FvH4_2g35220

Uncharacterized protein family UPF0054

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0003247
Physical Location & Seq
Reverse (-)
25999138 .. 26003646
4509 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g35220.t1

Sequence Viewer

Length: 1773 bp
ATGCTCCTCCATCTCTCTACTCTCCTCCGCACCATCCACCCACGCGCCAATACTACCCGCCCAATGGCGCGTTACATTCCACGCGCCACCCTCATATCCATCACCCCCATTCCCATCGGAAACACTCCCAGACCGAATTCCATCCTCCCTCCCCAAACTCACCGTTTCGACGCCTCCAAAGCCTCGCTCTTCTTCGGCCGGAGATTCCACGCGCTCTGCGGCGGCGGGCGGAGAACGGGTCCGAGACCGTCGCTACGAATCTGCGCGGCGCAGAGAGACTACCGGAGAGTGAGGCGGCGAGCTCCGAAGAGCAAGGTCAAGGAGCTCGAGCTCAACGTCAGCATTTGCATCGAGGAAGAGTTGCCGGACGATCCTGAAATCCTTGGCGTTGCGGAATTGCTGAGGATTAATGTGCCGATGGCGTTGAAGCTAGCATTTGATGGTTTAAAAGGTTCGGAGTATAAAACGAGGGACAATGCCATTAGCGATGTTGGAGGTTTTCAAAGCGTGGAGCTTTCGGTGATGCTTTGTAATGATGAGTTTATCCGAAAGCTTAACAAAGAGTGGAGAGATGAGGACCACGCTACTGATGTTCTTTCGATGTCGCAACATGTCCCTGAGCTCAGGCTTCCCATTCTTATGTTGGGCGACGTTGTGATTTCTGTTGAGACGGCAGCGAGACAAGCAGAAGAAAGAGGACATACACTTCTTGACGAGATACGCATTCTGATGATACATGGATTGTTGCATCTATTAGGATTTGATCATGAGATAAGCGAAGAAGCCGAAGTGGAAATGGAGAAGGAGGAGGAGCTTCTCTTGAAGAGCCTTGGGTGGGCGGGAAAAGGATTGATTCAAAGTGCGTCCAATGCTGAAATCAATGCAATTTCCCATGAGGATAAACAAGATGACAGGAAGAGAGAAGGCAGCCTTCGATTTTATAAACCAAAGTTCAAATATATTTTCTGCGATATGGATGGCACCCTTCTCAACAGTAAAACACAAATCAGCTCAACAACTGCAAAGGCTCTTAAGGAGGTCTCATCAAGGGGTGTGAAAATAGTGATAGCAACAGGAAAAACTCGCTCAGCTGTGATCAACGTTTTTAAAATGGTAGACTTAGCAGGAAAAGATGGCATTGTTTCAGAATTTTCTCCTGGAGTTTTCTGCCAGGGATTGCTCGTTTATGGTAAGCAAGGACGGGAAATCTTTAAAGGGAATTTAGATCCAAATGTCTGCAGAGAGGCATGCCTTTACTCTTGGGAGAATAGGATACCACTTATTGCTTACAGCGAGGATCGTTGCTTCACTCTATTTGACCACCCGCTAGTTGACTCTCTGCACACTGTATATCATGAGCCAAAGGGAGAGATCATGCCTTCAGTTGAGCATCTCTTGGCTGCTGGTGACATACAGAAAGTGATCTTCATGGACACTGCCGAAGGAGTCGCAACTACTTTGAGGCCATACTGGTCAGGAGCCATTAGAGATCGTGCGGCAGTTGTTCAAGCTCAGCCAGACATGCTTGAAATTGTACCCCCGGGGACCTCAAAAGGGAGTGGCGTAAAGTTGCTGCTTGATCATTTGGGCGTCACTCCAAAGGAGATCATGGCTATTGGAGATGGAGAAAATGACATTGAGATGCTTGAGCTAGCTTCTTTGGGTATTGCTCTTAGCAATGGTTCAGAGAAAACAAAGGCTGTTGCTAATCTAATTGGTGCCAGTAATGACGAAGATGGTGCAGCTGATGCAATCTACCGGTATGCATTTTGA

Protein Analysis

591

