RchiOBHm_Chr5g0002151

Belongs to the peptidase S8 family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
1226776 .. 1230163
3388 bp
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UTR
Exon/CDS
Intron
PRQ28353

Sequence Viewer

Length: 2394 bp
ATGTTTACTGCTTTTTCAGCAGAAGATCGAGCTATATACTTGGTTTTAATGGAAGGAGACTCACTTGCATTCAATGGAGGCTCTCCATCTTCACGCCTCAACCTAAACAGTGAAATTTCGAAGGCTCATGCAAAGCAATTGGAGGATTCTCATGATCAACTTCTACAGAGCAATCTTGAGACTGGAAGCTACAGCAAGCTTTACAGCTTTAAACACGTTGCAAACGGCTTTGCTGTCCATACAACCCCTTCACAGGCTGAAAAGCTGAAATATGCTCCAAGTGTAAAGCTGGTTGAGAGAGATAGAGGAGCGAAGTTGATGACAACGTACACTCCTCGCTTCCTTGAGTTACCTGAAGGAGTATGGACACAAGAAGGAGGCCAACGTAATGCTGGTGAAGGAATTGTGATTGGTTTTGTGGATTCTGGCATCAACCCTGTACATCTAAGTTTTGCTTATAATCCTCTGAGCCCTTTCACCTCTAATATTTCTCATTTTTCGGGTGCTTGTGAGACTGGTCCTCTCTTCCCAGCAACTTCATGCAATGGTAAAATAGTTTCAGCCAAGTTTTTCTCAGCTGGGGCTCTAGCCATTGCTACTCTCAACAGTTCAGTGGATTTTCTTTCACCTTTTGACTCAGATGGACATGGCAGTCATGTGGCATCGGTTGCTGCTGGAAATGCTGGAGTTCCTGTGGTTGTGAATGGCTTCTATTATGGACAAGCTAGTGGAATGGCACCACGTGCGCGGATTGCTATATATAAAGCTGTGTATCCTACAGTTGGAACTTTGGCAGATGTAGTTTCTGCAATTGATGAAGCAATTCGAGATGGAGTGGATGTCCTAGCACTCTCTGTCGGACCAGACGAACCGCCATTGGGTAGAGTGACCTTCTTAAGCATGTTTGATGTGTTCATGTTATATGCTCGACGAGCTGGGGTTTTTGTGGTGCAAGCAGCAGGTAATCGAGGGCCAGACCCTTCAAGTGTAGTGTCTTACAGCCCTTGGGCAGTAGGTGTAGCTTCTTCCGGCACAGATAGAATTTATCCTTCTTCTATTGTTCTTGGAAATGGAGCAAGAATTGAAGGTGTGGGATTATCAGGACCAACTTTTGGATATAGGTTACTTCAACATAGGTTGGTTTTGGCCAAGGATGCAATTAATCCAATTGGGTCATTCCCAAGAACCCCACCCTATGTTGAAGAGTGCCAATTTCCACAAGCATTGGATCCTAGGTTAGTTATAGGTAGTATTGTCATCTGCACATTCTCGGAGGGATTCTATAACAGGACATCCACCCTTAATGCCATCATCAACACGGCAAGAGCTCTTGGATTTATGGGTTTTGTTCTTGTTGCAAGTCCAGCCTATGGTGACTTCATTGCAGAGCCTGTTCCTTTTGCTGTTTCTGGCATTTTGGTCCCAAATTTAACCAATTCCCAGGTTATTTTACAATACTATGAACAACAAACATTCAAGGATGAGAGAGGATTTCCTACAAGACTTGCAGCGAGAGCATCAATCGGAGAAGGAAGAGCTGCTTCTTTCACGGGCCAAGCACCTATTGTTAGCAGATTCTCTTCGAGAGGACCAGATTTCATTGACAGGGACAGGAAGCCTGCTGATGTACTAAAGCCTGATATTCTTGCCCCGGGGCACCAAATCTGGGGAGCTTGGAGCCCCATTAGTGCCTTAGAACCCTCATTAGTGGGACAAAGTTTTGCACTACTTTCTGGTACAAGCATGGCAACACCTCATATAGCTGGAATAGCAGCACTTATTAAGCAGTACAATCCTTCATGGACTCCTTCCATGATTGCATCTGCGATTTCCACCACGGCAACCAAATATGATAAAAATGGAGAATTGATAATGGCTGAAGGATCTGATATAGGCAGTAAATATCCCTCCACTCCTTTTGATTTTGGAGCTGGCTTTGTCAGTCCAAGTCATGCCATGGATCCGGGTCTAGTCTTATCTTCAGGATATGAAGACTACATCAGCTTCTTGTGCTCATTGCATGATACCAATCCAAGTACAATAAGAACTGTCACTGGAGAGTTGTGCAACAAGCCACTTGACCATCCAGCCAATCTGAACCTTCCTTCAGTAACAATATCAGCATTGAATGGGTCTCAAATAGTAAGAAGGGTTTTCATGAACGTAGAGAGCAAGCCAGAGACTTACTCTAGCTCGGTGCTGCCTCCAAATGGGACAACAGTAGACATATCTCCTCCTTCGTTTACCATAGCTCCACAAGGTACTCAAGAGCTAGGTATACAGTTCAATGTGACCCAAGCAATGGATCAATTCACCTATGGTGAAATCGTTCTTACAGGAAGTTTAAATCATATTGTCAGGATACCTTTATCAGTTTTTCCAGTTTCAATATGA

Protein Analysis

797

Amino Acids

84.91

Weight (kDa)

5.72

Isoelectric Point (pI)

33.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Inhibitor_I9 PF05922 42 - 106 3.7e-12 Peptidase inhibitor I9
Peptidase_S8 PF00082 132 - 621 5.4e-41 Subtilase family
fn3_6 PF17766 698 - 792 2.3e-16 Fibronectin type-III domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 459
AasI GACNNNNNNGTC 1 cut(s) 651
Acc36I ACCTGC 1 cut(s) 950
AccB1I GGYRCC 2 cut(s) 736, 1656
AccB7I CCANNNNNTGG 3 cut(s) 1112, 1370, 2302
AccI GTMKAC 2 cut(s) 2223, 2278
AccII CGCG 1 cut(s) 748
AciI CCGC 2 cut(s) 748, 872
AclWI GGATC 6 cut(s) 1223, 1236, 1891, 1955, 1968, 2313
AcoI YGGCCR 1 cut(s) 1146
AcsI RAATTY 3 cut(s) 114, 1041, 1426
AcuI CTGAAG 4 cut(s) 375, 1899, 1965, 2091
AcvI CACGTG 1 cut(s) 743
AdeI CACNNNGTG 1 cut(s) 743
AfaI GTAC 7 cut(s) 329, 441, 1629, 1738, 1790, 2038, 2263
AfiI CCNNNNNNNGG 8 cut(s) 253, 782, 878, 1112, 1370, 1666, 2210, 2302
AflII CTTAAG 1 cut(s) 895
AflIII ACRYGT 1 cut(s) 214
AgsI TTSAA 9 cut(s) 73, 984, 1085, 1130, 1202, 1477, 2128, 2287, 2388
AjnI CCWGG 1 cut(s) 1440
Alw21I GWGCWC 2 cut(s) 1330, 2015
Alw26I GTCTC 5 cut(s) 51, 173, 506, 2139, 2174
AlwI GGATC 6 cut(s) 1223, 1236, 1891, 1955, 1968, 2313
AlwNI CAGNNNCTG 1 cut(s) 1391
Ama87I CYCGRG 1 cut(s) 1651
AoxI GGCC 4 cut(s) 379, 971, 1146, 1552
ApeKI GCWGC 6 cut(s) 671, 956, 1508, 1538, 1772, 2200
ApoI RAATTY 3 cut(s) 114, 1041, 1426
AseI ATTAAT 1 cut(s) 1161
Asp700I GAANNNNTTC 3 cut(s) 707, 822, 2328
AspA2I CCTAGG 1 cut(s) 1232
