Rmu_sc0012909.1_g000001

Belongs to the peptidase S10 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0012909.1
Physical Location & Seq
Forward (+)
1 .. 14905
14905 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0012909.1_g000001.1.cds

Sequence Viewer

Length: 1696 bp
taaaccaacctccgctaaaaccgggcagtttggtccagtcttgaatcacctagatgaaatggacggcctgattcgctggttccaacgcatcgcaacttctacttcttcatcctcccccgatcaccatgtacacgatgaccagtctccgtcggcggaggagcaggagttgacgatcacggtggacctggacatgagtggcctgaagccgatcaaggtgccgataagagccaatcatagactcgcctccatggaccatcataagaatatgcttgacaacgagtttttcaccgaatacggtgaggcaagtcaatatgagatacaagaagtgattggcaaaggcagctatggtgttgttgcgtctgcagttgatactcacaccggtgagaaggtggctattaagaaaatcaatgatgtctttgagcatgtatctgatgcgactcgcattttaagagaaattaagctccttcggctactgcaccaccctgatattgtggacataaagcatataatgctacccccttgtagacgagagttcaaggatatatatgttgtatttgagttgatggaatctgaccttcaccaagttataaaggcaaatgatgatctcactcctgagcattatcaatttttcctgtaccagcttcttcgagctctcaagtatatacatacaggaaatgttttccatcgagatttaaagccaaaaaatatacttgctaatgcagactgcaaactgaaaatctgtgactttggtcttgctcgtccagcatttagcgatgccccatctactgtcttttggactgactatgtggcaactcgatggtaccgtgctcccgaactttgtggttcctttttctccaagtcgaggcgtatttacattactggggagagctatgcagggaagtatgttccggctattggttactacattttgaagaggaatgccgagttaagtgagtctaagcgtgtgaatttgggcggtgttgctatcggagatgggctaacagacccggtgattcaggtggctactcatgctgcgaatacatacttctctggtttgatcaatgagaggcagaagagtgagctggaggagcttcaagttgcggcggtgaggttgattaaggcgaggaattggcgtgaggcaacgaatggccgaaacagagttttgaggaggttgcaaaatatgacagggctggctactttgtatgactacacaaagaatgccgactacgaaaccagtttggttggggagttgttgagccataaggaggtgaagaaggcgttgggggtgtcgaatgtgtccattgtttttgaggagtgtagtgatttagtgggagatgtgttgcacgcggatgtgatgaagagtgtgaaatacatggtggagtttcttgtgaagaacagcaaggtgttgctgtatcaagggcagtatgatctgcgagacggtgtgttttccaccgaggcttgggtgaagaccatgaaatgggaagggatacagaagtttctgtcggcagatcggaatgtgtggaagttgggtggagaaactgctggttatgttcagaaatgggggagtttgagccaagttgcggtttcaggtgctggtcatcttttgccaactgaccagccattgagagctcaagcaatgattgaagactgggttttggataaagggttgtttgccaatgttcaagaggcaatataa

Protein Analysis

564

Amino Acids

63.73

Weight (kDa)

6.5

Isoelectric Point (pI)