Amino Acids

65.4

Weight (kDa)

6.11

Isoelectric Point (pI)

36.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
YbeY PF02130 168 - 276 2.8e-32 Endoribonuclease YbeY
Hydrolase_3 PF08282 321 - 585 6.2e-52 haloacid dehalogenase-like hydrolase
S6PP PF05116 501 - 564 1.4e-08 Sucrose-6F-phosphate phosphohydrolase
Hydrolase PF00702 510 - 552 2.5e-06 haloacid dehalogenase-like hydrolase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 942
AccB1I GGYRCC 2 cut(s) 980, 1718
AccI GTMKAC 1 cut(s) 1116
AccII CGCG 5 cut(s) 45, 70, 84, 212, 266
AclI AACGTT 1 cut(s) 1101
AclWI GGATC 3 cut(s) 365, 1220, 1305
AcoI YGGCCR 1 cut(s) 196
AcsI RAATTY 3 cut(s) 136, 1148, 1219
AcuI CTGAAG 1 cut(s) 1365
AcyI GRCGYC 2 cut(s) 171, 1590
AfaI GTAC 1 cut(s) 1536
AfiI CCNNNNNNNGG 3 cut(s) 64, 835, 1554
AflII CTTAAG 1 cut(s) 1031
AflIII ACRYGT 1 cut(s) 610
AgeI ACCGGT 1 cut(s) 1758
AgsI TTSAA 7 cut(s) 427, 503, 823, 857, 955, 1508, 1529
AjnI CCWGG 2 cut(s) 1156, 1170
Alw21I GWGCWC 4 cut(s) 304, 327, 333, 624
Alw26I GTCTC 5 cut(s) 238, 270, 662, 673, 1045
AlwI GGATC 3 cut(s) 365, 1220, 1305
Ama87I CYCGRG 2 cut(s) 326, 1540
AoxI GGCC 2 cut(s) 196, 1463
ApeKI GCWGC 5 cut(s) 674, 927, 1400, 1573, 1742
ApoI RAATTY 3 cut(s) 136, 1148, 1219
AseI ATTAAT 1 cut(s) 408
AsiGI ACCGGT 1 cut(s) 1758
AspLEI GCGC 6 cut(s) 47, 70, 86, 214, 266, 271
AspS9I GGNCC 3 cut(s) 239, 577, 1545
AsuC2I CCSGG 2 cut(s) 1541, 1542
AsuHPI GGTGA 4 cut(s) 94, 152, 532, 1418
AsuNHI GCTAGC 2 cut(s) 430, 1651
AvaI CYCGRG 2 cut(s) 326, 1540
AvaII GGWCC 3 cut(s) 239, 577, 1545
BanI GGYRCC 2 cut(s) 980, 1718
BanII GRGCYC 4 cut(s) 304, 327, 333, 624
Bbv12I GWGCWC 4 cut(s) 304, 327, 333, 624
BbvCI CCTCAGC 1 cut(s) 401
BbvI GCAGC 5 cut(s) 686, 939, 1387, 1560, 1754
BceAI ACGGC 1 cut(s) 687
BcgI CGANNNNNNTGC 4 cut(s) 331, 365, 1721, 1755
BciT130I CCWGG 2 cut(s) 1158, 1172
BciVI GTATCC 1 cut(s) 1266
BclI TGATCA 3 cut(s) 763, 1095, 1579
BcnI CCSGG 2 cut(s) 1541, 1542
BcoDI GTCTC 5 cut(s) 238, 270, 662, 673, 1045
BfaI CTAG 3 cut(s) 431, 1328, 1652
BfmI CTRYAG 1 cut(s) 1237
BfrI CTTAAG 1 cut(s) 1031
BfuI GTATCC 1 cut(s) 1266
