Uncharacterized protein family UPF0054
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G25870 |
| fragaria_vesca | FvH4_2g35220 FvH4_2g35230 |
| malus_domestica | MD08G1110200.v1.1 MD08G1110300.v1.1 |
| prunus_persica | Prupe.1G444400_v2.0.a1 Prupe.1G444400_v2.0.a1 Prupe.1G444400_v2.0.a1 Prupe.1G444400_v2.0.a1 Prupe.1G444400_v2.0.a1 Prupe.1G444500_v2.0.a1 Prupe.1G444500_v2.0.a1 Prupe.1G444500_v2.0.a1 |
| pyrus_communis | pycom08g09180 pycom15g08410 |
| rosa_chinensis | RchiOBHm_Chr6g0306701 RchiOBHm_Chr6g0306711 |
| rosa_laevigata | RLG00000010771 RLG00000010772 |
| rosa_multiflora | Rmu_sc0005201.1_g000001 Rmu_sc0017725.1_g000001 Rmu_sc0017785.1_g000007 Rmu_sc0017785.1_g000008 Rmu_sc0017786.1_g000007 |
| rosa_roxburghii | Rroxscaffold_7G00161520 Rroxscaffold_7G00161530 |
| rosa_rugosa | Rorug06G0351700 Rorug06G0351700 |
| rosa_samantha | Rh6AG464100 Rh6AG464200 Rh6BG436800 Rh6BG436900 Rh6CG478300 Rh6DG465000 Rh6DG465100 |
| rosa_wichuraiana | Rw6G040430 Rw6G040440 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 795 |
| AccB1I | GGYRCC | 1 cut(s) | 1571 |
| AccII | CGCG | 8 cut(s) | 7, 21, 41, 81, 125, 175, 362, 954 |
| AciI | CCGC | 5 cut(s) | 39, 362, 527, 1595, 1612 |
| AclWI | GGATC | 2 cut(s) | 264, 1073 |
| AcoI | YGGCCR | 2 cut(s) | 109, 1557 |
| AcsI | RAATTY | 3 cut(s) | 116, 1001, 1059 |
| AcuI | CTGAAG | 1 cut(s) | 1218 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 583, 753, 876, 900 |
| AflII | CTTAAG | 1 cut(s) | 476 |
| AgeI | ACCGGT | 2 cut(s) | 926, 1152 |
| AgsI | TTSAA | 8 cut(s) | 313, 334, 356, 808, 867, 1049, 1361, 1382 |
| AjnI | CCWGG | 5 cut(s) | 64, 213, 875, 1009, 1393 |
| AluBI | AGCT | 7 cut(s) | 211, 367, 935, 944, 977, 1504, 1553 |
| AluI | AGCT | 7 cut(s) | 211, 367, 935, 944, 977, 1504, 1553 |
| Alw21I | GWGCWC | 2 cut(s) | 213, 1160 |
| Alw26I | GTCTC | 3 cut(s) | 141, 417, 1529 |
| AlwI | GGATC | 2 cut(s) | 264, 1073 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1273 |
| Ama87I | CYCGRG | 1 cut(s) | 1159 |
| AoxI | GGCC | 7 cut(s) | 87, 109, 158, 550, 988, 1316, 1557 |
| ApeKI | GCWGC | 4 cut(s) | 152, 780, 1253, 1256 |
| ApoI | RAATTY | 3 cut(s) | 116, 1001, 1059 |
| AsiGI | ACCGGT | 2 cut(s) | 926, 1152 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1386 |
| AspLEI | GCGC | 7 cut(s) | 7, 23, 103, 127, 362, 576, 954 |
