Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0006269

Physical Location & Seq

Genomic Coordinates Forward (+)

732803 .. 736725

Gene Structure 3923 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g01420.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2472 bp

ATGCAATCGACCATGGCAACTGCAAGAGCCAATGTCTTACTGCATTCCTTTTGTTTCATAGCGGTTCTTGCTTCTGTGTTGCTTACTGGTTTTGCAGCAGAAGATCCAGCTATATACTTGGTTTTGATGGAAGGAGAATCTGTTGCATTCCATGGAGGCTCACCATCTTCACACCTCAACTTAAACAGTGAGGTTCTGAAAGCTCATGCAATGCAATTGGAGGATTCTCATGATCAACTTCTACAGAGCAATCTCGAGACTGGAAGCTACAGCAAGCTTTACAGCTTTAAACACATTGCAAATGGCTTTGCTGTCCATACAACACCTTCTCAGGCTGAAAAGCTGAAATATTCTCCAGGAGTAAAGATGGTTGAGAGAGATAGAGGAGCAAAGTTGATGACAACGTACACTCCTCGCTTCCTTGAATTACCTGAAGGAGTGTGGACACAAGAAGGAGGCCAACGTAATGCTGGTGAAGGAATTGTGATTGGATTTGTGGATACTGGCATTAACCCTGCACATCTAAGTTTTTCTTATAATCCTCTGAGACCTTTCACCTCTAATATTTCTCATTTTTCGGGTGCTTGTGAGACTGGTCCTCTATTCCCAGCAACCTCATGCAATGGCAAAATAGTTTCAGCCAAGTTTTTCTCTGCTGGGGCTCGAGCTGTTGCTACTCTTAATGCCTCAGTCGATATTCTTTCACCATTTGATGCAGATGGACATGGCAGTCATGTGGCATCAGTTGCTGCTGGAAATGCTGGAGTTCCTGTGGTTGTGAATGGCTTCTGTTATGGGCAAGCTAGTGGAATGGCACCACGTGCCCGGATTGCTGTATATAAAGCTGTGTATCCTACAGTAGGAACTTTAGCAGATGTGATTTCTGCAATGGATCAAGCAATTCGAGATGGAGTGGATGTCCTAACACTTTCTGTCGGACCAGATGAACCACCAGAGGATAGAGTGACCTTCTTAAGCATGTTTGATGTGTTCATGTTATATGCTCGACGTGCTGGGGTTTTCGTGGTGCAAGCAGCAGGTAATCGAGGGCCAGACCCTTCAAGTGTAGTGTCTTACAGCCCTTGGGCTGTAGGTGTAGCTTCTTCCGGCACAGATAGGATTTATCCTTCTTCTATTGCTCTTGGAAATGGAGAAAGAATTGAAGGTGTCGGATTATCAGGACCGACTTTTGGATATAGGTTACTTCAACATAGGTTGGTTTTGGCCAAGGATGCAATTAATCCAATTGGATCATTCCCAAGAACCCCACCCTATGTTGAAGAGTGCCAAACTCCACAAGCATTGGATGCTAGGTTAGTTATAGGTAGTATTGTCATCTGCACATTCTCAGAGGGATTCTATAACGGGACATCCACCCTTAATGCCATCATCAACACGGCAAGAGCTCTCGGATTTATGGGTTTTGTTCTTGTTGCAAATCCAGCCTATGGTGACTTCATTGCAGAGCCTGTTCCTTTTGCTGTTTCGGGAATTTTGGTCCCAAATGTAACCAATTCCCAGGTTATATTACAATACTATGAACAACAAACATTCAAGGATGCGAGAGGCTTCCCTACTAGACTTGCAGCAAGAGCATCAATTGGAGAAGGAAGAGCTGCTTCTTTCAGGGGCCAAGCACCTATTGTCAGCAGATTCTCTTCAAGAGGACCAAATATCATAGACAGAGCCAGGAAGCCTGCTGATGTACTAAAGCCGGATATTCTTGCCCCGGGACACCAAATTTGGGGAGCTTGGAGCCCGATTAGTGCCTTAGAACCCTCTTTAGCCGGACACAGTTTTGCGCTACTATCTGGTACAAGCATGGCAACACCTCATATCGCTGGAATAGCCGCACTTATTAAGCAGTACAATCCTTCATGGAATCCTTCCATGATTGCATCTGCGATTTCCACCACAGCAGCCAAGTATGATAAAAATGGAGAACTGATAATGGCTGAAGGATCTGATATAGGCAGTCAATATCCCTCCACCCCTTTTGACTCTGGAGCTGGCCTTGTCAGTCCAAGTAATGCAATGGATCCAGGCCTTGTCTTATCTTCAGGATATGAAGACTACATCAGCTTCCTGTGCTCATTGCATGATACCAATCCAGGTACAATAAAAACTGTCACCGGAGAATTGTGCAACAAGCCACTTGACCATCCAGCCAATCTGAACCTTCCTTCAGTGACATTATCAGCATTGAATGGGTCCGAAATAGTACGAAGAGTTTTCATGAATGTAGGGAGCAAGCCGGAGAGTTACTCTAGCTCGGCGCTGCCACCAAATGGGACCACAATCGACATATCTCCACCTTCGTTTACCATAGCTCCACAGGGCACTCAAGAGCTAGTTATACAGTTCAATGTGACCCAAGCAATGAACCAATTCACCTTTGGTGAACTCATTCTTACTGGAAGTTTAAATCATATCGTTAGGCTACCTTTATCAGTTCTTCCAGTTTCTATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0006508 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0016787 GO:0017171 GO:0019538 GO:0032501 GO:0032502 GO:0042335 GO:0043170 GO:0044238 GO:0048856 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 Peptidase_S8

Protein Analysis

824

Amino Acids

87.15

Weight (kDa)

5.92

Isoelectric Point (pI)

32.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	71 - 132	2.8e-12	Peptidase inhibitor I9
Peptidase_S8	PF00082	158 - 645	1.3e-41	Subtilase family
fn3_6	PF17766	724 - 818	2.1e-15	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006269)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G62340
fragaria_vesca	FvH4_3g01420
malus_domestica	MD05G1352200.v1.1 MD10G1326200.v1.1
prunus_persica	Prupe.4G015500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0002151 RchiOBHm_Chr5g0002191
rosa_laevigata	RLG00000031001 RLG00000031002 RLG00000031007
rosa_multiflora	Rmu_co8154878.1_g000001 Rmu_sc0001492.1_g000001 Rmu_sc0007900.1_g000001 Rmu_sc0013155.1_g000003 Rmu_ssc0000001.1_g000005
rosa_roxburghii	Rroxscaffold_1G00073760
rosa_rugosa	Rorug04G0394700
rosa_samantha	Rh5AG016500 Rh5AG016600 Rh5AG017100 Rh5BG020000 Rh5CG017800 Rh5CG017900 Rh5CG018800 Rh5DG018000
rosa_wichuraiana	Rw2G029690 Rw5G001610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	537
AasI	GACNNNNNNGTC	1 cut(s)	729
Acc36I	ACCTGC	1 cut(s)	1028
AccB1I	GGYRCC	1 cut(s)	814
AccB7I	CCANNNNNTGG	2 cut(s)	1448, 2288
AciI	CCGC	2 cut(s)	62, 1851
AclWI	GGATC	6 cut(s)	98, 900, 1258, 1969, 2033, 2046
AcoI	YGGCCR	1 cut(s)	1224
AcsI	RAATTY	2 cut(s)	1491, 1740
AcuI	CTGAAG	4 cut(s)	453, 1977, 2043, 2169
AcvI	CACGTG	1 cut(s)	821
AdeI	CACNNNGTG	1 cut(s)	821
AfaI	GTAC	6 cut(s)	407, 1707, 1816, 1868, 2116, 2223
AfiI	CCNNNNNNNGG	5 cut(s)	860, 1190, 1448, 1744, 2288
