RchiOBHm_Chr7g0241311

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
67409503 .. 67409816
314 bp
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UTR
Exon/CDS
Intron
PRQ21625

Sequence Viewer

Length: 165 bp
ATGGCGGCTCAATTTGAGCAACAGTTAGATCGTGCTAAAGGAGGAAAACGAAAAGTGACTAGTAGACAGGAAATGGCAGTTCGGTGTCTGATTGGGACGCACCTTACCTTTCCGGAAAGGGAATCGCGCCAGAAACAAGACTCATCGCTTTGCCATGAGCTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

54

Amino Acids

6.23

Weight (kDa)

9.3

Isoelectric Point (pI)

74.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 64
AccII CGCG 1 cut(s) 127
AccIII TCCGGA 1 cut(s) 112
AciI CCGC 1 cut(s) 5
AhlI ACTAGT 1 cut(s) 59
AluBI AGCT 1 cut(s) 160
AluI AGCT 1 cut(s) 160
Aor13HI TCCGGA 1 cut(s) 112
AspLEI GCGC 1 cut(s) 129
BcuI ACTAGT 1 cut(s) 59
BfaI CTAG 1 cut(s) 60
BfmI CTRYAG 1 cut(s) 161
BisI GCNGC 1 cut(s) 6
BlsI GCNGC 1 cut(s) 7
BsaWI WCCGGW 1 cut(s) 112
BseAI TCCGGA 1 cut(s) 112
Bsh1236I CGCG 1 cut(s) 127
BsiSI CCGG 1 cut(s) 113
BslFI GGGAC 1 cut(s) 109
BsmFI GGGAC 1 cut(s) 109
Bsp13I TCCGGA 1 cut(s) 112
Bsp143I GATC 1 cut(s) 28
BspACI CCGC 1 cut(s) 5
BspEI TCCGGA 1 cut(s) 112
BspFNI CGCG 1 cut(s) 127
BssMI GATC 1 cut(s) 28
Bst4CI ACNGT 1 cut(s) 24
BstFNI CGCG 1 cut(s) 127
BstHHI GCGC 1 cut(s) 129
BstKTI GATC 1 cut(s) 31
BstMBI GATC 1 cut(s) 28
BstSFI CTRYAG 1 cut(s) 161
BstUI CGCG 1 cut(s) 127
BtgZI GCGATG 1 cut(s) 129
CfoI GCGC 1 cut(s) 129
CseI GACGC 1 cut(s) 106
CviAII CATG 1 cut(s) 155
CviJI RGCY 2 cut(s) 8, 160
CviKI_1 RGCY 2 cut(s) 8, 160
DpnI GATC 1 cut(s) 30
DpnII GATC 1 cut(s) 28
FaeI CATG 1 cut(s) 158
FaiI YATR 1 cut(s) 156
FaqI GGGAC 1 cut(s) 109
FatI CATG 1 cut(s) 154
FblI GTMKAC 1 cut(s) 64
Fnu4HI GCNGC 1 cut(s) 6
Fsp4HI GCNGC 1 cut(s) 6
FspBI CTAG 1 cut(s) 60
GlaI GCGC 1 cut(s) 128
GluI GCNGC 1 cut(s) 6
HapII CCGG 1 cut(s) 113
HgaI GACGC 1 cut(s) 106
HhaI GCGC 1 cut(s) 129
Hin1II CATG 1 cut(s) 158
Hin6I GCGC 1 cut(s) 127
HinP1I GCGC 1 cut(s) 127
HinfI GANTC 2 cut(s) 122, 140
HpaII CCGG 1 cut(s) 113
Hpy166II GTNNAC 1 cut(s) 65
Hpy188I TCNGA 1 cut(s) 90
Hpy188III TCNNGA 1 cut(s) 113
Hpy8I GTNNAC 1 cut(s) 65
HpyCH4III ACNGT 1 cut(s) 24
Hsp92II CATG 1 cut(s) 158
HspAI GCGC 1 cut(s) 127
Kpn2I TCCGGA 1 cut(s) 112
Kzo9I GATC 1 cut(s) 28
LpnPI CCDG 3 cut(s) 53, 126, 143
MaeI CTAG 1 cut(s) 60
MaeIII GTNAC 1 cut(s) 55
MalI GATC 1 cut(s) 30
MboI GATC 1 cut(s) 28
MluCI AATT 1 cut(s) 11
MlyI GAGTC 1 cut(s) 134
MnlI CCTC 1 cut(s) 35
MroI TCCGGA 1 cut(s) 112
MspI CCGG 1 cut(s) 113
MvnI CGCG 1 cut(s) 127
NdeII GATC 1 cut(s) 28
NlaIII CATG 1 cut(s) 158
NmuCI GTSAC 1 cut(s) 55
PfeI GAWTC 1 cut(s) 122
PkrI GCNGC 1 cut(s) 7
PleI GAGTC 1 cut(s) 134
PpsI GAGTC 1 cut(s) 134
SatI GCNGC 1 cut(s) 6
Sau3AI GATC 1 cut(s) 28
SchI GAGTC 1 cut(s) 134
SetI ASST 3 cut(s) 105, 110, 162
SfcI CTRYAG 1 cut(s) 161
SgeI CNNG 7 cut(s) 44, 72, 80, 125, 138, 142, 149
SpeI ACTAGT 1 cut(s) 59
Sse9I AATT 1 cut(s) 11
SsiI CCGC 1 cut(s) 5
SspMI CTAG 1 cut(s) 60
TaaI ACNGT 1 cut(s) 24
TasI AATT 1 cut(s) 11
TauI GCSGC 1 cut(s) 8
TfiI GAWTC 1 cut(s) 122
TseFI GTSAC 1 cut(s) 55
Tsp45I GTSAC 1 cut(s) 55
XmiI GTMKAC 1 cut(s) 64
XspI CTAG 1 cut(s) 60
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.