33.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 588
Acc65I GGTACC 1 cut(s) 820
AccB1I GGYRCC 2 cut(s) 215, 820
AccB7I CCANNNNNTGG 1 cut(s) 1477
AccI GTMKAC 1 cut(s) 524
AccII CGCG 1 cut(s) 1347
AciI CCGC 7 cut(s) 13, 153, 976, 1101, 1104, 1347, 1581
AcoI YGGCCR 1 cut(s) 1148
AcsI RAATTY 1 cut(s) 968
AcuI CTGAAG 1 cut(s) 222
AfaI GTAC 3 cut(s) 130, 636, 822
AfiI CCNNNNNNNGG 6 cut(s) 862, 915, 1265, 1459, 1477, 1580
AgeI ACCGGT 1 cut(s) 378
AgsI TTSAA 6 cut(s) 44, 536, 932, 1095, 1644, 1683
AjnI CCWGG 1 cut(s) 184
AjuI GAANNNNNNNTTGG 2 cut(s) 1263, 1295
AleI CACNNNNGTG 1 cut(s) 379
AluBI AGCT 8 cut(s) 343, 461, 641, 651, 889, 1082, 1091, 1629
AluI AGCT 8 cut(s) 343, 461, 641, 651, 889, 1082, 1091, 1629
Alw21I GWGCWC 3 cut(s) 653, 830, 1631
Alw26I GTCTC 2 cut(s) 148, 1429
AlwNI CAGNNNCTG 1 cut(s) 1593
AoxI GGCC 3 cut(s) 65, 197, 1148
ApeKI GCWGC 2 cut(s) 340, 1032
ApoI RAATTY 1 cut(s) 968
AsiGI ACCGGT 1 cut(s) 378
Asp718I GGTACC 1 cut(s) 820
AspS9I GGNCC 3 cut(s) 33, 182, 251
AsuC2I CCSGG 2 cut(s) 23, 1008
AvaII GGWCC 3 cut(s) 33, 182, 251
BaeI ACNNNNGTAYC 2 cut(s) 1479, 1512
BanI GGYRCC 2 cut(s) 215, 820
BanII GRGCYC 2 cut(s) 653, 1631
BbsI GAAGAC 2 cut(s) 1473, 1651
Bbv12I GWGCWC 3 cut(s) 653, 830, 1631
BbvI GCAGC 2 cut(s) 352, 1019
BccI CCATC 6 cut(s) 262, 557, 691, 788, 811, 987
BceAI ACGGC 1 cut(s) 80
BcgI CGANNNNNNTGC 2 cut(s) 197, 231
BciT130I CCWGG 1 cut(s) 186
BciVI GTATCC 1 cut(s) 1480
BclI TGATCA 1 cut(s) 1057
BcnI CCSGG 2 cut(s) 23, 1008
BcoDI GTCTC 2 cut(s) 148, 1429
BfaI CTAG 1 cut(s) 51
BfmI CTRYAG 1 cut(s) 361
BfuI GTATCC 1 cut(s) 1480
BisI GCNGC 3 cut(s) 341, 1033, 1102
BlsI GCNGC 3 cut(s) 342, 1034, 1103
Bme1390I CCNGG 3 cut(s) 23, 186, 1008
Bme18I GGWCC 3 cut(s) 33, 182, 251
BmgT120I GGNCC 3 cut(s) 33, 182, 251
BmiI GGNNCC 4 cut(s) 81, 217, 822, 845
BmrFI CCNGG 3 cut(s) 23, 186, 1008
BmrI ACTGGG 2 cut(s) 889, 1658
BmsI GCATC 3 cut(s) 97, 422, 764
BmuI ACTGGG 2 cut(s) 889, 1658
BoxI GACNNNNGTC 1 cut(s) 748
BpiI GAAGAC 2 cut(s) 1473, 1651
BpmI CTGGAG 1 cut(s) 1104
Bpu10I CCTNAGC 1 cut(s) 613
BpuEI CTTGAG 2 cut(s) 639, 1615
BpuMI CCSGG 2 cut(s) 23, 1008
BsaJI CCNNGG 2 cut(s) 247, 1453
BsaWI WCCGGW 1 cut(s) 378
BsaXI ACNNNNNCTCC 2 cut(s) 150, 180
Bsc4I CCNNNNNNNGG 6 cut(s) 862, 915, 1265, 1459, 1477, 1580
Bse118I RCCGGY 1 cut(s) 378
Bse1I ACTGG 5 cut(s) 36, 140, 884, 1234, 1653
Bse3DI GCAATG 1 cut(s) 1642
BseBI CCWGG 1 cut(s) 186
BseDI CCNNGG 2 cut(s) 247, 1453
BseGI GGATG 2 cut(s) 108, 1355
BseLI CCNNNNNNNGG 6 cut(s) 862, 915, 1265, 1459, 1477, 1580
BseMI GCAATG 1 cut(s) 1642