BlpI GCTNAGC 2 cut(s) 1087, 1512
Bme1390I CCNGG 4 cut(s) 1158, 1172, 1541, 1542
Bme18I GGWCC 3 cut(s) 239, 577, 1545
BmeT110I CYCGRG 2 cut(s) 326, 1540
BmgT120I GGNCC 3 cut(s) 239, 577, 1545
BmiI GGNNCC 5 cut(s) 240, 982, 1480, 1546, 1720
BmrFI CCNGG 4 cut(s) 1158, 1172, 1541, 1542
BmsI GCATC 6 cut(s) 357, 513, 757, 1399, 1632, 1738
BmtI GCTAGC 2 cut(s) 434, 1655
BpmI CTGGAG 1 cut(s) 1179
Bpu10I CCTNAGC 3 cut(s) 401, 618, 623
Bpu1102I GCTNAGC 2 cut(s) 1087, 1512
BpuEI CTTGAG 1 cut(s) 1667
BpuMI CCSGG 2 cut(s) 1541, 1542
BsaHI GRCGYC 2 cut(s) 171, 1590
BsaI GGTCTC 2 cut(s) 238, 1045
BsaJI CCNNGG 6 cut(s) 382, 829, 1171, 1539, 1540, 1541
BsaWI WCCGGW 2 cut(s) 282, 1758
BsaXI ACNNNNNCTCC 2 cut(s) 223, 253
Bsc4I CCNNNNNNNGG 3 cut(s) 64, 835, 1554
Bse118I RCCGGY 1 cut(s) 1758
Bse1I ACTGG 2 cut(s) 1475, 1722
Bse3DI GCAATG 1 cut(s) 1684
BseBI CCWGG 2 cut(s) 1158, 1172
BseDI CCNNGG 6 cut(s) 382, 829, 1171, 1539, 1540, 1541
BseGI GGATG 3 cut(s) 33, 141, 982
BseLI CCNNNNNNNGG 3 cut(s) 64, 835, 1554
BseMI GCAATG 1 cut(s) 1684
BseMII CTCAG 5 cut(s) 392, 609, 637, 1101, 1526
BseNI ACTGG 2 cut(s) 1475, 1722
BseRI GAGGAG 3 cut(s) 14, 821, 824
BseX3I CGGCCG 1 cut(s) 196
BseXI GCAGC 5 cut(s) 686, 939, 1387, 1560, 1754
BsgI GTGCAG 2 cut(s) 1325, 1761
Bsh1236I CGCG 5 cut(s) 45, 70, 84, 212, 266
Bsh1285I CGRYCG 1 cut(s) 199
BshFI GGCC 2 cut(s) 198, 1465
BshNI GGYRCC 2 cut(s) 980, 1718
BshTI ACCGGT 1 cut(s) 1758
BsiEI CGRYCG 1 cut(s) 199
BsiHKAI GWGCWC 4 cut(s) 304, 327, 333, 624
BsiHKCI CYCGRG 2 cut(s) 326, 1540
BsiSI CCGG 5 cut(s) 199, 283, 365, 1541, 1759
BslFI GGGAC 3 cut(s) 485, 599, 1558
BslI CCNNNNNNNGG 3 cut(s) 64, 835, 1554
BsmAI GTCTC 5 cut(s) 238, 270, 662, 673, 1045
BsmBI CGTCTC 1 cut(s) 662
BsmFI GGGAC 3 cut(s) 485, 599, 1558
BsmI GAATGC 1 cut(s) 723
BsnI GGCC 2 cut(s) 198, 1465
Bso31I GGTCTC 2 cut(s) 238, 1045
BsoBI CYCGRG 2 cut(s) 326, 1540
Bsp1286I GDGCHC 4 cut(s) 304, 327, 333, 624
Bsp1720I GCTNAGC 2 cut(s) 1087, 1512
BspANI GGCC 2 cut(s) 198, 1465
BspCNI CTCAG 5 cut(s) 393, 610, 636, 1100, 1525
BspFNI CGCG 5 cut(s) 45, 70, 84, 212, 266
