No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g15710 FvH4_2g15711 FvH4_2g15720 FvH4_2g15721 |
| prunus_persica | Prupe.8G169600_v2.0.a1 |
| pyrus_communis | pycom05g12070 pycom10g11060 |
| rosa_laevigata | RLG00000013172 RLG00000013173 RLG00000013174 RLG00000013175 |
| rosa_multiflora | Rmu_sc0002080.1_g000015 |
| rosa_roxburghii | Rroxscaffold_7G00189200 Rroxscaffold_7G00189210 |
| rosa_rugosa | Rorug06G0121000 Rorug06G0121100 Rorug06G0121200.1 |
| rosa_samantha | Rh6AG229900 Rh6AG230000 Rh6AG230200 Rh6AG230300 Rh6BG235000 Rh6BG235100 Rh6BG235200 Rh6CG237000 Rh6CG237100 Rh6CG237300 Rh6DG228800 Rh6DG228900 Rh6DG229000 Rh6DG229100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 405 |
| AcsI | RAATTY | 3 cut(s) | 382, 412, 450 |
| AcyI | GRCGYC | 1 cut(s) | 406 |
| AfaI | GTAC | 1 cut(s) | 120 |
| AgsI | TTSAA | 1 cut(s) | 46 |
| ApoI | RAATTY | 3 cut(s) | 382, 412, 450 |
| AspLEI | GCGC | 3 cut(s) | 55, 378, 408 |
| AsuHPI | GGTGA | 1 cut(s) | 66 |
| BanI | GGYRCC | 1 cut(s) | 405 |
| BbsI | GAAGAC | 1 cut(s) | 195 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 345, 379 |
| BclI | TGATCA | 1 cut(s) | 150 |
| BfoI | RGCGCY | 2 cut(s) | 379, 409 |
| BmiI | GGNNCC | 1 cut(s) | 407 |
| BmsI | GCATC | 2 cut(s) | 47, 387 |
| BpiI | GAAGAC | 1 cut(s) | 195 |
| BsaHI | GRCGYC | 1 cut(s) | 406 |
| Bse3DI | GCAATG | 2 cut(s) | 109, 331 |
| BseGI | GGATG | 1 cut(s) | 213 |
| BseMI | GCAATG | 2 cut(s) | 109, 331 |
| BseMII | CTCAG | 2 cut(s) | 98, 197 |
| BseRI | GAGGAG | 1 cut(s) | 386 |
| BshNI | GGYRCC | 1 cut(s) | 405 |
| BslFI | GGGAC | 1 cut(s) | 42 |
| BsmFI | GGGAC | 1 cut(s) | 42 |
| Bsp143I | GATC | 3 cut(s) | 71, 80, 150 |
| BspCNI | CTCAG | 2 cut(s) | 97, 196 |
| BspLI | GGNNCC | 1 cut(s) | 407 |
| BspQI | GCTCTTC | 1 cut(s) | 62 |
| BspT107I | GGYRCC | 1 cut(s) | 405 |
| BsrDI | GCAATG | 2 cut(s) | 109, 331 |
| BssMI | GATC | 3 cut(s) | 71, 80, 150 |
| BssNI | GRCGYC | 1 cut(s) | 406 |
| Bst4CI | ACNGT | 2 cut(s) | 274, 363 |
| Bst6I | CTCTTC | 2 cut(s) | 41, 62 |
| BstACI | GRCGYC | 1 cut(s) | 406 |
| BstDEI | CTNAG | 3 cut(s) | 84, 122, 183 |
| BstF5I | GGATG | 1 cut(s) | 213 |
| BstH2I | RGCGCY | 2 cut(s) | 379, 409 |
| BstHHI | GCGC | 3 cut(s) | 55, 378, 408 |
| BstKTI | GATC | 3 cut(s) | 74, 83, 153 |
| BstMBI | GATC | 3 cut(s) | 71, 80, 150 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 247, 353 |
| BstNSI | RCATGY | 1 cut(s) | 119 |
| BstV2I | GAAGAC | 1 cut(s) | 195 |
| BtsCI | GGATG | 1 cut(s) | 213 |
| BtsIMutI | CAGTG | 1 cut(s) | 359 |
| CfoI | GCGC | 3 cut(s) | 55, 378, 408 |
| Csp6I | GTAC | 1 cut(s) | 119 |
| CviAII | CATG | 1 cut(s) | 116 |
| CviQI | GTAC | 1 cut(s) | 119 |
| DdeI | CTNAG | 3 cut(s) | 84, 122, 183 |
| DinI | GGCGCC | 1 cut(s) | 407 |
| DpnI | GATC | 3 cut(s) | 73, 82, 152 |
| DpnII | GATC | 3 cut(s) | 71, 80, 150 |
| Eam1104I | CTCTTC | 2 cut(s) | 41, 62 |
| EarI | CTCTTC | 2 cut(s) | 41, 62 |
| Eco32I | GATATC | 1 cut(s) | 160 |
| EcoRV | GATATC | 1 cut(s) | 160 |
| EcoT22I | ATGCAT | 1 cut(s) | 402 |
| EgeI | GGCGCC | 1 cut(s) | 407 |
| EheI | GGCGCC | 1 cut(s) | 407 |
| FaeI | CATG | 1 cut(s) | 119 |
| FaiI | YATR | 6 cut(s) | 117, 135, 257, 267, 342, 402 |
| FaqI | GGGAC | 1 cut(s) | 42 |
