Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0003247

Physical Location & Seq

Genomic Coordinates Forward (+)

64673281 .. 64677805

Gene Structure 4525 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG464200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1788 bp

ATGCTCCTCCATCTCTCTACTCTCCTCCGCGCCATCCATTCTACCCGCCCAATGGCGCGTTACATCCCACGCGCCAGTCTCATATCCATCACCCCCATTCCCATCCGAAACACCACCCCCAGACCGAATTCAATCCTCCCTCCCCAACCGCACCGTTTCGACGCCTCCAAAGCCTCGCTCTTCTTCGGCCGGAGATTCCACGCCCTCTGCGGCGGCGACTGGAGAGCTCGTCCGAGACCGTCGTTACGCATCTGTGCTGCGCAGAGAGACTACCGGAAAGTGAGGCGGCGAGCCCCGAAGAGCAAGGACAAGGAGCTCGAGCTCAACGTCAGCATTTGCATCGAAGAAGAGTTGCCTGACGATCCTGAAATCCTTGGGATAGCGGAGTTGCTCAGGATTAATGTTCCGATGGCAATGAAGCTAGCGTTTGATGGCTTGAAAGATTCGGAGTATAAGACCAGGGACGATGGCATTAGTGACGTCGGAGGGTTTCAGAGCGTGGAGCTTTCGGTGATGCTCTGCAATGACGAGTTTATCCGAAAGCTTAACAAAGAATGGAGAGATGAGGACCATGCTACTGATGTGCTTTCAATGTCACAACATGTCCCTGAGCTTAGGCTTCCCATTCTTATGTTGGGTGACGTTGTGATTTCTGTTGAGACTGCGGCTAGACAAGCAGAAGAAAGAGGACATACGATTCTTGACGAGATACGTATTCTCATGATACATGGATTGCTGCATCTATTAGGATTTGATCATGAGATTAGCGAAGAAGCCGAAAAGGAAATGGAGAAGGAGGAGGAGCTTCTCTTGAAGAGCCTTGGGTGGACGGGAAAAGGATTGATTCAGAGTGCGTCCAGTGCTGAAATCAATGCAATTTCCCATGAGGAGAAACAGGATGGAAGAGAGAAGGCAGCCTTCGATACTATAAACCAAAGTTCAAATATATATTCTGCGATATGGATGCCTTATGTGTATTCTCTTGGTATACAAGGCACCCTTCTCAACAGTAAAACTCAAATCAGTTCAACAACTGCAAAGGCTCTTAAAGAGGTCTCATCAAGGGGTGTGAAAATAGTGATAGCAACAGGAAAAACTCGCTCAGCTGTGATCAACATTTTTAAAATGGTAGACTTGGCAGGAAAAGATGGCATTGTTTCAGAATTTTCTACTGGGGTTTTCTGCCAGGGATTGCTTGTTTATGGTAAGCAAGGTCGGGAAATCTTTAAAGGGAATTTAGATCCAAATGTCTGCAGAGAGGCGTGTCTTTACTCTTGGGAGAATAGGATACCTCTTATTGCTTACAGTGAGGATCGTTGCTTCACTCTATTTGACCACCCACTAGTTGACTCACTACATACTGTATATCATGAGCCAAAGGGGGAGATCATGCCTTCAGTTGAGCATCTCTTGGCTGCTGGTGACATACAGAAAGTAATCTTCATGGACACTGCCGAAGGAGTCGCAACTACTTTGAGGCCATACTGGTCAGGAGCAATTAGAGATCGTGCAGCAGTTGTTCAAGCTCAGCCGGACATGCTTGAAATTGTCCCTCCGGGGACCTCAAAAGGGAGTGGTGTAAAATTGCTGCTTGATCATTTGGGCATCACTCCAAAGGAGATCATGGCTATTGGCGATGGAGAAAATGACATTGAGATGCTTGAACTAGCTTCTTTGGGTGTTGCTCTTAGCAATGGTTCAGAGAAAACAAAAGCTGTGGCTAATTTAATTGGTGCCAGTAACGACGAAGATGGTGCAGCTGATGCGATCTACCGGTATGCATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000287 GO:0003674 GO:0003824 GO:0005488 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019203 GO:0042578 GO:0043167 GO:0043169 GO:0044237 GO:0046872 GO:0050308

