Basic Information

Type: Sequence Only

Biological Identity

Species

rosa_samantha

Chromosome

Unknown

Orthogroup ID

OG0003247

Physical Location & Seq

Genomic Coordinates Reverse (-)

0 .. 0

Gene Structure 1 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG478300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1608 bp

ATGGCGCGTTGCGTCCCACGCGCCACCCTGATATCCACCGCGTCATTTCCGAAACTGGTCGTCCCTGGCAGAACGAATCGCGTCGGGGCCTCGAAATCTGCGCTATTCGGCCGGAAATTCCACGCGCTGTGCCGTTACGATCGGAGAGACGCTGCGAGGCCATTGGTGAGGACGCGAGTCTTCGCTGAGCAGAAGGAGAAGGAACTCCAGGTCAATGTGAGCGTTAGCATCGAACAAGGTTTGCCTGAGGATCACGAAATATCGAGGATTGCCGAATTGCTTAGGCTAAATGTTCGAACTGCATTGAACCTAGCGTTTGGTGGATTGAAAGATTCCGGTGGTGGTTTTGAAAGCGCGGAGCTTTCGGTGATTCTGTGCAATGATGAGTTTATGAGAAAACGTAACAAGGAATGGAGAGACGAGGACCGTGCTACTGGTGTTGTTTCCAAGTCCAAGCATGTGTCTGGTCTTAAGATTCCAAATGTTGTGTTGGGTGACATTGTGATTTCTGTTGAGATGGCGGCGAGGCAAGCAGAGCAAAGAGGCCACACACTTCTTGATGAGATGCGCCTTCTCATGGTGCAGGGATTGTTACATTTATTGAGATCTGATCATGAGATCAGTAAAGAGGCTACAGGGGAAATGGAGAAGGAGGAGGAACGTCTTTTAGACAGTCTTGGGTGGAAGGGGAAAAGAATGGTTGCATCTGATGCTGAAACCCATCCAAAAGCCAACGAGGGGAAAAGATGGAAGAAAGAAGGCAGCCTCCGACTCTATAAACCAAAGTTCAAATATGTGTTCTGTGACATGGATGGAACCCTCCTCAACAGCAAAAGTCAATTGAGTTCAACCACTGCCAGGGCTCTCAAAGAAGCCTCATCAAGGGGTGTGAAAATAGTGATTGCCACGGGTAAAGCTCGTCCAGCTGTGATGCGTGTCTTTAAGATGGTAGATTTAGCTGGAAAAGATGGCATTGTTTCAGAATTTTCTCCTGGGGTTTACTTGCAGGGATTGCTGGTTTATGGAATTCAAGGTCAGGAAATTTGTAAAAGGAATTTAGATCCAAATGTCTGCAGAGAGGCGTGTCTTTACTCTTGGGAGAATAGGATACCTCTTATTGCTTACAGTGAGGATCGTTGCTTCACTCTATTTGACCACCCACTAGTTGACTCACTACATACTGTATATCATGAGCCAAAGGGGGAGATCATGCCTTCAGTTGAGCATCTCTTGGCTGCTGGTGACATACAGAAAGTAATCTTCATGGACACTGCCGAAGGAGTCGCAACTACTTTGAGGCCATACTGGTCAGGAGCAATTAGAGATCGTGCAGCAGTTGTTCAAGCTCAGCCGGACATGCTTGAAATTGTCCCTCCGGGGACCTCAAAAGGGAGTGGAGTAAAATTGCTGCTTGATCATTTGGGCATCACTCCAAAGGAGATCATGGCTATTGGCGATGGAGAAAATGACATTGAGATGCTTGAACTAGCTTCTTTAGGTGTTGCTCTTAGCAATGGTTCAGAGAAAACAAAAGCTGTGGCTAATTTAATTGGTGCCAGTAACGACGAAGATGGTGCAGCTGATGCGATCTACCGGTATGCATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004540 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009657 GO:0009658 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016072 GO:0016787 GO:0016788 GO:0022613 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0140098 GO:1901259 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Hydrolase_3 UPF0054

