Rh6BG307400

Belongs to the peptidase S10 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Reverse (-)
53649472 .. 53668688
19217 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG307400.1

Sequence Viewer

Length: 1377 bp
ATGATGAGGCCTTCAAGGATACATGGAAACCATTACCAGGAGAAATACGCCATCTTAGTTGGTGATGGTGGGGGATTGTCACCTGGGAAGTTGAGGACTATGCTACTTGGGGTAGAGAAGAAGAGGAAAGAGCAGGAAGATTCTGAATCTACTTTCAATTTGAGATCTCACGCTTCTGAATTTGAACGAACTGCTCAGAACCCAACTTCACCTCTCTCCCAAACCCCACTCCTCATTTGGCTCCAGGGCGGCCCCGGCTGCTCCTCCATGGTCGGCAACTTCTTCGAGCTCGGTCCCTGGCGCGTTAATTTCCACAAACACCCCTCTGATCCCCTCACCTTGGAACGCAACTCTGGTTCCTGGAACCGCATCTTCGGCTTGGTTTTTCTCGACAATCCCATCGGAACCGGGTTCAGTATAGCTTCCACACCCGAAGAGATTCCGAGAAACCAGTTTGCGGTTGCACAACACCTGTTCGCTGCAATTACCGAGTTCATTGAGCTTGATCCTGTGTTTAGGTCGAGGCCTGTTTACATCACTGGGGAGAGCTATGCAGGCAAGTATATTCCGGCAATTGGGTACTACATTTTGCAGAGGAATATTGATGCTGAGAGTTCTGGGTCCGATCGGCATGTGAATTTAGCTGGGGTTGCTATAGGAAATGGGGAGACAGACCCGGTGATCCAAGTGAAAACTCATGCTGTAAATGCTTACTTTTCGGGTTTGATCAATGAGAGGCAGAAGAGGGAGGTAGAGGAGCTTCAATTTGAGGCAGTGGAGTTGTCTAGAGCTGGGAAATGGAGCGAGGCGAAAATTGCAAGAAGCAGAGTGTTGGATAGGTTGCAAGACATGACCGGGTTGCCCACTTTGTATGATATCAGAAGGAATGCTAGCTATGAAACGCATTTGGTTGGGAAGTTATTGAGGAATGAGGAGCTGAGGAAGGCTTTGGGGGTGTCGAATGAGTCCATAGTTTTCGAGGAATGTAGCCATTTGGTGGGGGAGGTATTGCATGAGGATATGATGAAGAGTGTGAAGTACATGGTGGAAGAGTTGGTGAGGAAGAGCAAGGTTTTGTTGTACCAGGGGCAGTTTGATATGAGATGCGGCGTGGTTGCGAATGAGGCTTGGGTGAAGACCATGAAATGGGAGGGGATAGAGAGGTTTCTGTCGGCGGATAGGAGAGTTTGGAGATTGGGTGGAGAGGTTGCTGGTTATGTTCAGAAATGGGGAAGTCTGAGCTTTGTTTTGGTCTCAGGAACTGGTCATCTTGTGCCTGCTGACCAGCCATTAAGAGCTCAAGCAATGATTGAAGATTGGGTTTTGGGTAAAGGGTTGTTTGCCAATGTGGAGGAGGATAACCTGTCATCAATATGA

Protein Analysis

458

Amino Acids

51.43

Weight (kDa)

6.22

Isoelectric Point (pI)

