RLG00000010771

Uncharacterized protein family UPF0054

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0003247
Physical Location & Seq
Reverse (-)
4232569 .. 4237360
4792 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010771

Sequence Viewer

Length: 1629 bp
ATGGCGCGTTACATCCAACGCGCCACCCTCATATCCATCACCCCCATTCCCATCCGAAACACCACCCCTAGACCGAATTCAATCCTCCCTCCCCAACCGCACCGTTTCGACGCCTCCAAAGCCTCGCTCTTCTTCCGCCGGAGATTCCACGCCCTCTGCGGCGGCGACTGGAGAGCTCGTCCGAGACCGTCGTTACGCATCTGTGCTGCGCAGAGAAACTACCGGAAAGTGAGGCGGCGAGCCCCGAAGAGCAAGGACAAGGAGCTCGAGCTCAACGTCAGCATTTGCATCGAAGAAGAGTTGCCTGACGATCCTGAAATCCTTGGGATAGCGGAATTGCTCAGAGTTAATGTTCCGATGGCAATGAAGCTAGCGTTTGATGGCTTGAAAGATTCCGAGTATAAGACCAGGGACGATGGCATCAGTGACGTCGGAGGGTTTCAGAGTGTGGAGCTTTCGGTGATGCTTTGCAATGACGAGTTTATCCGAAAGCTTAACAAAGAATGGAGAGATGAGGACCATGCTACTGATGTGCTTTCAATGTCACAACATGTCCCTGAGCTTAGGCTTCCCATTGAGGTACATTTGATACATGGATTGTTGCATCTACTAGGATTTGATCATGAGATTAGCGAAGAAGCTGAAGTGGAAATGGAGAAGGAGGAGGAGCTTCTCTTGAAGAGCCTTGGGTGGACGGGAAAAGGATTGATTCAGAGTGTGTCCAATGCTGAAATCAATGCAATTTCCCATGAGGAGAAACAGGATGACAGGAAGAGAGAAGGCAGCCTTCGATATTATAAGCCAAAGTTCAAATATATTTTCTGCGATATGGATGGCACCCTTCTCAACAGTAAAACTCAAATCAGTTCAACAACTGCAAAGGCTCTTAAAGAGGTCTCATCAAGGGGTGTGAAAATAGTGATAGCAACAGGAAAAACTCGCTCAGCTGTGATCAACATTTTTAAAATGGTAGACTTGGCAGGAAGAGATGGCATTGTTTCAGAATTTTCTCCTGGGGTTTTCTGCCAGGGATTGCTTGTTTATGGTAAGCAAGGTCGGGAAATCTTTAAAGGGAATTTAGATCCAAATGTCTGCAGAGAGGCGTGTGTTTACTCTTGGGAGAATAGGATACCTCTTATTGCTTACAGTGAGGACCGTTGCTTCACTCTATTTGACCACCCACTAGTTGACTCACTACATACTGTATATCATGAGCCAAAGGGGGAGATCATGCCTTCAGTTGAGCATCTCTTGGCTGCTGGTGACATACAGAAAGTAATCTTCATGGACACTGCCGAAGGAGTCGCAACTACTTTGAGGCCATACTGGTCAGGAGCAATTAGAGATCGTGCGGCAGTTGTTCAAGCTCAGCCGGACATGCTTGAAATTGTCCCTCCGGGGACCTCAAAAGGGGGTGGAGTAAAATTGCTGCTTGATCATTTGGGCATCACTCCAAAGGAGATCATGGCTATTGGCGATGGAGAAAATGACATTGAGATGCTTGAACTAGCTTCTTTGGGTGTTGCTCTTAGCAATGGTTCAGAGAAAACAAAAGCTGTGGCTAATTTAATTGGTGCCAGTAACGACGAAGATGGTGCAGCTGATGCGATCTACCGGTATGCATTTTGA

Protein Analysis

543

Amino Acids

60.51

Weight (kDa)

5.87

Isoelectric Point (pI)

38.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