Protein Analysis

535

Amino Acids

59.06

Weight (kDa)

8.01

Isoelectric Point (pI)

31.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
YbeY	PF02130	117 - 225	3.4e-23	Endoribonuclease YbeY
Hydrolase_3	PF08282	266 - 530	6.2e-51	haloacid dehalogenase-like hydrolase
S6PP	PF05116	446 - 509	3.9e-09	Sucrose-6F-phosphate phosphohydrolase
Hydrolase	PF00702	455 - 497	2.6e-06	haloacid dehalogenase-like hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003247)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25870
fragaria_vesca	FvH4_2g35220 FvH4_2g35230
malus_domestica	MD08G1110200.v1.1 MD08G1110300.v1.1
prunus_persica	Prupe.1G444400_v2.0.a1 Prupe.1G444400_v2.0.a1 Prupe.1G444400_v2.0.a1 Prupe.1G444400_v2.0.a1 Prupe.1G444400_v2.0.a1 Prupe.1G444500_v2.0.a1 Prupe.1G444500_v2.0.a1 Prupe.1G444500_v2.0.a1
pyrus_communis	pycom08g09180 pycom15g08410
rosa_chinensis	RchiOBHm_Chr6g0306701 RchiOBHm_Chr6g0306711
rosa_laevigata	RLG00000010771 RLG00000010772
rosa_multiflora	Rmu_sc0005201.1_g000001 Rmu_sc0017725.1_g000001 Rmu_sc0017785.1_g000007 Rmu_sc0017785.1_g000008 Rmu_sc0017786.1_g000007
rosa_roxburghii	Rroxscaffold_7G00161520 Rroxscaffold_7G00161530
rosa_rugosa	Rorug06G0351700 Rorug06G0351700
rosa_samantha	Rh6AG464100 Rh6AG464200 Rh6BG436800 Rh6BG436900 Rh6CG478300 Rh6DG465000 Rh6DG465100
rosa_wichuraiana	Rw6G040430 Rw6G040440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1553
AccII	CGCG	7 cut(s)	7, 21, 41, 81, 125, 175, 356
AciI	CCGC	3 cut(s)	39, 356, 521
AclWI	GGATC	3 cut(s)	258, 1055, 1140
AcoI	YGGCCR	1 cut(s)	109
AcsI	RAATTY	5 cut(s)	116, 983, 1026, 1041, 1054
AcuI	CTGAAG	1 cut(s)	1200
AfiI	CCNNNNNNNGG	5 cut(s)	577, 738, 858, 882, 1389
AflII	CTTAAG	1 cut(s)	470
AgeI	ACCGGT	1 cut(s)	1593
AgsI	TTSAA	9 cut(s)	307, 328, 350, 790, 849, 1031, 1343, 1364, 1484
AhlI	ACTAGT	1 cut(s)	1162
AjnI	CCWGG	4 cut(s)	64, 207, 857, 991
AluBI	AGCT	8 cut(s)	361, 917, 926, 959, 1346, 1490, 1535, 1580
AluI	AGCT	8 cut(s)	361, 917, 926, 959, 1346, 1490, 1535, 1580
Alw26I	GTCTC	2 cut(s)	141, 411
AlwI	GGATC	3 cut(s)	258, 1055, 1140
AoxI	GGCC	5 cut(s)	87, 109, 158, 544, 1298
