Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0003247

Physical Location & Seq

Genomic Coordinates Reverse (-)

65612123 .. 65616665

Gene Structure 4543 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG436800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1443 bp

ATGCTCCTCCATCTCTCTACTCTCCTCCGCGCCATCCATTCTACCCGCCCAATGGCGCGTTACATCCCACGCGCCACCCTCATATCCATCACCCCCATTCCCATCCGAAACACCACCCCCAGACGGAATTCAATCGTCCCTCCCCAACCGCACCGTTTCGACGCCTCCAAAGCCTCGCTCTTCTTCGGCCGGAGATTCCACGCCCTCTGCGGCGGCGACTGGAGAGCTCGTCCGAGACCGTCGTTACGCATCTGTGCTGCGCAGAGAGACTACCGGAAAGTGAGGCGACGAGCCCCGAAGAGAAAGGACAAGGAGCTCGAGCTCAACGTCAGCATTTGCATCGAAGAAGAGTTGCCTGACGATCCTGAAATCCTTGGGATAGCGGAGTTGCTCAGGATTAATGTTCCGATGGCAATGAAGCTAGCGTTTGATGGCTTGAAAGATTCGGAGTATAAAACCAGGGACGATGGCATCAGTGACGTCGGAGGGTTTCAGAGCGTGGAGCTTTCGGTGATGCTTTGCAATGACGAGTTTATCCGAAAGCTTAACAAAGAATGGAGAGATGAGGACCATGCTACTGATGTGCTTTCAATGTCACAACATGTCCCTGAGCTTAGGCTTCCCATTCTTATGTTGGGTGACGTTGTGATTTCTGTTGAGACTGCGGCTAGACAAGCAGAAGAAAGAGGACATACGATTCTTGACGAGATACGTATTCTCATGATACATGGATTGCTGCATCTACTAGGATTTGATCATGAGATTAGCGAAGAAGCCGAAGTGGAAATGGAGAAGGAGGAGGAGCTTCTCTTGAAGAGCCTTGGGTGGACGGGAAAAGGATTGATTCAGAGTGCGTCCAATGCTGAAATCAATGCAATTTCCCATGAGGAGAAACAGGATGGAAGAGAGAAGGCAGCCTTCGATACTATAAACCAAAGTTCAAATATATATTCTGCGATATGGATGCCTTATGTTTATTCTCTTGGTTTACAAGGCACCCTTCTCAACAGTAAAACTCAAATCAGTTCAACAACTGCAAAGGCTCTTAAAGAGGTCTCATCAAGGGGTGTGAAAATAGTGATAGCAACTGGAAAAACTCGCTCAGCTGTGATCAACATTTTTAAAATGGTAGACTTAGCAGGAAAAGATGGCATTGTTTCAGAATTTTCTCCTGGGGTTTTCTGCCAGGGATTGCTTGTTTATGGTAAGCAAGGTCGGGAAATCTTTAAAGGGAATTTAGATCCAAATGTCTGCAGAGAGGCGTGTCTTTACTCTTGGGAGAATAGGATACCTCTTATTGCTTACAGTGAGGATCATTGCTTCACTCTATTTGACCACCCACTAGTTGACTCACTACATACTGTATATCATGAGCCAAAGGGGGAGATCATGCCTTCAGTTGAGCATCTCTTGGCTGCTGGTGACATACAGGTATGGTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000287 GO:0003674 GO:0003824 GO:0005488 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019203 GO:0042578 GO:0043167 GO:0043169 GO:0044237 GO:0046872 GO:0050308

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Hydrolase_3 UPF0054

Protein Analysis

480

Amino Acids

54.05

Weight (kDa)

6.18

Isoelectric Point (pI)