AspLEI GCGC 1 cut(s) 748
AspS9I GGNCC 7 cut(s) 518, 860, 971, 1103, 1420, 1552, 1589
AsuC2I CCSGG 3 cut(s) 1652, 1653, 1965
AsuHPI GGTGA 6 cut(s) 407, 469, 618, 1385, 2305, 2333
AsuII TTCGAA 1 cut(s) 119
AvaI CYCGRG 1 cut(s) 1651
AvaII GGWCC 5 cut(s) 518, 860, 1103, 1420, 1589
AvrII CCTAGG 1 cut(s) 1232
BaeGI GKGCMC 1 cut(s) 1659
BalI TGGCCA 1 cut(s) 1148
BamHI GGATCC 2 cut(s) 1228, 1960
BanI GGYRCC 2 cut(s) 736, 1656
BanII GRGCYC 4 cut(s) 473, 586, 1330, 1682
BbrPI CACGTG 1 cut(s) 743
BbsI GAAGAC 1 cut(s) 1998
Bbv12I GWGCWC 2 cut(s) 1330, 2015
BbvI GCAGC 6 cut(s) 658, 968, 1520, 1525, 1784, 2187
BccI CCATC 5 cut(s) 94, 635, 824, 1316, 2091
BceAI ACGGC 3 cut(s) 241, 1335, 1854
BciT130I CCWGG 1 cut(s) 1442
BciVI GTATCC 2 cut(s) 783, 2355
BclI TGATCA 1 cut(s) 154
BcnI CCSGG 3 cut(s) 1652, 1653, 1965
BcoDI GTCTC 5 cut(s) 51, 173, 506, 2139, 2174
BfaI CTAG 7 cut(s) 587, 726, 845, 1233, 1970, 2190, 2273
BfmI CTRYAG 3 cut(s) 164, 190, 777
BfrI CTTAAG 1 cut(s) 895
BfuAI ACCTGC 1 cut(s) 950
BfuI GTATCC 2 cut(s) 783, 2355
BisI GCNGC 6 cut(s) 672, 957, 1509, 1539, 1773, 2201
BlnI CCTAGG 1 cut(s) 1232
BlsI GCNGC 6 cut(s) 673, 958, 1510, 1540, 1774, 2202
Bme1390I CCNGG 4 cut(s) 1442, 1652, 1653, 1965
Bme18I GGWCC 5 cut(s) 518, 860, 1103, 1420, 1589
BmeT110I CYCGRG 1 cut(s) 1651
BmgT120I GGNCC 7 cut(s) 518, 860, 971, 1103, 1420, 1552, 1589
BmiI GGNNCC 6 cut(s) 738, 1230, 1422, 1658, 1679, 1962
BmrFI CCNGG 4 cut(s) 1442, 1652, 1653, 1965
BmsI GCATC 5 cut(s) 438, 671, 1144, 1526, 1829
BpiI GAAGAC 1 cut(s) 1998
BplI GAGNNNNNCTC 2 cut(s) 2171, 2203
BpmI CTGGAG 2 cut(s) 705, 2076
Bpu14I TTCGAA 1 cut(s) 119
BpuEI CTTGAG 3 cut(s) 197, 365, 2250
BpuMI CCSGG 3 cut(s) 1652, 1653, 1965
BsaAI YACGTR 1 cut(s) 743
BsaBI GATNNNNATC 1 cut(s) 2028
BsaI GGTCTC 1 cut(s) 2139
BsaJI CCNNGG 9 cut(s) 1004, 1149, 1232, 1440, 1650, 1651, 1652, 1836, 1956
BsaXI ACNNNNNCTCC 8 cut(s) 316, 346, 678, 708, 825, 855, 2236, 2266
Bsc4I CCNNNNNNNGG 8 cut(s) 253, 782, 878, 1112, 1370, 1666, 2210, 2302
Bse1I ACTGG 4 cut(s) 187, 520, 2059, 2381
Bse3DI GCAATG 5 cut(s) 550, 591, 1380, 2015, 2307