ApeKI	GCWGC	6 cut(s)	152, 762, 1235, 1331, 1408, 1577
ApoI	RAATTY	5 cut(s)	116, 983, 1026, 1041, 1054
AsiGI	ACCGGT	1 cut(s)	1593
AspLEI	GCGC	6 cut(s)	7, 23, 103, 127, 356, 570
AspS9I	GGNCC	3 cut(s)	87, 424, 1380
AsuC2I	CCSGG	1 cut(s)	1377
AsuHPI	GGTGA	4 cut(s)	178, 379, 506, 1253
AsuII	TTCGAA	1 cut(s)	295
AvaII	GGWCC	2 cut(s)	424, 1380
AxyI	CCTNAGG	1 cut(s)	246
BanI	GGYRCC	1 cut(s)	1553
BanII	GRGCYC	1 cut(s)	865
BbsI	GAAGAC	1 cut(s)	172
BbvI	GCAGC	6 cut(s)	139, 774, 1222, 1343, 1395, 1589
BccI	CCATC	8 cut(s)	511, 729, 741, 806, 940, 962, 1451, 1565
BceAI	ACGGC	1 cut(s)	117
BcgI	CGANNNNNNTGC	4 cut(s)	410, 444, 1556, 1590
BciT130I	CCWGG	4 cut(s)	66, 209, 859, 993
BciVI	GTATCC	1 cut(s)	1101
BclI	TGATCA	2 cut(s)	610, 1414
BcnI	CCSGG	1 cut(s)	1377
BcoDI	GTCTC	2 cut(s)	141, 411
BcuI	ACTAGT	1 cut(s)	1162
BfaI	CTAG	3 cut(s)	311, 1163, 1487
BfmI	CTRYAG	2 cut(s)	633, 1072
BfrI	CTTAAG	1 cut(s)	470
BfuI	GTATCC	1 cut(s)	1101
BglII	AGATCT	1 cut(s)	605
BisI	GCNGC	7 cut(s)	153, 522, 763, 1236, 1332, 1409, 1578
BlpI	GCTNAGC	2 cut(s)	186, 1347
BlsI	GCNGC	7 cut(s)	154, 523, 764, 1237, 1333, 1410, 1579
Bme1390I	CCNGG	5 cut(s)	66, 209, 859, 993, 1377
Bme18I	GGWCC	2 cut(s)	424, 1380
BmgT120I	GGNCC	3 cut(s)	87, 424, 1380
BmiI	GGNNCC	4 cut(s)	88, 817, 1381, 1555
BmrFI	CCNGG	5 cut(s)	66, 209, 859, 993, 1377
BmsI	GCATC	9 cut(s)	237, 555, 700, 713, 921, 1234, 1434, 1467, 1573
BoxI	GACNNNNGTC	1 cut(s)	176
BpiI	GAAGAC	1 cut(s)	172
BpmI	CTGGAG	1 cut(s)	191
Bpu10I	CCTNAGC	1 cut(s)	281
Bpu1102I	GCTNAGC	2 cut(s)	186, 1347
Bpu14I	TTCGAA	1 cut(s)	295
BpuMI	CCSGG	1 cut(s)	1377
BsaJI	CCNNGG	5 cut(s)	64, 858, 906, 992, 1376
BsaWI	WCCGGW	2 cut(s)	335, 1593
Bsc4I	CCNNNNNNNGG	5 cut(s)	577, 738, 858, 882, 1389
Bse118I	RCCGGY	1 cut(s)	1593
Bse1I	ACTGG	4 cut(s)	60, 439, 1310, 1557
Bse21I	CCTNAGG	1 cut(s)	246
Bse3DI	GCAATG	2 cut(s)	385, 1519
BseBI	CCWGG	4 cut(s)	66, 209, 859, 993
BseDI	CCNNGG	5 cut(s)	64, 858, 906, 992, 1376
BseGI	GGATG	2 cut(s)	721, 817
BseLI	CCNNNNNNNGG	5 cut(s)	577, 738, 858, 882, 1389
BseMI	GCAATG	2 cut(s)	385, 1519
BseMII	CTCAG	3 cut(s)	177, 237, 1361
BseNI	ACTGG	4 cut(s)	60, 439, 1310, 1557
