Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0002772

Physical Location & Seq

Genomic Coordinates Reverse (-)

31014129 .. 31015478

Gene Structure 1350 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G325200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1350 bp

ATGGAGTCAACAAAGCTCCTCTTCTTCTTCTGCTTCCTCCACCTCATCACAGCTTCATCATCATCACAACCTCTGTTCCCCAAACAAGCTCATCCCACCAAATCAGGCTACCTCCCAGTCAAACCCACCACAGGCTCTGCAATTTTCTACACTTTCTATGAAGCTCAGAACCTCACAATCTCACCCGATCTCTCTCAAACCCCACTGCTCATTTGGCTCCAAGGCGGCCCTGGTTGCTCCTCCATGATCGGCAACTTCTTCGAGCTTGGCCCATGGCGTGTAAATTTTAACAAACACCCTTCTGAGCCCCTTGCTCTGGAACCCAATTCTGGTTCCTGGAACCGAATCTTTGGCCTGGTGTTTCTTGACAATCCAATTGGAACTGGATTCAGTATAGCTGCGAAGCCAGAAGAGATCCCAAGAGACCAGCTTTCAGTTGCCAGAGACCTCTTTGTTGCAATTACCAAGTTTATTGAGCTTGACCCTGTGTTTAAGTCACGGCCTCTTTACATAACTGGTGAGAGCTATGCAGGCAAGTATGTTCCGGCTATTGGATACTACATTTTGAAGAGGAATGCTGAGTTGGCAGCTGGGTCACAAGGTGTGAATTTACGTGGGGTTGCTATTGGGGATGGGCTCACAGACCCAGAGATTCAGGTGGCTACCCATGCTGTGAATGCTTACTTCTCTGGTTTGATCAATGAGAGGCAGAGCAGTGAGTTGGCGAAGCTTCAGGTGGAAGCAGTTGGGTTCACTAAAGCAGGCAATTGGAGTGAGGCCACAGATGCAAGAAACAGAGTCTTGAATTTGTTGCAAAACATGACTGGGTCGGCGACTTTGTATGATTACACAAAGAACGTTCCTTACAAAACCAGTTTGGTTGAGGATTTTTTGAGGCATGAGGAGGTGAAGAGGGCTTTGGGGGTTAATGGGTCGTTGGTTTTTGAGGAATGCAGTGTTTTGGTGGGGGATATTTTGAATGAAGATGTGATGAAGAGTGTGAAATACATGGTGGAATATTTGTTGAAGAAGAGCAAGGTCTTGTTGTACCAAGGGCAGTTTGATTTGAGAGACGGTGTGGTTTCCACTGAGGCTTGGGTCAAGACCATAAAATGGAAGGGGATTGACAAGTTTCTGTCAGCGGACCGGAAAGTTTGGAAGTTGGGTAGCGAGGTTGCTGGGTATGTTCAGAAATGGGGGAGCTTGAGCCATGTGTTGGTTTCAGGGGCTGGTCATCTTTTGCCTGCTGACCAGCCATTGAGAGCTCAAGCAATGATAGAAGATTGGGTTTTGGACAAAGGGTTGTTTGGCAATACGAGTGAAAATTTGTCATCAAATTTCGTTATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004180 GO:0004185 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0008238 GO:0009056 GO:0009057 GO:0009987 GO:0016787 GO:0017171 GO:0019538 GO:0030163 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0051603 GO:0070008 GO:0070011 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_S10

Protein Analysis

450

Amino Acids

49.66

Weight (kDa)

6.42

Isoelectric Point (pI)