| AspS9I | GGNCC | 2 cut(s) | 430, 1150 |
| AsuHPI | GGTGA | 5 cut(s) | 178, 356, 385, 512, 1166 |
| AsuII | TTCGAA | 1 cut(s) | 301 |
| AvaI | CYCGRG | 1 cut(s) | 1159 |
| AvaII | GGWCC | 2 cut(s) | 430, 1150 |
| AxyI | CCTNAGG | 1 cut(s) | 252 |
| BalI | TGGCCA | 1 cut(s) | 1559 |
| BanI | GGYRCC | 1 cut(s) | 1571 |
| BanII | GRGCYC | 2 cut(s) | 213, 883 |
| BbsI | GAAGAC | 2 cut(s) | 172, 1270 |
| Bbv12I | GWGCWC | 2 cut(s) | 213, 1160 |
| BbvCI | CCTCAGC | 1 cut(s) | 1293 |
| BbvI | GCAGC | 4 cut(s) | 139, 792, 1240, 1243 |
| BccI | CCATC | 8 cut(s) | 341, 517, 744, 824, 958, 980, 1469, 1583 |
| BceAI | ACGGC | 2 cut(s) | 117, 1303 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 416, 450, 1574, 1608 |
| BciT130I | CCWGG | 5 cut(s) | 66, 215, 877, 1011, 1395 |
| BclI | TGATCA | 3 cut(s) | 616, 1171, 1432 |
| BcoDI | GTCTC | 3 cut(s) | 141, 417, 1529 |
| BfaI | CTAG | 1 cut(s) | 317 |
| BfmI | CTRYAG | 2 cut(s) | 639, 1090 |
| BfrI | CTTAAG | 1 cut(s) | 476 |
| BisI | GCNGC | 6 cut(s) | 153, 528, 781, 1254, 1257, 1596 |
| BlpI | GCTNAGC | 1 cut(s) | 186 |
| BlsI | GCNGC | 6 cut(s) | 154, 529, 782, 1255, 1258, 1597 |
| Bme1390I | CCNGG | 5 cut(s) | 66, 215, 877, 1011, 1395 |
| Bme18I | GGWCC | 2 cut(s) | 430, 1150 |
| BmeT110I | CYCGRG | 1 cut(s) | 1159 |
| BmgT120I | GGNCC | 2 cut(s) | 430, 1150 |
| BmiI | GGNNCC | 4 cut(s) | 835, 1128, 1399, 1573 |
| BmrFI | CCNGG | 5 cut(s) | 66, 215, 877, 1011, 1395 |
| BmsI | GCATC | 6 cut(s) | 243, 561, 939, 1177, 1485, 1591 |
| BoxI | GACNNNNGTC | 1 cut(s) | 176 |
| BpiI | GAAGAC | 2 cut(s) | 172, 1270 |
| BpmI | CTGGAG | 2 cut(s) | 197, 1359 |
| Bpu10I | CCTNAGC | 2 cut(s) | 287, 1293 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 186 |
| Bpu14I | TTCGAA | 1 cut(s) | 301 |
| BpuEI | CTTGAG | 2 cut(s) | 1333, 1520 |
| BsaJI | CCNNGG | 4 cut(s) | 64, 876, 1010, 1393 |
| BsaWI | WCCGGW | 2 cut(s) | 926, 1152 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 583, 753, 876, 900 |
| Bse118I | RCCGGY | 2 cut(s) | 926, 1152 |
| Bse1I | ACTGG | 4 cut(s) | 60, 445, 1278, 1342 |
| Bse21I | CCTNAGG | 1 cut(s) | 252 |
| Bse3DI | GCAATG | 2 cut(s) | 391, 1134 |
| BseBI | CCWGG | 5 cut(s) | 66, 215, 877, 1011, 1395 |
| BseDI | CCNNGG | 4 cut(s) | 64, 876, 1010, 1393 |
| BseGI | GGATG | 2 cut(s) | 736, 835 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 583, 753, 876, 900 |