45.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
YbeY	PF02130	165 - 273	2.7e-32	Endoribonuclease YbeY
Hydrolase_3	PF08282	330 - 445	5.3e-14	haloacid dehalogenase-like hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003247)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25870
fragaria_vesca	FvH4_2g35220 FvH4_2g35230
malus_domestica	MD08G1110200.v1.1 MD08G1110300.v1.1
prunus_persica	Prupe.1G444400_v2.0.a1 Prupe.1G444400_v2.0.a1 Prupe.1G444400_v2.0.a1 Prupe.1G444400_v2.0.a1 Prupe.1G444400_v2.0.a1 Prupe.1G444500_v2.0.a1 Prupe.1G444500_v2.0.a1 Prupe.1G444500_v2.0.a1
pyrus_communis	pycom08g09180 pycom15g08410
rosa_chinensis	RchiOBHm_Chr6g0306701 RchiOBHm_Chr6g0306711
rosa_laevigata	RLG00000010771 RLG00000010772
rosa_multiflora	Rmu_sc0005201.1_g000001 Rmu_sc0017725.1_g000001 Rmu_sc0017785.1_g000007 Rmu_sc0017785.1_g000008 Rmu_sc0017786.1_g000007
rosa_roxburghii	Rroxscaffold_7G00161520 Rroxscaffold_7G00161530
rosa_rugosa	Rorug06G0351700 Rorug06G0351700
rosa_samantha	Rh6AG464100 Rh6AG464200 Rh6BG436800 Rh6BG436900 Rh6CG478300 Rh6DG465000 Rh6DG465100
rosa_wichuraiana	Rw6G040430 Rw6G040440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	483
Acc16I	TGCGCA	1 cut(s)	261
AccB1I	GGYRCC	1 cut(s)	995
AccI	GTMKAC	1 cut(s)	1131
AccII	CGCG	3 cut(s)	30, 58, 72
AciI	CCGC	7 cut(s)	28, 46, 149, 210, 213, 383, 665
AclWI	GGATC	3 cut(s)	356, 1235, 1320
AcoI	YGGCCR	1 cut(s)	187
AcsI	RAATTY	3 cut(s)	127, 1163, 1234
AcuI	CTGAAG	1 cut(s)	1380
AcyI	GRCGYC	2 cut(s)	162, 480
AfiI	CCNNNNNNNGG	2 cut(s)	52, 123
AflIII	ACRYGT	1 cut(s)	601
AgsI	TTSAA	6 cut(s)	132, 439, 591, 814, 942, 1029
AhlI	ACTAGT	1 cut(s)	1342
AjnI	CCWGG	3 cut(s)	458, 1171, 1185
AluBI	AGCT	9 cut(s)	227, 316, 322, 421, 505, 544, 613, 805, 1106
AluI	AGCT	9 cut(s)	227, 316, 322, 421, 505, 544, 613, 805, 1106
Alw21I	GWGCWC	3 cut(s)	229, 318, 324
Alw26I	GTCTC	4 cut(s)	229, 261, 653, 1060
AlwI	GGATC	3 cut(s)	356, 1235, 1320
Ama87I	CYCGRG	1 cut(s)	317
AoxI	GGCC	1 cut(s)	187
ApeKI	GCWGC	4 cut(s)	257, 736, 914, 1415
ApoI	RAATTY	3 cut(s)	127, 1163, 1234
AseI	ATTAAT	1 cut(s)	399
AspLEI	GCGC	4 cut(s)	32, 58, 74, 262
AspS9I	GGNCC	2 cut(s)	568, 1437