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Hydrolase_3 UPF0054

Protein Analysis

595

Amino Acids

65.97

Weight (kDa)

5.68

Isoelectric Point (pI)

38.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
YbeY	PF02130	165 - 273	1e-32	Endoribonuclease YbeY
Hydrolase_3	PF08282	331 - 590	1e-47	haloacid dehalogenase-like hydrolase
S6PP	PF05116	506 - 569	4.6e-09	Sucrose-6F-phosphate phosphohydrolase
Hydrolase	PF00702	515 - 557	3.1e-06	haloacid dehalogenase-like hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003247)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25870
fragaria_vesca	FvH4_2g35220 FvH4_2g35230
malus_domestica	MD08G1110200.v1.1 MD08G1110300.v1.1
prunus_persica	Prupe.1G444400_v2.0.a1 Prupe.1G444400_v2.0.a1 Prupe.1G444400_v2.0.a1 Prupe.1G444400_v2.0.a1 Prupe.1G444400_v2.0.a1 Prupe.1G444500_v2.0.a1 Prupe.1G444500_v2.0.a1 Prupe.1G444500_v2.0.a1
pyrus_communis	pycom08g09180 pycom15g08410
rosa_chinensis	RchiOBHm_Chr6g0306701 RchiOBHm_Chr6g0306711
rosa_laevigata	RLG00000010771 RLG00000010772
rosa_multiflora	Rmu_sc0005201.1_g000001 Rmu_sc0017725.1_g000001 Rmu_sc0017785.1_g000007 Rmu_sc0017785.1_g000008 Rmu_sc0017786.1_g000007
rosa_roxburghii	Rroxscaffold_7G00161520 Rroxscaffold_7G00161530
rosa_rugosa	Rorug06G0351700 Rorug06G0351700
rosa_samantha	Rh6AG464100 Rh6AG464200 Rh6BG436800 Rh6BG436900 Rh6CG478300 Rh6DG465000 Rh6DG465100
rosa_wichuraiana	Rw6G040430 Rw6G040440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	483
Acc16I	TGCGCA	1 cut(s)	261
AccB1I	GGYRCC	2 cut(s)	995, 1733
AccI	GTMKAC	2 cut(s)	988, 1131
AccII	CGCG	3 cut(s)	30, 58, 72
AciI	CCGC	8 cut(s)	28, 46, 149, 210, 213, 286, 383, 665
AclWI	GGATC	3 cut(s)	356, 1235, 1320
AcoI	YGGCCR	1 cut(s)	187
AcsI	RAATTY	3 cut(s)	127, 1163, 1234
AcuI	CTGAAG	1 cut(s)	1380
AcyI	GRCGYC	2 cut(s)	162, 480
AfiI	CCNNNNNNNGG	2 cut(s)	52, 1569
AflIII	ACRYGT	1 cut(s)	601
AgeI	ACCGGT	1 cut(s)	1773
AgsI	TTSAA	9 cut(s)	132, 439, 591, 814, 942, 1029, 1523, 1544, 1664
AhlI	ACTAGT	1 cut(s)	1342
AjnI	CCWGG	2 cut(s)	458, 1185
Alw21I	GWGCWC	3 cut(s)	229, 318, 324
Alw26I	GTCTC	5 cut(s)	83, 229, 261, 653, 1060
AlwI	GGATC	3 cut(s)	356, 1235, 1320
Ama87I	CYCGRG	1 cut(s)	317
AoxI	GGCC	2 cut(s)	187, 1478