BspHI TCATGA 2 cut(s) 766, 1354
BspLI GGNNCC 5 cut(s) 240, 982, 1480, 1546, 1720
BspMAI CTGCAG 1 cut(s) 1241
BspOI GCTAGC 2 cut(s) 434, 1655
BspPI GGATC 3 cut(s) 365, 1220, 1305
BspQI GCTCTTC 3 cut(s) 194, 302, 818
BspT107I GGYRCC 2 cut(s) 980, 1718
BspTI CTTAAG 1 cut(s) 1031
BspTNI GGTCTC 2 cut(s) 238, 1045
BsrDI GCAATG 1 cut(s) 1684
BsrFI RCCGGY 1 cut(s) 1758
BsrI ACTGG 2 cut(s) 1475, 1722
BssAI RCCGGY 1 cut(s) 1758
BssECI CCNNGG 6 cut(s) 382, 829, 1171, 1539, 1540, 1541
BssNI GRCGYC 2 cut(s) 171, 1590
BssT1I CCWWGG 2 cut(s) 382, 829
Bst2UI CCWGG 2 cut(s) 1158, 1172
Bst4CI ACNGT 4 cut(s) 164, 249, 995, 1348
Bst6I CTCTTC 5 cut(s) 194, 302, 351, 818, 911
BstACI GRCGYC 2 cut(s) 171, 1590
BstAFI CTTAAG 1 cut(s) 1031
BstAPI GCANNNNNTGC 1 cut(s) 1748
BstC8I GCNNGC 5 cut(s) 227, 300, 432, 1249, 1653
BstDEI CTNAG 7 cut(s) 401, 618, 623, 1087, 1120, 1512, 1673
BstF5I GGATG 3 cut(s) 33, 141, 982
BstFNI CGCG 5 cut(s) 45, 70, 84, 212, 266
BstHHI GCGC 6 cut(s) 47, 70, 86, 214, 266, 271
BstMAI GTCTC 5 cut(s) 238, 270, 662, 673, 1045
BstMCI CGRYCG 1 cut(s) 199
BstMWI GCNNNNNNNGC 5 cut(s) 179, 683, 869, 1522, 1748
BstNI CCWGG 2 cut(s) 1158, 1172
BstNSI RCATGY 3 cut(s) 614, 1251, 1525
BstSCI CCNGG 4 cut(s) 1156, 1170, 1539, 1540
BstSFI CTRYAG 1 cut(s) 1237
BstUI CGCG 5 cut(s) 45, 70, 84, 212, 266
BstV1I GCAGC 5 cut(s) 686, 939, 1387, 1560, 1754
BstX2I RGATCY 1 cut(s) 1225
BstYI RGATCY 1 cut(s) 1225
BstZI CGGCCG 1 cut(s) 196
BsuI GTATCC 1 cut(s) 1266
BsuRI GGCC 2 cut(s) 198, 1465
BtgZI GCGATG 1 cut(s) 501
BtsCI GGATG 3 cut(s) 33, 141, 982
BtsI GCAGTG 1 cut(s) 1434
BtsIMutI CAGTG 2 cut(s) 1344, 1434
Cac8I GCNNGC 5 cut(s) 227, 300, 432, 1249, 1653
CciI TCATGA 2 cut(s) 766, 1354
CfoI GCGC 6 cut(s) 47, 70, 86, 214, 266, 271
Cfr10I RCCGGY 1 cut(s) 1758
Cfr13I GGNCC 3 cut(s) 239, 577, 1545
Cfr9I CCCGGG 1 cut(s) 1540
CseI GACGC 3 cut(s) 179, 852, 1579
Csp6I GTAC 1 cut(s) 1535
CspAI ACCGGT 1 cut(s) 1758
CviQI GTAC 1 cut(s) 1535
DdeI CTNAG 7 cut(s) 401, 618, 623, 1087, 1120, 1512, 1673
DraI TTTAAA 3 cut(s) 447, 1108, 1213
EaeI YGGCCR 1 cut(s) 196
EagI CGGCCG 1 cut(s) 196