| BseMI | GCAATG | 2 cut(s) | 391, 1134 |
| BseMII | CTCAG | 4 cut(s) | 177, 243, 1284, 1540 |
| BseNI | ACTGG | 4 cut(s) | 60, 445, 1278, 1342 |
| BseRI | GAGGAG | 2 cut(s) | 674, 830 |
| BseX3I | CGGCCG | 1 cut(s) | 109 |
| BseXI | GCAGC | 4 cut(s) | 139, 792, 1240, 1243 |
| BsgI | GTGCAG | 1 cut(s) | 608 |
| Bsh1236I | CGCG | 8 cut(s) | 7, 21, 41, 81, 125, 175, 362, 954 |
| Bsh1285I | CGRYCG | 2 cut(s) | 112, 142 |
| BshFI | GGCC | 7 cut(s) | 89, 111, 160, 552, 990, 1318, 1559 |
| BshNI | GGYRCC | 1 cut(s) | 1571 |
| BshTI | ACCGGT | 2 cut(s) | 926, 1152 |
| BsiEI | CGRYCG | 2 cut(s) | 112, 142 |
| BsiHKAI | GWGCWC | 2 cut(s) | 213, 1160 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1159 |
| BsiSI | CCGG | 4 cut(s) | 112, 927, 1153, 1370 |
| BslFI | GGGAC | 1 cut(s) | 47 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 583, 753, 876, 900 |
| BsmAI | GTCTC | 3 cut(s) | 141, 417, 1529 |
| BsmBI | CGTCTC | 2 cut(s) | 141, 417 |
| BsmFI | GGGAC | 1 cut(s) | 47 |
| BsmI | GAATGC | 1 cut(s) | 1139 |
| BsnI | GGCC | 7 cut(s) | 89, 111, 160, 552, 990, 1318, 1559 |
| BsoBI | CYCGRG | 1 cut(s) | 1159 |
| Bsp119I | TTCGAA | 1 cut(s) | 301 |
| Bsp1286I | GDGCHC | 3 cut(s) | 213, 883, 1160 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 186 |
| BspACI | CCGC | 5 cut(s) | 39, 362, 527, 1595, 1612 |
| BspANI | GGCC | 7 cut(s) | 89, 111, 160, 552, 990, 1318, 1559 |
| BspCNI | CTCAG | 4 cut(s) | 178, 244, 1285, 1539 |
| BspFNI | CGCG | 8 cut(s) | 7, 21, 41, 81, 125, 175, 362, 954 |
| BspHI | TCATGA | 2 cut(s) | 619, 1207 |
| BspLI | GGNNCC | 4 cut(s) | 835, 1128, 1399, 1573 |
| BspMAI | CTGCAG | 1 cut(s) | 1094 |
| BspPI | GGATC | 2 cut(s) | 264, 1073 |
| BspT104I | TTCGAA | 1 cut(s) | 301 |
| BspT107I | GGYRCC | 1 cut(s) | 1571 |
| BspTI | CTTAAG | 1 cut(s) | 476 |
| BsrDI | GCAATG | 2 cut(s) | 391, 1134 |
| BsrFI | RCCGGY | 2 cut(s) | 926, 1152 |
| BsrI | ACTGG | 4 cut(s) | 60, 445, 1278, 1342 |
| BssAI | RCCGGY | 2 cut(s) | 926, 1152 |
| BssECI | CCNNGG | 4 cut(s) | 64, 876, 1010, 1393 |
| Bst2UI | CCWGG | 5 cut(s) | 66, 215, 877, 1011, 1395 |
| Bst4CI | ACNGT | 5 cut(s) | 434, 680, 1201, 1354, 1366 |
| BstAFI | CTTAAG | 1 cut(s) | 476 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1030 |
| BstBI | TTCGAA | 1 cut(s) | 301 |
| BstC8I | GCNNGC | 3 cut(s) | 537, 1506, 1576 |