ApeKI	GCWGC	7 cut(s)	257, 736, 914, 1415, 1511, 1588, 1757
ApoI	RAATTY	3 cut(s)	127, 1163, 1234
AseI	ATTAAT	1 cut(s)	399
AsiGI	ACCGGT	1 cut(s)	1773
AspLEI	GCGC	4 cut(s)	32, 58, 74, 262
AspS9I	GGNCC	2 cut(s)	568, 1560
AsuC2I	CCSGG	1 cut(s)	1557
AsuHPI	GGTGA	4 cut(s)	82, 523, 650, 1433
AsuNHI	GCTAGC	1 cut(s)	421
AvaI	CYCGRG	1 cut(s)	317
AvaII	GGWCC	2 cut(s)	568, 1560
BanI	GGYRCC	2 cut(s)	995, 1733
BanII	GRGCYC	4 cut(s)	229, 295, 318, 324
Bbv12I	GWGCWC	3 cut(s)	229, 318, 324
BbvI	GCAGC	7 cut(s)	244, 723, 926, 1402, 1523, 1575, 1769
BcgI	CGANNNNNNTGC	6 cut(s)	322, 356, 946, 980, 1736, 1770
BciT130I	CCWGG	2 cut(s)	460, 1187
BciVI	GTATCC	1 cut(s)	1281
BclI	TGATCA	3 cut(s)	754, 1110, 1594
BcnI	CCSGG	1 cut(s)	1557
BcoDI	GTCTC	5 cut(s)	83, 229, 261, 653, 1060
BcuI	ACTAGT	1 cut(s)	1342
BfaI	CTAG	4 cut(s)	422, 669, 1343, 1667
BfmI	CTRYAG	1 cut(s)	1252
BfuI	GTATCC	1 cut(s)	1281
BlpI	GCTNAGC	2 cut(s)	1102, 1527
Bme1390I	CCNGG	3 cut(s)	460, 1187, 1557
Bme18I	GGWCC	2 cut(s)	568, 1560
BmeT110I	CYCGRG	1 cut(s)	317
BmgT120I	GGNCC	2 cut(s)	568, 1560
BmiI	GGNNCC	3 cut(s)	997, 1561, 1735
BmrFI	CCNGG	3 cut(s)	460, 1187, 1557
BmrI	ACTGGG	1 cut(s)	1182
BmsI	GCATC	9 cut(s)	258, 348, 504, 748, 954, 1414, 1614, 1647, 1753
BmtI	GCTAGC	1 cut(s)	425
BmuI	ACTGGG	1 cut(s)	1182
BpmI	CTGGAG	1 cut(s)	241
Bpu10I	CCTNAGC	3 cut(s)	392, 609, 614
Bpu1102I	GCTNAGC	2 cut(s)	1102, 1527
BpuMI	CCSGG	1 cut(s)	1557
BsaAI	YACGTR	1 cut(s)	713
BsaHI	GRCGYC	2 cut(s)	162, 480
BsaI	GGTCTC	2 cut(s)	229, 1060
BsaJI	CCNNGG	5 cut(s)	373, 459, 820, 1186, 1556
BsaWI	WCCGGW	2 cut(s)	273, 1773
BsaXI	ACNNNNNCTCC	2 cut(s)	214, 244
Bsc4I	CCNNNNNNNGG	2 cut(s)	52, 1569
Bse118I	RCCGGY	1 cut(s)	1773
Bse1I	ACTGG	6 cut(s)	75, 224, 858, 1177, 1490, 1737
Bse3DI	GCAATG	3 cut(s)	420, 529, 1699
BseBI	CCWGG	2 cut(s)	460, 1187
BseDI	CCNNGG	5 cut(s)	373, 459, 820, 1186, 1556
BseGI	GGATG	5 cut(s)	33, 63, 102, 904, 969
BseLI	CCNNNNNNNGG	2 cut(s)	52, 1569
BseMI	GCAATG	3 cut(s)	420, 529, 1699
BseMII	CTCAG	4 cut(s)	406, 600, 1116, 1541
BseNI	ACTGG	6 cut(s)	75, 224, 858, 1177, 1490, 1737
BseRI	GAGGAG	4 cut(s)	14, 812, 815, 902
BseX3I	CGGCCG	1 cut(s)	187
BseXI	GCAGC	7 cut(s)	244, 723, 926, 1402, 1523, 1575, 1769
BsgI	GTGCAG	2 cut(s)	1530, 1776