Eam1104I CTCTTC 5 cut(s) 194, 302, 351, 818, 911
EarI CTCTTC 5 cut(s) 194, 302, 351, 818, 911
EciI GGCGGA 1 cut(s) 244
Ecl136II GAGCTC 4 cut(s) 302, 325, 331, 622
EclXI CGGCCG 1 cut(s) 196
Eco130I CCWWGG 2 cut(s) 382, 829
Eco24I GRGCYC 4 cut(s) 304, 327, 333, 624
Eco31I GGTCTC 2 cut(s) 238, 1045
Eco47I GGWCC 3 cut(s) 239, 577, 1545
Eco52I CGGCCG 1 cut(s) 196
Eco53kI GAGCTC 4 cut(s) 302, 325, 331, 622
Eco57I CTGAAG 1 cut(s) 1365
Eco88I CYCGRG 2 cut(s) 326, 1540
EcoICRI GAGCTC 4 cut(s) 302, 325, 331, 622
EcoO109I RGGNCCY 1 cut(s) 1545
EcoRI GAATTC 1 cut(s) 136
EcoRII CCWGG 2 cut(s) 1156, 1170
EcoT14I CCWWGG 2 cut(s) 382, 829
EcoT22I ATGCAT 1 cut(s) 1768
EcoT38I GRGCYC 4 cut(s) 304, 327, 333, 624
ErhI CCWWGG 2 cut(s) 382, 829
Esp3I CGTCTC 1 cut(s) 662
FalI AAGNNNNNCTT 2 cut(s) 915, 947
FaqI GGGAC 3 cut(s) 485, 599, 1558
FauI CCCGC 4 cut(s) 65, 218, 832, 1332
FbaI TGATCA 3 cut(s) 763, 1095, 1579
FblI GTMKAC 1 cut(s) 1116
FokI GGATG 3 cut(s) 20, 128, 989
FriOI GRGCYC 4 cut(s) 304, 327, 333, 624
FspBI CTAG 3 cut(s) 431, 1328, 1652
GlaI GCGC 6 cut(s) 46, 69, 85, 213, 265, 270
GsuI CTGGAG 1 cut(s) 1179
HaeIII GGCC 2 cut(s) 198, 1465
HapII CCGG 5 cut(s) 199, 283, 365, 1541, 1759
HgaI GACGC 3 cut(s) 179, 852, 1579
HhaI GCGC 6 cut(s) 47, 70, 86, 214, 266, 271
Hin1I GRCGYC 2 cut(s) 171, 1590
Hin6I GCGC 6 cut(s) 45, 68, 84, 212, 264, 269
HinP1I GCGC 6 cut(s) 45, 68, 84, 212, 264, 269
HincII GTYRAC 1 cut(s) 1333
HindII GTYRAC 1 cut(s) 1333
HindIII AAGCTT 1 cut(s) 551
HinfI GANTC 5 cut(s) 204, 258, 853, 1334, 1446
HpaII CCGG 5 cut(s) 199, 283, 365, 1541, 1759
HphI GGTGA 4 cut(s) 94, 152, 532, 1418
Hpy166II GTNNAC 2 cut(s) 1117, 1333
Hpy188I TCNGA 8 cut(s) 119, 243, 306, 457, 548, 729, 1147, 1687
Hpy188III TCNNGA 6 cut(s) 374, 710, 767, 820, 1355, 1476
Hpy8I GTNNAC 2 cut(s) 1117, 1333
Hpy99I CGWCG 3 cut(s) 173, 253, 653
HpyAV CCTTC 6 cut(s) 796, 917, 941, 995, 1389, 1436
HpyCH4III ACNGT 4 cut(s) 164, 249, 995, 1348
HpyCH4IV ACGT 3 cut(s) 336, 651, 1101
HpyCH4V TGCA 9 cut(s) 348, 748, 884, 1022, 1239, 1342, 1742, 1751, 1766