AflII	CTTAAG	1 cut(s)	973
AgsI	TTSAA	9 cut(s)	425, 1062, 1163, 1208, 1280, 1555, 1662, 2206, 2365
AjiI	CACGTC	1 cut(s)	1010
AjnI	CCWGG	5 cut(s)	355, 1518, 1688, 2041, 2110
Alw21I	GWGCWC	2 cut(s)	1408, 2093
Alw26I	GTCTC	3 cut(s)	251, 541, 584
AlwI	GGATC	6 cut(s)	98, 900, 1258, 1969, 2033, 2046
AlwNI	CAGNNNCTG	2 cut(s)	749, 1469
Ama87I	CYCGRG	3 cut(s)	254, 663, 1729
AoxI	GGCC	6 cut(s)	457, 1049, 1224, 1630, 2011, 2044
ApeKI	GCWGC	7 cut(s)	95, 749, 1034, 1586, 1616, 1919, 2278
ApoI	RAATTY	2 cut(s)	1491, 1740
ArsI	GACNNNNNNTTYG	2 cut(s)	1725, 1757
AseI	ATTAAT	1 cut(s)	1239
Asp700I	GAANNNNTTC	3 cut(s)	785, 2387, 2406
AspLEI	GCGC	2 cut(s)	1804, 2278
AspS9I	GGNCC	9 cut(s)	596, 938, 1049, 1181, 1498, 1630, 1667, 2211, 2292
AsuC2I	CCSGG	3 cut(s)	826, 1730, 1731
AsuHPI	GGTGA	8 cut(s)	153, 485, 547, 696, 1463, 2122, 2383, 2411
AvaI	CYCGRG	3 cut(s)	254, 663, 1729
AvaII	GGWCC	7 cut(s)	596, 938, 1181, 1498, 1667, 2211, 2292
BaeGI	GKGCMC	2 cut(s)	826, 2342
BalI	TGGCCA	1 cut(s)	1226
BamHI	GGATCC	1 cut(s)	2038
BanI	GGYRCC	1 cut(s)	814
BanII	GRGCYC	3 cut(s)	664, 1408, 1760
BbrPI	CACGTG	1 cut(s)	821
BbsI	GAAGAC	1 cut(s)	2076
Bbv12I	GWGCWC	2 cut(s)	1408, 2093
BbvI	GCAGC	7 cut(s)	107, 736, 1046, 1598, 1603, 1931, 2265
BccI	CCATC	7 cut(s)	121, 172, 361, 713, 902, 1394, 2169
BceAI	ACGGC	1 cut(s)	1413
BciT130I	CCWGG	5 cut(s)	357, 1520, 1690, 2043, 2112
BciVI	GTATCC	2 cut(s)	493, 861
BclI	TGATCA	1 cut(s)	232
BcnI	CCSGG	3 cut(s)	826, 1730, 1731
BcoDI	GTCTC	3 cut(s)	251, 541, 584
BfaI	CTAG	5 cut(s)	804, 1311, 1578, 2268, 2351
BfmI	CTRYAG	4 cut(s)	242, 268, 855, 1089
BfoI	RGCGCY	1 cut(s)	2279
BfrI	CTTAAG	1 cut(s)	973
BfuAI	ACCTGC	1 cut(s)	1028
BfuI	GTATCC	2 cut(s)	493, 861
BisI	GCNGC	8 cut(s)	96, 750, 1035, 1587, 1617, 1851, 1920, 2279
BlsI	GCNGC	8 cut(s)	97, 751, 1036, 1588, 1618, 1852, 1921, 2280
Bme1390I	CCNGG	8 cut(s)	357, 826, 1520, 1690, 1730, 1731, 2043, 2112
Bme18I	GGWCC	7 cut(s)	596, 938, 1181, 1498, 1667, 2211, 2292
BmeT110I	CYCGRG	3 cut(s)	254, 663, 1729
BmgBI	CACGTC	1 cut(s)	1010
BmgT120I	GGNCC	9 cut(s)	596, 938, 1049, 1181, 1498, 1630, 1667, 2211, 2292
BmiI	GGNNCC	7 cut(s)	816, 1500, 1631, 1757, 2040, 2212, 2293
BmrFI	CCNGG	8 cut(s)	357, 826, 1520, 1690, 1730, 1731, 2043, 2112
BmsI	GCATC	7 cut(s)	703, 749, 1222, 1297, 1549, 1604, 1907
BpiI	GAAGAC	1 cut(s)	2076