YbeY PF02130 148 - 183 6.9e-07 Endoribonuclease YbeY
YbeY PF02130 194 - 228 8e-07 Endoribonuclease YbeY
Hydrolase_3 PF08282 273 - 537 4.6e-52 haloacid dehalogenase-like hydrolase
S6PP PF05116 453 - 516 8.1e-09 Sucrose-6F-phosphate phosphohydrolase
Hydrolase PF00702 463 - 504 9e-06 haloacid dehalogenase-like hydrolase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 798
AatII GACGTC 1 cut(s) 432
Acc16I TGCGCA 1 cut(s) 210
AccB1I GGYRCC 2 cut(s) 836, 1574
AccI GTMKAC 1 cut(s) 972
AccII CGCG 2 cut(s) 7, 21
AciI CCGC 7 cut(s) 98, 136, 159, 162, 235, 332, 1352
AclWI GGATC 2 cut(s) 305, 1076
AcsI RAATTY 3 cut(s) 76, 1004, 1075
AcuI CTGAAG 2 cut(s) 663, 1221
AcyI GRCGYC 2 cut(s) 111, 429
AfaI GTAC 1 cut(s) 582
AfiI CCNNNNNNNGG 1 cut(s) 1410
AflIII ACRYGT 1 cut(s) 550
AgeI ACCGGT 1 cut(s) 1614
AgsI TTSAA 9 cut(s) 81, 388, 540, 679, 811, 870, 1364, 1385, 1505
AhlI ACTAGT 1 cut(s) 1183
AjnI CCWGG 3 cut(s) 407, 1012, 1026
Alw21I GWGCWC 3 cut(s) 178, 267, 273
Alw26I GTCTC 2 cut(s) 178, 901
AlwI GGATC 2 cut(s) 305, 1076
Ama87I CYCGRG 1 cut(s) 266
AoxI GGCC 1 cut(s) 1319
ApeKI GCWGC 5 cut(s) 206, 783, 1256, 1429, 1598
ApoI RAATTY 3 cut(s) 76, 1004, 1075
AsiGI ACCGGT 1 cut(s) 1614
AspLEI GCGC 3 cut(s) 7, 23, 211
AspS9I GGNCC 3 cut(s) 517, 1153, 1401
AsuC2I CCSGG 1 cut(s) 1398
AsuHPI GGTGA 3 cut(s) 31, 472, 1274
AsuNHI GCTAGC 1 cut(s) 370
AvaI CYCGRG 1 cut(s) 266
AvaII GGWCC 3 cut(s) 517, 1153, 1401
BanI GGYRCC 2 cut(s) 836, 1574
BanII GRGCYC 4 cut(s) 178, 244, 267, 273
Bbv12I GWGCWC 3 cut(s) 178, 267, 273
BbvI GCAGC 5 cut(s) 193, 795, 1243, 1416, 1610
BccI CCATC 9 cut(s) 44, 59, 352, 374, 410, 827, 983, 1472, 1586
BcgI CGANNNNNNTGC 4 cut(s) 271, 305, 1577, 1611
BciT130I CCWGG 3 cut(s) 409, 1014, 1028
BciVI GTATCC 1 cut(s) 1122
BclI TGATCA 3 cut(s) 619, 951, 1435
BcnI CCSGG 1 cut(s) 1398
BcoDI GTCTC 2 cut(s) 178, 901
BcuI ACTAGT 1 cut(s) 1183
BfaI CTAG 5 cut(s) 69, 371, 611, 1184, 1508
BfmI CTRYAG 1 cut(s) 1093
BfuI GTATCC 1 cut(s) 1122
BisI GCNGC 9 cut(s) 160, 163, 207, 236, 784, 1257, 1353, 1430, 1599
BlpI GCTNAGC 2 cut(s) 943, 1368
