FvH4_2g06290

B3 domain-containing protein Os01g0234100-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
5230278 .. 5232377
2100 bp
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UTR
Exon/CDS
Intron
FvH4_2g06290.t2

Sequence Viewer

Length: 213 bp
ATGGTAAATGCTAAATCAATCAAGTCTGAAAGTCTTAAACCGAAGAGAATAAAAAGAGCGACAGAAGAAAGTGTTTATGACACTTCCAAATCTCAGCTTTCTGTTATGGAAAGAGCGAAAGCGGTTGAAGCAAGTTTAGCACCAGAGTTTCCTAGACTGATCAAAGTTATTACCATCGCATGTTACTGGAGGATTCTGGCTTGGTCTTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

71

Amino Acids

8.02

Weight (kDa)

9.78

Isoelectric Point (pI)

45.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 122
AgsI TTSAA 1 cut(s) 128
AluBI AGCT 1 cut(s) 97
AluI AGCT 1 cut(s) 97
BccI CCATC 1 cut(s) 182
BclI TGATCA 1 cut(s) 159
BfaI CTAG 1 cut(s) 153
BpmI CTGGAG 1 cut(s) 208
Bse1I ACTGG 1 cut(s) 191
BseMII CTCAG 1 cut(s) 107
BseNI ACTGG 1 cut(s) 191
Bsp143I GATC 1 cut(s) 159
BspACI CCGC 1 cut(s) 122
BspCNI CTCAG 1 cut(s) 106
BsrI ACTGG 1 cut(s) 191
BssMI GATC 1 cut(s) 159
Bst6I CTCTTC 1 cut(s) 38
BstDEI CTNAG 1 cut(s) 93
BstKTI GATC 1 cut(s) 162
BstMBI GATC 1 cut(s) 159
BstMWI GCNNNNNNNGC 2 cut(s) 128, 137
BstNSI RCATGY 1 cut(s) 183
BtgZI GCGATG 1 cut(s) 160
CviAII CATG 1 cut(s) 180
CviJI RGCY 2 cut(s) 97, 200
CviKI_1 RGCY 2 cut(s) 97, 200
DdeI CTNAG 1 cut(s) 93
DpnI GATC 1 cut(s) 161
DpnII GATC 1 cut(s) 159
Eam1104I CTCTTC 1 cut(s) 38
EarI CTCTTC 1 cut(s) 38
FaeI CATG 1 cut(s) 183
FaiI YATR 3 cut(s) 78, 107, 181
FatI CATG 1 cut(s) 179
FbaI TGATCA 1 cut(s) 159
FspBI CTAG 1 cut(s) 153
GsuI CTGGAG 1 cut(s) 208
Hin1II CATG 1 cut(s) 183
HinfI GANTC 1 cut(s) 193
Hpy188I TCNGA 1 cut(s) 28
HpyF10VI GCNNNNNNNGC 2 cut(s) 128, 137
HpyF3I CTNAG 1 cut(s) 93
Hsp92II CATG 1 cut(s) 183
Ksp22I TGATCA 1 cut(s) 159
Kzo9I GATC 1 cut(s) 159
LpnPI CCDG 3 cut(s) 156, 172, 182
MaeI CTAG 1 cut(s) 153
MaeIII GTNAC 1 cut(s) 182
MalI GATC 1 cut(s) 161
MboI GATC 1 cut(s) 159
MboII GAAGA 2 cut(s) 55, 77
MnlI CCTC 1 cut(s) 183
MseI TTAA 1 cut(s) 36
MwoI GCNNNNNNNGC 2 cut(s) 128, 137
NdeII GATC 1 cut(s) 159
NlaIII CATG 1 cut(s) 183
NspI RCATGY 1 cut(s) 183
PfeI GAWTC 1 cut(s) 193
SaqAI TTAA 1 cut(s) 36
Sau3AI GATC 1 cut(s) 159
SetI ASST 1 cut(s) 99
SgeI CNNG 7 cut(s) 34, 144, 155, 165, 192, 199, 209
SsiI CCGC 1 cut(s) 122
SspMI CTAG 1 cut(s) 153
TfiI GAWTC 1 cut(s) 193
Tru1I TTAA 1 cut(s) 36
Tru9I TTAA 1 cut(s) 36
XceI RCATGY 1 cut(s) 183
XspI CTAG 1 cut(s) 153
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.