Bse8I GATNNNNATC 1 cut(s) 2028
BseBI CCWGG 1 cut(s) 1442
BseDI CCNNGG 9 cut(s) 1004, 1149, 1232, 1440, 1650, 1651, 1652, 1836, 1956
BseGI GGATG 5 cut(s) 844, 1159, 1292, 1486, 2083
BseJI GATNNNNATC 1 cut(s) 2028
BseLI CCNNNNNNNGG 8 cut(s) 253, 782, 878, 1112, 1370, 1666, 2210, 2302
BseMI GCAATG 5 cut(s) 550, 591, 1380, 2015, 2307
BseMII CTCAG 3 cut(s) 458, 588, 651
BseNI ACTGG 4 cut(s) 187, 520, 2059, 2381
BseRI GAGGAG 3 cut(s) 321, 324, 2223
BseSI GKGCMC 1 cut(s) 1659
BseXI GCAGC 6 cut(s) 658, 968, 1520, 1525, 1784, 2187
BseYI CCCAGC 3 cut(s) 529, 578, 935
BsgI GTGCAG 1 cut(s) 1246
Bsh1236I CGCG 1 cut(s) 748
BshFI GGCC 4 cut(s) 381, 973, 1148, 1554
BshNI GGYRCC 2 cut(s) 736, 1656
BsiHKAI GWGCWC 2 cut(s) 1330, 2015
BsiHKCI CYCGRG 1 cut(s) 1651
BsiSI CCGG 3 cut(s) 1029, 1652, 1964
BslFI GGGAC 4 cut(s) 1406, 1622, 1725, 2227
BslI CCNNNNNNNGG 8 cut(s) 253, 782, 878, 1112, 1370, 1666, 2210, 2302
BsmAI GTCTC 5 cut(s) 51, 173, 506, 2139, 2174
BsmFI GGGAC 4 cut(s) 1406, 1622, 1725, 2227
BsmI GAATGC 1 cut(s) 68
BsnI GGCC 4 cut(s) 381, 973, 1148, 1554
Bso31I GGTCTC 1 cut(s) 2139
BsoBI CYCGRG 1 cut(s) 1651
Bsp119I TTCGAA 1 cut(s) 119
Bsp1286I GDGCHC 6 cut(s) 473, 586, 1330, 1659, 1682, 2015
Bsp1407I TGTACA 1 cut(s) 439
Bsp143I GATC 6 cut(s) 25, 154, 1228, 1883, 1960, 2305
Bsp19I CCATGG 1 cut(s) 1956
BspACI CCGC 2 cut(s) 748, 872
BspANI GGCC 4 cut(s) 381, 973, 1148, 1554
BspCNI CTCAG 3 cut(s) 459, 587, 650
BspFNI CGCG 1 cut(s) 748
BspHI TCATGA 2 cut(s) 151, 2157
BspLI GGNNCC 6 cut(s) 738, 1230, 1422, 1658, 1679, 1962
BspMI ACCTGC 1 cut(s) 950
BspPI GGATC 6 cut(s) 1223, 1236, 1891, 1955, 1968, 2313
BspQI GCTCTTC 1 cut(s) 1528
BspT104I TTCGAA 1 cut(s) 119
BspT107I GGYRCC 2 cut(s) 736, 1656
BspTI CTTAAG 1 cut(s) 895
BspTNI GGTCTC 1 cut(s) 2139
BsrDI GCAATG 5 cut(s) 550, 591, 1380, 2015, 2307
BsrGI TGTACA 1 cut(s) 439
BsrI ACTGG 4 cut(s) 187, 520, 2059, 2381
BssECI CCNNGG 9 cut(s) 1004, 1149, 1232, 1440, 1650, 1651, 1652, 1836, 1956
BssMI GATC 6 cut(s) 25, 154, 1228, 1883, 1960, 2305
BssNAI GTATAC 1 cut(s) 2279
BssT1I CCWWGG 4 cut(s) 1004, 1149, 1232, 1956