BlsI GCNGC 9 cut(s) 161, 164, 208, 237, 785, 1258, 1354, 1431, 1600
Bme1390I CCNGG 4 cut(s) 409, 1014, 1028, 1398
Bme18I GGWCC 3 cut(s) 517, 1153, 1401
BmeT110I CYCGRG 1 cut(s) 266
BmgT120I GGNCC 3 cut(s) 517, 1153, 1401
BmiI GGNNCC 3 cut(s) 838, 1402, 1576
BmrFI CCNGG 4 cut(s) 409, 1014, 1028, 1398
BmsI GCATC 9 cut(s) 207, 297, 429, 453, 613, 1255, 1455, 1488, 1594
BmtI GCTAGC 1 cut(s) 374
BpmI CTGGAG 1 cut(s) 190
Bpu10I CCTNAGC 2 cut(s) 558, 563
Bpu1102I GCTNAGC 2 cut(s) 943, 1368
BpuMI CCSGG 1 cut(s) 1398
BsaHI GRCGYC 2 cut(s) 111, 429
BsaI GGTCTC 2 cut(s) 178, 901
BsaJI CCNNGG 6 cut(s) 322, 408, 685, 1013, 1027, 1397
BsaWI WCCGGW 2 cut(s) 222, 1614
BsaXI ACNNNNNCTCC 2 cut(s) 163, 193
Bsc4I CCNNNNNNNGG 1 cut(s) 1410
Bse118I RCCGGY 1 cut(s) 1614
Bse1I ACTGG 3 cut(s) 173, 1331, 1578
Bse3DI GCAATG 3 cut(s) 369, 478, 1540
BseBI CCWGG 3 cut(s) 409, 1014, 1028
BseDI CCNNGG 6 cut(s) 322, 408, 685, 1013, 1027, 1397
BseGI GGATG 4 cut(s) 12, 51, 769, 838
BseLI CCNNNNNNNGG 1 cut(s) 1410
BseMI GCAATG 3 cut(s) 369, 478, 1540
BseMII CTCAG 4 cut(s) 355, 549, 957, 1382
BseNI ACTGG 3 cut(s) 173, 1331, 1578
BseRI GAGGAG 3 cut(s) 677, 680, 767
BseXI GCAGC 5 cut(s) 193, 795, 1243, 1416, 1610
BsgI GTGCAG 1 cut(s) 1617
Bsh1236I CGCG 2 cut(s) 7, 21
BshFI GGCC 1 cut(s) 1321
BshNI GGYRCC 2 cut(s) 836, 1574
BshTI ACCGGT 1 cut(s) 1614
BsiHKAI GWGCWC 3 cut(s) 178, 267, 273
BsiHKCI CYCGRG 1 cut(s) 266
BsiSI CCGG 5 cut(s) 139, 223, 1373, 1397, 1615
BslFI GGGAC 4 cut(s) 425, 539, 1376, 1414
BslI CCNNNNNNNGG 1 cut(s) 1410
BsmAI GTCTC 2 cut(s) 178, 901
BsmFI GGGAC 4 cut(s) 425, 539, 1376, 1414
BsnI GGCC 1 cut(s) 1321
Bso31I GGTCTC 2 cut(s) 178, 901
BsoBI CYCGRG 1 cut(s) 266
Bsp1286I GDGCHC 4 cut(s) 178, 244, 267, 273
Bsp143I GATC 9 cut(s) 310, 619, 951, 1081, 1227, 1345, 1435, 1461, 1608
Bsp1720I GCTNAGC 2 cut(s) 943, 1368
BspACI CCGC 7 cut(s) 98, 136, 159, 162, 235, 332, 1352
BspANI GGCC 1 cut(s) 1321
BspCNI CTCAG 4 cut(s) 354, 550, 956, 1381
BspFNI CGCG 2 cut(s) 7, 21
BspHI TCATGA 2 cut(s) 622, 1210
BspLI GGNNCC 3 cut(s) 838, 1402, 1576
BspMAI CTGCAG 1 cut(s) 1097