AsuHPI	GGTGA	4 cut(s)	82, 523, 650, 1433
AsuNHI	GCTAGC	1 cut(s)	421
AvaI	CYCGRG	1 cut(s)	317
AvaII	GGWCC	2 cut(s)	568, 1437
BanI	GGYRCC	1 cut(s)	995
BanII	GRGCYC	4 cut(s)	229, 295, 318, 324
Bbv12I	GWGCWC	3 cut(s)	229, 318, 324
BbvI	GCAGC	4 cut(s)	244, 723, 926, 1402
BccI	CCATC	9 cut(s)	18, 41, 95, 110, 403, 425, 461, 893, 1142
BcgI	CGANNNNNNTGC	4 cut(s)	322, 356, 946, 980
BciT130I	CCWGG	3 cut(s)	460, 1173, 1187
BciVI	GTATCC	1 cut(s)	1281
BclI	TGATCA	2 cut(s)	754, 1110
BcoDI	GTCTC	4 cut(s)	229, 261, 653, 1060
BcuI	ACTAGT	1 cut(s)	1342
BfaI	CTAG	4 cut(s)	422, 669, 746, 1343
BfmI	CTRYAG	1 cut(s)	1252
BfuI	GTATCC	1 cut(s)	1281
BisI	GCNGC	7 cut(s)	211, 214, 258, 666, 737, 915, 1416
BlpI	GCTNAGC	1 cut(s)	1102
BlsI	GCNGC	7 cut(s)	212, 215, 259, 667, 738, 916, 1417
Bme1390I	CCNGG	3 cut(s)	460, 1173, 1187
Bme18I	GGWCC	2 cut(s)	568, 1437
BmeT110I	CYCGRG	1 cut(s)	317
BmgT120I	GGNCC	2 cut(s)	568, 1437
BmiI	GGNNCC	1 cut(s)	997
BmrFI	CCNGG	3 cut(s)	460, 1173, 1187
BmsI	GCATC	7 cut(s)	258, 348, 480, 504, 748, 954, 1414
BmtI	GCTAGC	1 cut(s)	425
BpmI	CTGGAG	1 cut(s)	241
Bpu10I	CCTNAGC	3 cut(s)	392, 609, 614
Bpu1102I	GCTNAGC	1 cut(s)	1102
BsaAI	YACGTR	1 cut(s)	713
BsaHI	GRCGYC	2 cut(s)	162, 480
BsaI	GGTCTC	2 cut(s)	229, 1060
BsaJI	CCNNGG	5 cut(s)	373, 459, 820, 1172, 1186
BsaWI	WCCGGW	1 cut(s)	273
BsaXI	ACNNNNNCTCC	2 cut(s)	214, 244
Bsc4I	CCNNNNNNNGG	2 cut(s)	52, 123
Bse1I	ACTGG	2 cut(s)	224, 1093
Bse3DI	GCAATG	3 cut(s)	420, 529, 1315
BseBI	CCWGG	3 cut(s)	460, 1173, 1187
BseDI	CCNNGG	5 cut(s)	373, 459, 820, 1172, 1186
BseGI	GGATG	5 cut(s)	33, 63, 102, 904, 969
BseLI	CCNNNNNNNGG	2 cut(s)	52, 123
BseMI	GCAATG	3 cut(s)	420, 529, 1315
BseMII	CTCAG	3 cut(s)	406, 600, 1116
BseNI	ACTGG	2 cut(s)	224, 1093
BseRI	GAGGAG	4 cut(s)	14, 812, 815, 902
BseX3I	CGGCCG	1 cut(s)	187
BseXI	GCAGC	4 cut(s)	244, 723, 926, 1402
Bsh1236I	CGCG	3 cut(s)	30, 58, 72
Bsh1285I	CGRYCG	1 cut(s)	190
BshFI	GGCC	1 cut(s)	189
BshNI	GGYRCC	1 cut(s)	995
BsiEI	CGRYCG	1 cut(s)	190
BsiHKAI	GWGCWC	3 cut(s)	229, 318, 324
BsiHKCI	CYCGRG	1 cut(s)	317
BsiSI	CCGG	2 cut(s)	190, 274
BslFI	GGGAC	3 cut(s)	122, 476, 590
BslI	CCNNNNNNNGG	2 cut(s)	52, 123
BsmAI	GTCTC	4 cut(s)	229, 261, 653, 1060