BseMII CTCAG 1 cut(s) 604
BseNI ACTGG 5 cut(s) 36, 140, 884, 1234, 1653
BseRI GAGGAG 4 cut(s) 171, 1101, 1181, 1326
BseXI GCAGC 2 cut(s) 352, 1019
BsgI GTGCAG 1 cut(s) 459
Bsh1236I CGCG 1 cut(s) 1347
BshFI GGCC 3 cut(s) 67, 199, 1150
BshNI GGYRCC 2 cut(s) 215, 820
BshTI ACCGGT 1 cut(s) 378
BsiHKAI GWGCWC 3 cut(s) 653, 830, 1631
BsiSI CCGG 4 cut(s) 22, 379, 909, 1008
BslI CCNNNNNNNGG 6 cut(s) 862, 915, 1265, 1459, 1477, 1580
BsmAI GTCTC 2 cut(s) 148, 1429
BsmBI CGTCTC 1 cut(s) 1429
BsmI GAATGC 2 cut(s) 944, 1223
BsnI GGCC 3 cut(s) 67, 199, 1150
Bsp1286I GDGCHC 3 cut(s) 653, 830, 1631
Bsp1407I TGTACA 1 cut(s) 128
Bsp143I GATC 7 cut(s) 119, 172, 208, 602, 1057, 1427, 1508
Bsp19I CCATGG 1 cut(s) 247
BspACI CCGC 7 cut(s) 13, 153, 976, 1101, 1104, 1347, 1581
BspANI GGCC 3 cut(s) 67, 199, 1150
BspCNI CTCAG 1 cut(s) 605
BspFNI CGCG 1 cut(s) 1347
BspLI GGNNCC 4 cut(s) 81, 217, 822, 845
BspMAI CTGCAG 1 cut(s) 365
BspT107I GGYRCC 2 cut(s) 215, 820
BsrDI GCAATG 1 cut(s) 1642
BsrFI RCCGGY 1 cut(s) 378
BsrGI TGTACA 1 cut(s) 128
BsrI ACTGG 5 cut(s) 36, 140, 884, 1234, 1653
BssAI RCCGGY 1 cut(s) 378
BssECI CCNNGG 2 cut(s) 247, 1453
BssMI GATC 7 cut(s) 119, 172, 208, 602, 1057, 1427, 1508
BssT1I CCWWGG 1 cut(s) 247
Bst2UI CCWGG 1 cut(s) 186
Bst4CI ACNGT 5 cut(s) 179, 297, 788, 825, 1440
Bst6I CTCTTC 3 cut(s) 927, 1068, 1353
BstAPI GCANNNNNTGC 1 cut(s) 509
BstAUI TGTACA 1 cut(s) 128
BstC8I GCNNGC 2 cut(s) 1192, 1345
BstDEI CTNAG 2 cut(s) 613, 958
BstDSI CCRYGG 1 cut(s) 247
BstF5I GGATG 2 cut(s) 108, 1355
BstFNI CGCG 1 cut(s) 1347
BstKTI GATC 7 cut(s) 122, 175, 211, 605, 1060, 1430, 1511
BstMAI GTCTC 2 cut(s) 148, 1429
BstMBI GATC 7 cut(s) 119, 172, 208, 602, 1057, 1427, 1508
BstMWI GCNNNNNNNGC 7 cut(s) 73, 340, 467, 509, 762, 1029, 1088
BstNI CCWGG 1 cut(s) 186
BstNSI RCATGY 1 cut(s) 426
BstPAI GACNNNNGTC 1 cut(s) 748
BstSCI CCNGG 3 cut(s) 21, 184, 1006
BstSFI CTRYAG 1 cut(s) 361
BstUI CGCG 1 cut(s) 1347
BstV1I GCAGC 2 cut(s) 352, 1019
BstV2I GAAGAC 2 cut(s) 1473, 1651
BsuI GTATCC 1 cut(s) 1480
BsuRI GGCC 3 cut(s) 67, 199, 1150
BtgI CCRYGG 1 cut(s) 247
BtgZI GCGATG 2 cut(s) 74, 787
BtsCI GGATG 2 cut(s) 108, 1355
Cac8I GCNNGC 2 cut(s) 1192, 1345
CaiI CAGNNNCTG 1 cut(s) 1593
Cfr10I RCCGGY 1 cut(s) 378
Cfr13I GGNCC 3 cut(s) 33, 182, 251
CseI GACGC 1 cut(s) 346
Csp6I GTAC 3 cut(s) 129, 635, 821
CspAI ACCGGT 1 cut(s) 378
CviAII CATG 7 cut(s) 126, 191, 248, 423, 1029, 1373, 1472
CviQI GTAC 3 cut(s) 129, 635, 821
DdeI CTNAG 2 cut(s) 613, 958
DpnI GATC 7 cut(s) 121, 174, 210, 604, 1059, 1429, 1510