BspOI GCTAGC 1 cut(s) 374
BspPI GGATC 2 cut(s) 305, 1076
BspQI GCTCTTC 3 cut(s) 134, 242, 674
BspT107I GGYRCC 2 cut(s) 836, 1574
BspTNI GGTCTC 2 cut(s) 178, 901
BsrDI GCAATG 3 cut(s) 369, 478, 1540
BsrFI RCCGGY 1 cut(s) 1614
BsrI ACTGG 3 cut(s) 173, 1331, 1578
BssAI RCCGGY 1 cut(s) 1614
BssECI CCNNGG 6 cut(s) 322, 408, 685, 1013, 1027, 1397
BssMI GATC 9 cut(s) 310, 619, 951, 1081, 1227, 1345, 1435, 1461, 1608
BssNI GRCGYC 2 cut(s) 111, 429
BssT1I CCWWGG 2 cut(s) 322, 685
Bst2UI CCWGG 3 cut(s) 409, 1014, 1028
Bst4CI ACNGT 6 cut(s) 104, 189, 851, 1148, 1157, 1204
Bst6I CTCTTC 6 cut(s) 134, 242, 291, 674, 767, 979
BstACI GRCGYC 2 cut(s) 111, 429
BstAPI GCANNNNNTGC 1 cut(s) 1604
BstC8I GCNNGC 2 cut(s) 240, 372
BstDEI CTNAG 6 cut(s) 341, 558, 563, 943, 1368, 1529
BstF5I GGATG 4 cut(s) 12, 51, 769, 838
BstFNI CGCG 2 cut(s) 7, 21
BstHHI GCGC 3 cut(s) 7, 23, 211
BstKTI GATC 9 cut(s) 313, 622, 954, 1084, 1230, 1348, 1438, 1464, 1611
BstMAI GTCTC 2 cut(s) 178, 901
BstMBI GATC 9 cut(s) 310, 619, 951, 1081, 1227, 1345, 1435, 1461, 1608
BstMWI GCNNNNNNNGC 3 cut(s) 119, 1378, 1604
BstNI CCWGG 3 cut(s) 409, 1014, 1028
BstNSI RCATGY 2 cut(s) 554, 1381
BstSCI CCNGG 4 cut(s) 407, 1012, 1026, 1396
BstSFI CTRYAG 1 cut(s) 1093
BstUI CGCG 2 cut(s) 7, 21
BstV1I GCAGC 5 cut(s) 193, 795, 1243, 1416, 1610
BstX2I RGATCY 1 cut(s) 1081
BstYI RGATCY 1 cut(s) 1081
BsuI GTATCC 1 cut(s) 1122
BsuRI GGCC 1 cut(s) 1321
BtgZI GCGATG 1 cut(s) 1491
BtsCI GGATG 4 cut(s) 12, 51, 769, 838
BtsI GCAGTG 1 cut(s) 1290
BtsIMutI CAGTG 3 cut(s) 430, 1153, 1290
Cac8I GCNNGC 2 cut(s) 240, 372
CciI TCATGA 2 cut(s) 622, 1210
CfoI GCGC 3 cut(s) 7, 23, 211
Cfr10I RCCGGY 1 cut(s) 1614
Cfr13I GGNCC 3 cut(s) 517, 1153, 1401
CseI GACGC 1 cut(s) 119
Csp6I GTAC 1 cut(s) 581
CspAI ACCGGT 1 cut(s) 1614
CspCI CAANNNNNGTGG 2 cut(s) 1539, 1574
CviQI GTAC 1 cut(s) 581
DdeI CTNAG 6 cut(s) 341, 558, 563, 943, 1368, 1529
DpnI GATC 9 cut(s) 312, 621, 953, 1083, 1229, 1347, 1437, 1463, 1610
DpnII GATC 9 cut(s) 310, 619, 951, 1081, 1227, 1345, 1435, 1461, 1608
DraI TTTAAA 2 cut(s) 964, 1069