36.3

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002772)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G15000
fragaria_vesca	FvH4_2g21150 FvH4_2g21240 FvH4_4g32480
malus_domestica	MD13G1025000.v1.1 MD16G1027500.v1.1
prunus_persica	Prupe.1G325200_v2.0.a1
pyrus_communis	pycom16g02330
rosa_chinensis	RchiOBHm_Chr4g0441341 RchiOBHm_Chr6g0287751 RchiOBHm_Chr6g0287771 RchiOBHm_Chr6g0287801
rosa_laevigata	RLG00000006100 RLG00000012469
rosa_multiflora	Rmu_sc0003335.1_g000006 Rmu_sc0003335.1_g000008 Rmu_sc0003877.1_g000008 Rmu_sc0003877.1_g000010 Rmu_sc0008122.1_g000001 Rmu_sc0012909.1_g000001
rosa_roxburghii	Rroxscaffold_5G00382230 Rroxscaffold_7G00181130 Rroxscaffold_7G00181230
rosa_rugosa	Rorug04G0332500 Rorug06G0191600
rosa_samantha	Rh4AG384500 Rh4BG398600 Rh4CG413700 Rh4DG391200 Rh6AG301600 Rh6BG307400 Rh6BG307500 Rh6CG315400 Rh6DG299300 Rh6DG299500 Rh6DG299800 Rh6DG300100
rosa_wichuraiana	Rw4G033190 Rw6G026050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	1113, 1216
AciI	CCGC	2 cut(s)	225, 1142
AclI	AACGTT	1 cut(s)	858
AclWI	GGATC	1 cut(s)	409
AcsI	RAATTY	5 cut(s)	283, 607, 805, 1324, 1336
AcuI	CTGAAG	1 cut(s)	716
AdeI	CACNNNGTG	1 cut(s)	602
AfaI	GTAC	1 cut(s)	1049
AfiI	CCNNNNNNNGG	6 cut(s)	131, 316, 329, 551, 1113, 1216
AgsI	TTSAA	4 cut(s)	568, 805, 979, 1027
AjnI	CCWGG	3 cut(s)	229, 335, 354
AjuI	GAANNNNNNNTTGG	4 cut(s)	566, 598, 902, 934
Alw21I	GWGCWC	1 cut(s)	1267
Alw26I	GTCTC	3 cut(s)	417, 438, 1065
AlwI	GGATC	1 cut(s)	409
AlwNI	CAGNNNCTG	2 cut(s)	137, 1229
AoxI	GGCC	5 cut(s)	226, 268, 352, 500, 777
ApeKI	GCWGC	2 cut(s)	398, 587
ApoI	RAATTY	5 cut(s)	283, 607, 805, 1324, 1336
AspS9I	GGNCC	3 cut(s)	227, 269, 1144
AsuHPI	GGTGA	3 cut(s)	174, 530, 919
AvaII	GGWCC	1 cut(s)	1144
BanII	GRGCYC	3 cut(s)	309, 639, 1267
Bbv12I	GWGCWC	1 cut(s)	1267
BbvI	GCAGC	2 cut(s)	385, 599
BccI	CCATC	1 cut(s)	626
BceAI	ACGGC	1 cut(s)	515
BcgI	CGANNNNNNTGC	2 cut(s)	241, 275
BciT130I	CCWGG	3 cut(s)	231, 337, 356
BciVI	GTATCC	1 cut(s)	548
BclI	TGATCA	1 cut(s)	696
BcoDI	GTCTC	3 cut(s)	417, 438, 1065
BfuI	GTATCC	1 cut(s)	548
BisI	GCNGC	3 cut(s)	226, 399, 588
BlsI	GCNGC	3 cut(s)	227, 400, 589
Bme1390I	CCNGG	3 cut(s)	231, 337, 356
Bme18I	GGWCC	1 cut(s)	1144
BmgT120I	GGNCC	3 cut(s)	227, 269, 1144
BmiI	GGNNCC	4 cut(s)	218, 321, 334, 341
BmrFI	CCNGG	3 cut(s)	231, 337, 356
BmrI	ACTGGG	2 cut(s)	110, 834
BmsI	GCATC	1 cut(s)	775
BmuI	ACTGGG	2 cut(s)	110, 834
BpuEI	CTTGAG	2 cut(s)	1225, 1251
BsaAI	YACGTR	1 cut(s)	614