48.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 73 - 442 1.9e-93 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 997, 1146
AccII CGCG 1 cut(s) 303
AciI CCGC 5 cut(s) 249, 367, 458, 1107, 1175
AclWI GGATC 3 cut(s) 323, 500, 676
AcsI RAATTY 2 cut(s) 179, 637
AfaI GTAC 3 cut(s) 581, 1040, 1082
AfiI CCNNNNNNNGG 6 cut(s) 37, 340, 457, 575, 997, 1146
AgsI TTSAA 5 cut(s) 15, 157, 185, 764, 1313
AjnI CCWGG 6 cut(s) 36, 82, 243, 296, 359, 1083
Alw21I GWGCWC 2 cut(s) 291, 1300
Alw26I GTCTC 2 cut(s) 662, 1258
AlwI GGATC 3 cut(s) 323, 500, 676
AlwNI CAGNNNCTG 1 cut(s) 1262
AoxI GGCC 3 cut(s) 8, 250, 524
ApeKI GCWGC 2 cut(s) 258, 479
ApoI RAATTY 2 cut(s) 179, 637
Asp700I GAANNNNTTC 1 cut(s) 438
AspLEI GCGC 1 cut(s) 303
AspS9I GGNCC 3 cut(s) 251, 293, 621
AsuC2I CCSGG 4 cut(s) 255, 409, 677, 856
AsuHPI GGTGA 7 cut(s) 72, 74, 201, 328, 691, 1069, 1144
AsuNHI GCTAGC 1 cut(s) 890
AvaII GGWCC 2 cut(s) 293, 621
BanII GRGCYC 2 cut(s) 291, 1300
BarI GAAGNNNNNNTAC 2 cut(s) 744, 776
BbsI GAAGAC 1 cut(s) 1142
Bbv12I GWGCWC 2 cut(s) 291, 1300
BbvCI CCTCAGC 1 cut(s) 938
BbvI GCAGC 2 cut(s) 245, 466
BccI CCATC 3 cut(s) 59, 59, 407
BcgI CGANNNNNNTGC 2 cut(s) 265, 299
BciT130I CCWGG 6 cut(s) 38, 84, 245, 298, 361, 1085
BciVI GTATCC 1 cut(s) 12
BclI TGATCA 1 cut(s) 726
BcnI CCSGG 4 cut(s) 255, 409, 677, 856
BcoDI GTCTC 2 cut(s) 662, 1258
BfaI CTAG 2 cut(s) 786, 891
BfmI CTRYAG 1 cut(s) 654
BfuI GTATCC 1 cut(s) 12
BglII AGATCT 1 cut(s) 164
BisI GCNGC 4 cut(s) 250, 259, 480, 1108
BlsI GCNGC 4 cut(s) 251, 260, 481, 1109
Bme18I GGWCC 2 cut(s) 293, 621
BmgT120I GGNCC 3 cut(s) 251, 293, 621
BmiI GGNNCC 7 cut(s) 242, 253, 295, 358, 365, 406, 622
BmrI ACTGGG 1 cut(s) 549
BmsI GCATC 3 cut(s) 378, 595, 1094
BmtI GCTAGC 1 cut(s) 894
BmuI ACTGGG 1 cut(s) 549
BpiI GAAGAC 1 cut(s) 1142
BpmI CTGGAG 1 cut(s) 227
Bpu10I CCTNAGC 1 cut(s) 938
BpuEI CTTGAG 1 cut(s) 1284
BpuMI CCSGG 4 cut(s) 255, 409, 677, 856
BsaI GGTCTC 1 cut(s) 1258
BsaJI CCNNGG 7 cut(s) 83, 244, 253, 267, 296, 339, 1084
BsaXI ACNNNNNCTCC 2 cut(s) 1183, 1213
Bsc4I CCNNNNNNNGG 6 cut(s) 37, 340, 457, 575, 997, 1146
Bse1I ACTGG 3 cut(s) 451, 544, 1267
Bse3DI GCAATG 1 cut(s) 1311
BseBI CCWGG 6 cut(s) 38, 84, 245, 298, 361, 1085
BseDI CCNNGG 7 cut(s) 83, 244, 253, 267, 296, 339, 1084
BseLI CCNNNNNNNGG 6 cut(s) 37, 340, 457, 575, 997, 1146
BseMI GCAATG 1 cut(s) 1311
BseMII CTCAG 5 cut(s) 209, 600, 929, 1229, 1269
BseNI ACTGG 3 cut(s) 451, 544, 1267
BseRI GAGGAG 5 cut(s) 221, 253, 770, 947, 1367
BseXI GCAGC 2 cut(s) 245, 466
BseYI CCCAGC 2 cut(s) 644, 791