Eam1104I CTCTTC 6 cut(s) 134, 242, 291, 674, 767, 979
EarI CTCTTC 6 cut(s) 134, 242, 291, 674, 767, 979
EciI GGCGGA 1 cut(s) 125
Ecl136II GAGCTC 3 cut(s) 176, 265, 271
Eco130I CCWWGG 2 cut(s) 322, 685
Eco24I GRGCYC 4 cut(s) 178, 244, 267, 273
Eco31I GGTCTC 2 cut(s) 178, 901
Eco47I GGWCC 3 cut(s) 517, 1153, 1401
Eco53kI GAGCTC 3 cut(s) 176, 265, 271
Eco57I CTGAAG 2 cut(s) 663, 1221
Eco88I CYCGRG 1 cut(s) 266
EcoICRI GAGCTC 3 cut(s) 176, 265, 271
EcoO109I RGGNCCY 1 cut(s) 1401
EcoRI GAATTC 1 cut(s) 76
EcoRII CCWGG 3 cut(s) 407, 1012, 1026
EcoT14I CCWWGG 2 cut(s) 322, 685
EcoT22I ATGCAT 1 cut(s) 1624
EcoT38I GRGCYC 4 cut(s) 178, 244, 267, 273
ErhI CCWWGG 2 cut(s) 322, 685
FalI AAGNNNNNCTT 2 cut(s) 771, 803
FaqI GGGAC 4 cut(s) 425, 539, 1376, 1414
FbaI TGATCA 3 cut(s) 619, 951, 1435
FblI GTMKAC 1 cut(s) 972
Fnu4HI GCNGC 9 cut(s) 160, 163, 207, 236, 784, 1257, 1353, 1430, 1599
FokI GGATG 3 cut(s) 38, 776, 845
FriOI GRGCYC 4 cut(s) 178, 244, 267, 273
Fsp4HI GCNGC 9 cut(s) 160, 163, 207, 236, 784, 1257, 1353, 1430, 1599
FspBI CTAG 5 cut(s) 69, 371, 611, 1184, 1508
FspI TGCGCA 1 cut(s) 210
GlaI GCGC 3 cut(s) 6, 22, 210
GluI GCNGC 9 cut(s) 160, 163, 207, 236, 784, 1257, 1353, 1430, 1599
GsuI CTGGAG 1 cut(s) 190
HaeIII GGCC 1 cut(s) 1321
HapII CCGG 5 cut(s) 139, 223, 1373, 1397, 1615
HgaI GACGC 1 cut(s) 119
HhaI GCGC 3 cut(s) 7, 23, 211
Hin1I GRCGYC 2 cut(s) 111, 429
Hin6I GCGC 3 cut(s) 5, 21, 209
HinP1I GCGC 3 cut(s) 5, 21, 209
HincII GTYRAC 1 cut(s) 1189
HindII GTYRAC 1 cut(s) 1189
HindIII AAGCTT 1 cut(s) 491
HinfI GANTC 5 cut(s) 144, 392, 709, 1190, 1302
HpaII CCGG 5 cut(s) 139, 223, 1373, 1397, 1615
HphI GGTGA 3 cut(s) 31, 472, 1274
Hpy166II GTNNAC 4 cut(s) 693, 973, 1111, 1189
Hpy188III TCNNGA 6 cut(s) 314, 623, 676, 1058, 1211, 1332
Hpy8I GTNNAC 4 cut(s) 693, 973, 1111, 1189
Hpy99I CGWCG 4 cut(s) 113, 193, 434, 1589
HpyAV CCTTC 6 cut(s) 652, 773, 797, 851, 1245, 1292
HpyCH4III ACNGT 6 cut(s) 104, 189, 851, 1148, 1157, 1204
HpyCH4IV ACGT 2 cut(s) 276, 429
HpyCH4V TGCA 8 cut(s) 288, 471, 604, 740, 878, 1095, 1598, 1622