Bst1107I GTATAC 1 cut(s) 2279
Bst2UI CCWGG 1 cut(s) 1442
Bst4CI ACNGT 6 cut(s) 110, 608, 781, 2050, 2221, 2283
Bst6I CTCTTC 4 cut(s) 530, 1197, 1528, 1585
BstAFI CTTAAG 1 cut(s) 895
BstAPI GCANNNNNTGC 2 cut(s) 668, 743
BstAUI TGTACA 1 cut(s) 439
BstBAI YACGTR 1 cut(s) 743
BstBI TTCGAA 1 cut(s) 119
BstC8I GCNNGC 5 cut(s) 197, 954, 1620, 1933, 2174
BstDEI CTNAG 5 cut(s) 446, 467, 574, 637, 1693
BstDSI CCRYGG 2 cut(s) 1836, 1956
BstF5I GGATG 5 cut(s) 844, 1159, 1292, 1486, 2083
BstFNI CGCG 1 cut(s) 748
BstHHI GCGC 1 cut(s) 748
BstKTI GATC 6 cut(s) 28, 157, 1231, 1886, 1963, 2308
BstMAI GTCTC 5 cut(s) 51, 173, 506, 2139, 2174
BstMBI GATC 6 cut(s) 25, 154, 1228, 1883, 1960, 2305
BstNI CCWGG 1 cut(s) 1442
BstNSI RCATGY 1 cut(s) 904
BstSCI CCNGG 4 cut(s) 1440, 1650, 1651, 1963
BstSFI CTRYAG 3 cut(s) 164, 190, 777
BstSLI GKGCMC 1 cut(s) 1659
BstUI CGCG 1 cut(s) 748
BstV1I GCAGC 6 cut(s) 658, 968, 1520, 1525, 1784, 2187
BstV2I GAAGAC 1 cut(s) 1998
BstX2I RGATCY 3 cut(s) 1228, 1883, 1960
BstYI RGATCY 3 cut(s) 1228, 1883, 1960
BstZ17I GTATAC 1 cut(s) 2279
BsuI GTATCC 2 cut(s) 783, 2355
BsuRI GGCC 4 cut(s) 381, 973, 1148, 1554
BtgI CCRYGG 2 cut(s) 1836, 1956
BtsCI GGATG 5 cut(s) 844, 1159, 1292, 1486, 2083
BtsIMutI CAGTG 3 cut(s) 115, 618, 2052
BveI ACCTGC 1 cut(s) 950
Cac8I GCNNGC 5 cut(s) 197, 954, 1620, 1933, 2174
CaiI CAGNNNCTG 1 cut(s) 1391
CciI TCATGA 2 cut(s) 151, 2157
CfoI GCGC 1 cut(s) 748
Cfr13I GGNCC 7 cut(s) 518, 860, 971, 1103, 1420, 1552, 1589
Cfr9I CCCGGG 1 cut(s) 1651
Csp6I GTAC 7 cut(s) 328, 440, 1628, 1737, 1789, 2037, 2262
CspCI CAANNNNNGTGG 4 cut(s) 1206, 1241, 1900, 1935
CviQI GTAC 7 cut(s) 328, 440, 1628, 1737, 1789, 2037, 2262
DdeI CTNAG 5 cut(s) 446, 467, 574, 637, 1693
DpnI GATC 6 cut(s) 27, 156, 1230, 1885, 1962, 2307
DpnII GATC 6 cut(s) 25, 154, 1228, 1883, 1960, 2305
DraI TTTAAA 2 cut(s) 211, 2346
DraIII CACNNNGTG 1 cut(s) 743
DrdI GACNNNNNNGTC 1 cut(s) 651
DseDI GACNNNNNNGTC 1 cut(s) 651
EaeI YGGCCR 1 cut(s) 1146
Eam1104I CTCTTC 4 cut(s) 530, 1197, 1528, 1585
EarI CTCTTC 4 cut(s) 530, 1197, 1528, 1585
Ecl136II GAGCTC 1 cut(s) 1328