BseRI	GAGGAG	2 cut(s)	668, 812
BseX3I	CGGCCG	1 cut(s)	109
BseXI	GCAGC	6 cut(s)	139, 774, 1222, 1343, 1395, 1589
BsgI	GTGCAG	3 cut(s)	602, 1350, 1596
Bsh1236I	CGCG	7 cut(s)	7, 21, 41, 81, 125, 175, 356
Bsh1285I	CGRYCG	2 cut(s)	112, 142
BshFI	GGCC	5 cut(s)	89, 111, 160, 546, 1300
BshNI	GGYRCC	1 cut(s)	1553
BshTI	ACCGGT	1 cut(s)	1593
BsiEI	CGRYCG	2 cut(s)	112, 142
BsiSI	CCGG	5 cut(s)	112, 336, 1352, 1376, 1594
BslFI	GGGAC	3 cut(s)	47, 1355, 1393
BslI	CCNNNNNNNGG	5 cut(s)	577, 738, 858, 882, 1389
BsmAI	GTCTC	2 cut(s)	141, 411
BsmBI	CGTCTC	2 cut(s)	141, 411
BsmFI	GGGAC	3 cut(s)	47, 1355, 1393
BsnI	GGCC	5 cut(s)	89, 111, 160, 546, 1300
Bsp119I	TTCGAA	1 cut(s)	295
Bsp1286I	GDGCHC	1 cut(s)	865
Bsp1720I	GCTNAGC	2 cut(s)	186, 1347
BspACI	CCGC	3 cut(s)	39, 356, 521
BspANI	GGCC	5 cut(s)	89, 111, 160, 546, 1300
BspCNI	CTCAG	3 cut(s)	178, 238, 1360
BspFNI	CGCG	7 cut(s)	7, 21, 41, 81, 125, 175, 356
BspHI	TCATGA	2 cut(s)	613, 1189
BspLI	GGNNCC	4 cut(s)	88, 817, 1381, 1555
BspMAI	CTGCAG	1 cut(s)	1076
BspPI	GGATC	3 cut(s)	258, 1055, 1140
BspT104I	TTCGAA	1 cut(s)	295
BspT107I	GGYRCC	1 cut(s)	1553
BspTI	CTTAAG	1 cut(s)	470
BsrDI	GCAATG	2 cut(s)	385, 1519
BsrFI	RCCGGY	1 cut(s)	1593
BsrI	ACTGG	4 cut(s)	60, 439, 1310, 1557
BssAI	RCCGGY	1 cut(s)	1593
BssECI	CCNNGG	5 cut(s)	64, 858, 906, 992, 1376
Bst2UI	CCWGG	4 cut(s)	66, 209, 859, 993
Bst4CI	ACNGT	4 cut(s)	428, 674, 1127, 1183
BstAFI	CTTAAG	1 cut(s)	470
BstAPI	GCANNNNNTGC	3 cut(s)	710, 1012, 1583
BstBI	TTCGAA	1 cut(s)	295
BstC8I	GCNNGC	1 cut(s)	531
BstDEI	CTNAG	5 cut(s)	186, 246, 281, 1347, 1508
BstDSI	CCRYGG	1 cut(s)	906
BstENI	CCTNNNNNAGG	1 cut(s)	880
BstF5I	GGATG	2 cut(s)	721, 817
BstFNI	CGCG	7 cut(s)	7, 21, 41, 81, 125, 175, 356
BstHHI	GCGC	6 cut(s)	7, 23, 103, 127, 356, 570
BstMAI	GTCTC	2 cut(s)	141, 411
BstMCI	CGRYCG	2 cut(s)	112, 142
BstMWI	GCNNNNNNNGC	8 cut(s)	18, 530, 535, 710, 923, 1012, 1357, 1583
BstNI	CCWGG	4 cut(s)	66, 209, 859, 993
BstNSI	RCATGY	2 cut(s)	461, 1360
BstPAI	GACNNNNGTC	1 cut(s)	176
BstSCI	CCNGG	5 cut(s)	64, 207, 857, 991, 1375
BstSFI	CTRYAG	2 cut(s)	633, 1072
BstUI	CGCG	7 cut(s)	7, 21, 41, 81, 125, 175, 356