HpyF10VI GCNNNNNNNGC 3 cut(s) 119, 1378, 1604
HpyF3I CTNAG 6 cut(s) 341, 558, 563, 943, 1368, 1529
HpySE526I ACGT 2 cut(s) 276, 429
Hsp92I GRCGYC 2 cut(s) 111, 429
HspAI GCGC 3 cut(s) 5, 21, 209
Ksp22I TGATCA 3 cut(s) 619, 951, 1435
Kzo9I GATC 9 cut(s) 310, 619, 951, 1081, 1227, 1345, 1435, 1461, 1608
LguI GCTCTTC 3 cut(s) 134, 242, 674
LmnI GCTCC 4 cut(s) 262, 451, 667, 1334
Lsp1109I GCAGC 5 cut(s) 193, 795, 1243, 1416, 1610
LweI GCATC 9 cut(s) 207, 297, 429, 453, 613, 1255, 1455, 1488, 1594
MaeI CTAG 5 cut(s) 69, 371, 611, 1184, 1508
MaeII ACGT 2 cut(s) 276, 429
MaeIII GTNAC 6 cut(s) 8, 192, 425, 543, 1262, 1580
MalI GATC 9 cut(s) 312, 621, 953, 1083, 1229, 1347, 1437, 1463, 1610
MboI GATC 9 cut(s) 310, 619, 951, 1081, 1227, 1345, 1435, 1461, 1608
MflI RGATCY 1 cut(s) 1081
MhlI GDGCHC 4 cut(s) 178, 244, 267, 273
MlyI GAGTC 2 cut(s) 1184, 1311
MmeI TCCRAC 2 cut(s) 40, 412
Mph1103I ATGCAT 1 cut(s) 1624
MseI TTAA 6 cut(s) 348, 495, 888, 963, 1068, 1568
MslI CAYNNNNRTG 1 cut(s) 1496
MspA1I CMGCKG 2 cut(s) 947, 1601
MspI CCGG 5 cut(s) 139, 223, 1373, 1397, 1615
MspR9I CCNGG 4 cut(s) 409, 1014, 1028, 1398
MvaI CCWGG 3 cut(s) 409, 1014, 1028
MvnI CGCG 2 cut(s) 7, 21
MwoI GCNNNNNNNGC 3 cut(s) 119, 1378, 1604
NciI CCSGG 1 cut(s) 1398
NdeII GATC 9 cut(s) 310, 619, 951, 1081, 1227, 1345, 1435, 1461, 1608
NheI GCTAGC 1 cut(s) 370
NlaIV GGNNCC 3 cut(s) 838, 1402, 1576
NmuCI GTSAC 3 cut(s) 425, 543, 1262
NsbI TGCGCA 1 cut(s) 210
NsiI ATGCAT 1 cut(s) 1624
NspI RCATGY 2 cut(s) 554, 1381
PaeR7I CTCGAG 1 cut(s) 266
PagI TCATGA 2 cut(s) 622, 1210
PciI ACATGT 1 cut(s) 550
PciSI GCTCTTC 3 cut(s) 134, 242, 674
PcsI WCGNNNNNNNCGW 1 cut(s) 273
PfeI GAWTC 3 cut(s) 144, 392, 709
PinAI ACCGGT 1 cut(s) 1614
PkrI GCNGC 9 cut(s) 161, 164, 208, 237, 785, 1258, 1354, 1431, 1600
PleI GAGTC 2 cut(s) 1184, 1310
PpsI GAGTC 2 cut(s) 1184, 1310
PpuMI RGGWCCY 1 cut(s) 1401
PscI ACATGT 1 cut(s) 550
PsiI TTATAA 1 cut(s) 798
Psp124BI GAGCTC 3 cut(s) 178, 267, 273
Psp5II RGGWCCY 1 cut(s) 1401
Psp6I CCWGG 3 cut(s) 407, 1012, 1026
PspGI CCWGG 3 cut(s) 407, 1012, 1026