HpyF10VI GCNNNNNNNGC 5 cut(s) 179, 683, 869, 1522, 1748
HpyF3I CTNAG 7 cut(s) 401, 618, 623, 1087, 1120, 1512, 1673
HpySE526I ACGT 3 cut(s) 336, 651, 1101
Hsp92I GRCGYC 2 cut(s) 171, 1590
HspAI GCGC 6 cut(s) 45, 68, 84, 212, 264, 269
Ksp22I TGATCA 3 cut(s) 763, 1095, 1579
LguI GCTCTTC 3 cut(s) 194, 302, 818
LmnI GCTCC 6 cut(s) 9, 307, 322, 511, 811, 1478
Lsp1109I GCAGC 5 cut(s) 686, 939, 1387, 1560, 1754
LweI GCATC 6 cut(s) 357, 513, 757, 1399, 1632, 1738
MaeI CTAG 3 cut(s) 431, 1328, 1652
MaeII ACGT 3 cut(s) 336, 651, 1101
MaeIII GTNAC 3 cut(s) 71, 1406, 1591
MflI RGATCY 1 cut(s) 1225
MhlI GDGCHC 4 cut(s) 304, 327, 333, 624
MluCI AATT 7 cut(s) 136, 395, 885, 1148, 1219, 1530, 1713
MlyI GAGTC 2 cut(s) 1328, 1455
MmeI TCCRAC 1 cut(s) 472
Mph1103I ATGCAT 1 cut(s) 1768
MseI TTAA 6 cut(s) 408, 446, 555, 1032, 1107, 1212
MslI CAYNNNNRTG 3 cut(s) 638, 728, 1640
MspA1I CMGCKG 2 cut(s) 1091, 1745
MspCI CTTAAG 1 cut(s) 1031
MspI CCGG 5 cut(s) 199, 283, 365, 1541, 1759
MspR9I CCNGG 4 cut(s) 1158, 1172, 1541, 1542
MteI GCGCNGCGC 1 cut(s) 267
Mva1269I GAATGC 1 cut(s) 723
MvaI CCWGG 2 cut(s) 1158, 1172
MvnI CGCG 5 cut(s) 45, 70, 84, 212, 266
MwoI GCNNNNNNNGC 5 cut(s) 179, 683, 869, 1522, 1748
NciI CCSGG 2 cut(s) 1541, 1542
NheI GCTAGC 2 cut(s) 430, 1651
NlaIV GGNNCC 5 cut(s) 240, 982, 1480, 1546, 1720
NmuCI GTSAC 2 cut(s) 1406, 1591
NsiI ATGCAT 1 cut(s) 1768
NspI RCATGY 3 cut(s) 614, 1251, 1525
PaeI GCATGC 1 cut(s) 1251
PaeR7I CTCGAG 1 cut(s) 326
PagI TCATGA 2 cut(s) 766, 1354
PciI ACATGT 1 cut(s) 610
PciSI GCTCTTC 3 cut(s) 194, 302, 818
PcsI WCGNNNNNNNCGW 1 cut(s) 333
PctI GAATGC 1 cut(s) 723
PfeI GAWTC 3 cut(s) 204, 258, 853
PfoI TCCNGGA 1 cut(s) 1156
PinAI ACCGGT 1 cut(s) 1758
PleI GAGTC 2 cut(s) 1328, 1454
PpsI GAGTC 2 cut(s) 1328, 1454
PpuMI RGGWCCY 1 cut(s) 1545
PscI ACATGT 1 cut(s) 610
PshBI ATTAAT 1 cut(s) 408
PsiI TTATAA 1 cut(s) 942
Psp124BI GAGCTC 4 cut(s) 304, 327, 333, 624
Psp1406I AACGTT 1 cut(s) 1101
Psp5II RGGWCCY 1 cut(s) 1545
Psp6I CCWGG 2 cut(s) 1156, 1170
PspGI CCWGG 2 cut(s) 1156, 1170
PspN4I GGNNCC 5 cut(s) 240, 982, 1480, 1546, 1720
PspPI GGNCC 3 cut(s) 239, 577, 1545
