FvH4_2g21240

Belongs to the peptidase S10 family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
17651579 .. 17652919
1341 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g21240.t1

Sequence Viewer

Length: 1341 bp
ATGGAGTCAACAACAGTCGTCTGTTTCTTCCTCCTCTTCTTCTTCATCCCCAATACCATCACTGCCTCCCCACCACTTCTCTTCCCCAAACAAGCCCTCCCCACCAAGTCAGGCTACCTCCCAGTCAACCCCACCACATCCTCTGCCATATTCTACACCTTCTATGAAGCCCACAACCCAACTTCCCCTCTCTCCCAAACTCCTCTCCTCATTTGGCTCCAGGGCGGTCCCGGTTGCTCCTCCATGATCGGCAACTTCTTCGAGCTCGGTCCCTGGCGTGTCAATTCCCACAAACACCCCTCTGATCCCATCTCTCTCCAACCCAACTCTGCTTCCTGGAACAACATCTTCGGCTTGGTTTTTCTCGACAATCCCATCGGAACAGGGTTCAGTGTTGCTTCCTCACCCGAAGAGATTCCTAGCAACCAGCTTGACGTTGCACGTGACCTGTTCGCTGCGATTACCGAGTTCATCGAGCTTGATCACGTGTTTAAGTCGAGGCCTGTGTACATAACCGGTGAGAGCTATGCAGGTAAGTACATTCCGGCAATTGGGTACTACATTTTGCAGAGGAACATCGATGGGTCTGATCGGCGTGTGAACTTAGCTGGGGTTGCTATAGGAAATGGGGAGACAGACCCGGTGATACAAGTCAAAACTCATGCTGCGAGTGCTTACTTTTCGGGTTTGATTAATGAGAGGCAGAGGAGGGAGCTGGAGGAGCTTCAATTTGAGGCAGTGGAGTTGTCTAAAGCTGCGAAATGGAGCGAGGCGAAAAAAGCAAGAAGTCGAGTGTTGGATAGGTTGCAAGACATGACAGGGTTGCCTACTTTGTATGATATAAGAAAGAATGCTAGCTACGAGACGCATTTGGTTGGGGAGTTGTTGAGGAATGAGGAGGTGAGGAAGGCTTTGGGGGTGTCGAACGAGTCCAGGGCTTTCGAGGAATGTAGTCGTTTGGTGGGGGAGGTGTTGGGTGAGGATATGATGAAGAGTGTCAAGTACATGGTGGAGGAGTTGGTGAGGAAGAGCAAGGTGTTGTTGTACCAAGGGCAGTTTGATATGAGATGCGGCGTGGTTGCGAATGAGGCTTGGGTGAAGACCATGAAATGGGAAGGGGTGGAGAGATTTATGTCGACGGATAGGAGAGTTTGGAGATTGGGAGGAGAGGTTGCTGGTTATGTGCAGAAATGGGGGAGTCTGAGCTTTGTTTTGGTCTCAGGGGCTGGTCATCTTGTGCCTGCTGACCAGCCATTGAGAGCTCAAGCAATGATTCAAGACTGGGTATTGGGCAAAGGGTTATTTGCCAATGTGGAAGAGGATAACCTGTCATCAATTTGA

Protein Analysis

447

Amino Acids

49.77

Weight (kDa)

5.78

Isoelectric Point (pI)