Bsh1236I CGCG 1 cut(s) 303
Bsh1285I CGRYCG 1 cut(s) 628
BshFI GGCC 3 cut(s) 10, 252, 526
BsiEI CGRYCG 1 cut(s) 628
BsiHKAI GWGCWC 2 cut(s) 291, 1300
BsiSI CCGG 5 cut(s) 255, 408, 569, 677, 855
BslFI GGGAC 1 cut(s) 279
BslI CCNNNNNNNGG 6 cut(s) 37, 340, 457, 575, 997, 1146
BsmAI GTCTC 2 cut(s) 662, 1258
BsmFI GGGAC 1 cut(s) 279
BsmI GAATGC 1 cut(s) 892
BsnI GGCC 3 cut(s) 10, 252, 526
Bso31I GGTCTC 1 cut(s) 1258
Bsp1286I GDGCHC 2 cut(s) 291, 1300
Bsp143I GATC 6 cut(s) 164, 328, 505, 625, 681, 726
Bsp19I CCATGG 1 cut(s) 267
BspACI CCGC 5 cut(s) 249, 367, 458, 1107, 1175
BspANI GGCC 3 cut(s) 10, 252, 526
BspCNI CTCAG 5 cut(s) 208, 601, 930, 1230, 1268
BspFNI CGCG 1 cut(s) 303
BspLI GGNNCC 7 cut(s) 242, 253, 295, 358, 365, 406, 622
BspOI GCTAGC 1 cut(s) 894
BspPI GGATC 3 cut(s) 323, 500, 676
BspQI GCTCTTC 1 cut(s) 1058
BspTNI GGTCTC 1 cut(s) 1258
BsrDI GCAATG 1 cut(s) 1311
BsrI ACTGG 3 cut(s) 451, 544, 1267
BssECI CCNNGG 7 cut(s) 83, 244, 253, 267, 296, 339, 1084
BssMI GATC 6 cut(s) 164, 328, 505, 625, 681, 726
BssT1I CCWWGG 2 cut(s) 267, 339
Bst2UI CCWGG 6 cut(s) 38, 84, 245, 298, 361, 1085
Bst6I CTCTTC 6 cut(s) 116, 429, 737, 1022, 1044, 1058
BstC8I GCNNGC 3 cut(s) 556, 892, 1278
BstDEI CTNAG 6 cut(s) 55, 195, 609, 938, 1238, 1255
BstDSI CCRYGG 1 cut(s) 267
BstFNI CGCG 1 cut(s) 303
BstHHI GCGC 1 cut(s) 303
BstKTI GATC 6 cut(s) 167, 331, 508, 628, 684, 729
BstMAI GTCTC 2 cut(s) 662, 1258
BstMBI GATC 6 cut(s) 164, 328, 505, 625, 681, 726
BstMCI CGRYCG 1 cut(s) 628
BstMWI GCNNNNNNNGC 8 cut(s) 255, 258, 375, 555, 650, 707, 815, 1124
BstNI CCWGG 6 cut(s) 38, 84, 245, 298, 361, 1085
BstNSI RCATGY 1 cut(s) 635
BstSFI CTRYAG 1 cut(s) 654
BstUI CGCG 1 cut(s) 303
BstV1I GCAGC 2 cut(s) 245, 466
BstV2I GAAGAC 1 cut(s) 1142
BstX2I RGATCY 1 cut(s) 164
BstYI RGATCY 1 cut(s) 164
BsuI GTATCC 1 cut(s) 12
BsuRI GGCC 3 cut(s) 10, 252, 526
BtgI CCRYGG 1 cut(s) 267
BtsI GCAGTG 1 cut(s) 780
BtsIMutI CAGTG 2 cut(s) 537, 780
Cac8I GCNNGC 3 cut(s) 556, 892, 1278
CaiI CAGNNNCTG 1 cut(s) 1262
CfoI GCGC 1 cut(s) 303
Cfr13I GGNCC 3 cut(s) 251, 293, 621
Csp6I GTAC 3 cut(s) 580, 1039, 1081
CviAII CATG 8 cut(s) 23, 268, 632, 698, 850, 1013, 1042, 1141
CviQI GTAC 3 cut(s) 580, 1039, 1081
DdeI CTNAG 6 cut(s) 55, 195, 609, 938, 1238, 1255
DpnI GATC 6 cut(s) 166, 330, 507, 627, 683, 728
DpnII GATC 6 cut(s) 164, 328, 505, 625, 681, 726
Eam1104I CTCTTC 6 cut(s) 116, 429, 737, 1022, 1044, 1058
EarI CTCTTC 6 cut(s) 116, 429, 737, 1022, 1044, 1058
EciI GGCGGA 1 cut(s) 1190
Ecl136II GAGCTC 2 cut(s) 289, 1298