DpnII GATC 7 cut(s) 119, 172, 208, 602, 1057, 1427, 1508
DraI TTTAAA 1 cut(s) 694
EaeI YGGCCR 1 cut(s) 1148
Eam1104I CTCTTC 3 cut(s) 927, 1068, 1353
EarI CTCTTC 3 cut(s) 927, 1068, 1353
EciI GGCGGA 1 cut(s) 168
Ecl136II GAGCTC 2 cut(s) 651, 1629
Eco130I CCWWGG 1 cut(s) 247
Eco24I GRGCYC 2 cut(s) 653, 1631
Eco47I GGWCC 3 cut(s) 33, 182, 251
Eco53kI GAGCTC 2 cut(s) 651, 1629
Eco57I CTGAAG 1 cut(s) 222
EcoICRI GAGCTC 2 cut(s) 651, 1629
EcoRII CCWGG 1 cut(s) 184
EcoT14I CCWWGG 1 cut(s) 247
EcoT38I GRGCYC 2 cut(s) 653, 1631
ErhI CCWWGG 1 cut(s) 247
Esp3I CGTCTC 1 cut(s) 1429
FaeI CATG 7 cut(s) 129, 194, 251, 426, 1032, 1376, 1475
FatI CATG 7 cut(s) 125, 190, 247, 422, 1028, 1372, 1471
FbaI TGATCA 1 cut(s) 1057
FblI GTMKAC 1 cut(s) 524
Fnu4HI GCNGC 3 cut(s) 341, 1033, 1102
FokI GGATG 2 cut(s) 95, 1362
FriOI GRGCYC 2 cut(s) 653, 1631
Fsp4HI GCNGC 3 cut(s) 341, 1033, 1102
FspBI CTAG 1 cut(s) 51
GluI GCNGC 3 cut(s) 341, 1033, 1102
GsuI CTGGAG 1 cut(s) 1104
HaeIII GGCC 3 cut(s) 67, 199, 1150
HapII CCGG 4 cut(s) 22, 379, 909, 1008
HgaI GACGC 1 cut(s) 346
Hin1II CATG 7 cut(s) 129, 194, 251, 426, 1032, 1376, 1475
HincII GTYRAC 1 cut(s) 169
HindII GTYRAC 1 cut(s) 169
HinfI GANTC 7 cut(s) 44, 71, 238, 437, 567, 954, 1013
HpaII CCGG 4 cut(s) 22, 379, 909, 1008
Hpy166II GTNNAC 5 cut(s) 131, 169, 182, 494, 525
Hpy188I TCNGA 5 cut(s) 431, 572, 990, 1513, 1555
Hpy188III TCNNGA 5 cut(s) 41, 612, 687, 831, 1683
Hpy8I GTNNAC 5 cut(s) 131, 169, 182, 494, 525
Hpy99I CGWCG 1 cut(s) 152
HpyAV CCTTC 5 cut(s) 380, 474, 585, 1268, 1476
HpyCH4III ACNGT 5 cut(s) 179, 297, 788, 825, 1440
HpyCH4V TGCA 7 cut(s) 363, 476, 720, 727, 894, 1175, 1343
HpyF10VI GCNNNNNNNGC 7 cut(s) 73, 340, 467, 509, 762, 1029, 1088
HpyF3I CTNAG 2 cut(s) 613, 958
Hsp92II CATG 7 cut(s) 129, 194, 251, 426, 1032, 1376, 1475
KpnI GGTACC 1 cut(s) 824
Ksp22I TGATCA 1 cut(s) 1057
Kzo9I GATC 7 cut(s) 119, 172, 208, 602, 1057, 1427, 1508
LmnI GCTCC 4 cut(s) 158, 466, 833, 1088
Lsp1109I GCAGC 2 cut(s) 352, 1019
LweI GCATC 3 cut(s) 97, 422, 764
MaeI CTAG 1 cut(s) 51
MaeIII GTNAC 2 cut(s) 741, 918
MalI GATC 7 cut(s) 121, 174, 210, 604, 1059, 1429, 1510
MboI GATC 7 cut(s) 119, 172, 208, 602, 1057, 1427, 1508
MboII GAAGA 9 cut(s) 97, 636, 944, 1085, 1283, 1370, 1403, 1478, 1656
MhlI GDGCHC 3 cut(s) 653, 830, 1631
MluCI AATT 4 cut(s) 454, 624, 968, 1127
MlyI GAGTC 3 cut(s) 232, 431, 963
MmeI TCCRAC 1 cut(s) 107
MseI TTAA 6 cut(s) 397, 447, 457, 693, 948, 1117
MslI CAYNNNNRTG 3 cut(s) 52, 379, 1348
MspI CCGG 4 cut(s) 22, 379, 909, 1008
MspR9I CCNGG 3 cut(s) 23, 186, 1008