PspPPI RGGWCCY 1 cut(s) 1545
PspXI VCTCGAGB 1 cut(s) 326
PstI CTGCAG 1 cut(s) 1241
PsuI RGATCY 1 cut(s) 1225
PvuII CAGCTG 2 cut(s) 1091, 1745
RsaI GTAC 1 cut(s) 1536
RsaNI GTAC 1 cut(s) 1535
RseI CAYNNNNRTG 3 cut(s) 638, 728, 1640
SacI GAGCTC 4 cut(s) 304, 327, 333, 624
SapI GCTCTTC 3 cut(s) 194, 302, 818
SaqAI TTAA 6 cut(s) 408, 446, 555, 1032, 1107, 1212
Sau96I GGNCC 3 cut(s) 239, 577, 1545
SchI GAGTC 2 cut(s) 1328, 1455
ScrFI CCNGG 4 cut(s) 1158, 1172, 1541, 1542
SduI GDGCHC 4 cut(s) 304, 327, 333, 624
SfaNI GCATC 6 cut(s) 357, 513, 757, 1399, 1632, 1738
SfcI CTRYAG 1 cut(s) 1237
Sfr274I CTCGAG 1 cut(s) 326
SinI GGWCC 3 cut(s) 239, 577, 1545
SlaI CTCGAG 1 cut(s) 326
SmaI CCCGGG 1 cut(s) 1542
SmiMI CAYNNNNRTG 3 cut(s) 638, 728, 1640
SmlI CTYRAG 3 cut(s) 326, 1031, 1646
SmoI CTYRAG 3 cut(s) 326, 1031, 1646
SphI GCATGC 1 cut(s) 1251
Sse9I AATT 7 cut(s) 136, 395, 885, 1148, 1219, 1530, 1713
SspMI CTAG 3 cut(s) 431, 1328, 1652
SstI GAGCTC 4 cut(s) 304, 327, 333, 624
StyD4I CCNGG 4 cut(s) 1156, 1170, 1539, 1540
StyI CCWWGG 2 cut(s) 382, 829
TaaI ACNGT 4 cut(s) 164, 249, 995, 1348
TaiI ACGT 3 cut(s) 339, 654, 1104
TaqI TCGA 5 cut(s) 168, 327, 351, 599, 934
TaqII GACCGA 1 cut(s) 148
TasI AATT 7 cut(s) 136, 395, 885, 1148, 1219, 1530, 1713
TauI GCSGC 5 cut(s) 222, 225, 269, 298, 1499
TfiI GAWTC 3 cut(s) 204, 258, 853
Tru1I TTAA 6 cut(s) 408, 446, 555, 1032, 1107, 1212
Tru9I TTAA 6 cut(s) 408, 446, 555, 1032, 1107, 1212
TscAI CASTG 2 cut(s) 1351, 1441
TseFI GTSAC 2 cut(s) 1406, 1591
TseI GCWGC 5 cut(s) 674, 927, 1400, 1573, 1742
Tsp45I GTSAC 2 cut(s) 1406, 1591
TspDTI ATGAA 1 cut(s) 1417
TspMI CCCGGG 1 cut(s) 1540
TspRI CASTG 2 cut(s) 1351, 1441
Vha464I CTTAAG 1 cut(s) 1031
VpaK11BI GGWCC 3 cut(s) 239, 577, 1545
VspI ATTAAT 1 cut(s) 408
XapI RAATTY 3 cut(s) 136, 1148, 1219
XceI RCATGY 3 cut(s) 614, 1251, 1525
XcmI CCANNNNNNNNNTGG 1 cut(s) 640
XhoI CTCGAG 1 cut(s) 326
XmaI CCCGGG 1 cut(s) 1540
XmiI GTMKAC 1 cut(s) 1116
XspI CTAG 3 cut(s) 431, 1328, 1652
Zsp2I ATGCAT 1 cut(s) 1768
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.