BstV1I	GCAGC	6 cut(s)	139, 774, 1222, 1343, 1395, 1589
BstV2I	GAAGAC	1 cut(s)	172
BstX2I	RGATCY	2 cut(s)	605, 1060
BstYI	RGATCY	2 cut(s)	605, 1060
BstZI	CGGCCG	1 cut(s)	109
Bsu36I	CCTNAGG	1 cut(s)	246
BsuI	GTATCC	1 cut(s)	1101
BsuRI	GGCC	5 cut(s)	89, 111, 160, 546, 1300
BtgI	CCRYGG	1 cut(s)	906
BtgZI	GCGATG	1 cut(s)	1470
BtsCI	GGATG	2 cut(s)	721, 817
BtsI	GCAGTG	2 cut(s)	852, 1269
BtsIMutI	CAGTG	3 cut(s)	852, 1132, 1269
Cac8I	GCNNGC	1 cut(s)	531
CciI	TCATGA	2 cut(s)	613, 1189
CfoI	GCGC	6 cut(s)	7, 23, 103, 127, 356, 570
Cfr10I	RCCGGY	1 cut(s)	1593
Cfr13I	GGNCC	3 cut(s)	87, 424, 1380
CseI	GACGC	4 cut(s)	30, 70, 158, 181
CspAI	ACCGGT	1 cut(s)	1593
CspCI	CAANNNNNGTGG	2 cut(s)	1518, 1553
CviAII	CATG	9 cut(s)	458, 577, 614, 808, 1190, 1210, 1264, 1357, 1444
DdeI	CTNAG	5 cut(s)	186, 246, 281, 1347, 1508
EaeI	YGGCCR	1 cut(s)	109
EagI	CGGCCG	1 cut(s)	109
EclXI	CGGCCG	1 cut(s)	109
Eco24I	GRGCYC	1 cut(s)	865
Eco32I	GATATC	1 cut(s)	33
Eco47I	GGWCC	2 cut(s)	424, 1380
Eco52I	CGGCCG	1 cut(s)	109
Eco57I	CTGAAG	1 cut(s)	1200
Eco81I	CCTNAGG	1 cut(s)	246
EcoNI	CCTNNNNNAGG	1 cut(s)	880
EcoO109I	RGGNCCY	2 cut(s)	87, 1380
EcoRI	GAATTC	1 cut(s)	1026
EcoRII	CCWGG	4 cut(s)	64, 207, 857, 991
EcoRV	GATATC	1 cut(s)	33
EcoT22I	ATGCAT	1 cut(s)	1603
EcoT38I	GRGCYC	1 cut(s)	865
Esp3I	CGTCTC	2 cut(s)	141, 411
FaeI	CATG	9 cut(s)	461, 580, 617, 811, 1193, 1213, 1267, 1360, 1447
FaqI	GGGAC	3 cut(s)	47, 1355, 1393
FatI	CATG	9 cut(s)	457, 576, 613, 807, 1189, 1209, 1263, 1356, 1443
FbaI	TGATCA	2 cut(s)	610, 1414
Fnu4HI	GCNGC	7 cut(s)	153, 522, 763, 1236, 1332, 1409, 1578
FokI	GGATG	2 cut(s)	708, 824
FriOI	GRGCYC	1 cut(s)	865
Fsp4HI	GCNGC	7 cut(s)	153, 522, 763, 1236, 1332, 1409, 1578
FspBI	CTAG	3 cut(s)	311, 1163, 1487
GlaI	GCGC	6 cut(s)	6, 22, 102, 126, 355, 569
GluI	GCNGC	7 cut(s)	153, 522, 763, 1236, 1332, 1409, 1578
GsuI	CTGGAG	1 cut(s)	191
HaeIII	GGCC	5 cut(s)	89, 111, 160, 546, 1300
HapII	CCGG	5 cut(s)	112, 336, 1352, 1376, 1594
HgaI	GACGC	4 cut(s)	30, 70, 158, 181
HhaI	GCGC	6 cut(s)	7, 23, 103, 127, 356, 570
Hin1II	CATG	9 cut(s)	461, 580, 617, 811, 1193, 1213, 1267, 1360, 1447