46.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 33 - 430 4.8e-104 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 521
AccB7I CCANNNNNTGG 1 cut(s) 1110
AccI GTMKAC 1 cut(s) 1136
AciI CCGC 2 cut(s) 225, 1071
AclWI GGATC 1 cut(s) 299
AcvI CACGTG 2 cut(s) 443, 487
AfaI GTAC 5 cut(s) 509, 539, 557, 1004, 1046
AfiI CCNNNNNNNGG 2 cut(s) 551, 1110
AflIII ACRYGT 1 cut(s) 486
AgeI ACCGGT 1 cut(s) 515
AgsI TTSAA 2 cut(s) 728, 1277
AjnI CCWGG 4 cut(s) 219, 272, 335, 932
Alw21I GWGCWC 2 cut(s) 267, 1264
Alw26I GTCTC 3 cut(s) 626, 857, 1222
AlwI GGATC 1 cut(s) 299
AlwNI CAGNNNCTG 1 cut(s) 1226
AoxI GGCC 1 cut(s) 500
ApeKI GCWGC 3 cut(s) 455, 665, 755
AseI ATTAAT 1 cut(s) 693
AsiGI ACCGGT 1 cut(s) 515
Asp700I GAANNNNTTC 1 cut(s) 414
AspS9I GGNCC 2 cut(s) 227, 269
AsuC2I CCSGG 2 cut(s) 231, 641
AsuHPI GGTGA 7 cut(s) 396, 530, 655, 913, 989, 1033, 1108
AsuNHI GCTAGC 1 cut(s) 854
AvaII GGWCC 2 cut(s) 227, 269
BanII GRGCYC 2 cut(s) 267, 1264
BbrPI CACGTG 2 cut(s) 443, 487
BbsI GAAGAC 1 cut(s) 1106
Bbv12I GWGCWC 2 cut(s) 267, 1264
BbvI GCAGC 3 cut(s) 442, 652, 742
BccI CCATC 4 cut(s) 65, 317, 383, 575
BcgI CGANNNNNNTGC 2 cut(s) 241, 275
BciT130I CCWGG 4 cut(s) 221, 274, 337, 934
BclI TGATCA 1 cut(s) 481
BcnI CCSGG 2 cut(s) 231, 641
BcoDI GTCTC 3 cut(s) 626, 857, 1222
BfaI CTAG 2 cut(s) 420, 855
BfmI CTRYAG 1 cut(s) 618
BfuAI ACCTGC 1 cut(s) 521
BisI GCNGC 4 cut(s) 456, 666, 756, 1072
BlsI GCNGC 4 cut(s) 457, 667, 757, 1073
Bme1390I CCNGG 6 cut(s) 221, 231, 274, 337, 641, 934
Bme18I GGWCC 2 cut(s) 227, 269
BmgT120I GGNCC 2 cut(s) 227, 269
BmiI GGNNCC 3 cut(s) 218, 229, 271
BmrFI CCNGG 6 cut(s) 221, 231, 274, 337, 641, 934
BmrI ACTGGG 2 cut(s) 116, 1291
BmsI GCATC 1 cut(s) 1058
BmtI GCTAGC 1 cut(s) 858
BmuI ACTGGG 2 cut(s) 116, 1291
BpiI GAAGAC 1 cut(s) 1106
BpmI CTGGAG 2 cut(s) 203, 737
BpuEI CTTGAG 1 cut(s) 1248
BpuMI CCSGG 2 cut(s) 231, 641
Bsa29I ATCGAT 1 cut(s) 579
BsaAI YACGTR 2 cut(s) 443, 487
BsaI GGTCTC 1 cut(s) 1222
BsaJI CCNNGG 4 cut(s) 220, 272, 933, 1048
BsaWI WCCGGW 1 cut(s) 515
BsaXI ACNNNNNCTCC 4 cut(s) 81, 111, 1155, 1185
Bsc4I CCNNNNNNNGG 2 cut(s) 551, 1110
Bse118I RCCGGY 1 cut(s) 515
Bse1I ACTGG 2 cut(s) 122, 1286
Bse3DI GCAATG 1 cut(s) 1275
BseBI CCWGG 4 cut(s) 221, 274, 337, 934
BseCI ATCGAT 1 cut(s) 579
BseDI CCNNGG 4 cut(s) 220, 272, 933, 1048
BseGI GGATG 2 cut(s) 45, 137
BseLI CCNNNNNNNGG 2 cut(s) 551, 1110
BseMI GCAATG 1 cut(s) 1275
BseMII CTCAG 2 cut(s) 1193, 1233
BseNI ACTGG 2 cut(s) 122, 1286
BseRI GAGGAG 9 cut(s) 23, 192, 197, 229, 721, 734, 911, 1028, 1179