BsaI	GGTCTC	2 cut(s)	417, 438
BsaJI	CCNNGG	4 cut(s)	220, 229, 272, 1051
BsaWI	WCCGGW	1 cut(s)	1146
Bsc4I	CCNNNNNNNGG	6 cut(s)	131, 316, 329, 551, 1113, 1216
Bse1I	ACTGG	5 cut(s)	116, 388, 520, 829, 873
Bse3DI	GCAATG	1 cut(s)	1278
BseBI	CCWGG	3 cut(s)	231, 337, 356
BseDI	CCNNGG	4 cut(s)	220, 229, 272, 1051
BseGI	GGATG	2 cut(s)	91, 637
BseLI	CCNNNNNNNGG	6 cut(s)	131, 316, 329, 551, 1113, 1216
BseMI	GCAATG	1 cut(s)	1278
BseMII	CTCAG	4 cut(s)	179, 294, 570, 1080
BseNI	ACTGG	5 cut(s)	116, 388, 520, 829, 873
BseRI	GAGGAG	3 cut(s)	8, 229, 917
BseXI	GCAGC	2 cut(s)	385, 599
BseYI	CCCAGC	2 cut(s)	590, 1178
BshFI	GGCC	5 cut(s)	228, 270, 354, 502, 779
BsiHKAI	GWGCWC	1 cut(s)	1267
BsiSI	CCGG	2 cut(s)	545, 1147
BslI	CCNNNNNNNGG	6 cut(s)	131, 316, 329, 551, 1113, 1216
BsmAI	GTCTC	3 cut(s)	417, 438, 1065
BsmBI	CGTCTC	1 cut(s)	1065
BsmI	GAATGC	3 cut(s)	580, 682, 956
BsnI	GGCC	5 cut(s)	228, 270, 354, 502, 779
Bso31I	GGTCTC	2 cut(s)	417, 438
Bsp1286I	GDGCHC	3 cut(s)	309, 639, 1267
Bsp143I	GATC	4 cut(s)	187, 246, 414, 696
Bsp19I	CCATGG	1 cut(s)	272
BspACI	CCGC	2 cut(s)	225, 1142
BspANI	GGCC	5 cut(s)	228, 270, 354, 502, 779
BspCNI	CTCAG	4 cut(s)	178, 295, 571, 1081
BspLI	GGNNCC	4 cut(s)	218, 321, 334, 341
BspPI	GGATC	1 cut(s)	409
BspQI	GCTCTTC	1 cut(s)	1025
BspTNI	GGTCTC	2 cut(s)	417, 438
BsrDI	GCAATG	1 cut(s)	1278
BsrI	ACTGG	5 cut(s)	116, 388, 520, 829, 873
BssECI	CCNNGG	4 cut(s)	220, 229, 272, 1051
BssMI	GATC	4 cut(s)	187, 246, 414, 696
BssT1I	CCWWGG	3 cut(s)	220, 272, 1051
Bst2UI	CCWGG	3 cut(s)	231, 337, 356
Bst4CI	ACNGT	1 cut(s)	1076
Bst6I	CTCTTC	6 cut(s)	26, 405, 563, 905, 989, 1025
BstBAI	YACGTR	1 cut(s)	614
BstC8I	GCNNGC	3 cut(s)	532, 763, 1245
BstDEI	CTNAG	4 cut(s)	165, 303, 579, 1089
BstDSI	CCRYGG	1 cut(s)	272
BstF5I	GGATG	2 cut(s)	91, 637
BstKTI	GATC	4 cut(s)	190, 249, 417, 699
BstMAI	GTCTC	3 cut(s)	417, 438, 1065
BstMBI	GATC	4 cut(s)	187, 246, 414, 696
BstMWI	GCNNNNNNNGC	7 cut(s)	214, 234, 531, 584, 668, 677, 785
BstNI	CCWGG	3 cut(s)	231, 337, 356
BstSCI	CCNGG	3 cut(s)	229, 335, 354
BstV1I	GCAGC	2 cut(s)	385, 599
BstX2I	RGATCY	1 cut(s)	414
BstYI	RGATCY	1 cut(s)	414
BsuI	GTATCC	1 cut(s)	548
BsuRI	GGCC	5 cut(s)	228, 270, 354, 502, 779
BtgI	CCRYGG	1 cut(s)	272
BtsCI	GGATG	2 cut(s)	91, 637
BtsI	GCAGTG	3 cut(s)	203, 721, 961
BtsIMutI	CAGTG	4 cut(s)	203, 721, 961, 1086
Cac8I	GCNNGC	3 cut(s)	532, 763, 1245
CaiI	CAGNNNCTG	2 cut(s)	137, 1229
Cfr13I	GGNCC	3 cut(s)	227, 269, 1144
CpoI	CGGWCCG	1 cut(s)	1144
Csp6I	GTAC	1 cut(s)	1048