BsmFI	GGGAC	3 cut(s)	122, 476, 590
BsnI	GGCC	1 cut(s)	189
Bso31I	GGTCTC	2 cut(s)	229, 1060
BsoBI	CYCGRG	1 cut(s)	317
Bsp1286I	GDGCHC	4 cut(s)	229, 295, 318, 324
Bsp143I	GATC	6 cut(s)	361, 754, 1110, 1240, 1312, 1386
Bsp1720I	GCTNAGC	1 cut(s)	1102
BspACI	CCGC	7 cut(s)	28, 46, 149, 210, 213, 383, 665
BspANI	GGCC	1 cut(s)	189
BspCNI	CTCAG	3 cut(s)	405, 601, 1115
BspFNI	CGCG	3 cut(s)	30, 58, 72
BspHI	TCATGA	3 cut(s)	720, 757, 1369
BspLI	GGNNCC	1 cut(s)	997
BspMAI	CTGCAG	1 cut(s)	1256
BspOI	GCTAGC	1 cut(s)	425
BspPI	GGATC	3 cut(s)	356, 1235, 1320
BspQI	GCTCTTC	2 cut(s)	185, 809
BspT107I	GGYRCC	1 cut(s)	995
BspTNI	GGTCTC	2 cut(s)	229, 1060
BsrDI	GCAATG	3 cut(s)	420, 529, 1315
BsrI	ACTGG	2 cut(s)	224, 1093
BssECI	CCNNGG	5 cut(s)	373, 459, 820, 1172, 1186
BssMI	GATC	6 cut(s)	361, 754, 1110, 1240, 1312, 1386
BssNI	GRCGYC	2 cut(s)	162, 480
BssT1I	CCWWGG	2 cut(s)	373, 820
Bst2UI	CCWGG	3 cut(s)	460, 1173, 1187
Bst4CI	ACNGT	5 cut(s)	155, 240, 1010, 1307, 1363
Bst6I	CTCTTC	5 cut(s)	185, 293, 342, 809, 898
BstACI	GRCGYC	2 cut(s)	162, 480
BstBAI	YACGTR	1 cut(s)	713
BstC8I	GCNNGC	1 cut(s)	423
BstDEI	CTNAG	5 cut(s)	392, 609, 614, 1102, 1135
BstF5I	GGATG	5 cut(s)	33, 63, 102, 904, 969
BstFNI	CGCG	3 cut(s)	30, 58, 72
BstHHI	GCGC	4 cut(s)	32, 58, 74, 262
BstKTI	GATC	6 cut(s)	364, 757, 1113, 1243, 1315, 1389
BstMAI	GTCTC	4 cut(s)	229, 261, 653, 1060
BstMBI	GATC	6 cut(s)	361, 754, 1110, 1240, 1312, 1386
BstMCI	CGRYCG	1 cut(s)	190
BstMWI	GCNNNNNNNGC	3 cut(s)	170, 674, 860
BstNI	CCWGG	3 cut(s)	460, 1173, 1187
BstNSI	RCATGY	1 cut(s)	605
BstSCI	CCNGG	3 cut(s)	458, 1171, 1185
BstSFI	CTRYAG	1 cut(s)	1252
BstSNI	TACGTA	1 cut(s)	713
BstUI	CGCG	3 cut(s)	30, 58, 72
BstV1I	GCAGC	4 cut(s)	244, 723, 926, 1402
BstX2I	RGATCY	1 cut(s)	1240
BstYI	RGATCY	1 cut(s)	1240
BstZI	CGGCCG	1 cut(s)	187
BsuI	GTATCC	1 cut(s)	1281
BsuRI	GGCC	1 cut(s)	189
BtsCI	GGATG	5 cut(s)	33, 63, 102, 904, 969
BtsIMutI	CAGTG	2 cut(s)	481, 1312
Cac8I	GCNNGC	1 cut(s)	423
CciI	TCATGA	3 cut(s)	720, 757, 1369
CfoI	GCGC	4 cut(s)	32, 58, 74, 262
Cfr13I	GGNCC	2 cut(s)	568, 1437
CseI	GACGC	2 cut(s)	170, 843
CviAII	CATG	8 cut(s)	572, 602, 721, 728, 758, 884, 1370, 1390
