, 578, 735, 1006, 1396, 1535 |
| Eco24I | GRGCYC | 1 cut(s) | 1428 |
| Eco47I | GGWCC | 2 cut(s) | 670, 1332 |
| Eco57I | CTGAAG | 1 cut(s) | 965 |
| Eco88I | CYCGRG | 1 cut(s) | 881 |
| EcoRII | CCWGG | 4 cut(s) | 492, 533, 1271, 1420 |
| EcoT14I | CCWWGG | 7 cut(s) | 395, 476, 578, 735, 1006, 1396, 1535 |
| EcoT38I | GRGCYC | 1 cut(s) | 1428 |
| ErhI | CCWWGG | 7 cut(s) | 395, 476, 578, 735, 1006, 1396, 1535 |
| Esp3I | CGTCTC | 1 cut(s) | 1343 |
| FaeI | CATG | 8 cut(s) | 63, 83, 378, 723, 892, 1072, 1164, 1525 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 409, 441 |
| FaqI | GGGAC | 2 cut(s) | 320, 1564 |
| FatI | CATG | 8 cut(s) | 59, 79, 374, 719, 888, 1068, 1160, 1521 |
| FauI | CCCGC | 1 cut(s) | 1107 |
| Fnu4HI | GCNGC | 7 cut(s) | 361, 364, 784, 861, 1112, 1376, 1495 |
| FokI | GGATG | 3 cut(s) | 1246, 1318, 1552 |
| FriOI | GRGCYC | 1 cut(s) | 1428 |
| Fsp4HI | GCNGC | 7 cut(s) | 361, 364, 784, 861, 1112, 1376, 1495 |
| FspBI | CTAG | 3 cut(s) | 396, 477, 1536 |
| GlaI | GCGC | 1 cut(s) | 1498 |
| GluI | GCNGC | 7 cut(s) | 361, 364, 784, 861, 1112, 1376, 1495 |
| GsaI | CCCAGC | 1 cut(s) | 515 |
| GsuI | CTGGAG | 1 cut(s) | 1279 |
| HapII | CCGG | 8 cut(s) | 200, 275, 421, 529, 741, 1001, 1484, 1526 |
| HgaI | GACGC | 1 cut(s) | 1346 |
| HhaI | GCGC | 1 cut(s) | 1499 |
| Hin1II | CATG | 8 cut(s) | 63, 83, 378, 723, 892, 1072, 1164, 1525 |
| Hin6I | GCGC | 1 cut(s) | 1497 |
| HinP1I | GCGC | 1 cut(s) | 1497 |
| HincII | GTYRAC | 1 cut(s) | 666 |
| HindII | GTYRAC | 1 cut(s) | 666 |
| HinfI | GANTC | 8 cut(s) | 157, 301, 463, 589, 728, 884, 1028, 1441 |
| HpaII | CCGG | 8 cut(s) | 200, 275, 421, 529, 741, 1001, 1484, 1526 |
| HphI | GGTGA | 3 cut(s) | 472, 826, 1058 |
| Hpy166II | GTNNAC | 2 cut(s) | 666, 878 |
| Hpy188I | TCNGA | 8 cut(s) | 125, 519, 561, 779, 945, 1252, 1336, 1572 |
| Hpy188III | TCNNGA | 5 cut(s) | 30, 305, 523, 725, 1231 |
| Hpy8I | GTNNAC | 2 cut(s) | 666, 878 |
| Hpy99I | CGWCG | 3 cut(s) | 208, 322, 1340 |
| HpyAV | CCTTC | 5 cut(s) | 238, 403, 1103, 1134, 1272 |
| HpyCH4III | ACNGT | 1 cut(s) | 771 |
| HpyCH4V | TGCA | 7 cut(s) | 197, 380, 808, 863, 923, 1196, 1290 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 508, 715, 920, 1171, 1296, 1372 |
| HpyF3I | CTNAG | 3 cut(s) | 498, 1107, 1178 |
| Hsp92II | CATG | 8 cut(s) | 63, 83, 378, 723, 892, 1072, 1164, 1525 |
| HspAI | GCGC | 1 cut(s) | 1497 |
| KroI | GCCGGC | 2 cut(s) | 740, 1000 |
| KroNI | GCCGGC | 2 cut(s) | 742, 1002 |
| LmnI | GCTCC | 2 cut(s) | 1095, 1129 |
| Lsp1109I | GCAGC | 3 cut(s) | 375, 847, 1123 |
| LweI | GCATC | 4 cut(s) | 770, 901, 1213, 1349 |
| MaeI | CTAG | 3 cut(s) | 396, 477, 1536 |
| MaeIII | GTNAC | 2 cut(s) | 27, 1461 |
| MboII | GAAGA | 2 cut(s) | 774, 1015 |
| MfeI | CAATTG | 1 cut(s) | 972 |
| MhlI | GDGCHC | 3 cut(s) | 166, 608, 1428 |
| MluCI | AATT | 5 cut(s) | 178, 677, 748, 972, 1391 |
| MlyI | GAGTC | 2 cut(s) | 166, 893 |
| MmeI | TCCRAC | 2 cut(s) | 497, 1359 |
| MroNI | GCCGGC | 2 cut(s) | 740, 1000 |
| MseI | TTAA | 1 cut(s) | 696 |
| MslI | CAYNNNNRTG | 2 cut(s) | 679, 718 |
| MspA1I | CMGCKG | 2 cut(s) | 502, 1114 |
| MspI | CCGG | 8 cut(s) | 200, 275, 421, 529, 741, 1001, 1484, 1526 |
| MspR9I | CCNGG | 7 cut(s) | 422, 494, 530, 535, 1273, 1422, 1527 |