Eco130I CCWWGG 4 cut(s) 1004, 1149, 1232, 1956
Eco24I GRGCYC 4 cut(s) 473, 586, 1330, 1682
Eco31I GGTCTC 1 cut(s) 2139
Eco47I GGWCC 5 cut(s) 518, 860, 1103, 1420, 1589
Eco53kI GAGCTC 1 cut(s) 1328
Eco57I CTGAAG 4 cut(s) 375, 1899, 1965, 2091
Eco72I CACGTG 1 cut(s) 743
Eco88I CYCGRG 1 cut(s) 1651
EcoICRI GAGCTC 1 cut(s) 1328
EcoRII CCWGG 1 cut(s) 1440
EcoT14I CCWWGG 4 cut(s) 1004, 1149, 1232, 1956
EcoT38I GRGCYC 4 cut(s) 473, 586, 1330, 1682
ErhI CCWWGG 4 cut(s) 1004, 1149, 1232, 1956
FalI AAGNNNNNCTT 4 cut(s) 439, 471, 1525, 1557
FaqI GGGAC 4 cut(s) 1406, 1622, 1725, 2227
FbaI TGATCA 1 cut(s) 154
FblI GTMKAC 2 cut(s) 2223, 2278
Fnu4HI GCNGC 6 cut(s) 672, 957, 1509, 1539, 1773, 2201
FokI GGATG 5 cut(s) 851, 1166, 1279, 1493, 2070
FriOI GRGCYC 4 cut(s) 473, 586, 1330, 1682
Fsp4HI GCNGC 6 cut(s) 672, 957, 1509, 1539, 1773, 2201
FspBI CTAG 7 cut(s) 587, 726, 845, 1233, 1970, 2190, 2273
GlaI GCGC 1 cut(s) 747
GluI GCNGC 6 cut(s) 672, 957, 1509, 1539, 1773, 2201
GsaI CCCAGC 3 cut(s) 533, 582, 939
GsuI CTGGAG 2 cut(s) 705, 2076
HaeIII GGCC 4 cut(s) 381, 973, 1148, 1554
HapII CCGG 3 cut(s) 1029, 1652, 1964
HhaI GCGC 1 cut(s) 748
Hin6I GCGC 1 cut(s) 746
HinP1I GCGC 1 cut(s) 746
HindIII AAGCTT 1 cut(s) 197
HinfI GANTC 7 cut(s) 59, 146, 422, 635, 1278, 1575, 1804
HpaII CCGG 3 cut(s) 1029, 1652, 1964
HphI GGTGA 6 cut(s) 407, 469, 618, 1385, 2305, 2333
Hpy166II GTNNAC 5 cut(s) 6, 330, 2224, 2244, 2279
Hpy188I TCNGA 7 cut(s) 468, 640, 860, 1273, 1526, 1888, 2097
Hpy188III TCNNGA 9 cut(s) 152, 176, 827, 1101, 1584, 1983, 2158, 2267, 2359
Hpy8I GTNNAC 5 cut(s) 6, 330, 2224, 2244, 2279
Hpy99I CGWCG 1 cut(s) 933
HpyCH4III ACNGT 6 cut(s) 110, 608, 781, 2050, 2221, 2283
HpyCH4IV ACGT 5 cut(s) 216, 326, 385, 742, 2163
HpyF3I CTNAG 5 cut(s) 446, 467, 574, 637, 1693
HpySE526I ACGT 5 cut(s) 216, 326, 385, 742, 2163
HspAI GCGC 1 cut(s) 746
Ksp22I TGATCA 1 cut(s) 154
Kzo9I GATC 6 cut(s) 25, 154, 1228, 1883, 1960, 2305
LguI GCTCTTC 1 cut(s) 1528
LmnI GCTCC 7 cut(s) 280, 308, 1073, 1670, 1677, 1928, 2257
Lsp1109I GCAGC 6 cut(s) 658, 968, 1520, 1525, 1784, 2187
LweI GCATC 5 cut(s) 438, 671, 1144, 1526, 1829
