Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0003247

Physical Location & Seq

Genomic Coordinates Reverse (-)

4246939 .. 4250707

Gene Structure 3769 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00161530.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1611 bp

ATGGCGCGTTGCTTCCCACGCGCCACCCTGATATCCATCGCGTCATTTCCGAAACTGGTCGTCCCTGGCAGAACGAATCGCGTCGAGGCCTCGAAATCTGCGCTATTCGGCCGGAAATTCCACGCGCTGTGCCGTTACGATCGGAGAGACGCTGCGAGGCCATTGGTGAGGACGCGAGCCTTCGCTGAGCCGAAGGAGAAGGAGCTCCAGGTCAATGTGAGCGTTAGCATCGAAGAAGGTTTGCCTGAGGATCACGAAATATCGAGGATTGCCGAATTGCTTAGGCTAAATGTTCGAACTGCATTGAACCTAGTGTTTGGTGGATCGAAAGATTCCGGTGGTGGTTTTGGAAGCGCGGAGCTTTCGGTGATTCTGTGCAATGATGAGTTTATGAGAAAACGTAACAAGGAATGGAGAGACGAGGACCGTGCTACTGGTGTTGTTTCCAAGTCCAAGCATGTGCCTAGTCTTAAGATTCCAAATGTTGTGTTGGGTGACATTGTGATTTCTGTTGAGATGGCGAGGAGGCAAGCAGAGCAAAGAGGCCACACACTTCTTGATGAGATGCGCCTTCTCATGGTGCAGGGATTGTTACATTTATTGAGATCTGATCATGAGATCAGTAAAGAGGCTACAGGGGAAATGGAGAAGGAGGAGGAACGTCTTTTAGACAGTCTTGGGTGGAAGGGGAAAAGAATGGTTGCATCTGATGCTGAAACCCATCCAAAAGTCAACGAGGGGAAAAGAGACAGGAAGAAAGAAGGCAGCCTCCAACTCTATAAACCAAAGTTCAAATATGTGTTCTGTGACATGGATGGAACCCTCCTCAACAGCAAAAGTCAATTGAGTTTAACGACTGCCAGGGCTCTCAAAGAAGCCTCATTAAGGGGTGTGAAAATAGTGATTGCCACAGGTAAAGCTCGTCCAGCTGTGATGCGCGTCTTTAAGATGGTAGATTTAGCTGGAAAAGATGGCATTGTTTCAGAATTTTCTCCTGGGGTTTACTTGCAGGGATTGCTGGTTTATGGTATTCAAGGTCAGGAAATTTGTAAAAGGAATTTAGATCCAAATGTCTGCAGAGAGGCATGTCTTTACTCATTGGAGAATAAGGTTCCTCTCATTGCATTCAGCAAGGACCGGTGCTCGAGTCTGTTTGATCACCCATATGTTGATGCTATGCATACTGTATATCATGAGCCAAAGGCAGAGATCATGCCTTCAGTTGAGCAGTTCTTGGCTGCTGCTGACATACAGAAACTGGTCTTCATGGACACTGCTGAGGGAGTATCTACTGCTCTGAGGCCGTATTGGTCAGAAGCAACTGGAGATCGTGCCACAGTTGTTCAAACTGTGCCAGACATGCTTGAACTTGTTCCCCCAGGAACCTCAAAAGGTAGTGGAGTAAAGATGTTGCTTGATCATTTGGGAATCACTCCAAAGGAGATCATGGCTATTGGCGATGGGGAGAATGATGTTGAGATGCTTGAGCTGGCTGGTTTGGGCATTTGTCTCAGTAATGGATCAGAGAAAACAAAAGCTGTGGCGAATGTAATCGGTGCCAGCAACGACGAAGATGGTGCTGCTGATGCAATCTACCGCTATGCAATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004540 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009657 GO:0009658 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016072 GO:0016787 GO:0016788 GO:0022613 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0140098 GO:1901259 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Hydrolase_3 UPF0054

Protein Analysis

536

Amino Acids

59.19

Weight (kDa)

7.58

Isoelectric Point (pI)

