Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g15710 FvH4_2g15711 FvH4_2g15720 FvH4_2g15721 |
| prunus_persica | Prupe.8G169600_v2.0.a1 |
| pyrus_communis | pycom05g12070 pycom10g11060 |
| rosa_laevigata | RLG00000013172 RLG00000013173 RLG00000013174 RLG00000013175 |
| rosa_multiflora | Rmu_sc0002080.1_g000015 |
| rosa_roxburghii | Rroxscaffold_7G00189200 Rroxscaffold_7G00189210 |
| rosa_rugosa | Rorug06G0121000 Rorug06G0121100 Rorug06G0121200.1 |
| rosa_samantha | Rh6AG229900 Rh6AG230000 Rh6AG230200 Rh6AG230300 Rh6BG235000 Rh6BG235100 Rh6BG235200 Rh6CG237000 Rh6CG237100 Rh6CG237300 Rh6DG228800 Rh6DG228900 Rh6DG229000 Rh6DG229100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 417 |
| AciI | CCGC | 1 cut(s) | 403 |
| AcsI | RAATTY | 1 cut(s) | 462 |
| AcyI | GRCGYC | 1 cut(s) | 418 |
| AfaI | GTAC | 2 cut(s) | 132, 186 |
| AfeI | AGCGCT | 1 cut(s) | 69 |
| AgsI | TTSAA | 1 cut(s) | 232 |
| AjnI | CCWGG | 1 cut(s) | 92 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 239, 271 |
| Aor51HI | AGCGCT | 1 cut(s) | 69 |
| ApeKI | GCWGC | 2 cut(s) | 143, 218 |
| ApoI | RAATTY | 1 cut(s) | 462 |
| AspLEI | GCGC | 3 cut(s) | 70, 390, 420 |
| AsuC2I | CCSGG | 1 cut(s) | 455 |
| AsuHPI | GGTGA | 2 cut(s) | 172, 356 |
| BanI | GGYRCC | 1 cut(s) | 417 |
| BbsI | GAAGAC | 1 cut(s) | 213 |
| BbvI | GCAGC | 2 cut(s) | 130, 205 |
| BccI | CCATC | 1 cut(s) | 458 |
| BciT130I | CCWGG | 1 cut(s) | 94 |
| BcnI | CCSGG | 1 cut(s) | 455 |
| BfmI | CTRYAG | 1 cut(s) | 219 |
| BfoI | RGCGCY | 3 cut(s) | 71, 391, 421 |
| BisI | GCNGC | 2 cut(s) | 144, 219 |
| BlsI | GCNGC | 2 cut(s) | 145, 220 |
| Bme1390I | CCNGG | 2 cut(s) | 94, 455 |
| BmiI | GGNNCC | 1 cut(s) | 419 |
| BmrFI | CCNGG | 2 cut(s) | 94, 455 |
| BmrI | ACTGGG | 1 cut(s) | 187 |
| BmsI | GCATC | 2 cut(s) | 62, 377 |
| BmuI | ACTGGG | 1 cut(s) | 187 |
| BpiI | GAAGAC | 1 cut(s) | 213 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 424, 456 |
| BpuMI | CCSGG | 1 cut(s) | 455 |
| BsaHI | GRCGYC | 1 cut(s) | 418 |
| Bse1I | ACTGG | 1 cut(s) | 193 |
| Bse3DI | GCAATG | 1 cut(s) | 150 |
| BseBI | CCWGG | 1 cut(s) | 94 |
| BseGI | GGATG | 1 cut(s) | 450 |
| BseMI | GCAATG | 1 cut(s) | 150 |
| BseNI | ACTGG | 1 cut(s) | 193 |
| BseRI | GAGGAG | 1 cut(s) | 398 |
| BseXI | GCAGC | 2 cut(s) | 130, 205 |
| BshNI | GGYRCC | 1 cut(s) | 417 |
| BsiSI | CCGG | 1 cut(s) | 455 |
| Bsp143I | GATC | 1 cut(s) | 86 |
| BspACI | CCGC | 1 cut(s) | 403 |
| BspHI | TCATGA | 1 cut(s) | 276 |
| BspLI | GGNNCC | 1 cut(s) | 419 |
| BspMAI | CTGCAG | 1 cut(s) | 223 |
| BspT107I | GGYRCC | 1 cut(s) | 417 |
| BsrDI | GCAATG | 1 cut(s) | 150 |
| BsrI | ACTGG | 1 cut(s) | 193 |