CspI	CGGWCCG	1 cut(s)	1144
CviAII	CATG	7 cut(s)	244, 273, 668, 820, 899, 1009, 1211
CviQI	GTAC	1 cut(s)	1048
DdeI	CTNAG	4 cut(s)	165, 303, 579, 1089
DpnI	GATC	4 cut(s)	189, 248, 416, 698
DpnII	GATC	4 cut(s)	187, 246, 414, 696
DraIII	CACNNNGTG	1 cut(s)	602
Eam1104I	CTCTTC	6 cut(s)	26, 405, 563, 905, 989, 1025
EarI	CTCTTC	6 cut(s)	26, 405, 563, 905, 989, 1025
Ecl136II	GAGCTC	1 cut(s)	1265
Eco130I	CCWWGG	3 cut(s)	220, 272, 1051
Eco24I	GRGCYC	3 cut(s)	309, 639, 1267
Eco31I	GGTCTC	2 cut(s)	417, 438
Eco47I	GGWCC	1 cut(s)	1144
Eco53kI	GAGCTC	1 cut(s)	1265
Eco57I	CTGAAG	1 cut(s)	716
EcoICRI	GAGCTC	1 cut(s)	1265
EcoRII	CCWGG	3 cut(s)	229, 335, 354
EcoT14I	CCWWGG	3 cut(s)	220, 272, 1051
EcoT38I	GRGCYC	3 cut(s)	309, 639, 1267
ErhI	CCWWGG	3 cut(s)	220, 272, 1051
Esp3I	CGTCTC	1 cut(s)	1065
FaeI	CATG	7 cut(s)	247, 276, 671, 823, 902, 1012, 1214
FalI	AAGNNNNNCTT	1 cut(s)	37
FatI	CATG	7 cut(s)	243, 272, 667, 819, 898, 1008, 1210
FbaI	TGATCA	1 cut(s)	696
Fnu4HI	GCNGC	3 cut(s)	226, 399, 588
FokI	GGATG	2 cut(s)	78, 644
FriOI	GRGCYC	3 cut(s)	309, 639, 1267
Fsp4HI	GCNGC	3 cut(s)	226, 399, 588
GluI	GCNGC	3 cut(s)	226, 399, 588
GsaI	CCCAGC	2 cut(s)	594, 1182
HaeIII	GGCC	5 cut(s)	228, 270, 354, 502, 779
HapII	CCGG	2 cut(s)	545, 1147
Hin1II	CATG	7 cut(s)	247, 276, 671, 823, 902, 1012, 1214
HincII	GTYRAC	1 cut(s)	9
HindII	GTYRAC	1 cut(s)	9
HindIII	AAGCTT	1 cut(s)	728
HinfI	GANTC	5 cut(s)	5, 345, 387, 652, 798
HpaII	CCGG	2 cut(s)	545, 1147
HphI	GGTGA	3 cut(s)	174, 530, 919
Hpy166II	GTNNAC	2 cut(s)	9, 753
Hpy188I	TCNGA	3 cut(s)	168, 304, 1191
Hpy188III	TCNNGA	4 cut(s)	317, 365, 802, 1102
Hpy8I	GTNNAC	2 cut(s)	9, 753
HpyAV	CCTTC	2 cut(s)	309, 1111
HpyCH4III	ACNGT	1 cut(s)	1076
HpyCH4IV	ACGT	2 cut(s)	613, 858
HpyCH4V	TGCA	6 cut(s)	140, 458, 530, 788, 814, 954
HpyF10VI	GCNNNNNNNGC	7 cut(s)	214, 234, 531, 584, 668, 677, 785
HpyF3I	CTNAG	4 cut(s)	165, 303, 579, 1089
HpySE526I	ACGT	2 cut(s)	613, 858
Hsp92II	CATG	7 cut(s)	247, 276, 671, 823, 902, 1012, 1214
Ksp22I	TGATCA	1 cut(s)	696
Kzo9I	GATC	4 cut(s)	187, 246, 414, 696
LguI	GCTCTTC	1 cut(s)	1025
LmnI	GCTCC	4 cut(s)	21, 222, 242, 1200
Lsp1109I	GCAGC	2 cut(s)	385, 599
LweI	GCATC	1 cut(s)	775
MaeII	ACGT	2 cut(s)	613, 858
MaeIII	GTNAC	2 cut(s)	495, 594
MalI	GATC	4 cut(s)	189, 248, 416, 698
MboI	GATC	4 cut(s)	187, 246, 414, 696
MfeI	CAATTG	2 cut(s)	375, 766
MflI	RGATCY	1 cut(s)	414
MhlI	GDGCHC	3 cut(s)	309, 639, 1267
MlyI	GAGTC	2 cut(s)	14, 807
MseI	TTAA	3 cut(s)	288, 492, 927
MspA1I	CMGCKG	2 cut(s)	590, 1142