| BstDEI | CTNAG | 5 cut(s) | 186, 252, 287, 1293, 1526 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 898 |
| BstF5I | GGATG | 2 cut(s) | 736, 835 |
| BstFNI | CGCG | 8 cut(s) | 7, 21, 41, 81, 125, 175, 362, 954 |
| BstHHI | GCGC | 7 cut(s) | 7, 23, 103, 127, 362, 576, 954 |
| BstMAI | GTCTC | 3 cut(s) | 141, 417, 1529 |
| BstMCI | CGRYCG | 2 cut(s) | 112, 142 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 18, 536, 541, 941, 1030, 1375, 1601 |
| BstNI | CCWGG | 5 cut(s) | 66, 215, 877, 1011, 1395 |
| BstNSI | RCATGY | 3 cut(s) | 467, 1104, 1378 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 176 |
| BstSCI | CCNGG | 5 cut(s) | 64, 213, 875, 1009, 1393 |
| BstSFI | CTRYAG | 2 cut(s) | 639, 1090 |
| BstUI | CGCG | 8 cut(s) | 7, 21, 41, 81, 125, 175, 362, 954 |
| BstV1I | GCAGC | 4 cut(s) | 139, 792, 1240, 1243 |
| BstV2I | GAAGAC | 2 cut(s) | 172, 1270 |
| BstX2I | RGATCY | 1 cut(s) | 1078 |
| BstYI | RGATCY | 1 cut(s) | 1078 |
| BstZI | CGGCCG | 1 cut(s) | 109 |
| Bsu36I | CCTNAGG | 1 cut(s) | 252 |
| BsuRI | GGCC | 7 cut(s) | 89, 111, 160, 552, 990, 1318, 1559 |
| BtgZI | GCGATG | 1 cut(s) | 1488 |
| BtsCI | GGATG | 2 cut(s) | 736, 835 |
| BtsI | GCAGTG | 3 cut(s) | 870, 1287, 1417 |
| BtsIMutI | CAGTG | 4 cut(s) | 870, 1287, 1350, 1417 |
| Cac8I | GCNNGC | 3 cut(s) | 537, 1506, 1576 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1273 |
| CciI | TCATGA | 2 cut(s) | 619, 1207 |
| CfoI | GCGC | 7 cut(s) | 7, 23, 103, 127, 362, 576, 954 |
| Cfr10I | RCCGGY | 2 cut(s) | 926, 1152 |
| Cfr13I | GGNCC | 2 cut(s) | 430, 1150 |
| CseI | GACGC | 5 cut(s) | 30, 70, 158, 181, 943 |
| CspAI | ACCGGT | 2 cut(s) | 926, 1152 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1536, 1571 |
| DdeI | CTNAG | 5 cut(s) | 186, 252, 287, 1293, 1526 |
| EaeI | YGGCCR | 2 cut(s) | 109, 1557 |
| EagI | CGGCCG | 1 cut(s) | 109 |
| Ecl136II | GAGCTC | 1 cut(s) | 211 |
| EclXI | CGGCCG | 1 cut(s) | 109 |
| Eco147I | AGGCCT | 1 cut(s) | 89 |
| Eco24I | GRGCYC | 2 cut(s) | 213, 883 |
| Eco32I | GATATC | 1 cut(s) | 33 |
| Eco47I | GGWCC | 2 cut(s) | 430, 1150 |
| Eco52I | CGGCCG | 1 cut(s) | 109 |
| Eco53kI | GAGCTC | 1 cut(s) | 211 |
| Eco57I | CTGAAG | 1 cut(s) | 1218 |
| Eco81I | CCTNAGG | 1 cut(s) | 252 |
| Eco88I | CYCGRG | 1 cut(s) | 1159 |
| EcoICRI | GAGCTC | 1 cut(s) | 211 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 898 |