DdeI	CTNAG	5 cut(s)	392, 609, 614, 1102, 1135
DpnI	GATC	6 cut(s)	363, 756, 1112, 1242, 1314, 1388
DpnII	GATC	6 cut(s)	361, 754, 1110, 1240, 1312, 1386
DraI	TTTAAA	2 cut(s)	1123, 1228
EaeI	YGGCCR	1 cut(s)	187
EagI	CGGCCG	1 cut(s)	187
Eam1104I	CTCTTC	5 cut(s)	185, 293, 342, 809, 898
EarI	CTCTTC	5 cut(s)	185, 293, 342, 809, 898
Ecl136II	GAGCTC	3 cut(s)	227, 316, 322
EclXI	CGGCCG	1 cut(s)	187
Eco105I	TACGTA	1 cut(s)	713
Eco130I	CCWWGG	2 cut(s)	373, 820
Eco24I	GRGCYC	4 cut(s)	229, 295, 318, 324
Eco31I	GGTCTC	2 cut(s)	229, 1060
Eco47I	GGWCC	2 cut(s)	568, 1437
Eco52I	CGGCCG	1 cut(s)	187
Eco53kI	GAGCTC	3 cut(s)	227, 316, 322
Eco57I	CTGAAG	1 cut(s)	1380
Eco88I	CYCGRG	1 cut(s)	317
EcoICRI	GAGCTC	3 cut(s)	227, 316, 322
EcoRI	GAATTC	1 cut(s)	127
EcoRII	CCWGG	3 cut(s)	458, 1171, 1185
EcoT14I	CCWWGG	2 cut(s)	373, 820
EcoT38I	GRGCYC	4 cut(s)	229, 295, 318, 324
ErhI	CCWWGG	2 cut(s)	373, 820
FaeI	CATG	8 cut(s)	575, 605, 724, 731, 761, 887, 1373, 1393
FalI	AAGNNNNNCTT	4 cut(s)	902, 934, 984, 1016
FaqI	GGGAC	3 cut(s)	122, 476, 590
FatI	CATG	8 cut(s)	571, 601, 720, 727, 757, 883, 1369, 1389
FauI	CCCGC	1 cut(s)	53
FbaI	TGATCA	2 cut(s)	754, 1110
FblI	GTMKAC	1 cut(s)	1131
Fnu4HI	GCNGC	7 cut(s)	211, 214, 258, 666, 737, 915, 1416
FokI	GGATG	5 cut(s)	20, 50, 89, 911, 976
FriOI	GRGCYC	4 cut(s)	229, 295, 318, 324
Fsp4HI	GCNGC	7 cut(s)	211, 214, 258, 666, 737, 915, 1416
FspBI	CTAG	4 cut(s)	422, 669, 746, 1343
FspI	TGCGCA	1 cut(s)	261
GlaI	GCGC	4 cut(s)	31, 57, 73, 261
GluI	GCNGC	7 cut(s)	211, 214, 258, 666, 737, 915, 1416
GsuI	CTGGAG	1 cut(s)	241
HaeIII	GGCC	1 cut(s)	189
HapII	CCGG	2 cut(s)	190, 274
HgaI	GACGC	2 cut(s)	170, 843
HhaI	GCGC	4 cut(s)	32, 58, 74, 262
Hin1I	GRCGYC	2 cut(s)	162, 480
Hin1II	CATG	8 cut(s)	575, 605, 724, 731, 761, 887, 1373, 1393
Hin6I	GCGC	4 cut(s)	30, 56, 72, 260
HinP1I	GCGC	4 cut(s)	30, 56, 72, 260
HincII	GTYRAC	1 cut(s)	1348
HindII	GTYRAC	1 cut(s)	1348
HindIII	AAGCTT	1 cut(s)	542
HinfI	GANTC	5 cut(s)	195, 443, 697, 844, 1349
HpaII	CCGG	2 cut(s)	190, 274
HphI	GGTGA	4 cut(s)	82, 523, 650, 1433
Hpy166II	GTNNAC	4 cut(s)	828, 989, 1132, 1348
Hpy188I	TCNGA	9 cut(s)	107, 234, 408, 448, 485, 495, 539, 849, 1162