Mva1269I GAATGC 2 cut(s) 944, 1223
MvaI CCWGG 1 cut(s) 186
MvnI CGCG 1 cut(s) 1347
MwoI GCNNNNNNNGC 7 cut(s) 73, 340, 467, 509, 762, 1029, 1088
NciI CCSGG 2 cut(s) 23, 1008
NcoI CCATGG 1 cut(s) 247
NdeII GATC 7 cut(s) 119, 172, 208, 602, 1057, 1427, 1508
NlaIII CATG 7 cut(s) 129, 194, 251, 426, 1032, 1376, 1475
NlaIV GGNNCC 4 cut(s) 81, 217, 822, 845
NmeAIII GCCGAG 1 cut(s) 968
NmuCI GTSAC 1 cut(s) 741
NspI RCATGY 1 cut(s) 426
OliI CACNNNNGTG 1 cut(s) 379
PcsI WCGNNNNNNNCGW 1 cut(s) 821
PctI GAATGC 2 cut(s) 944, 1223
PfeI GAWTC 4 cut(s) 44, 71, 567, 1013
PflMI CCANNNNNTGG 1 cut(s) 1477
PinAI ACCGGT 1 cut(s) 378
PkrI GCNGC 3 cut(s) 342, 1034, 1103
PleI GAGTC 3 cut(s) 232, 431, 962
PpsI GAGTC 3 cut(s) 232, 431, 962
PshAI GACNNNNGTC 1 cut(s) 748
PsiI TTATAA 1 cut(s) 588
Psp124BI GAGCTC 2 cut(s) 653, 1631
Psp6I CCWGG 1 cut(s) 184
PspGI CCWGG 1 cut(s) 184
PspN4I GGNNCC 4 cut(s) 81, 217, 822, 845
PspPI GGNCC 3 cut(s) 33, 182, 251
PstI CTGCAG 1 cut(s) 365
PstNI CAGNNNCTG 1 cut(s) 1593
RsaI GTAC 3 cut(s) 130, 636, 822
RsaNI GTAC 3 cut(s) 129, 635, 821
RseI CAYNNNNRTG 3 cut(s) 52, 379, 1348
SacI GAGCTC 2 cut(s) 653, 1631
SaqAI TTAA 6 cut(s) 397, 447, 457, 693, 948, 1117
SatI GCNGC 3 cut(s) 341, 1033, 1102
Sau3AI GATC 7 cut(s) 119, 172, 208, 602, 1057, 1427, 1508
Sau96I GGNCC 3 cut(s) 33, 182, 251
SchI GAGTC 3 cut(s) 232, 431, 963
ScrFI CCNGG 3 cut(s) 23, 186, 1008
SduI GDGCHC 3 cut(s) 653, 830, 1631
SfaNI GCATC 3 cut(s) 97, 422, 764
SfcI CTRYAG 1 cut(s) 361
SgrAI CRCCGGYG 1 cut(s) 378
SinI GGWCC 3 cut(s) 33, 182, 251
SmiMI CAYNNNNRTG 3 cut(s) 52, 379, 1348
SmlI CTYRAG 2 cut(s) 654, 1630
SmoI CTYRAG 2 cut(s) 654, 1630
Sse9I AATT 4 cut(s) 454, 624, 968, 1127
SsiI CCGC 7 cut(s) 13, 153, 976, 1101, 1104, 1347, 1581
SspMI CTAG 1 cut(s) 51
SstI GAGCTC 2 cut(s) 653, 1631
StyD4I CCNGG 3 cut(s) 21, 184, 1006
StyI CCWWGG 1 cut(s) 247
TaaI ACNGT 5 cut(s) 179, 297, 788, 825, 1440
TaqI TCGA 5 cut(s) 647, 686, 815, 861, 1290
TasI AATT 4 cut(s) 454, 624, 968, 1127
TatI WGTACW 1 cut(s) 128
TauI GCSGC 1 cut(s) 1104
TfiI GAWTC 4 cut(s) 44, 71, 567, 1013
Tru1I TTAA 6 cut(s) 397, 447, 457, 693, 948, 1117
Tru9I TTAA 6 cut(s) 397, 447, 457, 693, 948, 1117
TseFI GTSAC 1 cut(s) 741
TseI GCWGC 2 cut(s) 340, 1032
Tsp45I GTSAC 1 cut(s) 741
TspDTI ATGAA 4 cut(s) 70, 97, 1371, 1488
TspGWI ACGGA 1 cut(s) 136
Van91I CCANNNNNTGG 1 cut(s) 1477
VpaK11BI GGWCC 3 cut(s) 33, 182, 251
XapI RAATTY 1 cut(s) 968
XceI RCATGY 1 cut(s) 426
XmiI GTMKAC 1 cut(s) 524
XspI CTAG 1 cut(s) 51
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.