33.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
YbeY	PF02130	118 - 225	4.9e-23	Endoribonuclease YbeY
Hydrolase_3	PF08282	267 - 531	9.5e-49	haloacid dehalogenase-like hydrolase
Hydrolase	PF00702	439 - 499	1.3e-06	haloacid dehalogenase-like hydrolase
S6PP	PF05116	442 - 510	2.1e-08	Sucrose-6F-phosphate phosphohydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003247)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25870
fragaria_vesca	FvH4_2g35220 FvH4_2g35230
malus_domestica	MD08G1110200.v1.1 MD08G1110300.v1.1
prunus_persica	Prupe.1G444400_v2.0.a1 Prupe.1G444400_v2.0.a1 Prupe.1G444400_v2.0.a1 Prupe.1G444400_v2.0.a1 Prupe.1G444400_v2.0.a1 Prupe.1G444500_v2.0.a1 Prupe.1G444500_v2.0.a1 Prupe.1G444500_v2.0.a1
pyrus_communis	pycom08g09180 pycom15g08410
rosa_chinensis	RchiOBHm_Chr6g0306701 RchiOBHm_Chr6g0306711
rosa_laevigata	RLG00000010771 RLG00000010772
rosa_multiflora	Rmu_sc0005201.1_g000001 Rmu_sc0017725.1_g000001 Rmu_sc0017785.1_g000007 Rmu_sc0017785.1_g000008 Rmu_sc0017786.1_g000007
rosa_roxburghii	Rroxscaffold_7G00161520 Rroxscaffold_7G00161530
rosa_rugosa	Rorug06G0351700 Rorug06G0351700
rosa_samantha	Rh6AG464100 Rh6AG464200 Rh6BG436800 Rh6BG436900 Rh6CG478300 Rh6DG465000 Rh6DG465100
rosa_wichuraiana	Rw6G040430 Rw6G040440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1556
AccII	CGCG	8 cut(s)	7, 21, 41, 81, 125, 175, 356, 939
AciI	CCGC	2 cut(s)	356, 1597
AclWI	GGATC	4 cut(s)	258, 331, 1058, 1528
AcoI	YGGCCR	1 cut(s)	109
AcsI	RAATTY	4 cut(s)	116, 986, 1044, 1057
AcuI	CTGAAG	1 cut(s)	1203
AfiI	CCNNNNNNNGG	2 cut(s)	577, 885
AflII	CTTAAG	1 cut(s)	470
AgeI	ACCGGT	1 cut(s)	1137
AgsI	TTSAA	5 cut(s)	307, 793, 1034, 1346, 1367
AjnI	CCWGG	5 cut(s)	64, 207, 860, 994, 1378
AluBI	AGCT	7 cut(s)	205, 361, 920, 929, 962, 1489, 1538
AluI	AGCT	7 cut(s)	205, 361, 920, 929, 962, 1489, 1538
Alw21I	GWGCWC	2 cut(s)	207, 1145
Alw26I	GTCTC	4 cut(s)	141, 411, 741, 1514
AlwI	GGATC	4 cut(s)	258, 331, 1058, 1528
AlwNI	CAGNNNCTG	1 cut(s)	1258
Ama87I	CYCGRG	1 cut(s)	1144
AoxI	GGCC	5 cut(s)	87, 109, 158, 544, 1301
ApeKI	GCWGC	5 cut(s)	152, 765, 1238, 1241, 1580