Hpy188III	TCNNGA	9 cut(s)	365, 394, 701, 721, 758, 811, 1217, 1370, 1440
Hpy8I	GTNNAC	4 cut(s)	828, 989, 1132, 1348
Hpy99I	CGWCG	4 cut(s)	164, 244, 291, 485
HpyAV	CCTTC	5 cut(s)	787, 904, 928, 1010, 1404
HpyCH4III	ACNGT	5 cut(s)	155, 240, 1010, 1307, 1363
HpyCH4IV	ACGT	4 cut(s)	327, 480, 642, 712
HpyCH4V	TGCA	6 cut(s)	339, 522, 739, 875, 1037, 1254
HpyF10VI	GCNNNNNNNGC	3 cut(s)	170, 674, 860
HpyF3I	CTNAG	5 cut(s)	392, 609, 614, 1102, 1135
HpySE526I	ACGT	4 cut(s)	327, 480, 642, 712
Hsp92I	GRCGYC	2 cut(s)	162, 480
Hsp92II	CATG	8 cut(s)	575, 605, 724, 731, 761, 887, 1373, 1393
HspAI	GCGC	4 cut(s)	30, 56, 72, 260
Ksp22I	TGATCA	2 cut(s)	754, 1110
Kzo9I	GATC	6 cut(s)	361, 754, 1110, 1240, 1312, 1386
LguI	GCTCTTC	2 cut(s)	185, 809
LmnI	GCTCC	4 cut(s)	9, 313, 502, 802
Lsp1109I	GCAGC	4 cut(s)	244, 723, 926, 1402
LweI	GCATC	7 cut(s)	258, 348, 480, 504, 748, 954, 1414
MaeI	CTAG	4 cut(s)	422, 669, 746, 1343
MaeII	ACGT	4 cut(s)	327, 480, 642, 712
MaeIII	GTNAC	6 cut(s)	59, 243, 476, 594, 638, 1421
MalI	GATC	6 cut(s)	363, 756, 1112, 1242, 1314, 1388
MboI	GATC	6 cut(s)	361, 754, 1110, 1240, 1312, 1386
MboII	GAAGA	9 cut(s)	172, 175, 310, 356, 359, 692, 782, 826, 915
MflI	RGATCY	1 cut(s)	1240
MhlI	GDGCHC	4 cut(s)	229, 295, 318, 324
MluCI	AATT	4 cut(s)	127, 876, 1163, 1234
MlyI	GAGTC	1 cut(s)	1343
MmeI	TCCRAC	1 cut(s)	463
MseI	TTAA	5 cut(s)	399, 546, 1047, 1122, 1227
MslI	CAYNNNNRTG	1 cut(s)	629
MspA1I	CMGCKG	1 cut(s)	1106
MspI	CCGG	2 cut(s)	190, 274
MspR9I	CCNGG	3 cut(s)	460, 1173, 1187
MvaI	CCWGG	3 cut(s)	460, 1173, 1187
MvnI	CGCG	3 cut(s)	30, 58, 72
MwoI	GCNNNNNNNGC	3 cut(s)	170, 674, 860
NdeII	GATC	6 cut(s)	361, 754, 1110, 1240, 1312, 1386
NheI	GCTAGC	1 cut(s)	421
NlaIII	CATG	8 cut(s)	575, 605, 724, 731, 761, 887, 1373, 1393
NlaIV	GGNNCC	1 cut(s)	997
NmuCI	GTSAC	4 cut(s)	476, 594, 638, 1421
NsbI	TGCGCA	1 cut(s)	261
NspI	RCATGY	1 cut(s)	605
PaeR7I	CTCGAG	1 cut(s)	317
PagI	TCATGA	3 cut(s)	720, 757, 1369
PciI	ACATGT	1 cut(s)	601
PciSI	GCTCTTC	2 cut(s)	185, 809
PcsI	WCGNNNNNNNCGW	1 cut(s)	324
PfeI	GAWTC	4 cut(s)	195, 443, 697, 844
PkrI	GCNGC	7 cut(s)	212, 215, 259, 667, 738, 916, 1417
PleI	GAGTC	1 cut(s)	1343
PpsI	GAGTC	1 cut(s)	1343
Ppu21I	YACGTR	1 cut(s)	713