Eco130I CCWWGG 2 cut(s) 267, 339
Eco147I AGGCCT 2 cut(s) 10, 526
Eco24I GRGCYC 2 cut(s) 291, 1300
Eco31I GGTCTC 1 cut(s) 1258
Eco32I GATATC 1 cut(s) 877
Eco47I GGWCC 2 cut(s) 293, 621
Eco53kI GAGCTC 2 cut(s) 289, 1298
EcoICRI GAGCTC 2 cut(s) 289, 1298
EcoRII CCWGG 6 cut(s) 36, 82, 243, 296, 359, 1083
EcoRV GATATC 1 cut(s) 877
EcoT14I CCWWGG 2 cut(s) 267, 339
EcoT38I GRGCYC 2 cut(s) 291, 1300
ErhI CCWWGG 2 cut(s) 267, 339
FaeI CATG 8 cut(s) 26, 271, 635, 701, 853, 1016, 1045, 1144
FaqI GGGAC 1 cut(s) 279
FatI CATG 8 cut(s) 22, 267, 631, 697, 849, 1012, 1041, 1140
FbaI TGATCA 1 cut(s) 726
Fnu4HI GCNGC 4 cut(s) 250, 259, 480, 1108
FriOI GRGCYC 2 cut(s) 291, 1300
Fsp4HI GCNGC 4 cut(s) 250, 259, 480, 1108
FspBI CTAG 2 cut(s) 786, 891
GlaI GCGC 1 cut(s) 302
GluI GCNGC 4 cut(s) 250, 259, 480, 1108
GsaI CCCAGC 2 cut(s) 648, 795
GsuI CTGGAG 1 cut(s) 227
HaeIII GGCC 3 cut(s) 10, 252, 526
HapII CCGG 5 cut(s) 255, 408, 569, 677, 855
HhaI GCGC 1 cut(s) 303
Hin1II CATG 8 cut(s) 26, 271, 635, 701, 853, 1016, 1045, 1144
Hin6I GCGC 1 cut(s) 301
HinP1I GCGC 1 cut(s) 301
HinfI GANTC 4 cut(s) 140, 146, 439, 965
HpaII CCGG 5 cut(s) 255, 408, 569, 677, 855
HphI GGTGA 7 cut(s) 72, 74, 201, 328, 691, 1069, 1144
Hpy166II GTNNAC 1 cut(s) 532
Hpy188III TCNNGA 3 cut(s) 389, 786, 1257
Hpy8I GTNNAC 1 cut(s) 532
HpyAV CCTTC 3 cut(s) 21, 876, 937
HpyCH4V TGCA 7 cut(s) 464, 482, 554, 592, 818, 844, 1012
HpyF10VI GCNNNNNNNGC 8 cut(s) 255, 258, 375, 555, 650, 707, 815, 1124
HpyF3I CTNAG 6 cut(s) 55, 195, 609, 938, 1238, 1255
Hsp92II CATG 8 cut(s) 26, 271, 635, 701, 853, 1016, 1045, 1144
HspAI GCGC 1 cut(s) 301
Ksp22I TGATCA 1 cut(s) 726
Kzo9I GATC 6 cut(s) 164, 328, 505, 625, 681, 726
LguI GCTCTTC 1 cut(s) 1058
LmnI GCTCC 5 cut(s) 246, 266, 757, 801, 934
Lsp1109I GCAGC 2 cut(s) 245, 466
LweI GCATC 3 cut(s) 378, 595, 1094
MaeI CTAG 2 cut(s) 786, 891
MaeIII GTNAC 1 cut(s) 78
MalI GATC 6 cut(s) 166, 330, 507, 627, 683, 728
MboI GATC 6 cut(s) 164, 328, 505, 625, 681, 726
MfeI CAATTG 1 cut(s) 573
MflI RGATCY 1 cut(s) 164
MhlI GDGCHC 2 cut(s) 291, 1300
MluCI AATT 8 cut(s) 157, 179, 307, 483, 573, 637, 764, 813
MlyI GAGTC 1 cut(s) 974
MmeI TCCRAC 1 cut(s) 813
MroXI GAANNNNTTC 1 cut(s) 438
MseI TTAA 2 cut(s) 306, 1292
MslI CAYNNNNRTG 1 cut(s) 1372
MspI CCGG 5 cut(s) 255, 408, 569, 677, 855
MunI CAATTG 1 cut(s) 573
Mva1269I GAATGC 1 cut(s) 892
MvaI CCWGG 6 cut(s) 38, 84, 245, 298, 361, 1085
MvnI CGCG 1 cut(s) 303
MwoI GCNNNNNNNGC 8 cut(s) 255, 258, 375, 555, 650, 707, 815, 1124
NciI CCSGG 4 cut(s) 255, 409, 677, 856