ApoI	RAATTY	4 cut(s)	116, 986, 1044, 1057
AsiGI	ACCGGT	1 cut(s)	1137
Asp700I	GAANNNNTTC	1 cut(s)	1371
AspLEI	GCGC	7 cut(s)	7, 23, 103, 127, 356, 570, 939
AspS9I	GGNCC	2 cut(s)	424, 1135
AsuHPI	GGTGA	4 cut(s)	178, 379, 506, 1151
AsuII	TTCGAA	1 cut(s)	295
AvaI	CYCGRG	1 cut(s)	1144
AvaII	GGWCC	2 cut(s)	424, 1135
AxyI	CCTNAGG	1 cut(s)	246
BanI	GGYRCC	1 cut(s)	1556
BanII	GRGCYC	2 cut(s)	207, 868
BbsI	GAAGAC	1 cut(s)	1255
Bbv12I	GWGCWC	2 cut(s)	207, 1145
BbvCI	CCTCAGC	1 cut(s)	1278
BbvI	GCAGC	5 cut(s)	139, 777, 1225, 1228, 1567
BccI	CCATC	8 cut(s)	44, 511, 729, 809, 943, 965, 1454, 1568
BceAI	ACGGC	2 cut(s)	117, 1288
BcgI	CGANNNNNNTGC	4 cut(s)	410, 444, 1559, 1593
BciT130I	CCWGG	5 cut(s)	66, 209, 862, 996, 1380
BclI	TGATCA	3 cut(s)	610, 1156, 1417
BcoDI	GTCTC	4 cut(s)	141, 411, 741, 1514
BfaI	CTAG	2 cut(s)	311, 465
BfmI	CTRYAG	2 cut(s)	633, 1075
BfrI	CTTAAG	1 cut(s)	470
BglII	AGATCT	1 cut(s)	605
BisI	GCNGC	5 cut(s)	153, 766, 1239, 1242, 1581
BlpI	GCTNAGC	1 cut(s)	186
BlsI	GCNGC	5 cut(s)	154, 767, 1240, 1243, 1582
Bme1390I	CCNGG	5 cut(s)	66, 209, 862, 996, 1380
Bme18I	GGWCC	2 cut(s)	424, 1135
BmeT110I	CYCGRG	1 cut(s)	1144
BmgT120I	GGNCC	2 cut(s)	424, 1135
BmiI	GGNNCC	4 cut(s)	820, 1113, 1384, 1558
BmrFI	CCNGG	5 cut(s)	66, 209, 862, 996, 1380
BmsI	GCATC	8 cut(s)	237, 555, 700, 713, 924, 1162, 1470, 1576
BpiI	GAAGAC	1 cut(s)	1255
BpmI	CTGGAG	2 cut(s)	191, 1344
Bpu10I	CCTNAGC	2 cut(s)	281, 1278
Bpu1102I	GCTNAGC	1 cut(s)	186
Bpu14I	TTCGAA	1 cut(s)	295
BpuEI	CTTGAG	1 cut(s)	1505
BsaBI	GATNNNNATC	1 cut(s)	35
BsaJI	CCNNGG	4 cut(s)	64, 861, 995, 1378
BsaWI	WCCGGW	2 cut(s)	335, 1137
Bsc4I	CCNNNNNNNGG	2 cut(s)	577, 885
Bse118I	RCCGGY	1 cut(s)	1137
Bse1I	ACTGG	4 cut(s)	60, 439, 1263, 1327
Bse21I	CCTNAGG	1 cut(s)	246
Bse3DI	GCAATG	3 cut(s)	385, 1119, 1611
Bse8I	GATNNNNATC	1 cut(s)	35
BseBI	CCWGG	5 cut(s)	66, 209, 862, 996, 1380
BseDI	CCNNGG	4 cut(s)	64, 861, 995, 1378
BseGI	GGATG	2 cut(s)	721, 820
BseJI	GATNNNNATC	1 cut(s)	35
BseLI	CCNNNNNNNGG	2 cut(s)	577, 885
BseMI	GCAATG	3 cut(s)	385, 1119, 1611
BseMII	CTCAG	5 cut(s)	177, 237, 1269, 1289, 1525
BseNI	ACTGG	4 cut(s)	60, 439, 1263, 1327
BseRI	GAGGAG	3 cut(s)	538, 668, 815