| EcoRII | CCWGG | 5 cut(s) | 64, 213, 875, 1009, 1393 |
| EcoRV | GATATC | 1 cut(s) | 33 |
| EcoT22I | ATGCAT | 1 cut(s) | 1197 |
| EcoT38I | GRGCYC | 2 cut(s) | 213, 883 |
| Esp3I | CGTCTC | 2 cut(s) | 141, 417 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 975, 1007 |
| FaqI | GGGAC | 1 cut(s) | 47 |
| FauNDI | CATATG | 1 cut(s) | 1180 |
| FbaI | TGATCA | 3 cut(s) | 616, 1171, 1432 |
| Fnu4HI | GCNGC | 6 cut(s) | 153, 528, 781, 1254, 1257, 1596 |
| FokI | GGATG | 2 cut(s) | 723, 842 |
| FriOI | GRGCYC | 2 cut(s) | 213, 883 |
| Fsp4HI | GCNGC | 6 cut(s) | 153, 528, 781, 1254, 1257, 1596 |
| FspBI | CTAG | 1 cut(s) | 317 |
| GlaI | GCGC | 7 cut(s) | 6, 22, 102, 126, 361, 575, 953 |
| GluI | GCNGC | 6 cut(s) | 153, 528, 781, 1254, 1257, 1596 |
| GsuI | CTGGAG | 2 cut(s) | 197, 1359 |
| HaeIII | GGCC | 7 cut(s) | 89, 111, 160, 552, 990, 1318, 1559 |
| HapII | CCGG | 4 cut(s) | 112, 927, 1153, 1370 |
| HgaI | GACGC | 5 cut(s) | 30, 70, 158, 181, 943 |
| HhaI | GCGC | 7 cut(s) | 7, 23, 103, 127, 362, 576, 954 |
| Hin6I | GCGC | 7 cut(s) | 5, 21, 101, 125, 360, 574, 952 |
| HinP1I | GCGC | 7 cut(s) | 5, 21, 101, 125, 360, 574, 952 |
| HinfI | GANTC | 7 cut(s) | 76, 177, 338, 376, 481, 1162, 1443 |
| HpaII | CCGG | 4 cut(s) | 112, 927, 1153, 1370 |
| HphI | GGTGA | 5 cut(s) | 178, 356, 385, 512, 1166 |
| Hpy166II | GTNNAC | 1 cut(s) | 1018 |
| Hpy188I | TCNGA | 6 cut(s) | 51, 144, 730, 788, 1000, 1330 |
| Hpy188III | TCNNGA | 5 cut(s) | 260, 563, 620, 1055, 1208 |
| Hpy8I | GTNNAC | 1 cut(s) | 1018 |
| Hpy99I | CGWCG | 3 cut(s) | 46, 86, 1586 |
| HpyAV | CCTTC | 8 cut(s) | 187, 193, 199, 587, 649, 685, 770, 1242 |
| HpyCH4III | ACNGT | 5 cut(s) | 434, 680, 1201, 1354, 1366 |
| HpyCH4IV | ACGT | 2 cut(s) | 406, 667 |
| HpyCH4V | TGCA | 9 cut(s) | 308, 384, 589, 710, 1024, 1092, 1139, 1195, 1604 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 18, 536, 541, 941, 1030, 1375, 1601 |
| HpyF3I | CTNAG | 5 cut(s) | 186, 252, 287, 1293, 1526 |
| HpySE526I | ACGT | 2 cut(s) | 406, 667 |
| HspAI | GCGC | 7 cut(s) | 5, 21, 101, 125, 360, 574, 952 |
| Ksp22I | TGATCA | 3 cut(s) | 616, 1171, 1432 |
| LmnI | GCTCC | 4 cut(s) | 208, 216, 364, 1535 |
| Lsp1109I | GCAGC | 4 cut(s) | 139, 792, 1240, 1243 |
| LweI | GCATC | 6 cut(s) | 243, 561, 939, 1177, 1485, 1591 |
| MaeI | CTAG | 1 cut(s) | 317 |