| FatI | CATG | 1 cut(s) | 115 |
| FbaI | TGATCA | 1 cut(s) | 150 |
| FokI | GGATG | 1 cut(s) | 220 |
| GlaI | GCGC | 3 cut(s) | 54, 377, 407 |
| HaeII | RGCGCY | 2 cut(s) | 379, 409 |
| HhaI | GCGC | 3 cut(s) | 55, 378, 408 |
| Hin1I | GRCGYC | 1 cut(s) | 406 |
| Hin1II | CATG | 1 cut(s) | 119 |
| Hin6I | GCGC | 3 cut(s) | 53, 376, 406 |
| HinP1I | GCGC | 3 cut(s) | 53, 376, 406 |
| HinfI | GANTC | 4 cut(s) | 181, 262, 289, 421 |
| HphI | GGTGA | 1 cut(s) | 66 |
| Hpy188I | TCNGA | 2 cut(s) | 62, 87 |
| Hpy188III | TCNNGA | 2 cut(s) | 185, 332 |
| HpyAV | CCTTC | 1 cut(s) | 224 |
| HpyCH4III | ACNGT | 2 cut(s) | 274, 363 |
| HpyCH4IV | ACGT | 1 cut(s) | 306 |
| HpyCH4V | TGCA | 4 cut(s) | 115, 133, 143, 400 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 247, 353 |
| HpyF3I | CTNAG | 3 cut(s) | 84, 122, 183 |
| HpySE526I | ACGT | 1 cut(s) | 306 |
| Hsp92I | GRCGYC | 1 cut(s) | 406 |
| Hsp92II | CATG | 1 cut(s) | 119 |
| HspAI | GCGC | 3 cut(s) | 53, 376, 406 |
| KasI | GGCGCC | 1 cut(s) | 405 |
| Ksp22I | TGATCA | 1 cut(s) | 150 |
| Kzo9I | GATC | 3 cut(s) | 71, 80, 150 |
| LguI | GCTCTTC | 1 cut(s) | 62 |
| LmnI | GCTCC | 2 cut(s) | 238, 373 |
| LpnPI | CCDG | 5 cut(s) | 11, 170, 438, 443, 456 |
| LweI | GCATC | 2 cut(s) | 47, 387 |
| MaeII | ACGT | 1 cut(s) | 306 |
| MaeIII | GTNAC | 1 cut(s) | 274 |
| MalI | GATC | 3 cut(s) | 73, 82, 152 |
| MboI | GATC | 3 cut(s) | 71, 80, 150 |
| MboII | GAAGA | 6 cut(s) | 49, 58, 100, 200, 223, 458 |
| MfeI | CAATTG | 1 cut(s) | 138 |
| MluCI | AATT | 5 cut(s) | 138, 168, 382, 412, 450 |
| Mly113I | GGCGCC | 1 cut(s) | 406 |
| MlyI | GAGTC | 2 cut(s) | 175, 430 |
| MnlI | CCTC | 4 cut(s) | 87, 314, 364, 384 |
| Mph1103I | ATGCAT | 1 cut(s) | 402 |
| MunI | CAATTG | 1 cut(s) | 138 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 247, 353 |
| NarI | GGCGCC | 1 cut(s) | 406 |
| NdeII | GATC | 3 cut(s) | 71, 80, 150 |
| NlaIII | CATG | 1 cut(s) | 119 |
| NlaIV | GGNNCC | 1 cut(s) | 407 |
| NmuCI | GTSAC | 1 cut(s) | 274 |
| NsiI | ATGCAT | 1 cut(s) | 402 |
| NspI | RCATGY | 1 cut(s) | 119 |
| PciSI | GCTCTTC | 1 cut(s) | 62 |
| PfeI | GAWTC | 2 cut(s) | 262, 289 |
| PleI | GAGTC | 2 cut(s) | 175, 429 |
| PluTI | GGCGCC | 1 cut(s) | 409 |
| PpsI | GAGTC | 2 cut(s) | 175, 429 |
| PspN4I | GGNNCC | 1 cut(s) | 407 |
| RsaI | GTAC | 1 cut(s) | 120 |
| RsaNI | GTAC | 1 cut(s) | 119 |
| SapI | GCTCTTC | 1 cut(s) | 62 |
| Sau3AI | GATC | 3 cut(s) | 71, 80, 150 |
| SchI | GAGTC | 2 cut(s) | 175, 430 |
| SetI | ASST | 5 cut(s) | 8, 79, 168, 235, 309 |
| SfaNI | GCATC | 2 cut(s) | 47, 387 |
| SfoI | GGCGCC | 1 cut(s) | 407 |
| Sse9I | AATT | 5 cut(s) | 138, 168, 382, 412, 450 |
| SspDI | GGCGCC | 1 cut(s) | 405 |
| TaaI | ACNGT | 2 cut(s) | 274, 363 |
| TaiI | ACGT | 1 cut(s) | 309 |
| TaqI | TCGA | 3 cut(s) | 79, 179, 365 |
| TasI | AATT | 5 cut(s) | 138, 168, 382, 412, 450 |
| TatI | WGTACW | 1 cut(s) | 118 |
| TfiI | GAWTC | 2 cut(s) | 262, 289 |
| TscAI | CASTG | 1 cut(s) | 366 |
| TseFI | GTSAC | 1 cut(s) | 274 |
| Tsp45I | GTSAC | 1 cut(s) | 274 |
| TspDTI | ATGAA | 2 cut(s) | 224, 357 |
| TspRI | CASTG | 1 cut(s) | 366 |
| XapI | RAATTY | 3 cut(s) | 382, 412, 450 |
| XceI | RCATGY | 1 cut(s) | 119 |
| Zsp2I | ATGCAT | 1 cut(s) | 402 |