BseX3I	CGGCCG	1 cut(s)	109
BseXI	GCAGC	5 cut(s)	139, 777, 1225, 1228, 1567
BsgI	GTGCAG	1 cut(s)	602
Bsh1236I	CGCG	8 cut(s)	7, 21, 41, 81, 125, 175, 356, 939
Bsh1285I	CGRYCG	2 cut(s)	112, 142
BshFI	GGCC	5 cut(s)	89, 111, 160, 546, 1303
BshNI	GGYRCC	1 cut(s)	1556
BshTI	ACCGGT	1 cut(s)	1137
BsiEI	CGRYCG	2 cut(s)	112, 142
BsiHKAI	GWGCWC	2 cut(s)	207, 1145
BsiHKCI	CYCGRG	1 cut(s)	1144
BsiSI	CCGG	3 cut(s)	112, 336, 1138
BslFI	GGGAC	1 cut(s)	47
BslI	CCNNNNNNNGG	2 cut(s)	577, 885
BsmAI	GTCTC	4 cut(s)	141, 411, 741, 1514
BsmBI	CGTCTC	2 cut(s)	141, 411
BsmFI	GGGAC	1 cut(s)	47
BsmI	GAATGC	1 cut(s)	1124
BsnI	GGCC	5 cut(s)	89, 111, 160, 546, 1303
BsoBI	CYCGRG	1 cut(s)	1144
Bsp119I	TTCGAA	1 cut(s)	295
Bsp1286I	GDGCHC	3 cut(s)	207, 868, 1145
Bsp1720I	GCTNAGC	1 cut(s)	186
BspACI	CCGC	2 cut(s)	356, 1597
BspANI	GGCC	5 cut(s)	89, 111, 160, 546, 1303
BspCNI	CTCAG	5 cut(s)	178, 238, 1270, 1290, 1524
BspFNI	CGCG	8 cut(s)	7, 21, 41, 81, 125, 175, 356, 939
BspHI	TCATGA	2 cut(s)	613, 1192
BspLI	GGNNCC	4 cut(s)	820, 1113, 1384, 1558
BspMAI	CTGCAG	1 cut(s)	1079
BspPI	GGATC	4 cut(s)	258, 331, 1058, 1528
BspT104I	TTCGAA	1 cut(s)	295
BspT107I	GGYRCC	1 cut(s)	1556
BspTI	CTTAAG	1 cut(s)	470
BsrDI	GCAATG	3 cut(s)	385, 1119, 1611
BsrFI	RCCGGY	1 cut(s)	1137
BsrI	ACTGG	4 cut(s)	60, 439, 1263, 1327
BssAI	RCCGGY	1 cut(s)	1137
BssECI	CCNNGG	4 cut(s)	64, 861, 995, 1378
Bst2UI	CCWGG	5 cut(s)	66, 209, 862, 996, 1380
Bst4CI	ACNGT	5 cut(s)	428, 674, 1186, 1339, 1351
BstAFI	CTTAAG	1 cut(s)	470
BstAPI	GCANNNNNTGC	2 cut(s)	710, 1015
BstBI	TTCGAA	1 cut(s)	295
BstC8I	GCNNGC	4 cut(s)	177, 531, 1491, 1561
BstDEI	CTNAG	6 cut(s)	186, 246, 281, 1278, 1298, 1511
BstENI	CCTNNNNNAGG	1 cut(s)	883
BstF5I	GGATG	2 cut(s)	721, 820
BstFNI	CGCG	8 cut(s)	7, 21, 41, 81, 125, 175, 356, 939
BstHHI	GCGC	7 cut(s)	7, 23, 103, 127, 356, 570, 939
BstMAI	GTCTC	4 cut(s)	141, 411, 741, 1514
BstMCI	CGRYCG	2 cut(s)	112, 142
BstMWI	GCNNNNNNNGC	7 cut(s)	18, 535, 710, 926, 1015, 1360, 1586
BstNI	CCWGG	5 cut(s)	66, 209, 862, 996, 1380
BstNSI	RCATGY	3 cut(s)	461, 1089, 1363
BstSCI	CCNGG	5 cut(s)	64, 207, 860, 994, 1378
BstSFI	CTRYAG	2 cut(s)	633, 1075