| BssMI | GATC | 1 cut(s) | 86 |
| BssNI | GRCGYC | 1 cut(s) | 418 |
| Bst2UI | CCWGG | 1 cut(s) | 94 |
| Bst4CI | ACNGT | 2 cut(s) | 176, 305 |
| BstACI | GRCGYC | 1 cut(s) | 418 |
| BstC8I | GCNNGC | 1 cut(s) | 10 |
| BstF5I | GGATG | 1 cut(s) | 450 |
| BstH2I | RGCGCY | 3 cut(s) | 71, 391, 421 |
| BstHHI | GCGC | 3 cut(s) | 70, 390, 420 |
| BstKTI | GATC | 1 cut(s) | 89 |
| BstMBI | GATC | 1 cut(s) | 86 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 152, 409 |
| BstNI | CCWGG | 1 cut(s) | 94 |
| BstSCI | CCNGG | 2 cut(s) | 92, 453 |
| BstSFI | CTRYAG | 1 cut(s) | 219 |
| BstV1I | GCAGC | 2 cut(s) | 130, 205 |
| BstV2I | GAAGAC | 1 cut(s) | 213 |
| BtgZI | GCGATG | 1 cut(s) | 39 |
| BtsCI | GGATG | 1 cut(s) | 450 |
| BtsI | GCAGTG | 1 cut(s) | 228 |
| BtsIMutI | CAGTG | 2 cut(s) | 228, 310 |
| Cac8I | GCNNGC | 1 cut(s) | 10 |
| CciI | TCATGA | 1 cut(s) | 276 |
| CfoI | GCGC | 3 cut(s) | 70, 390, 420 |
| Csp6I | GTAC | 2 cut(s) | 131, 185 |
| CviAII | CATG | 2 cut(s) | 277, 329 |
| CviJI | RGCY | 6 cut(s) | 92, 143, 168, 218, 315, 470 |
| CviKI_1 | RGCY | 6 cut(s) | 92, 143, 168, 218, 315, 470 |
| CviQI | GTAC | 2 cut(s) | 131, 185 |
| DinI | GGCGCC | 1 cut(s) | 419 |
| DpnI | GATC | 1 cut(s) | 88 |
| DpnII | GATC | 1 cut(s) | 86 |
| Eco47III | AGCGCT | 1 cut(s) | 69 |
| EcoRII | CCWGG | 1 cut(s) | 92 |
| EgeI | GGCGCC | 1 cut(s) | 419 |
| EheI | GGCGCC | 1 cut(s) | 419 |
| FaeI | CATG | 2 cut(s) | 280, 332 |
| FaiI | YATR | 3 cut(s) | 278, 318, 330 |
| FatI | CATG | 2 cut(s) | 276, 328 |
| Fnu4HI | GCNGC | 2 cut(s) | 144, 219 |
| FokI | GGATG | 1 cut(s) | 437 |
| Fsp4HI | GCNGC | 2 cut(s) | 144, 219 |
| GlaI | GCGC | 3 cut(s) | 69, 389, 419 |
| GluI | GCNGC | 2 cut(s) | 144, 219 |
| HaeII | RGCGCY | 3 cut(s) | 71, 391, 421 |
| HapII | CCGG | 1 cut(s) | 455 |
| HhaI | GCGC | 3 cut(s) | 70, 390, 420 |
| Hin1I | GRCGYC | 1 cut(s) | 418 |
| Hin1II | CATG | 2 cut(s) | 280, 332 |
| Hin6I | GCGC | 3 cut(s) | 68, 388, 418 |
| HinP1I | GCGC | 3 cut(s) | 68, 388, 418 |
| HinfI | GANTC | 5 cut(s) | 97, 123, 199, 235, 433 |
| HpaII | CCGG | 1 cut(s) | 455 |
| HphI | GGTGA | 2 cut(s) | 172, 356 |
| Hpy166II | GTNNAC | 1 cut(s) | 163 |
| Hpy188I | TCNGA | 3 cut(s) | 28, 86, 105 |
| Hpy188III | TCNNGA | 3 cut(s) | 203, 269, 277 |
| Hpy8I | GTNNAC | 1 cut(s) | 163 |
| Hpy99I | CGWCG | 1 cut(s) | 296 |
| HpyAV | CCTTC | 2 cut(s) | 133, 241 |
| HpyCH4III | ACNGT | 2 cut(s) | 176, 305 |
| HpyCH4IV | ACGT | 1 cut(s) | 79 |
| HpyCH4V | TGCA | 3 cut(s) | 155, 221, 445 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 152, 409 |
| HpySE526I | ACGT | 1 cut(s) | 79 |
| Hsp92I | GRCGYC | 1 cut(s) | 418 |
| Hsp92II | CATG | 2 cut(s) | 280, 332 |