MspI	CCGG	2 cut(s)	545, 1147
MspR9I	CCNGG	3 cut(s)	231, 337, 356
MunI	CAATTG	2 cut(s)	375, 766
Mva1269I	GAATGC	3 cut(s)	580, 682, 956
MvaI	CCWGG	3 cut(s)	231, 337, 356
MwoI	GCNNNNNNNGC	7 cut(s)	214, 234, 531, 584, 668, 677, 785
NcoI	CCATGG	1 cut(s)	272
NdeII	GATC	4 cut(s)	187, 246, 414, 696
NlaIII	CATG	7 cut(s)	247, 276, 671, 823, 902, 1012, 1214
NlaIV	GGNNCC	4 cut(s)	218, 321, 334, 341
NmuCI	GTSAC	2 cut(s)	495, 594
PciSI	GCTCTTC	1 cut(s)	1025
PctI	GAATGC	3 cut(s)	580, 682, 956
PfeI	GAWTC	3 cut(s)	345, 387, 652
PflFI	GACNNNGTC	1 cut(s)	826
PflMI	CCANNNNNTGG	2 cut(s)	1113, 1216
PfoI	TCCNGGA	1 cut(s)	335
PkrI	GCNGC	3 cut(s)	227, 400, 589
PleI	GAGTC	2 cut(s)	13, 806
PpsI	GAGTC	2 cut(s)	13, 806
Ppu21I	YACGTR	1 cut(s)	614
Psp124BI	GAGCTC	1 cut(s)	1267
Psp1406I	AACGTT	1 cut(s)	858
Psp6I	CCWGG	3 cut(s)	229, 335, 354
PspFI	CCCAGC	2 cut(s)	590, 1178
PspGI	CCWGG	3 cut(s)	229, 335, 354
PspN4I	GGNNCC	4 cut(s)	218, 321, 334, 341
PspPI	GGNCC	3 cut(s)	227, 269, 1144
PsrI	GAACNNNNNNTAC	2 cut(s)	848, 880
PstNI	CAGNNNCTG	2 cut(s)	137, 1229
PsuI	RGATCY	1 cut(s)	414
PsyI	GACNNNGTC	1 cut(s)	826
PvuII	CAGCTG	1 cut(s)	590
RsaI	GTAC	1 cut(s)	1049
RsaNI	GTAC	1 cut(s)	1048
Rsr2I	CGGWCCG	1 cut(s)	1144
RsrII	CGGWCCG	1 cut(s)	1144
SacI	GAGCTC	1 cut(s)	1267
SapI	GCTCTTC	1 cut(s)	1025
SaqAI	TTAA	3 cut(s)	288, 492, 927
SatI	GCNGC	3 cut(s)	226, 399, 588
Sau3AI	GATC	4 cut(s)	187, 246, 414, 696
Sau96I	GGNCC	3 cut(s)	227, 269, 1144
SchI	GAGTC	2 cut(s)	14, 807
ScrFI	CCNGG	3 cut(s)	231, 337, 356
SduI	GDGCHC	3 cut(s)	309, 639, 1267
SfaNI	GCATC	1 cut(s)	775
SinI	GGWCC	1 cut(s)	1144
SmlI	CTYRAG	2 cut(s)	1204, 1266
SmoI	CTYRAG	2 cut(s)	1204, 1266
SsiI	CCGC	2 cut(s)	225, 1142
SspI	AATATT	1 cut(s)	1019
SstI	GAGCTC	1 cut(s)	1267
StyD4I	CCNGG	3 cut(s)	229, 335, 354
StyI	CCWWGG	3 cut(s)	220, 272, 1051
TaaI	ACNGT	1 cut(s)	1076
TaiI	ACGT	2 cut(s)	616, 861
TaqI	TCGA	1 cut(s)	261
TauI	GCSGC	1 cut(s)	228
TfiI	GAWTC	3 cut(s)	345, 387, 652
Tru1I	TTAA	3 cut(s)	288, 492, 927
Tru9I	TTAA	3 cut(s)	288, 492, 927
TscAI	CASTG	4 cut(s)	210, 721, 961, 1093
TseFI	GTSAC	2 cut(s)	495, 594
TseI	GCWGC	2 cut(s)	398, 587
Tsp45I	GTSAC	2 cut(s)	495, 594
TspDTI	ATGAA	4 cut(s)	45, 174, 996, 1007
TspRI	CASTG	4 cut(s)	210, 721, 961, 1093
Tth111I	GACNNNGTC	1 cut(s)	826
Van91I	CCANNNNNTGG	2 cut(s)	1113, 1216
VpaK11BI	GGWCC	1 cut(s)	1144
XapI	RAATTY	5 cut(s)	283, 607, 805, 1324, 1336
XcmI	CCANNNNNNNNNTGG	2 cut(s)	210, 227

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.