BstUI	CGCG	8 cut(s)	7, 21, 41, 81, 125, 175, 356, 939
BstV1I	GCAGC	5 cut(s)	139, 777, 1225, 1228, 1567
BstV2I	GAAGAC	1 cut(s)	1255
BstX2I	RGATCY	2 cut(s)	605, 1063
BstYI	RGATCY	2 cut(s)	605, 1063
BstZI	CGGCCG	1 cut(s)	109
Bsu36I	CCTNAGG	1 cut(s)	246
BsuRI	GGCC	5 cut(s)	89, 111, 160, 546, 1303
BtgZI	GCGATG	2 cut(s)	22, 1473
BtsCI	GGATG	2 cut(s)	721, 820
BtsI	GCAGTG	1 cut(s)	1272
BtsIMutI	CAGTG	1 cut(s)	1272
Cac8I	GCNNGC	4 cut(s)	177, 531, 1491, 1561
CaiI	CAGNNNCTG	1 cut(s)	1258
CciI	TCATGA	2 cut(s)	613, 1192
CfoI	GCGC	7 cut(s)	7, 23, 103, 127, 356, 570, 939
Cfr10I	RCCGGY	1 cut(s)	1137
Cfr13I	GGNCC	2 cut(s)	424, 1135
CseI	GACGC	5 cut(s)	30, 70, 158, 181, 928
CspAI	ACCGGT	1 cut(s)	1137
CspCI	CAANNNNNGTGG	2 cut(s)	1521, 1556
DdeI	CTNAG	6 cut(s)	186, 246, 281, 1278, 1298, 1511
EaeI	YGGCCR	1 cut(s)	109
EagI	CGGCCG	1 cut(s)	109
Ecl136II	GAGCTC	1 cut(s)	205
EclXI	CGGCCG	1 cut(s)	109
Eco147I	AGGCCT	1 cut(s)	89
Eco24I	GRGCYC	2 cut(s)	207, 868
Eco32I	GATATC	1 cut(s)	33
Eco47I	GGWCC	2 cut(s)	424, 1135
Eco52I	CGGCCG	1 cut(s)	109
Eco53kI	GAGCTC	1 cut(s)	205
Eco57I	CTGAAG	1 cut(s)	1203
Eco81I	CCTNAGG	1 cut(s)	246
Eco88I	CYCGRG	1 cut(s)	1144
EcoICRI	GAGCTC	1 cut(s)	205
EcoNI	CCTNNNNNAGG	1 cut(s)	883
EcoRII	CCWGG	5 cut(s)	64, 207, 860, 994, 1378
EcoRV	GATATC	1 cut(s)	33
EcoT22I	ATGCAT	1 cut(s)	1182
EcoT38I	GRGCYC	2 cut(s)	207, 868
Esp3I	CGTCTC	2 cut(s)	141, 411
FaqI	GGGAC	1 cut(s)	47
FauNDI	CATATG	1 cut(s)	1165
FbaI	TGATCA	3 cut(s)	610, 1156, 1417
Fnu4HI	GCNGC	5 cut(s)	153, 766, 1239, 1242, 1581
FokI	GGATG	2 cut(s)	708, 827
FriOI	GRGCYC	2 cut(s)	207, 868
Fsp4HI	GCNGC	5 cut(s)	153, 766, 1239, 1242, 1581
FspBI	CTAG	2 cut(s)	311, 465
GlaI	GCGC	7 cut(s)	6, 22, 102, 126, 355, 569, 938
GluI	GCNGC	5 cut(s)	153, 766, 1239, 1242, 1581
GsuI	CTGGAG	2 cut(s)	191, 1344
HaeIII	GGCC	5 cut(s)	89, 111, 160, 546, 1303
HapII	CCGG	3 cut(s)	112, 336, 1138
HgaI	GACGC	5 cut(s)	30, 70, 158, 181, 928
HhaI	GCGC	7 cut(s)	7, 23, 103, 127, 356, 570, 939
Hin6I	GCGC	7 cut(s)	5, 21, 101, 125, 354, 568, 937
HinP1I	GCGC	7 cut(s)	5, 21, 101, 125, 354, 568, 937
HincII	GTYRAC	1 cut(s)	733
HindII	GTYRAC	1 cut(s)	733