BplI	GAGNNNNNCTC	2 cut(s)	2249, 2281
BpmI	CTGGAG	3 cut(s)	339, 783, 2025
BpuEI	CTTGAG	1 cut(s)	2328
BpuMI	CCSGG	3 cut(s)	826, 1730, 1731
BsaAI	YACGTR	1 cut(s)	821
BsaBI	GATNNNNATC	1 cut(s)	2106
BsaI	GGTCTC	1 cut(s)	541
BsaJI	CCNNGG	7 cut(s)	12, 151, 1082, 1227, 1518, 1728, 1729
BsaWI	WCCGGW	1 cut(s)	2132
Bsc4I	CCNNNNNNNGG	5 cut(s)	860, 1190, 1448, 1744, 2288
Bse1I	ACTGG	6 cut(s)	91, 265, 508, 598, 2419, 2459
Bse3DI	GCAATG	8 cut(s)	216, 294, 628, 894, 1458, 2040, 2093, 2385
Bse8I	GATNNNNATC	1 cut(s)	2106
BseBI	CCWGG	5 cut(s)	357, 1520, 1690, 2043, 2112
BseDI	CCNNGG	7 cut(s)	12, 151, 1082, 1227, 1518, 1728, 1729
BseGI	GGATG	6 cut(s)	922, 1237, 1312, 1370, 1564, 2161
BseJI	GATNNNNATC	1 cut(s)	2106
BseLI	CCNNNNNNNGG	5 cut(s)	860, 1190, 1448, 1744, 2288
BseMI	GCAATG	8 cut(s)	216, 294, 628, 894, 1458, 2040, 2093, 2385
BseMII	CTCAG	4 cut(s)	344, 536, 702, 1362
BseNI	ACTGG	6 cut(s)	91, 265, 508, 598, 2419, 2459
BseRI	GAGGAG	2 cut(s)	399, 402
BseSI	GKGCMC	2 cut(s)	826, 2342
BseXI	GCAGC	7 cut(s)	107, 736, 1046, 1598, 1603, 1931, 2265
BseYI	CCCAGC	3 cut(s)	607, 656, 1013
BsgI	GTGCAG	2 cut(s)	501, 1324
BshFI	GGCC	6 cut(s)	459, 1051, 1226, 1632, 2013, 2046
BshNI	GGYRCC	1 cut(s)	814
BsiHKAI	GWGCWC	2 cut(s)	1408, 2093
BsiHKCI	CYCGRG	3 cut(s)	254, 663, 1729
BsiSI	CCGG	7 cut(s)	826, 1107, 1715, 1730, 1788, 2133, 2255
BslFI	GGGAC	4 cut(s)	1381, 1484, 1746, 2305
BslI	CCNNNNNNNGG	5 cut(s)	860, 1190, 1448, 1744, 2288
BsmAI	GTCTC	3 cut(s)	251, 541, 584
BsmFI	GGGAC	4 cut(s)	1381, 1484, 1746, 2305
BsmI	GAATGC	2 cut(s)	43, 146
BsnI	GGCC	6 cut(s)	459, 1051, 1226, 1632, 2013, 2046
Bso31I	GGTCTC	1 cut(s)	541
BsoBI	CYCGRG	3 cut(s)	254, 663, 1729
Bsp1286I	GDGCHC	6 cut(s)	664, 826, 1408, 1760, 2093, 2342
Bsp143I	GATC	6 cut(s)	103, 232, 892, 1250, 1961, 2038
Bsp19I	CCATGG	2 cut(s)	12, 151
BspACI	CCGC	2 cut(s)	62, 1851
BspANI	GGCC	6 cut(s)	459, 1051, 1226, 1632, 2013, 2046
BspCNI	CTCAG	4 cut(s)	343, 537, 701, 1361
BspHI	TCATGA	2 cut(s)	229, 2235
BspLI	GGNNCC	7 cut(s)	816, 1500, 1631, 1757, 2040, 2212, 2293
BspMI	ACCTGC	1 cut(s)	1028
BspPI	GGATC	6 cut(s)	98, 900, 1258, 1969, 2033, 2046
BspQI	GCTCTTC	1 cut(s)	1606
BspT107I	GGYRCC	1 cut(s)	814
BspTI	CTTAAG	1 cut(s)	973
BspTNI	GGTCTC	1 cut(s)	541
BsrDI	GCAATG	8 cut(s)	216, 294, 628, 894, 1458, 2040, 2093, 2385