BseXI GCAGC 3 cut(s) 442, 652, 742
BseYI CCCAGC 1 cut(s) 608
BsgI GTGCAG 1 cut(s) 1205
BshFI GGCC 1 cut(s) 502
BshTI ACCGGT 1 cut(s) 515
BshVI ATCGAT 1 cut(s) 579
BsiHKAI GWGCWC 2 cut(s) 267, 1264
BsiSI CCGG 4 cut(s) 231, 516, 545, 641
BslFI GGGAC 2 cut(s) 213, 255
BslI CCNNNNNNNGG 2 cut(s) 551, 1110
BsmAI GTCTC 3 cut(s) 626, 857, 1222
BsmBI CGTCTC 1 cut(s) 857
BsmFI GGGAC 2 cut(s) 213, 255
BsmI GAATGC 1 cut(s) 856
BsnI GGCC 1 cut(s) 502
Bso31I GGTCTC 1 cut(s) 1222
Bsp1286I GDGCHC 2 cut(s) 267, 1264
Bsp1407I TGTACA 1 cut(s) 507
Bsp143I GATC 4 cut(s) 246, 304, 481, 589
BspACI CCGC 2 cut(s) 225, 1071
BspANI GGCC 1 cut(s) 502
BspCNI CTCAG 2 cut(s) 1194, 1232
BspDI ATCGAT 1 cut(s) 579
BspLI GGNNCC 3 cut(s) 218, 229, 271
BspMI ACCTGC 1 cut(s) 521
BspOI GCTAGC 1 cut(s) 858
BspPI GGATC 1 cut(s) 299
BspQI GCTCTTC 1 cut(s) 1022
BspTNI GGTCTC 1 cut(s) 1222
BsrDI GCAATG 1 cut(s) 1275
BsrFI RCCGGY 1 cut(s) 515
BsrGI TGTACA 1 cut(s) 507
BsrI ACTGG 2 cut(s) 122, 1286
BssAI RCCGGY 1 cut(s) 515
BssECI CCNNGG 4 cut(s) 220, 272, 933, 1048
BssMI GATC 4 cut(s) 246, 304, 481, 589
BssT1I CCWWGG 1 cut(s) 1048
Bst2UI CCWGG 4 cut(s) 221, 274, 337, 934
Bst4CI ACNGT 1 cut(s) 16
Bst6I CTCTTC 6 cut(s) 41, 86, 405, 986, 1022, 1311
BstAUI TGTACA 1 cut(s) 507
BstBAI YACGTR 2 cut(s) 443, 487
BstC8I GCNNGC 2 cut(s) 856, 1242
BstDEI CTNAG 3 cut(s) 604, 1202, 1219
BstF5I GGATG 2 cut(s) 45, 137
BstKTI GATC 4 cut(s) 249, 307, 484, 592
BstMAI GTCTC 3 cut(s) 626, 857, 1222
BstMBI GATC 4 cut(s) 246, 304, 481, 589
BstMWI GCNNNNNNNGC 5 cut(s) 614, 671, 721, 779, 1088
BstNI CCWGG 4 cut(s) 221, 274, 337, 934
BstSCI CCNGG 6 cut(s) 219, 229, 272, 335, 639, 932
BstSFI CTRYAG 1 cut(s) 618
BstV1I GCAGC 3 cut(s) 442, 652, 742
BstV2I GAAGAC 1 cut(s) 1106
Bsu15I ATCGAT 1 cut(s) 579
BsuRI GGCC 1 cut(s) 502
BsuTUI ATCGAT 1 cut(s) 579
BtsCI GGATG 2 cut(s) 45, 137
BtsI GCAGTG 2 cut(s) 60, 744
BtsIMutI CAGTG 3 cut(s) 60, 397, 744
BveI ACCTGC 1 cut(s) 521
Cac8I GCNNGC 2 cut(s) 856, 1242
CaiI CAGNNNCTG 1 cut(s) 1226
Cfr10I RCCGGY 1 cut(s) 515
Cfr13I GGNCC 2 cut(s) 227, 269
ClaI ATCGAT 1 cut(s) 579
CseI GACGC 1 cut(s) 874
Csp6I GTAC 5 cut(s) 508, 538, 556, 1003, 1045
CspAI ACCGGT 1 cut(s) 515
CviAII CATG 5 cut(s) 244, 662, 814, 1006, 1105
CviQI GTAC 5 cut(s) 508, 538, 556, 1003, 1045
DdeI CTNAG 3 cut(s) 604, 1202, 1219
DpnI GATC 4 cut(s) 248, 306, 483, 591
DpnII GATC 4 cut(s) 246, 304, 481, 589
Eam1104I CTCTTC 6 cut(s) 41, 86, 405, 986, 1022, 1311
EarI CTCTTC 6 cut(s) 41, 86, 405, 986, 1022, 1311
Ecl136II GAGCTC 2 cut(s) 265, 1262