NcoI CCATGG 1 cut(s) 267
NdeII GATC 6 cut(s) 164, 328, 505, 625, 681, 726
NheI GCTAGC 1 cut(s) 890
NlaIII CATG 8 cut(s) 26, 271, 635, 701, 853, 1016, 1045, 1144
NlaIV GGNNCC 7 cut(s) 242, 253, 295, 358, 365, 406, 622
NmuCI GTSAC 1 cut(s) 78
NspI RCATGY 1 cut(s) 635
PceI AGGCCT 2 cut(s) 10, 526
PciSI GCTCTTC 1 cut(s) 1058
PctI GAATGC 1 cut(s) 892
PdmI GAANNNNTTC 1 cut(s) 438
PfeI GAWTC 3 cut(s) 140, 146, 439
PflMI CCANNNNNTGG 2 cut(s) 997, 1146
PfoI TCCNGGA 1 cut(s) 359
PkrI GCNGC 4 cut(s) 251, 260, 481, 1109
Ple19I CGATCG 1 cut(s) 628
PleI GAGTC 1 cut(s) 973
PpsI GAGTC 1 cut(s) 973
Psp124BI GAGCTC 2 cut(s) 291, 1300
Psp6I CCWGG 6 cut(s) 36, 82, 243, 296, 359, 1083
PspFI CCCAGC 2 cut(s) 644, 791
PspGI CCWGG 6 cut(s) 36, 82, 243, 296, 359, 1083
PspN4I GGNNCC 7 cut(s) 242, 253, 295, 358, 365, 406, 622
PspPI GGNCC 3 cut(s) 251, 293, 621
PstNI CAGNNNCTG 1 cut(s) 1262
PsuI RGATCY 1 cut(s) 164
PvuI CGATCG 1 cut(s) 628
RsaI GTAC 3 cut(s) 581, 1040, 1082
RsaNI GTAC 3 cut(s) 580, 1039, 1081
RseI CAYNNNNRTG 1 cut(s) 1372
SacI GAGCTC 2 cut(s) 291, 1300
SapI GCTCTTC 1 cut(s) 1058
SaqAI TTAA 2 cut(s) 306, 1292
SatI GCNGC 4 cut(s) 250, 259, 480, 1108
Sau3AI GATC 6 cut(s) 164, 328, 505, 625, 681, 726
Sau96I GGNCC 3 cut(s) 251, 293, 621
SchI GAGTC 1 cut(s) 974
SduI GDGCHC 2 cut(s) 291, 1300
SfaNI GCATC 3 cut(s) 378, 595, 1094
SfcI CTRYAG 1 cut(s) 654
SinI GGWCC 2 cut(s) 293, 621
SmiMI CAYNNNNRTG 1 cut(s) 1372
SmlI CTYRAG 1 cut(s) 1299
SmoI CTYRAG 1 cut(s) 1299
Sse9I AATT 8 cut(s) 157, 179, 307, 483, 573, 637, 764, 813
SseBI AGGCCT 2 cut(s) 10, 526
SsiI CCGC 5 cut(s) 249, 367, 458, 1107, 1175
SspI AATATT 1 cut(s) 601
SspMI CTAG 2 cut(s) 786, 891
SstI GAGCTC 2 cut(s) 291, 1300
StuI AGGCCT 2 cut(s) 10, 526
StyI CCWWGG 2 cut(s) 267, 339
TaqI TCGA 5 cut(s) 285, 390, 521, 959, 978
TaqII GACCGA 1 cut(s) 281
TasI AATT 8 cut(s) 157, 179, 307, 483, 573, 637, 764, 813
TatI WGTACW 1 cut(s) 1038
TauI GCSGC 2 cut(s) 252, 1110
TfiI GAWTC 3 cut(s) 140, 146, 439
Tru1I TTAA 2 cut(s) 306, 1292
Tru9I TTAA 2 cut(s) 306, 1292
TscAI CASTG 2 cut(s) 544, 780
TseFI GTSAC 1 cut(s) 78
TseI GCWGC 2 cut(s) 258, 479
Tsp45I GTSAC 1 cut(s) 78
TspDTI ATGAA 4 cut(s) 484, 912, 1040, 1157
TspRI CASTG 2 cut(s) 544, 780
Van91I CCANNNNNTGG 2 cut(s) 997, 1146
VpaK11BI GGWCC 2 cut(s) 293, 621
XapI RAATTY 2 cut(s) 179, 637
XbaI TCTAGA 1 cut(s) 785
XceI RCATGY 1 cut(s) 635
XcmI CCANNNNNNNNNTGG 1 cut(s) 234
XmnI GAANNNNTTC 1 cut(s) 438
XspI CTAG 2 cut(s) 786, 891
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.