BsrI	ACTGG	6 cut(s)	91, 265, 508, 598, 2419, 2459
BssECI	CCNNGG	7 cut(s)	12, 151, 1082, 1227, 1518, 1728, 1729
BssMI	GATC	6 cut(s)	103, 232, 892, 1250, 1961, 2038
BssT1I	CCWWGG	4 cut(s)	12, 151, 1082, 1227
Bst2UI	CCWGG	5 cut(s)	357, 1520, 1690, 2043, 2112
Bst4CI	ACNGT	5 cut(s)	188, 859, 1796, 2128, 2361
Bst6I	CTCTTC	4 cut(s)	1275, 1606, 1663, 2221
BstAFI	CTTAAG	1 cut(s)	973
BstAPI	GCANNNNNTGC	3 cut(s)	746, 821, 1307
BstBAI	YACGTR	1 cut(s)	821
BstC8I	GCNNGC	6 cut(s)	275, 801, 1032, 1698, 2011, 2252
BstDEI	CTNAG	6 cut(s)	330, 524, 545, 688, 1348, 1771
BstDSI	CCRYGG	2 cut(s)	12, 151
BstENI	CCTNNNNNAGG	1 cut(s)	858
BstF5I	GGATG	6 cut(s)	922, 1237, 1312, 1370, 1564, 2161
BstH2I	RGCGCY	1 cut(s)	2279
BstHHI	GCGC	2 cut(s)	1804, 2278
BstKTI	GATC	6 cut(s)	106, 235, 895, 1253, 1964, 2041
BstMAI	GTCTC	3 cut(s)	251, 541, 584
BstMBI	GATC	6 cut(s)	103, 232, 892, 1250, 1961, 2038
BstNI	CCWGG	5 cut(s)	357, 1520, 1690, 2043, 2112
BstNSI	RCATGY	1 cut(s)	982
BstSCI	CCNGG	8 cut(s)	355, 824, 1518, 1688, 1728, 1729, 2041, 2110
BstSFI	CTRYAG	4 cut(s)	242, 268, 855, 1089
BstSLI	GKGCMC	2 cut(s)	826, 2342
BstV1I	GCAGC	7 cut(s)	107, 736, 1046, 1598, 1603, 1931, 2265
BstV2I	GAAGAC	1 cut(s)	2076
BstX2I	RGATCY	3 cut(s)	103, 1961, 2038
BstYI	RGATCY	3 cut(s)	103, 1961, 2038
BsuI	GTATCC	2 cut(s)	493, 861
BsuRI	GGCC	6 cut(s)	459, 1051, 1226, 1632, 2013, 2046
BtgI	CCRYGG	2 cut(s)	12, 151
BtrI	CACGTC	1 cut(s)	1010
BtsCI	GGATG	6 cut(s)	922, 1237, 1312, 1370, 1564, 2161
BtsIMutI	CAGTG	2 cut(s)	193, 2193
BveI	ACCTGC	1 cut(s)	1028
Cac8I	GCNNGC	6 cut(s)	275, 801, 1032, 1698, 2011, 2252
CaiI	CAGNNNCTG	2 cut(s)	749, 1469
CciI	TCATGA	2 cut(s)	229, 2235
CfoI	GCGC	2 cut(s)	1804, 2278
Cfr13I	GGNCC	9 cut(s)	596, 938, 1049, 1181, 1498, 1630, 1667, 2211, 2292
Cfr9I	CCCGGG	1 cut(s)	1729
Csp6I	GTAC	6 cut(s)	406, 1706, 1815, 1867, 2115, 2222
CspCI	CAANNNNNGTGG	4 cut(s)	1284, 1319, 1978, 2013
CviQI	GTAC	6 cut(s)	406, 1706, 1815, 1867, 2115, 2222
DdeI	CTNAG	6 cut(s)	330, 524, 545, 688, 1348, 1771
DpnI	GATC	6 cut(s)	105, 234, 894, 1252, 1963, 2040
DpnII	GATC	6 cut(s)	103, 232, 892, 1250, 1961, 2038
DraI	TTTAAA	2 cut(s)	289, 2424
DraIII	CACNNNGTG	1 cut(s)	821
DrdI	GACNNNNNNGTC	1 cut(s)	729
DseDI	GACNNNNNNGTC	1 cut(s)	729
EaeI	YGGCCR	1 cut(s)	1224
Eam1104I	CTCTTC	4 cut(s)	1275, 1606, 1663, 2221
EarI	CTCTTC	4 cut(s)	1275, 1606, 1663, 2221