Eco130I CCWWGG 1 cut(s) 1048
Eco147I AGGCCT 1 cut(s) 502
Eco24I GRGCYC 2 cut(s) 267, 1264
Eco31I GGTCTC 1 cut(s) 1222
Eco47I GGWCC 2 cut(s) 227, 269
Eco53kI GAGCTC 2 cut(s) 265, 1262
Eco72I CACGTG 2 cut(s) 443, 487
EcoICRI GAGCTC 2 cut(s) 265, 1262
EcoRII CCWGG 4 cut(s) 219, 272, 335, 932
EcoT14I CCWWGG 1 cut(s) 1048
EcoT38I GRGCYC 2 cut(s) 267, 1264
ErhI CCWWGG 1 cut(s) 1048
Esp3I CGTCTC 1 cut(s) 857
FaeI CATG 5 cut(s) 247, 665, 817, 1009, 1108
FaqI GGGAC 2 cut(s) 213, 255
FatI CATG 5 cut(s) 243, 661, 813, 1005, 1104
FbaI TGATCA 1 cut(s) 481
FblI GTMKAC 1 cut(s) 1136
Fnu4HI GCNGC 4 cut(s) 456, 666, 756, 1072
FokI GGATG 2 cut(s) 32, 124
FriOI GRGCYC 2 cut(s) 267, 1264
Fsp4HI GCNGC 4 cut(s) 456, 666, 756, 1072
FspBI CTAG 2 cut(s) 420, 855
GluI GCNGC 4 cut(s) 456, 666, 756, 1072
GsaI CCCAGC 1 cut(s) 612
GsuI CTGGAG 2 cut(s) 203, 737
HaeIII GGCC 1 cut(s) 502
HapII CCGG 4 cut(s) 231, 516, 545, 641
HgaI GACGC 1 cut(s) 874
Hin1II CATG 5 cut(s) 247, 665, 817, 1009, 1108
HincII GTYRAC 3 cut(s) 9, 127, 1137
HindII GTYRAC 3 cut(s) 9, 127, 1137
HinfI GANTC 5 cut(s) 5, 415, 929, 1198, 1273
HpaII CCGG 4 cut(s) 231, 516, 545, 641
HphI GGTGA 7 cut(s) 396, 530, 655, 913, 989, 1033, 1108
Hpy166II GTNNAC 5 cut(s) 9, 127, 508, 601, 1137
Hpy188I TCNGA 4 cut(s) 304, 380, 589, 1203
Hpy188III TCNNGA 2 cut(s) 365, 1277
Hpy8I GTNNAC 5 cut(s) 9, 127, 508, 601, 1137
Hpy99I CGWCG 1 cut(s) 1141
HpyAV CCTTC 3 cut(s) 169, 901, 1109
HpyCH4III ACNGT 1 cut(s) 16
HpyCH4IV ACGT 3 cut(s) 435, 442, 486
HpyCH4V TGCA 5 cut(s) 440, 530, 568, 808, 1186
HpyF10VI GCNNNNNNNGC 5 cut(s) 614, 671, 721, 779, 1088
HpyF3I CTNAG 3 cut(s) 604, 1202, 1219
HpySE526I ACGT 3 cut(s) 435, 442, 486
Hsp92II CATG 5 cut(s) 247, 665, 817, 1009, 1108
Ksp22I TGATCA 1 cut(s) 481
Kzo9I GATC 4 cut(s) 246, 304, 481, 589
LguI GCTCTTC 1 cut(s) 1022
LmnI GCTCC 5 cut(s) 222, 242, 712, 721, 765
Lsp1109I GCAGC 3 cut(s) 442, 652, 742
LweI GCATC 1 cut(s) 1058
MaeI CTAG 2 cut(s) 420, 855
MaeII ACGT 3 cut(s) 435, 442, 486
MaeIII GTNAC 1 cut(s) 443
MalI GATC 4 cut(s) 248, 306, 483, 591
MboI GATC 4 cut(s) 246, 304, 481, 589
MfeI CAATTG 1 cut(s) 549
MhlI GDGCHC 2 cut(s) 267, 1264
MluCI AATT 4 cut(s) 283, 549, 728, 1335
MlyI GAGTC 3 cut(s) 14, 938, 1207
MmeI TCCRAC 2 cut(s) 343, 777
MroXI GAANNNNTTC 1 cut(s) 414
MseI TTAA 2 cut(s) 492, 693
MspI CCGG 4 cut(s) 231, 516, 545, 641
MspR9I CCNGG 6 cut(s) 221, 231, 274, 337, 641, 934
MunI CAATTG 1 cut(s) 549
Mva1269I GAATGC 1 cut(s) 856
MvaI CCWGG 4 cut(s) 221, 274, 337, 934
MwoI GCNNNNNNNGC 5 cut(s) 614, 671, 721, 779, 1088