MaeI CTAG 7 cut(s) 587, 726, 845, 1233, 1970, 2190, 2273
MaeII ACGT 5 cut(s) 216, 326, 385, 742, 2163
MaeIII GTNAC 7 cut(s) 348, 886, 1122, 1373, 2050, 2110, 2290
MalI GATC 6 cut(s) 27, 156, 1230, 1885, 1962, 2307
MboI GATC 6 cut(s) 25, 154, 1228, 1883, 1960, 2305
MfeI CAATTG 3 cut(s) 137, 810, 1167
MflI RGATCY 3 cut(s) 1228, 1883, 1960
MhlI GDGCHC 6 cut(s) 473, 586, 1330, 1659, 1682, 2015
MlsI TGGCCA 1 cut(s) 1148
MluNI TGGCCA 1 cut(s) 1148
MlyI GAGTC 3 cut(s) 53, 629, 1798
MmeI TCCRAC 2 cut(s) 763, 838
Mox20I TGGCCA 1 cut(s) 1148
MroXI GAANNNNTTC 3 cut(s) 707, 822, 2328
MscI TGGCCA 1 cut(s) 1148
MseI TTAA 8 cut(s) 47, 210, 896, 1161, 1302, 1430, 1782, 2345
Msp20I TGGCCA 1 cut(s) 1148
MspA1I CMGCKG 1 cut(s) 578
MspCI CTTAAG 1 cut(s) 895
MspI CCGG 3 cut(s) 1029, 1652, 1964
MspR9I CCNGG 4 cut(s) 1442, 1652, 1653, 1965
MunI CAATTG 3 cut(s) 137, 810, 1167
Mva1269I GAATGC 1 cut(s) 68
MvaI CCWGG 1 cut(s) 1442
MvnI CGCG 1 cut(s) 748
NciI CCSGG 3 cut(s) 1652, 1653, 1965
NcoI CCATGG 1 cut(s) 1956
NdeII GATC 6 cut(s) 25, 154, 1228, 1883, 1960, 2305
NlaIV GGNNCC 6 cut(s) 738, 1230, 1422, 1658, 1679, 1962
NmuCI GTSAC 4 cut(s) 886, 1373, 2050, 2290
NspI RCATGY 1 cut(s) 904
NspV TTCGAA 1 cut(s) 119
PagI TCATGA 2 cut(s) 151, 2157
PciSI GCTCTTC 1 cut(s) 1528
PcsI WCGNNNNNNNCGW 1 cut(s) 864
PctI GAATGC 1 cut(s) 68
PdmI GAANNNNTTC 3 cut(s) 707, 822, 2328
PfeI GAWTC 4 cut(s) 146, 422, 1278, 1575
PflMI CCANNNNNTGG 3 cut(s) 1112, 1370, 2302
PkrI GCNGC 6 cut(s) 673, 958, 1510, 1540, 1774, 2202
PleI GAGTC 3 cut(s) 53, 629, 1798
PmaCI CACGTG 1 cut(s) 743
PmlI CACGTG 1 cut(s) 743
PpsI GAGTC 3 cut(s) 53, 629, 1798
Ppu21I YACGTR 1 cut(s) 743
PshBI ATTAAT 1 cut(s) 1161
PsiI TTATAA 1 cut(s) 459
Psp124BI GAGCTC 1 cut(s) 1330
Psp6I CCWGG 1 cut(s) 1440
PspCI CACGTG 1 cut(s) 743
PspFI CCCAGC 3 cut(s) 529, 578, 935
PspGI CCWGG 1 cut(s) 1440
PspN4I GGNNCC 6 cut(s) 738, 1230, 1422, 1658, 1679, 1962
PspPI GGNCC 7 cut(s) 518, 860, 971, 1103, 1420, 1552, 1589
PstNI CAGNNNCTG 1 cut(s) 1391
PsuI RGATCY 3 cut(s) 1228, 1883, 1960
PvuII CAGCTG 1 cut(s) 578