PspN4I GGNNCC 3 cut(s) 838, 1402, 1576
PspPI GGNCC 3 cut(s) 517, 1153, 1401
PspPPI RGGWCCY 1 cut(s) 1401
PspXI VCTCGAGB 1 cut(s) 266
PstI CTGCAG 1 cut(s) 1097
PsuI RGATCY 1 cut(s) 1081
PvuII CAGCTG 2 cut(s) 947, 1601
RsaI GTAC 1 cut(s) 582
RsaNI GTAC 1 cut(s) 581
RseI CAYNNNNRTG 1 cut(s) 1496
SacI GAGCTC 3 cut(s) 178, 267, 273
SapI GCTCTTC 3 cut(s) 134, 242, 674
SaqAI TTAA 6 cut(s) 348, 495, 888, 963, 1068, 1568
SatI GCNGC 9 cut(s) 160, 163, 207, 236, 784, 1257, 1353, 1430, 1599
Sau3AI GATC 9 cut(s) 310, 619, 951, 1081, 1227, 1345, 1435, 1461, 1608
Sau96I GGNCC 3 cut(s) 517, 1153, 1401
SchI GAGTC 2 cut(s) 1184, 1311
ScrFI CCNGG 4 cut(s) 409, 1014, 1028, 1398
SduI GDGCHC 4 cut(s) 178, 244, 267, 273
SfaNI GCATC 9 cut(s) 207, 297, 429, 453, 613, 1255, 1455, 1488, 1594
SfcI CTRYAG 1 cut(s) 1093
Sfr274I CTCGAG 1 cut(s) 266
SinI GGWCC 3 cut(s) 517, 1153, 1401
SlaI CTCGAG 1 cut(s) 266
SmiMI CAYNNNNRTG 1 cut(s) 1496
SmlI CTYRAG 1 cut(s) 266
SmoI CTYRAG 1 cut(s) 266
SpeI ACTAGT 1 cut(s) 1183
SsiI CCGC 7 cut(s) 98, 136, 159, 162, 235, 332, 1352
SspMI CTAG 5 cut(s) 69, 371, 611, 1184, 1508
SstI GAGCTC 3 cut(s) 178, 267, 273
StyD4I CCNGG 4 cut(s) 407, 1012, 1026, 1396
StyI CCWWGG 2 cut(s) 322, 685
TaaI ACNGT 6 cut(s) 104, 189, 851, 1148, 1157, 1204
TaiI ACGT 2 cut(s) 279, 432
TaqI TCGA 4 cut(s) 108, 267, 291, 790
TaqII GACCGA 1 cut(s) 88
TauI GCSGC 4 cut(s) 162, 165, 238, 1355
TfiI GAWTC 3 cut(s) 144, 392, 709
Tru1I TTAA 6 cut(s) 348, 495, 888, 963, 1068, 1568
Tru9I TTAA 6 cut(s) 348, 495, 888, 963, 1068, 1568
TscAI CASTG 3 cut(s) 430, 1153, 1297
TseFI GTSAC 3 cut(s) 425, 543, 1262
TseI GCWGC 5 cut(s) 206, 783, 1256, 1429, 1598
Tsp45I GTSAC 3 cut(s) 425, 543, 1262
TspDTI ATGAA 2 cut(s) 380, 1273
TspRI CASTG 3 cut(s) 430, 1153, 1297
VpaK11BI GGWCC 3 cut(s) 517, 1153, 1401
XapI RAATTY 3 cut(s) 76, 1004, 1075
XceI RCATGY 2 cut(s) 554, 1381
XhoI CTCGAG 1 cut(s) 266
XmiI GTMKAC 1 cut(s) 972
XspI CTAG 5 cut(s) 69, 371, 611, 1184, 1508
ZraI GACGTC 1 cut(s) 430
Zsp2I ATGCAT 1 cut(s) 1624
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.