| MaeII | ACGT | 2 cut(s) | 406, 667 |
| MaeIII | GTNAC | 5 cut(s) | 134, 407, 500, 597, 821 |
| MboII | GAAGA | 4 cut(s) | 172, 781, 1270, 1598 |
| MfeI | CAATTG | 1 cut(s) | 857 |
| MflI | RGATCY | 1 cut(s) | 1078 |
| MhlI | GDGCHC | 3 cut(s) | 213, 883, 1160 |
| MlsI | TGGCCA | 1 cut(s) | 1559 |
| MluCI | AATT | 5 cut(s) | 116, 281, 857, 1001, 1059 |
| MluNI | TGGCCA | 1 cut(s) | 1559 |
| MlyI | GAGTC | 2 cut(s) | 186, 1171 |
| MmeI | TCCRAC | 1 cut(s) | 771 |
| Mox20I | TGGCCA | 1 cut(s) | 1559 |
| Mph1103I | ATGCAT | 1 cut(s) | 1197 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1386 |
| MscI | TGGCCA | 1 cut(s) | 1559 |
| MseI | TTAA | 2 cut(s) | 477, 960 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1179 |
| Msp20I | TGGCCA | 1 cut(s) | 1559 |
| MspA1I | CMGCKG | 1 cut(s) | 944 |
| MspCI | CTTAAG | 1 cut(s) | 476 |
| MspI | CCGG | 4 cut(s) | 112, 927, 1153, 1370 |
| MspR9I | CCNGG | 5 cut(s) | 66, 215, 877, 1011, 1395 |
| MunI | CAATTG | 1 cut(s) | 857 |
| Mva1269I | GAATGC | 1 cut(s) | 1139 |
| MvaI | CCWGG | 5 cut(s) | 66, 215, 877, 1011, 1395 |
| MvnI | CGCG | 8 cut(s) | 7, 21, 41, 81, 125, 175, 362, 954 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 18, 536, 541, 941, 1030, 1375, 1601 |
| NdeI | CATATG | 1 cut(s) | 1180 |
| NlaIV | GGNNCC | 4 cut(s) | 835, 1128, 1399, 1573 |
| NmuCI | GTSAC | 2 cut(s) | 500, 821 |
| NsiI | ATGCAT | 1 cut(s) | 1197 |
| NspI | RCATGY | 3 cut(s) | 467, 1104, 1378 |
| NspV | TTCGAA | 1 cut(s) | 301 |
| PaeR7I | CTCGAG | 1 cut(s) | 1159 |
| PagI | TCATGA | 2 cut(s) | 619, 1207 |
| PceI | AGGCCT | 1 cut(s) | 89 |
| PctI | GAATGC | 1 cut(s) | 1139 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1386 |
| PfeI | GAWTC | 5 cut(s) | 76, 338, 376, 481, 1443 |
| PinAI | ACCGGT | 2 cut(s) | 926, 1152 |
| PkrI | GCNGC | 6 cut(s) | 154, 529, 782, 1255, 1258, 1597 |
| Ple19I | CGATCG | 1 cut(s) | 142 |
| PleI | GAGTC | 2 cut(s) | 185, 1170 |
| PpsI | GAGTC | 2 cut(s) | 185, 1170 |
| PshAI | GACNNNNGTC | 1 cut(s) | 176 |
| PsiI | TTATAA | 1 cut(s) | 795 |
| Psp124BI | GAGCTC | 1 cut(s) | 213 |
| Psp6I | CCWGG | 5 cut(s) | 64, 213, 875, 1009, 1393 |
| PspGI | CCWGG | 5 cut(s) | 64, 213, 875, 1009, 1393 |
| PspN4I | GGNNCC | 4 cut(s) | 835, 1128, 1399, 1573 |
| PspPI | GGNCC | 2 cut(s) | 430, 1150 |
| PspXI | VCTCGAGB | 1 cut(s) | 1159 |