HinfI	GANTC	6 cut(s)	76, 332, 370, 475, 1147, 1428
HpaII	CCGG	3 cut(s)	112, 336, 1138
HphI	GGTGA	4 cut(s)	178, 379, 506, 1151
Hpy166II	GTNNAC	2 cut(s)	733, 1003
Hpy188I	TCNGA	8 cut(s)	51, 144, 610, 709, 985, 1299, 1315, 1525
Hpy188III	TCNNGA	5 cut(s)	254, 557, 614, 1040, 1193
Hpy8I	GTNNAC	2 cut(s)	733, 1003
Hpy99I	CGWCG	2 cut(s)	86, 1571
HpyAV	CCTTC	9 cut(s)	187, 190, 193, 230, 581, 643, 679, 755, 1227
HpyCH4III	ACNGT	5 cut(s)	428, 674, 1186, 1339, 1351
HpyCH4IV	ACGT	2 cut(s)	400, 661
HpyF10VI	GCNNNNNNNGC	7 cut(s)	18, 535, 710, 926, 1015, 1360, 1586
HpyF3I	CTNAG	6 cut(s)	186, 246, 281, 1278, 1298, 1511
HpySE526I	ACGT	2 cut(s)	400, 661
HspAI	GCGC	7 cut(s)	5, 21, 101, 125, 354, 568, 937
Ksp22I	TGATCA	3 cut(s)	610, 1156, 1417
LmnI	GCTCC	3 cut(s)	202, 210, 358
Lsp1109I	GCAGC	5 cut(s)	139, 777, 1225, 1228, 1567
LweI	GCATC	8 cut(s)	237, 555, 700, 713, 924, 1162, 1470, 1576
MaeI	CTAG	2 cut(s)	311, 465
MaeII	ACGT	2 cut(s)	400, 661
MaeIII	GTNAC	5 cut(s)	134, 401, 494, 591, 806
MboII	GAAGA	4 cut(s)	245, 766, 1255, 1583
MfeI	CAATTG	1 cut(s)	842
MflI	RGATCY	2 cut(s)	605, 1063
MhlI	GDGCHC	3 cut(s)	207, 868, 1145
MluCI	AATT	6 cut(s)	116, 275, 842, 986, 1044, 1057
MlyI	GAGTC	1 cut(s)	1156
MmeI	TCCRAC	1 cut(s)	796
Mph1103I	ATGCAT	1 cut(s)	1182
MroXI	GAANNNNTTC	1 cut(s)	1371
MseI	TTAA	4 cut(s)	471, 851, 884, 945
MslI	CAYNNNNRTG	1 cut(s)	1164
MspA1I	CMGCKG	1 cut(s)	929
MspCI	CTTAAG	1 cut(s)	470
MspI	CCGG	3 cut(s)	112, 336, 1138
MspR9I	CCNGG	5 cut(s)	66, 209, 862, 996, 1380
MunI	CAATTG	1 cut(s)	842
Mva1269I	GAATGC	1 cut(s)	1124
MvaI	CCWGG	5 cut(s)	66, 209, 862, 996, 1380
MvnI	CGCG	8 cut(s)	7, 21, 41, 81, 125, 175, 356, 939
MwoI	GCNNNNNNNGC	7 cut(s)	18, 535, 710, 926, 1015, 1360, 1586
NdeI	CATATG	1 cut(s)	1165
NlaIV	GGNNCC	4 cut(s)	820, 1113, 1384, 1558
NmuCI	GTSAC	2 cut(s)	494, 806
NsiI	ATGCAT	1 cut(s)	1182
NspI	RCATGY	3 cut(s)	461, 1089, 1363
NspV	TTCGAA	1 cut(s)	295
PaeR7I	CTCGAG	1 cut(s)	1144
PagI	TCATGA	2 cut(s)	613, 1192
PceI	AGGCCT	1 cut(s)	89
PctI	GAATGC	1 cut(s)	1124
PdmI	GAANNNNTTC	1 cut(s)	1371
PfeI	GAWTC	5 cut(s)	76, 332, 370, 475, 1428
PinAI	ACCGGT	1 cut(s)	1137