Hin6I	GCGC	6 cut(s)	5, 21, 101, 125, 354, 568
HinP1I	GCGC	6 cut(s)	5, 21, 101, 125, 354, 568
HincII	GTYRAC	1 cut(s)	1168
HindII	GTYRAC	1 cut(s)	1168
HinfI	GANTC	8 cut(s)	76, 177, 332, 370, 475, 771, 1169, 1281
HpaII	CCGG	5 cut(s)	112, 336, 1352, 1376, 1594
HphI	GGTGA	4 cut(s)	178, 379, 506, 1253
Hpy166II	GTNNAC	2 cut(s)	1000, 1168
Hpy188I	TCNGA	7 cut(s)	51, 144, 610, 709, 770, 982, 1522
Hpy188III	TCNNGA	6 cut(s)	254, 557, 614, 1037, 1190, 1311
Hpy8I	GTNNAC	2 cut(s)	1000, 1168
Hpy99I	CGWCG	2 cut(s)	86, 1568
HpyAV	CCTTC	8 cut(s)	187, 193, 581, 643, 679, 752, 1224, 1271
HpyCH4III	ACNGT	4 cut(s)	428, 674, 1127, 1183
HpyCH4IV	ACGT	2 cut(s)	400, 661
HpyCH4V	TGCA	9 cut(s)	302, 378, 583, 704, 1006, 1074, 1331, 1577, 1601
HpyF10VI	GCNNNNNNNGC	8 cut(s)	18, 530, 535, 710, 923, 1012, 1357, 1583
HpyF3I	CTNAG	5 cut(s)	186, 246, 281, 1347, 1508
HpySE526I	ACGT	2 cut(s)	400, 661
Hsp92II	CATG	9 cut(s)	461, 580, 617, 811, 1193, 1213, 1267, 1360, 1447
HspAI	GCGC	6 cut(s)	5, 21, 101, 125, 354, 568
Ksp22I	TGATCA	2 cut(s)	610, 1414
LmnI	GCTCC	2 cut(s)	358, 1313
Lsp1109I	GCAGC	6 cut(s)	139, 774, 1222, 1343, 1395, 1589
LweI	GCATC	9 cut(s)	237, 555, 700, 713, 921, 1234, 1434, 1467, 1573
MaeI	CTAG	3 cut(s)	311, 1163, 1487
MaeII	ACGT	2 cut(s)	400, 661
MaeIII	GTNAC	7 cut(s)	134, 401, 494, 591, 803, 1241, 1559
MboII	GAAGA	4 cut(s)	172, 763, 1252, 1580
MfeI	CAATTG	1 cut(s)	839
MflI	RGATCY	2 cut(s)	605, 1060
MhlI	GDGCHC	1 cut(s)	865
MlyI	GAGTC	4 cut(s)	186, 765, 1163, 1290
MmeI	TCCRAC	1 cut(s)	793
Mph1103I	ATGCAT	1 cut(s)	1603
MseI	TTAA	3 cut(s)	471, 942, 1547
MslI	CAYNNNNRTG	1 cut(s)	1475
MspA1I	CMGCKG	2 cut(s)	926, 1580
MspCI	CTTAAG	1 cut(s)	470
MspI	CCGG	5 cut(s)	112, 336, 1352, 1376, 1594
MspR9I	CCNGG	5 cut(s)	66, 209, 859, 993, 1377
MunI	CAATTG	1 cut(s)	839
MvaI	CCWGG	4 cut(s)	66, 209, 859, 993
MvnI	CGCG	7 cut(s)	7, 21, 41, 81, 125, 175, 356
MwoI	GCNNNNNNNGC	8 cut(s)	18, 530, 535, 710, 923, 1012, 1357, 1583
NciI	CCSGG	1 cut(s)	1377
NlaIII	CATG	9 cut(s)	461, 580, 617, 811, 1193, 1213, 1267, 1360, 1447
NlaIV	GGNNCC	4 cut(s)	88, 817, 1381, 1555
NmuCI	GTSAC	3 cut(s)	494, 803, 1241
NsiI	ATGCAT	1 cut(s)	1603