Ecl136II	GAGCTC	1 cut(s)	1406
Eco130I	CCWWGG	4 cut(s)	12, 151, 1082, 1227
Eco147I	AGGCCT	1 cut(s)	2046
Eco24I	GRGCYC	3 cut(s)	664, 1408, 1760
Eco31I	GGTCTC	1 cut(s)	541
Eco47I	GGWCC	7 cut(s)	596, 938, 1181, 1498, 1667, 2211, 2292
Eco53kI	GAGCTC	1 cut(s)	1406
Eco57I	CTGAAG	4 cut(s)	453, 1977, 2043, 2169
Eco72I	CACGTG	1 cut(s)	821
Eco88I	CYCGRG	3 cut(s)	254, 663, 1729
EcoICRI	GAGCTC	1 cut(s)	1406
EcoNI	CCTNNNNNAGG	1 cut(s)	858
EcoRII	CCWGG	5 cut(s)	355, 1518, 1688, 2041, 2110
EcoT14I	CCWWGG	4 cut(s)	12, 151, 1082, 1227
EcoT38I	GRGCYC	3 cut(s)	664, 1408, 1760
ErhI	CCWWGG	4 cut(s)	12, 151, 1082, 1227
FalI	AAGNNNNNCTT	4 cut(s)	517, 549, 1603, 1635
FaqI	GGGAC	4 cut(s)	1381, 1484, 1746, 2305
FbaI	TGATCA	1 cut(s)	232
Fnu4HI	GCNGC	8 cut(s)	96, 750, 1035, 1587, 1617, 1851, 1920, 2279
FokI	GGATG	6 cut(s)	929, 1244, 1319, 1357, 1571, 2148
FriOI	GRGCYC	3 cut(s)	664, 1408, 1760
Fsp4HI	GCNGC	8 cut(s)	96, 750, 1035, 1587, 1617, 1851, 1920, 2279
FspBI	CTAG	5 cut(s)	804, 1311, 1578, 2268, 2351
GlaI	GCGC	2 cut(s)	1803, 2277
GluI	GCNGC	8 cut(s)	96, 750, 1035, 1587, 1617, 1851, 1920, 2279
GsaI	CCCAGC	3 cut(s)	611, 660, 1017
GsuI	CTGGAG	3 cut(s)	339, 783, 2025
HaeII	RGCGCY	1 cut(s)	2279
HaeIII	GGCC	6 cut(s)	459, 1051, 1226, 1632, 2013, 2046
HapII	CCGG	7 cut(s)	826, 1107, 1715, 1730, 1788, 2133, 2255
HhaI	GCGC	2 cut(s)	1804, 2278
Hin6I	GCGC	2 cut(s)	1802, 2276
HinP1I	GCGC	2 cut(s)	1802, 2276
HindIII	AAGCTT	1 cut(s)	275
HinfI	GANTC	6 cut(s)	137, 224, 1356, 1653, 1882, 2000
HpaII	CCGG	7 cut(s)	826, 1107, 1715, 1730, 1788, 2133, 2255
HphI	GGTGA	8 cut(s)	153, 485, 547, 696, 1463, 2122, 2383, 2411
Hpy166II	GTNNAC	4 cut(s)	408, 444, 2322, 2402
Hpy188I	TCNGA	9 cut(s)	198, 546, 938, 1172, 1351, 1412, 1966, 2175, 2215
Hpy8I	GTNNAC	4 cut(s)	408, 444, 2322, 2402
Hpy99I	CGWCG	1 cut(s)	1011
HpyCH4III	ACNGT	5 cut(s)	188, 859, 1796, 2128, 2361
HpyCH4IV	ACGT	4 cut(s)	404, 463, 820, 1009
HpyF3I	CTNAG	6 cut(s)	330, 524, 545, 688, 1348, 1771
HpySE526I	ACGT	4 cut(s)	404, 463, 820, 1009
HspAI	GCGC	2 cut(s)	1802, 2276
Ksp22I	TGATCA	1 cut(s)	232
Kzo9I	GATC	6 cut(s)	103, 232, 892, 1250, 1961, 2038
LguI	GCTCTTC	1 cut(s)	1606
LmnI	GCTCC	6 cut(s)	386, 1748, 1755, 2006, 2247, 2335
Lsp1109I	GCAGC	7 cut(s)	107, 736, 1046, 1598, 1603, 1931, 2265
LweI	GCATC	7 cut(s)	703, 749, 1222, 1297, 1549, 1604, 1907