| HspAI | GCGC | 3 cut(s) | 68, 388, 418 |
| KasI | GGCGCC | 1 cut(s) | 417 |
| Kzo9I | GATC | 1 cut(s) | 86 |
| LmnI | GCTCC | 2 cut(s) | 259, 385 |
| LpnPI | CCDG | 7 cut(s) | 79, 106, 188, 206, 224, 254, 468 |
| Lsp1109I | GCAGC | 2 cut(s) | 130, 205 |
| LweI | GCATC | 2 cut(s) | 62, 377 |
| MaeII | ACGT | 1 cut(s) | 79 |
| MaeIII | GTNAC | 2 cut(s) | 305, 320 |
| MalI | GATC | 1 cut(s) | 88 |
| MboI | GATC | 1 cut(s) | 86 |
| MboII | GAAGA | 6 cut(s) | 118, 218, 244, 368, 374, 470 |
| MluCI | AATT | 3 cut(s) | 13, 263, 462 |
| Mly113I | GGCGCC | 1 cut(s) | 418 |
| MlyI | GAGTC | 2 cut(s) | 208, 442 |
| MnlI | CCTC | 4 cut(s) | 219, 273, 346, 376 |
| MslI | CAYNNNNRTG | 2 cut(s) | 333, 373 |
| MspI | CCGG | 1 cut(s) | 455 |
| MspR9I | CCNGG | 2 cut(s) | 94, 455 |
| MvaI | CCWGG | 1 cut(s) | 94 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 152, 409 |
| NarI | GGCGCC | 1 cut(s) | 418 |
| NciI | CCSGG | 1 cut(s) | 455 |
| NdeII | GATC | 1 cut(s) | 86 |
| NlaIII | CATG | 2 cut(s) | 280, 332 |
| NlaIV | GGNNCC | 1 cut(s) | 419 |
| NmuCI | GTSAC | 1 cut(s) | 305 |
| PagI | TCATGA | 1 cut(s) | 276 |
| PfeI | GAWTC | 3 cut(s) | 97, 123, 235 |
| PfoI | TCCNGGA | 1 cut(s) | 453 |
| PkrI | GCNGC | 2 cut(s) | 145, 220 |
| PleI | GAGTC | 2 cut(s) | 207, 441 |
| PluTI | GGCGCC | 1 cut(s) | 421 |
| PpsI | GAGTC | 2 cut(s) | 207, 441 |
| Psp6I | CCWGG | 1 cut(s) | 92 |
| PspGI | CCWGG | 1 cut(s) | 92 |
| PspN4I | GGNNCC | 1 cut(s) | 419 |
| PstI | CTGCAG | 1 cut(s) | 223 |
| RsaI | GTAC | 2 cut(s) | 132, 186 |
| RsaNI | GTAC | 2 cut(s) | 131, 185 |
| RseI | CAYNNNNRTG | 2 cut(s) | 333, 373 |
| SatI | GCNGC | 2 cut(s) | 144, 219 |
| Sau3AI | GATC | 1 cut(s) | 86 |
| SchI | GAGTC | 2 cut(s) | 208, 442 |
| ScrFI | CCNGG | 2 cut(s) | 94, 455 |
| SetI | ASST | 4 cut(s) | 82, 162, 230, 252 |
| SfaNI | GCATC | 2 cut(s) | 62, 377 |
| SfcI | CTRYAG | 1 cut(s) | 219 |
| SfoI | GGCGCC | 1 cut(s) | 419 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 333, 373 |
| Sse9I | AATT | 3 cut(s) | 13, 263, 462 |
| SsiI | CCGC | 1 cut(s) | 403 |
| SspDI | GGCGCC | 1 cut(s) | 417 |
| StyD4I | CCNGG | 2 cut(s) | 92, 453 |
| TaaI | ACNGT | 2 cut(s) | 176, 305 |
| TaiI | ACGT | 1 cut(s) | 82 |
| TaqI | TCGA | 2 cut(s) | 137, 197 |
| TasI | AATT | 3 cut(s) | 13, 263, 462 |
| TatI | WGTACW | 2 cut(s) | 130, 184 |
| TfiI | GAWTC | 3 cut(s) | 97, 123, 235 |
| TscAI | CASTG | 2 cut(s) | 228, 310 |
| TseFI | GTSAC | 1 cut(s) | 305 |
| TseI | GCWGC | 2 cut(s) | 143, 218 |
| Tsp45I | GTSAC | 1 cut(s) | 305 |
| TspDTI | ATGAA | 3 cut(s) | 6, 89, 375 |
| TspRI | CASTG | 2 cut(s) | 228, 310 |
| XapI | RAATTY | 1 cut(s) | 462 |