PscI	ACATGT	1 cut(s)	601
PshBI	ATTAAT	1 cut(s)	399
Psp124BI	GAGCTC	3 cut(s)	229, 318, 324
Psp6I	CCWGG	3 cut(s)	458, 1171, 1185
PspGI	CCWGG	3 cut(s)	458, 1171, 1185
PspN4I	GGNNCC	1 cut(s)	997
PspPI	GGNCC	2 cut(s)	568, 1437
PspXI	VCTCGAGB	1 cut(s)	317
PstI	CTGCAG	1 cut(s)	1256
PsuI	RGATCY	1 cut(s)	1240
PvuII	CAGCTG	1 cut(s)	1106
RseI	CAYNNNNRTG	1 cut(s)	629
SacI	GAGCTC	3 cut(s)	229, 318, 324
SapI	GCTCTTC	2 cut(s)	185, 809
SaqAI	TTAA	5 cut(s)	399, 546, 1047, 1122, 1227
SatI	GCNGC	7 cut(s)	211, 214, 258, 666, 737, 915, 1416
Sau3AI	GATC	6 cut(s)	361, 754, 1110, 1240, 1312, 1386
Sau96I	GGNCC	2 cut(s)	568, 1437
SchI	GAGTC	1 cut(s)	1343
ScrFI	CCNGG	3 cut(s)	460, 1173, 1187
SduI	GDGCHC	4 cut(s)	229, 295, 318, 324
SfaNI	GCATC	7 cut(s)	258, 348, 480, 504, 748, 954, 1414
SfcI	CTRYAG	1 cut(s)	1252
Sfr274I	CTCGAG	1 cut(s)	317
SinI	GGWCC	2 cut(s)	568, 1437
SlaI	CTCGAG	1 cut(s)	317
SmiMI	CAYNNNNRTG	1 cut(s)	629
SmlI	CTYRAG	1 cut(s)	317
SmoI	CTYRAG	1 cut(s)	317
SnaBI	TACGTA	1 cut(s)	713
SpeI	ACTAGT	1 cut(s)	1342
Sse9I	AATT	4 cut(s)	127, 876, 1163, 1234
SsiI	CCGC	7 cut(s)	28, 46, 149, 210, 213, 383, 665
SspMI	CTAG	4 cut(s)	422, 669, 746, 1343
SstI	GAGCTC	3 cut(s)	229, 318, 324
StyD4I	CCNGG	3 cut(s)	458, 1171, 1185
StyI	CCWWGG	2 cut(s)	373, 820
TaaI	ACNGT	5 cut(s)	155, 240, 1010, 1307, 1363
TaiI	ACGT	4 cut(s)	330, 483, 645, 715
TaqI	TCGA	4 cut(s)	159, 318, 342, 921
TasI	AATT	4 cut(s)	127, 876, 1163, 1234
TauI	GCSGC	3 cut(s)	213, 216, 668
TfiI	GAWTC	4 cut(s)	195, 443, 697, 844
Tru1I	TTAA	5 cut(s)	399, 546, 1047, 1122, 1227
Tru9I	TTAA	5 cut(s)	399, 546, 1047, 1122, 1227
TscAI	CASTG	2 cut(s)	481, 1312
TseFI	GTSAC	4 cut(s)	476, 594, 638, 1421
TseI	GCWGC	4 cut(s)	257, 736, 914, 1415
Tsp45I	GTSAC	4 cut(s)	476, 594, 638, 1421
TspDTI	ATGAA	1 cut(s)	431
TspGWI	ACGGA	1 cut(s)	139
TspRI	CASTG	2 cut(s)	481, 1312
VpaK11BI	GGWCC	2 cut(s)	568, 1437
VspI	ATTAAT	1 cut(s)	399
XapI	RAATTY	3 cut(s)	127, 1163, 1234
XceI	RCATGY	1 cut(s)	605
XcmI	CCANNNNNNNNNTGG	1 cut(s)	631
XhoI	CTCGAG	1 cut(s)	317
XmiI	GTMKAC	1 cut(s)	1131
XspI	CTAG	4 cut(s)	422, 669, 746, 1343
ZraI	GACGTC	1 cut(s)	481

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.