Bsh1236I	CGCG	3 cut(s)	30, 58, 72
Bsh1285I	CGRYCG	1 cut(s)	190
BshFI	GGCC	2 cut(s)	189, 1480
BshNI	GGYRCC	2 cut(s)	995, 1733
BshTI	ACCGGT	1 cut(s)	1773
BsiEI	CGRYCG	1 cut(s)	190
BsiHKAI	GWGCWC	3 cut(s)	229, 318, 324
BsiHKCI	CYCGRG	1 cut(s)	317
BsiSI	CCGG	5 cut(s)	190, 274, 1532, 1556, 1774
BslFI	GGGAC	4 cut(s)	476, 590, 1535, 1573
BslI	CCNNNNNNNGG	2 cut(s)	52, 1569
BsmAI	GTCTC	5 cut(s)	83, 229, 261, 653, 1060
BsmFI	GGGAC	4 cut(s)	476, 590, 1535, 1573
BsnI	GGCC	2 cut(s)	189, 1480
Bso31I	GGTCTC	2 cut(s)	229, 1060
BsoBI	CYCGRG	1 cut(s)	317
Bsp1286I	GDGCHC	4 cut(s)	229, 295, 318, 324
Bsp1720I	GCTNAGC	2 cut(s)	1102, 1527
BspACI	CCGC	8 cut(s)	28, 46, 149, 210, 213, 286, 383, 665
BspANI	GGCC	2 cut(s)	189, 1480
BspCNI	CTCAG	4 cut(s)	405, 601, 1115, 1540
BspFNI	CGCG	3 cut(s)	30, 58, 72
BspHI	TCATGA	3 cut(s)	720, 757, 1369
BspLI	GGNNCC	3 cut(s)	997, 1561, 1735
BspMAI	CTGCAG	1 cut(s)	1256
BspOI	GCTAGC	1 cut(s)	425
BspPI	GGATC	3 cut(s)	356, 1235, 1320
BspQI	GCTCTTC	3 cut(s)	185, 293, 809
BspT107I	GGYRCC	2 cut(s)	995, 1733
BspTNI	GGTCTC	2 cut(s)	229, 1060
BsrDI	GCAATG	3 cut(s)	420, 529, 1699
BsrFI	RCCGGY	1 cut(s)	1773
BsrI	ACTGG	6 cut(s)	75, 224, 858, 1177, 1490, 1737
BssAI	RCCGGY	1 cut(s)	1773
BssECI	CCNNGG	5 cut(s)	373, 459, 820, 1186, 1556
BssNAI	GTATAC	1 cut(s)	989
BssNI	GRCGYC	2 cut(s)	162, 480
BssT1I	CCWWGG	2 cut(s)	373, 820
Bst1107I	GTATAC	1 cut(s)	989
Bst2UI	CCWGG	2 cut(s)	460, 1187
Bst4CI	ACNGT	5 cut(s)	155, 240, 1010, 1307, 1363
Bst6I	CTCTTC	5 cut(s)	185, 293, 342, 809, 898
BstACI	GRCGYC	2 cut(s)	162, 480
BstAPI	GCANNNNNTGC	1 cut(s)	1763
BstBAI	YACGTR	1 cut(s)	713
BstC8I	GCNNGC	2 cut(s)	291, 423
BstDEI	CTNAG	6 cut(s)	392, 609, 614, 1102, 1527, 1688
BstF5I	GGATG	5 cut(s)	33, 63, 102, 904, 969
BstFNI	CGCG	3 cut(s)	30, 58, 72
BstHHI	GCGC	4 cut(s)	32, 58, 74, 262
BstMAI	GTCTC	5 cut(s)	83, 229, 261, 653, 1060
BstMCI	CGRYCG	1 cut(s)	190
BstMWI	GCNNNNNNNGC	5 cut(s)	170, 674, 860, 1537, 1763
BstNI	CCWGG	2 cut(s)	460, 1187
BstNSI	RCATGY	2 cut(s)	605, 1540
BstSCI	CCNGG	3 cut(s)	458, 1185, 1555
BstSFI	CTRYAG	1 cut(s)	1252
BstSNI	TACGTA	1 cut(s)	713
BstUI	CGCG	3 cut(s)	30, 58, 72
BstV1I	GCAGC	7 cut(s)	244, 723, 926, 1402, 1523, 1575, 1769
BstX2I	RGATCY	1 cut(s)	1240
BstYI	RGATCY	1 cut(s)	1240