MaeI	CTAG	5 cut(s)	804, 1311, 1578, 2268, 2351
MaeII	ACGT	4 cut(s)	404, 463, 820, 1009
MaeIII	GTNAC	8 cut(s)	964, 1200, 1451, 1507, 2128, 2188, 2261, 2368
MalI	GATC	6 cut(s)	105, 234, 894, 1252, 1963, 2040
MboI	GATC	6 cut(s)	103, 232, 892, 1250, 1961, 2038
MfeI	CAATTG	3 cut(s)	215, 1245, 1599
MflI	RGATCY	3 cut(s)	103, 1961, 2038
MhlI	GDGCHC	6 cut(s)	664, 826, 1408, 1760, 2093, 2342
MlsI	TGGCCA	1 cut(s)	1226
MluNI	TGGCCA	1 cut(s)	1226
MlyI	GAGTC	1 cut(s)	1994
MmeI	TCCRAC	2 cut(s)	916, 1150
Mox20I	TGGCCA	1 cut(s)	1226
MroXI	GAANNNNTTC	3 cut(s)	785, 2387, 2406
MscI	TGGCCA	1 cut(s)	1226
MseI	TTAA	9 cut(s)	182, 288, 510, 681, 974, 1239, 1380, 1860, 2423
Msp20I	TGGCCA	1 cut(s)	1226
MspCI	CTTAAG	1 cut(s)	973
MspI	CCGG	7 cut(s)	826, 1107, 1715, 1730, 1788, 2133, 2255
MspR9I	CCNGG	8 cut(s)	357, 826, 1520, 1690, 1730, 1731, 2043, 2112
MunI	CAATTG	3 cut(s)	215, 1245, 1599
Mva1269I	GAATGC	2 cut(s)	43, 146
MvaI	CCWGG	5 cut(s)	357, 1520, 1690, 2043, 2112
NciI	CCSGG	3 cut(s)	826, 1730, 1731
NcoI	CCATGG	2 cut(s)	12, 151
NdeII	GATC	6 cut(s)	103, 232, 892, 1250, 1961, 2038
NlaIV	GGNNCC	7 cut(s)	816, 1500, 1631, 1757, 2040, 2212, 2293
NmeAIII	GCCGAG	1 cut(s)	2252
NmuCI	GTSAC	5 cut(s)	964, 1451, 2128, 2188, 2368
NspI	RCATGY	1 cut(s)	982
PaeR7I	CTCGAG	2 cut(s)	254, 663
PagI	TCATGA	2 cut(s)	229, 2235
PceI	AGGCCT	1 cut(s)	2046
PciSI	GCTCTTC	1 cut(s)	1606
PctI	GAATGC	2 cut(s)	43, 146
PdmI	GAANNNNTTC	3 cut(s)	785, 2387, 2406
PfeI	GAWTC	5 cut(s)	137, 224, 1356, 1653, 1882
PflMI	CCANNNNNTGG	2 cut(s)	1448, 2288
PfoI	TCCNGGA	1 cut(s)	355
PkrI	GCNGC	8 cut(s)	97, 751, 1036, 1588, 1618, 1852, 1921, 2280
PleI	GAGTC	1 cut(s)	1994
PmaCI	CACGTG	1 cut(s)	821
PmlI	CACGTG	1 cut(s)	821
PpsI	GAGTC	1 cut(s)	1994
Ppu21I	YACGTR	1 cut(s)	821
PshBI	ATTAAT	1 cut(s)	1239
PsiI	TTATAA	1 cut(s)	537
Psp124BI	GAGCTC	1 cut(s)	1408
Psp6I	CCWGG	5 cut(s)	355, 1518, 1688, 2041, 2110
PspCI	CACGTG	1 cut(s)	821
PspFI	CCCAGC	3 cut(s)	607, 656, 1013
PspGI	CCWGG	5 cut(s)	355, 1518, 1688, 2041, 2110
PspN4I	GGNNCC	7 cut(s)	816, 1500, 1631, 1757, 2040, 2212, 2293
PspPI	GGNCC	9 cut(s)	596, 938, 1049, 1181, 1498, 1630, 1667, 2211, 2292
PspXI	VCTCGAGB	1 cut(s)	663
PstNI	CAGNNNCTG	2 cut(s)	749, 1469
PsuI	RGATCY	3 cut(s)	103, 1961, 2038
RsaI	GTAC	6 cut(s)	407, 1707, 1816, 1868, 2116, 2223