PkrI	GCNGC	5 cut(s)	154, 767, 1240, 1243, 1582
Ple19I	CGATCG	1 cut(s)	142
PleI	GAGTC	1 cut(s)	1155
PpsI	GAGTC	1 cut(s)	1155
Psp124BI	GAGCTC	1 cut(s)	207
Psp6I	CCWGG	5 cut(s)	64, 207, 860, 994, 1378
PspGI	CCWGG	5 cut(s)	64, 207, 860, 994, 1378
PspN4I	GGNNCC	4 cut(s)	820, 1113, 1384, 1558
PspPI	GGNCC	2 cut(s)	424, 1135
PspXI	VCTCGAGB	1 cut(s)	1144
PstI	CTGCAG	1 cut(s)	1079
PstNI	CAGNNNCTG	1 cut(s)	1258
PsuI	RGATCY	2 cut(s)	605, 1063
PvuI	CGATCG	1 cut(s)	142
PvuII	CAGCTG	1 cut(s)	929
RseI	CAYNNNNRTG	1 cut(s)	1164
SacI	GAGCTC	1 cut(s)	207
SaqAI	TTAA	4 cut(s)	471, 851, 884, 945
SatI	GCNGC	5 cut(s)	153, 766, 1239, 1242, 1581
Sau96I	GGNCC	2 cut(s)	424, 1135
SchI	GAGTC	1 cut(s)	1156
ScrFI	CCNGG	5 cut(s)	66, 209, 862, 996, 1380
SduI	GDGCHC	3 cut(s)	207, 868, 1145
SfaNI	GCATC	8 cut(s)	237, 555, 700, 713, 924, 1162, 1470, 1576
SfcI	CTRYAG	2 cut(s)	633, 1075
Sfr274I	CTCGAG	1 cut(s)	1144
SfuI	TTCGAA	1 cut(s)	295
SinI	GGWCC	2 cut(s)	424, 1135
SlaI	CTCGAG	1 cut(s)	1144
SmiMI	CAYNNNNRTG	1 cut(s)	1164
SmlI	CTYRAG	3 cut(s)	470, 1144, 1484
SmoI	CTYRAG	3 cut(s)	470, 1144, 1484
Sse9I	AATT	6 cut(s)	116, 275, 842, 986, 1044, 1057
SseBI	AGGCCT	1 cut(s)	89
SsiI	CCGC	2 cut(s)	356, 1597
SspMI	CTAG	2 cut(s)	311, 465
SstI	GAGCTC	1 cut(s)	207
StuI	AGGCCT	1 cut(s)	89
StyD4I	CCNGG	5 cut(s)	64, 207, 860, 994, 1378
TaaI	ACNGT	5 cut(s)	428, 674, 1186, 1339, 1351
TaiI	ACGT	2 cut(s)	403, 664
TaqI	TCGA	7 cut(s)	84, 92, 231, 263, 295, 326, 1145
TasI	AATT	6 cut(s)	116, 275, 842, 986, 1044, 1057
TfiI	GAWTC	5 cut(s)	76, 332, 370, 475, 1428
Tru1I	TTAA	4 cut(s)	471, 851, 884, 945
Tru9I	TTAA	4 cut(s)	471, 851, 884, 945
TscAI	CASTG	1 cut(s)	1279
TseFI	GTSAC	2 cut(s)	494, 806
TseI	GCWGC	5 cut(s)	152, 765, 1238, 1241, 1580
Tsp45I	GTSAC	2 cut(s)	494, 806
TspDTI	ATGAA	1 cut(s)	1255
TspRI	CASTG	1 cut(s)	1279
Vha464I	CTTAAG	1 cut(s)	470
VpaK11BI	GGWCC	2 cut(s)	424, 1135
XagI	CCTNNNNNAGG	1 cut(s)	883
XapI	RAATTY	4 cut(s)	116, 986, 1044, 1057
XceI	RCATGY	3 cut(s)	461, 1089, 1363
XhoI	CTCGAG	1 cut(s)	1144
XmnI	GAANNNNTTC	1 cut(s)	1371
XspI	CTAG	2 cut(s)	311, 465
Zsp2I	ATGCAT	1 cut(s)	1182

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.