NciI CCSGG 2 cut(s) 231, 641
NdeII GATC 4 cut(s) 246, 304, 481, 589
NheI GCTAGC 1 cut(s) 854
NlaIII CATG 5 cut(s) 247, 665, 817, 1009, 1108
NlaIV GGNNCC 3 cut(s) 218, 229, 271
NmuCI GTSAC 1 cut(s) 443
PceI AGGCCT 1 cut(s) 502
PciSI GCTCTTC 1 cut(s) 1022
PctI GAATGC 1 cut(s) 856
PdmI GAANNNNTTC 1 cut(s) 414
PfeI GAWTC 2 cut(s) 415, 1273
PflMI CCANNNNNTGG 1 cut(s) 1110
PfoI TCCNGGA 1 cut(s) 335
PinAI ACCGGT 1 cut(s) 515
PkrI GCNGC 4 cut(s) 457, 667, 757, 1073
PleI GAGTC 3 cut(s) 13, 937, 1206
PmaCI CACGTG 2 cut(s) 443, 487
PmlI CACGTG 2 cut(s) 443, 487
PpsI GAGTC 3 cut(s) 13, 937, 1206
Ppu21I YACGTR 2 cut(s) 443, 487
PshBI ATTAAT 1 cut(s) 693
Psp124BI GAGCTC 2 cut(s) 267, 1264
Psp6I CCWGG 4 cut(s) 219, 272, 335, 932
PspCI CACGTG 2 cut(s) 443, 487
PspFI CCCAGC 1 cut(s) 608
PspGI CCWGG 4 cut(s) 219, 272, 335, 932
PspN4I GGNNCC 3 cut(s) 218, 229, 271
PspPI GGNCC 2 cut(s) 227, 269
PstNI CAGNNNCTG 1 cut(s) 1226
RsaI GTAC 5 cut(s) 509, 539, 557, 1004, 1046
RsaNI GTAC 5 cut(s) 508, 538, 556, 1003, 1045
SacI GAGCTC 2 cut(s) 267, 1264
SalI GTCGAC 1 cut(s) 1135
SapI GCTCTTC 1 cut(s) 1022
SaqAI TTAA 2 cut(s) 492, 693
SatI GCNGC 4 cut(s) 456, 666, 756, 1072
Sau3AI GATC 4 cut(s) 246, 304, 481, 589
Sau96I GGNCC 2 cut(s) 227, 269
SchI GAGTC 3 cut(s) 14, 938, 1207
ScrFI CCNGG 6 cut(s) 221, 231, 274, 337, 641, 934
SduI GDGCHC 2 cut(s) 267, 1264
SfaNI GCATC 1 cut(s) 1058
SfcI CTRYAG 1 cut(s) 618
SinI GGWCC 2 cut(s) 227, 269
SmlI CTYRAG 1 cut(s) 1263
SmoI CTYRAG 1 cut(s) 1263
Sse9I AATT 4 cut(s) 283, 549, 728, 1335
SseBI AGGCCT 1 cut(s) 502
SsiI CCGC 2 cut(s) 225, 1071
SspMI CTAG 2 cut(s) 420, 855
SstI GAGCTC 2 cut(s) 267, 1264
StuI AGGCCT 1 cut(s) 502
StyD4I CCNGG 6 cut(s) 219, 229, 272, 335, 639, 932
StyI CCWWGG 1 cut(s) 1048
TaaI ACNGT 1 cut(s) 16
TaiI ACGT 3 cut(s) 438, 445, 489
TaqI TCGA 9 cut(s) 261, 366, 474, 497, 579, 790, 923, 942, 1136
TaqII GACCGA 1 cut(s) 257
TasI AATT 4 cut(s) 283, 549, 728, 1335
TatI WGTACW 3 cut(s) 507, 537, 1002
TauI GCSGC 1 cut(s) 1074
TfiI GAWTC 2 cut(s) 415, 1273
Tru1I TTAA 2 cut(s) 492, 693
Tru9I TTAA 2 cut(s) 492, 693
TscAI CASTG 3 cut(s) 67, 397, 744
TseFI GTSAC 1 cut(s) 443
TseI GCWGC 3 cut(s) 455, 665, 755
Tsp45I GTSAC 1 cut(s) 443
TspDTI ATGAA 5 cut(s) 34, 180, 460, 1004, 1121
TspGWI ACGGA 1 cut(s) 1154
TspRI CASTG 3 cut(s) 67, 397, 744
Van91I CCANNNNNTGG 1 cut(s) 1110
VpaK11BI GGWCC 2 cut(s) 227, 269
VspI ATTAAT 1 cut(s) 693
XmiI GTMKAC 1 cut(s) 1136
XmnI GAANNNNTTC 1 cut(s) 414
XspI CTAG 2 cut(s) 420, 855
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.