RsaNI	GTAC	6 cut(s)	406, 1706, 1815, 1867, 2115, 2222
SacI	GAGCTC	1 cut(s)	1408
SapI	GCTCTTC	1 cut(s)	1606
SaqAI	TTAA	9 cut(s)	182, 288, 510, 681, 974, 1239, 1380, 1860, 2423
SatI	GCNGC	8 cut(s)	96, 750, 1035, 1587, 1617, 1851, 1920, 2279
Sau3AI	GATC	6 cut(s)	103, 232, 892, 1250, 1961, 2038
Sau96I	GGNCC	9 cut(s)	596, 938, 1049, 1181, 1498, 1630, 1667, 2211, 2292
SchI	GAGTC	1 cut(s)	1994
ScrFI	CCNGG	8 cut(s)	357, 826, 1520, 1690, 1730, 1731, 2043, 2112
SduI	GDGCHC	6 cut(s)	664, 826, 1408, 1760, 2093, 2342
SfaNI	GCATC	7 cut(s)	703, 749, 1222, 1297, 1549, 1604, 1907
SfcI	CTRYAG	4 cut(s)	242, 268, 855, 1089
Sfr274I	CTCGAG	2 cut(s)	254, 663
SinI	GGWCC	7 cut(s)	596, 938, 1181, 1498, 1667, 2211, 2292
SlaI	CTCGAG	2 cut(s)	254, 663
SmaI	CCCGGG	1 cut(s)	1731
SmlI	CTYRAG	4 cut(s)	254, 663, 973, 2343
SmoI	CTYRAG	4 cut(s)	254, 663, 973, 2343
SseBI	AGGCCT	1 cut(s)	2046
SsiI	CCGC	2 cut(s)	62, 1851
SspI	AATATT	2 cut(s)	350, 565
SspMI	CTAG	5 cut(s)	804, 1311, 1578, 2268, 2351
SstI	GAGCTC	1 cut(s)	1408
StuI	AGGCCT	1 cut(s)	2046
StyD4I	CCNGG	8 cut(s)	355, 824, 1518, 1688, 1728, 1729, 2041, 2110
StyI	CCWWGG	4 cut(s)	12, 151, 1082, 1227
TaaI	ACNGT	5 cut(s)	188, 859, 1796, 2128, 2361
TaiI	ACGT	4 cut(s)	407, 466, 823, 1012
TaqI	TCGA	8 cut(s)	8, 255, 664, 693, 904, 1006, 1045, 2301
TaqII	GACCGA	1 cut(s)	1198
TatI	WGTACW	2 cut(s)	1705, 1866
TauI	GCSGC	1 cut(s)	1853
TfiI	GAWTC	5 cut(s)	137, 224, 1356, 1653, 1882
Tru1I	TTAA	9 cut(s)	182, 288, 510, 681, 974, 1239, 1380, 1860, 2423
Tru9I	TTAA	9 cut(s)	182, 288, 510, 681, 974, 1239, 1380, 1860, 2423
TscAI	CASTG	2 cut(s)	193, 2193
TseFI	GTSAC	5 cut(s)	964, 1451, 2128, 2188, 2368
TseI	GCWGC	7 cut(s)	95, 749, 1034, 1586, 1616, 1919, 2278
Tsp45I	GTSAC	5 cut(s)	964, 1451, 2128, 2188, 2368
TspMI	CCCGGG	1 cut(s)	1729
TspRI	CASTG	2 cut(s)	193, 2193
Van91I	CCANNNNNTGG	2 cut(s)	1448, 2288
Vha464I	CTTAAG	1 cut(s)	973
VpaK11BI	GGWCC	7 cut(s)	596, 938, 1181, 1498, 1667, 2211, 2292
VspI	ATTAAT	1 cut(s)	1239
XagI	CCTNNNNNAGG	1 cut(s)	858
XapI	RAATTY	2 cut(s)	1491, 1740
XceI	RCATGY	1 cut(s)	982
XcmI	CCANNNNNNNNNTGG	2 cut(s)	467, 2393
XhoI	CTCGAG	2 cut(s)	254, 663
XmaI	CCCGGG	1 cut(s)	1729
XmnI	GAANNNNTTC	3 cut(s)	785, 2387, 2406
XspI	CTAG	5 cut(s)	804, 1311, 1578, 2268, 2351

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.