BstZ17I	GTATAC	1 cut(s)	989
BstZI	CGGCCG	1 cut(s)	187
BsuI	GTATCC	1 cut(s)	1281
BsuRI	GGCC	2 cut(s)	189, 1480
BtgZI	GCGATG	1 cut(s)	1650
BtsCI	GGATG	5 cut(s)	33, 63, 102, 904, 969
BtsI	GCAGTG	1 cut(s)	1449
BtsIMutI	CAGTG	3 cut(s)	865, 1312, 1449
Cac8I	GCNNGC	2 cut(s)	291, 423
CciI	TCATGA	3 cut(s)	720, 757, 1369
CfoI	GCGC	4 cut(s)	32, 58, 74, 262
Cfr10I	RCCGGY	1 cut(s)	1773
Cfr13I	GGNCC	2 cut(s)	568, 1560
CseI	GACGC	2 cut(s)	170, 843
CspAI	ACCGGT	1 cut(s)	1773
CspCI	CAANNNNNGTGG	2 cut(s)	1698, 1733
DdeI	CTNAG	6 cut(s)	392, 609, 614, 1102, 1527, 1688
DraI	TTTAAA	2 cut(s)	1123, 1228
EaeI	YGGCCR	1 cut(s)	187
EagI	CGGCCG	1 cut(s)	187
Eam1104I	CTCTTC	5 cut(s)	185, 293, 342, 809, 898
EarI	CTCTTC	5 cut(s)	185, 293, 342, 809, 898
Ecl136II	GAGCTC	3 cut(s)	227, 316, 322
EclXI	CGGCCG	1 cut(s)	187
Eco105I	TACGTA	1 cut(s)	713
Eco130I	CCWWGG	2 cut(s)	373, 820
Eco24I	GRGCYC	4 cut(s)	229, 295, 318, 324
Eco31I	GGTCTC	2 cut(s)	229, 1060
Eco47I	GGWCC	2 cut(s)	568, 1560
Eco52I	CGGCCG	1 cut(s)	187
Eco53kI	GAGCTC	3 cut(s)	227, 316, 322
Eco57I	CTGAAG	1 cut(s)	1380
Eco88I	CYCGRG	1 cut(s)	317
EcoICRI	GAGCTC	3 cut(s)	227, 316, 322
EcoO109I	RGGNCCY	1 cut(s)	1560
EcoRI	GAATTC	1 cut(s)	127
EcoRII	CCWGG	2 cut(s)	458, 1185
EcoT14I	CCWWGG	2 cut(s)	373, 820
EcoT22I	ATGCAT	1 cut(s)	1783
EcoT38I	GRGCYC	4 cut(s)	229, 295, 318, 324
ErhI	CCWWGG	2 cut(s)	373, 820
FalI	AAGNNNNNCTT	4 cut(s)	902, 934, 984, 1016
FaqI	GGGAC	4 cut(s)	476, 590, 1535, 1573
FauI	CCCGC	1 cut(s)	53
FbaI	TGATCA	3 cut(s)	754, 1110, 1594
FblI	GTMKAC	2 cut(s)	988, 1131
FokI	GGATG	5 cut(s)	20, 50, 89, 911, 976
FriOI	GRGCYC	4 cut(s)	229, 295, 318, 324
FspBI	CTAG	4 cut(s)	422, 669, 1343, 1667
FspI	TGCGCA	1 cut(s)	261
GlaI	GCGC	4 cut(s)	31, 57, 73, 261
GsuI	CTGGAG	1 cut(s)	241
HaeIII	GGCC	2 cut(s)	189, 1480
HapII	CCGG	5 cut(s)	190, 274, 1532, 1556, 1774
HgaI	GACGC	2 cut(s)	170, 843
HhaI	GCGC	4 cut(s)	32, 58, 74, 262
Hin1I	GRCGYC	2 cut(s)	162, 480
Hin6I	GCGC	4 cut(s)	30, 56, 72, 260
HinP1I	GCGC	4 cut(s)	30, 56, 72, 260
HincII	GTYRAC	1 cut(s)	1348
HindII	GTYRAC	1 cut(s)	1348
HindIII	AAGCTT	1 cut(s)	542
HinfI	GANTC	6 cut(s)	195, 443, 697, 844, 1349, 1461
HpaII	CCGG	5 cut(s)	190, 274, 1532, 1556, 1774
HphI	GGTGA	4 cut(s)	82, 523, 650, 1433