NspI	RCATGY	2 cut(s)	461, 1360
NspV	TTCGAA	1 cut(s)	295
PagI	TCATGA	2 cut(s)	613, 1189
PfeI	GAWTC	4 cut(s)	76, 332, 370, 475
PinAI	ACCGGT	1 cut(s)	1593
PkrI	GCNGC	7 cut(s)	154, 523, 764, 1237, 1333, 1410, 1579
Ple19I	CGATCG	1 cut(s)	142
PleI	GAGTC	4 cut(s)	185, 765, 1163, 1289
PpsI	GAGTC	4 cut(s)	185, 765, 1163, 1289
PpuMI	RGGWCCY	1 cut(s)	1380
PshAI	GACNNNNGTC	1 cut(s)	176
Psp5II	RGGWCCY	1 cut(s)	1380
Psp6I	CCWGG	4 cut(s)	64, 207, 857, 991
PspGI	CCWGG	4 cut(s)	64, 207, 857, 991
PspN4I	GGNNCC	4 cut(s)	88, 817, 1381, 1555
PspPI	GGNCC	3 cut(s)	87, 424, 1380
PspPPI	RGGWCCY	1 cut(s)	1380
PstI	CTGCAG	1 cut(s)	1076
PsuI	RGATCY	2 cut(s)	605, 1060
PvuI	CGATCG	1 cut(s)	142
PvuII	CAGCTG	2 cut(s)	926, 1580
RseI	CAYNNNNRTG	1 cut(s)	1475
SaqAI	TTAA	3 cut(s)	471, 942, 1547
SatI	GCNGC	7 cut(s)	153, 522, 763, 1236, 1332, 1409, 1578
Sau96I	GGNCC	3 cut(s)	87, 424, 1380
SchI	GAGTC	4 cut(s)	186, 765, 1163, 1290
ScrFI	CCNGG	5 cut(s)	66, 209, 859, 993, 1377
SduI	GDGCHC	1 cut(s)	865
SfaNI	GCATC	9 cut(s)	237, 555, 700, 713, 921, 1234, 1434, 1467, 1573
SfcI	CTRYAG	2 cut(s)	633, 1072
SfuI	TTCGAA	1 cut(s)	295
SinI	GGWCC	2 cut(s)	424, 1380
SmiMI	CAYNNNNRTG	1 cut(s)	1475
SmlI	CTYRAG	1 cut(s)	470
SmoI	CTYRAG	1 cut(s)	470
SpeI	ACTAGT	1 cut(s)	1162
SsiI	CCGC	3 cut(s)	39, 356, 521
SspMI	CTAG	3 cut(s)	311, 1163, 1487
StyD4I	CCNGG	5 cut(s)	64, 207, 857, 991, 1375
TaaI	ACNGT	4 cut(s)	428, 674, 1127, 1183
TaiI	ACGT	2 cut(s)	403, 664
TaqI	TCGA	4 cut(s)	92, 231, 263, 295
TauI	GCSGC	1 cut(s)	524
TfiI	GAWTC	4 cut(s)	76, 332, 370, 475
Tru1I	TTAA	3 cut(s)	471, 942, 1547
Tru9I	TTAA	3 cut(s)	471, 942, 1547
TscAI	CASTG	3 cut(s)	859, 1132, 1276
TseFI	GTSAC	3 cut(s)	494, 803, 1241
TseI	GCWGC	6 cut(s)	152, 762, 1235, 1331, 1408, 1577
Tsp45I	GTSAC	3 cut(s)	494, 803, 1241
TspDTI	ATGAA	1 cut(s)	1252
TspRI	CASTG	3 cut(s)	859, 1132, 1276
Vha464I	CTTAAG	1 cut(s)	470
VpaK11BI	GGWCC	2 cut(s)	424, 1380
XagI	CCTNNNNNAGG	1 cut(s)	880
XapI	RAATTY	5 cut(s)	116, 983, 1026, 1041, 1054
XceI	RCATGY	2 cut(s)	461, 1360
XspI	CTAG	3 cut(s)	311, 1163, 1487
Zsp2I	ATGCAT	1 cut(s)	1603

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.