| MunI | CAATTG | 1 cut(s) | 972 |
| MvaI | CCWGG | 4 cut(s) | 494, 535, 1273, 1422 |
| MvnI | CGCG | 1 cut(s) | 1497 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 508, 715, 920, 1171, 1296, 1372 |
| NaeI | GCCGGC | 2 cut(s) | 742, 1002 |
| NciI | CCSGG | 3 cut(s) | 422, 530, 1527 |
| NgoMIV | GCCGGC | 2 cut(s) | 740, 1000 |
| NlaIII | CATG | 8 cut(s) | 63, 83, 378, 723, 892, 1072, 1164, 1525 |
| NlaIV | GGNNCC | 8 cut(s) | 393, 474, 491, 527, 558, 672, 1091, 1170 |
| NmeAIII | GCCGAG | 2 cut(s) | 26, 180 |
| NmuCI | GTSAC | 1 cut(s) | 27 |
| NspI | RCATGY | 3 cut(s) | 63, 378, 1525 |
| NspV | TTCGAA | 1 cut(s) | 1026 |
| PciI | ACATGT | 1 cut(s) | 59 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1344 |
| PdiI | GCCGGC | 2 cut(s) | 742, 1002 |
| PfeI | GAWTC | 6 cut(s) | 301, 463, 589, 728, 1028, 1441 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1552 |
| PinAI | ACCGGT | 1 cut(s) | 274 |
| PkrI | GCNGC | 7 cut(s) | 362, 365, 785, 862, 1113, 1377, 1496 |
| PleI | GAGTC | 2 cut(s) | 165, 892 |
| PpsI | GAGTC | 2 cut(s) | 165, 892 |
| PscI | ACATGT | 1 cut(s) | 59 |
| Psp6I | CCWGG | 4 cut(s) | 492, 533, 1271, 1420 |
| PspFI | CCCAGC | 1 cut(s) | 511 |
| PspGI | CCWGG | 4 cut(s) | 492, 533, 1271, 1420 |
| PspN4I | GGNNCC | 8 cut(s) | 393, 474, 491, 527, 558, 672, 1091, 1170 |
| PspPI | GGNCC | 8 cut(s) | 152, 531, 575, 670, 1003, 1332, 1418, 1543 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1576 |
| PvuII | CAGCTG | 1 cut(s) | 502 |
| RsaI | GTAC | 2 cut(s) | 1261, 1435 |
| RsaNI | GTAC | 2 cut(s) | 1260, 1434 |
| RseI | CAYNNNNRTG | 2 cut(s) | 679, 718 |
| SaqAI | TTAA | 1 cut(s) | 696 |
| SatI | GCNGC | 7 cut(s) | 361, 364, 784, 861, 1112, 1376, 1495 |
| Sau96I | GGNCC | 8 cut(s) | 152, 531, 575, 670, 1003, 1332, 1418, 1543 |
| SchI | GAGTC | 2 cut(s) | 166, 893 |
| ScrFI | CCNGG | 7 cut(s) | 422, 494, 530, 535, 1273, 1422, 1527 |
| SduI | GDGCHC | 3 cut(s) | 166, 608, 1428 |
| SfaNI | GCATC | 4 cut(s) | 770, 901, 1213, 1349 |
| SfuI | TTCGAA | 1 cut(s) | 1026 |
| SgrAI | CRCCGGYG | 1 cut(s) | 199 |
| SinI | GGWCC | 2 cut(s) | 670, 1332 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 679, 718 |
| Sse9I | AATT | 5 cut(s) | 178, 677, 748, 972, 1391 |
| SspMI | CTAG | 3 cut(s) | 396, 477, 1536 |
| StyD4I | CCNGG | 7 cut(s) | 420, 492, 528, 533, 1271, 1420, 1525 |
| StyI | CCWWGG | 7 cut(s) | 395, 476, 578, 735, 1006, 1396, 1535 |
| TaaI | ACNGT | 1 cut(s) | 771 |
| TaqI | TCGA | 5 cut(s) | 160, 233, 281, 1012, 1026 |
| TasI | AATT | 5 cut(s) | 178, 677, 748, 972, 1391 |
| TauI | GCSGC | 4 cut(s) | 363, 786, 1378, 1497 |
| TfiI | GAWTC | 6 cut(s) | 301, 463, 589, 728, 1028, 1441 |
| Tru1I | TTAA | 1 cut(s) | 696 |
| Tru9I | TTAA | 1 cut(s) | 696 |
| TscAI | CASTG | 1 cut(s) | 629 |
| TseFI | GTSAC | 1 cut(s) | 27 |
| TseI | GCWGC | 3 cut(s) | 363, 860, 1111 |
| Tsp45I | GTSAC | 1 cut(s) | 27 |
| TspDTI | ATGAA | 2 cut(s) | 68, 924 |
| TspGWI | ACGGA | 4 cut(s) | 15, 431, 683, 857 |
| TspRI | CASTG | 1 cut(s) | 629 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1552 |
| VpaK11BI | GGWCC | 2 cut(s) | 670, 1332 |
| XapI | RAATTY | 1 cut(s) | 178 |
| XceI | RCATGY | 3 cut(s) | 63, 378, 1525 |
| XmaJI | CCTAGG | 3 cut(s) | 395, 476, 1535 |
| XspI | CTAG | 3 cut(s) | 396, 477, 1536 |