Hpy166II	GTNNAC	4 cut(s)	828, 989, 1132, 1348
Hpy188III	TCNNGA	9 cut(s)	365, 394, 701, 721, 758, 811, 1217, 1370, 1491
Hpy8I	GTNNAC	4 cut(s)	828, 989, 1132, 1348
Hpy99I	CGWCG	4 cut(s)	164, 244, 485, 1748
HpyAV	CCTTC	6 cut(s)	787, 904, 928, 1010, 1404, 1451
HpyCH4III	ACNGT	5 cut(s)	155, 240, 1010, 1307, 1363
HpyCH4IV	ACGT	4 cut(s)	327, 480, 642, 712
HpyCH4V	TGCA	9 cut(s)	339, 522, 739, 875, 1037, 1254, 1511, 1757, 1781
HpyF10VI	GCNNNNNNNGC	5 cut(s)	170, 674, 860, 1537, 1763
HpyF3I	CTNAG	6 cut(s)	392, 609, 614, 1102, 1527, 1688
HpySE526I	ACGT	4 cut(s)	327, 480, 642, 712
Hsp92I	GRCGYC	2 cut(s)	162, 480
HspAI	GCGC	4 cut(s)	30, 56, 72, 260
Ksp22I	TGATCA	3 cut(s)	754, 1110, 1594
LguI	GCTCTTC	3 cut(s)	185, 293, 809
LmnI	GCTCC	5 cut(s)	9, 313, 502, 802, 1493
Lsp1109I	GCAGC	7 cut(s)	244, 723, 926, 1402, 1523, 1575, 1769
LweI	GCATC	9 cut(s)	258, 348, 504, 748, 954, 1414, 1614, 1647, 1753
MaeI	CTAG	4 cut(s)	422, 669, 1343, 1667
MaeII	ACGT	4 cut(s)	327, 480, 642, 712
MaeIII	GTNAC	7 cut(s)	59, 243, 476, 594, 638, 1421, 1739
MflI	RGATCY	1 cut(s)	1240
MhlI	GDGCHC	4 cut(s)	229, 295, 318, 324
MluCI	AATT	9 cut(s)	127, 876, 1163, 1234, 1497, 1545, 1583, 1723, 1728
MlyI	GAGTC	2 cut(s)	1343, 1470
MmeI	TCCRAC	1 cut(s)	463
Mph1103I	ATGCAT	1 cut(s)	1783
MseI	TTAA	6 cut(s)	399, 546, 1047, 1122, 1227, 1727
MslI	CAYNNNNRTG	2 cut(s)	629, 1655
MspA1I	CMGCKG	2 cut(s)	1106, 1760
MspI	CCGG	5 cut(s)	190, 274, 1532, 1556, 1774
MspR9I	CCNGG	3 cut(s)	460, 1187, 1557
MvaI	CCWGG	2 cut(s)	460, 1187
MvnI	CGCG	3 cut(s)	30, 58, 72
MwoI	GCNNNNNNNGC	5 cut(s)	170, 674, 860, 1537, 1763
NciI	CCSGG	1 cut(s)	1557
NheI	GCTAGC	1 cut(s)	421
NlaIV	GGNNCC	3 cut(s)	997, 1561, 1735
NmuCI	GTSAC	4 cut(s)	476, 594, 638, 1421
NsbI	TGCGCA	1 cut(s)	261
NsiI	ATGCAT	1 cut(s)	1783
NspI	RCATGY	2 cut(s)	605, 1540
PaeR7I	CTCGAG	1 cut(s)	317
PagI	TCATGA	3 cut(s)	720, 757, 1369
PciI	ACATGT	1 cut(s)	601
PciSI	GCTCTTC	3 cut(s)	185, 293, 809
PcsI	WCGNNNNNNNCGW	1 cut(s)	324
PfeI	GAWTC	4 cut(s)	195, 443, 697, 844
PinAI	ACCGGT	1 cut(s)	1773
PleI	GAGTC	2 cut(s)	1343, 1469
PpsI	GAGTC	2 cut(s)	1343, 1469
Ppu21I	YACGTR	1 cut(s)	713
PpuMI	RGGWCCY	1 cut(s)	1560
PscI	ACATGT	1 cut(s)	601
PshBI	ATTAAT	1 cut(s)	399
Psp124BI	GAGCTC	3 cut(s)	229, 318, 324