| PstI | CTGCAG | 1 cut(s) | 1094 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1273 |
| PsuI | RGATCY | 1 cut(s) | 1078 |
| PvuI | CGATCG | 1 cut(s) | 142 |
| PvuII | CAGCTG | 1 cut(s) | 944 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1179 |
| SacI | GAGCTC | 1 cut(s) | 213 |
| SaqAI | TTAA | 2 cut(s) | 477, 960 |
| SatI | GCNGC | 6 cut(s) | 153, 528, 781, 1254, 1257, 1596 |
| Sau96I | GGNCC | 2 cut(s) | 430, 1150 |
| SchI | GAGTC | 2 cut(s) | 186, 1171 |
| ScrFI | CCNGG | 5 cut(s) | 66, 215, 877, 1011, 1395 |
| SduI | GDGCHC | 3 cut(s) | 213, 883, 1160 |
| SfaNI | GCATC | 6 cut(s) | 243, 561, 939, 1177, 1485, 1591 |
| SfcI | CTRYAG | 2 cut(s) | 639, 1090 |
| Sfr274I | CTCGAG | 1 cut(s) | 1159 |
| SfuI | TTCGAA | 1 cut(s) | 301 |
| SinI | GGWCC | 2 cut(s) | 430, 1150 |
| SlaI | CTCGAG | 1 cut(s) | 1159 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1179 |
| SmlI | CTYRAG | 4 cut(s) | 476, 1159, 1312, 1499 |
| SmoI | CTYRAG | 4 cut(s) | 476, 1159, 1312, 1499 |
| Sse9I | AATT | 5 cut(s) | 116, 281, 857, 1001, 1059 |
| SseBI | AGGCCT | 1 cut(s) | 89 |
| SsiI | CCGC | 5 cut(s) | 39, 362, 527, 1595, 1612 |
| SspMI | CTAG | 1 cut(s) | 317 |
| SstI | GAGCTC | 1 cut(s) | 213 |
| StuI | AGGCCT | 1 cut(s) | 89 |
| StyD4I | CCNGG | 5 cut(s) | 64, 213, 875, 1009, 1393 |
| TaaI | ACNGT | 5 cut(s) | 434, 680, 1201, 1354, 1366 |
| TaiI | ACGT | 2 cut(s) | 409, 670 |
| TaqI | TCGA | 6 cut(s) | 84, 92, 237, 269, 301, 1160 |
| TasI | AATT | 5 cut(s) | 116, 281, 857, 1001, 1059 |
| TauI | GCSGC | 2 cut(s) | 530, 1598 |
| TfiI | GAWTC | 5 cut(s) | 76, 338, 376, 481, 1443 |
| Tru1I | TTAA | 2 cut(s) | 477, 960 |
| Tru9I | TTAA | 2 cut(s) | 477, 960 |
| TscAI | CASTG | 4 cut(s) | 877, 1294, 1357, 1417 |
| TseFI | GTSAC | 2 cut(s) | 500, 821 |
| TseI | GCWGC | 4 cut(s) | 152, 780, 1253, 1256 |
| Tsp45I | GTSAC | 2 cut(s) | 500, 821 |
| TspDTI | ATGAA | 1 cut(s) | 1270 |
| TspRI | CASTG | 4 cut(s) | 877, 1294, 1357, 1417 |
| Vha464I | CTTAAG | 1 cut(s) | 476 |
| VpaK11BI | GGWCC | 2 cut(s) | 430, 1150 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 898 |
| XapI | RAATTY | 3 cut(s) | 116, 1001, 1059 |
| XceI | RCATGY | 3 cut(s) | 467, 1104, 1378 |
| XhoI | CTCGAG | 1 cut(s) | 1159 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1386 |
| XspI | CTAG | 1 cut(s) | 317 |
| Zsp2I | ATGCAT | 1 cut(s) | 1197 |