RsaI GTAC 7 cut(s) 329, 441, 1629, 1738, 1790, 2038, 2263
RsaNI GTAC 7 cut(s) 328, 440, 1628, 1737, 1789, 2037, 2262
SacI GAGCTC 1 cut(s) 1330
SapI GCTCTTC 1 cut(s) 1528
SaqAI TTAA 8 cut(s) 47, 210, 896, 1161, 1302, 1430, 1782, 2345
SatI GCNGC 6 cut(s) 672, 957, 1509, 1539, 1773, 2201
Sau3AI GATC 6 cut(s) 25, 154, 1228, 1883, 1960, 2305
Sau96I GGNCC 7 cut(s) 518, 860, 971, 1103, 1420, 1552, 1589
SchI GAGTC 3 cut(s) 53, 629, 1798
ScrFI CCNGG 4 cut(s) 1442, 1652, 1653, 1965
SduI GDGCHC 6 cut(s) 473, 586, 1330, 1659, 1682, 2015
SfaNI GCATC 5 cut(s) 438, 671, 1144, 1526, 1829
SfcI CTRYAG 3 cut(s) 164, 190, 777
SfuI TTCGAA 1 cut(s) 119
SinI GGWCC 5 cut(s) 518, 860, 1103, 1420, 1589
SmaI CCCGGG 1 cut(s) 1653
SmlI CTYRAG 4 cut(s) 176, 344, 895, 2265
SmoI CTYRAG 4 cut(s) 176, 344, 895, 2265
SsiI CCGC 2 cut(s) 748, 872
SspI AATATT 1 cut(s) 487
SspMI CTAG 7 cut(s) 587, 726, 845, 1233, 1970, 2190, 2273
SstI GAGCTC 1 cut(s) 1330
StyD4I CCNGG 4 cut(s) 1440, 1650, 1651, 1963
StyI CCWWGG 4 cut(s) 1004, 1149, 1232, 1956
TaaI ACNGT 6 cut(s) 110, 608, 781, 2050, 2221, 2283
TaiI ACGT 5 cut(s) 219, 329, 388, 745, 2166
TaqI TCGA 6 cut(s) 28, 119, 826, 928, 967, 1583
TatI WGTACW 4 cut(s) 439, 1627, 1788, 2036
TfiI GAWTC 4 cut(s) 146, 422, 1278, 1575
Tru1I TTAA 8 cut(s) 47, 210, 896, 1161, 1302, 1430, 1782, 2345
Tru9I TTAA 8 cut(s) 47, 210, 896, 1161, 1302, 1430, 1782, 2345
TscAI CASTG 3 cut(s) 115, 618, 2059
TseFI GTSAC 4 cut(s) 886, 1373, 2050, 2290
TseI GCWGC 6 cut(s) 671, 956, 1508, 1538, 1772, 2200
Tsp45I GTSAC 4 cut(s) 886, 1373, 2050, 2290
TspMI CCCGGG 1 cut(s) 1651
TspRI CASTG 3 cut(s) 115, 618, 2059
Van91I CCANNNNNTGG 3 cut(s) 1112, 1370, 2302
Vha464I CTTAAG 1 cut(s) 895
VpaK11BI GGWCC 5 cut(s) 518, 860, 1103, 1420, 1589
VspI ATTAAT 1 cut(s) 1161
XapI RAATTY 3 cut(s) 114, 1041, 1426
XceI RCATGY 1 cut(s) 904
XcmI CCANNNNNNNNNTGG 1 cut(s) 389
XmaI CCCGGG 1 cut(s) 1651
XmaJI CCTAGG 1 cut(s) 1232
XmiI GTMKAC 2 cut(s) 2223, 2278
XmnI GAANNNNTTC 3 cut(s) 707, 822, 2328
XspI CTAG 7 cut(s) 587, 726, 845, 1233, 1970, 2190, 2273
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.