Psp5II	RGGWCCY	1 cut(s)	1560
Psp6I	CCWGG	2 cut(s)	458, 1185
PspGI	CCWGG	2 cut(s)	458, 1185
PspN4I	GGNNCC	3 cut(s)	997, 1561, 1735
PspPI	GGNCC	2 cut(s)	568, 1560
PspPPI	RGGWCCY	1 cut(s)	1560
PspXI	VCTCGAGB	1 cut(s)	317
PstI	CTGCAG	1 cut(s)	1256
PsuI	RGATCY	1 cut(s)	1240
PvuII	CAGCTG	2 cut(s)	1106, 1760
RseI	CAYNNNNRTG	2 cut(s)	629, 1655
SacI	GAGCTC	3 cut(s)	229, 318, 324
SapI	GCTCTTC	3 cut(s)	185, 293, 809
SaqAI	TTAA	6 cut(s)	399, 546, 1047, 1122, 1227, 1727
Sau96I	GGNCC	2 cut(s)	568, 1560
SchI	GAGTC	2 cut(s)	1343, 1470
ScrFI	CCNGG	3 cut(s)	460, 1187, 1557
SduI	GDGCHC	4 cut(s)	229, 295, 318, 324
SfaNI	GCATC	9 cut(s)	258, 348, 504, 748, 954, 1414, 1614, 1647, 1753
SfcI	CTRYAG	1 cut(s)	1252
Sfr274I	CTCGAG	1 cut(s)	317
SinI	GGWCC	2 cut(s)	568, 1560
SlaI	CTCGAG	1 cut(s)	317
SmiMI	CAYNNNNRTG	2 cut(s)	629, 1655
SmlI	CTYRAG	1 cut(s)	317
SmoI	CTYRAG	1 cut(s)	317
SnaBI	TACGTA	1 cut(s)	713
SpeI	ACTAGT	1 cut(s)	1342
Sse9I	AATT	9 cut(s)	127, 876, 1163, 1234, 1497, 1545, 1583, 1723, 1728
SsiI	CCGC	8 cut(s)	28, 46, 149, 210, 213, 286, 383, 665
SspMI	CTAG	4 cut(s)	422, 669, 1343, 1667
SstI	GAGCTC	3 cut(s)	229, 318, 324
StyD4I	CCNGG	3 cut(s)	458, 1185, 1555
StyI	CCWWGG	2 cut(s)	373, 820
TaaI	ACNGT	5 cut(s)	155, 240, 1010, 1307, 1363
TaiI	ACGT	4 cut(s)	330, 483, 645, 715
TaqI	TCGA	4 cut(s)	159, 318, 342, 921
TaqII	GACCGA	1 cut(s)	139
TasI	AATT	9 cut(s)	127, 876, 1163, 1234, 1497, 1545, 1583, 1723, 1728
TauI	GCSGC	4 cut(s)	213, 216, 289, 668
TfiI	GAWTC	4 cut(s)	195, 443, 697, 844
Tru1I	TTAA	6 cut(s)	399, 546, 1047, 1122, 1227, 1727
Tru9I	TTAA	6 cut(s)	399, 546, 1047, 1122, 1227, 1727
TscAI	CASTG	3 cut(s)	865, 1312, 1456
TseFI	GTSAC	4 cut(s)	476, 594, 638, 1421
TseI	GCWGC	7 cut(s)	257, 736, 914, 1415, 1511, 1588, 1757
Tsp45I	GTSAC	4 cut(s)	476, 594, 638, 1421
TspDTI	ATGAA	2 cut(s)	431, 1432
TspRI	CASTG	3 cut(s)	865, 1312, 1456
VpaK11BI	GGWCC	2 cut(s)	568, 1560
VspI	ATTAAT	1 cut(s)	399
XapI	RAATTY	3 cut(s)	127, 1163, 1234
XceI	RCATGY	2 cut(s)	605, 1540
XcmI	CCANNNNNNNNNTGG	1 cut(s)	631
XhoI	CTCGAG	1 cut(s)	317
XmiI	GTMKAC	2 cut(s)	988, 1131
XspI	CTAG	4 cut(s)	422, 669, 1343, 1667
ZraI	GACGTC	1 cut(s)	481
Zsp2I	ATGCAT	1 cut(s)	1783

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.