Rmu_sc0007900.1_g000001

Belongs to the peptidase S8 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007900.1
Physical Location & Seq
Reverse (-)
2 .. 374
373 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007900.1_g000001.1.cds

Sequence Viewer

Length: 373 bp
atgacaacgtacactcctcgcttcctcgagttacctgaaggagtatggacacaagagggaggccaacgtaatgctggtgaaggaattgtgattggttttgtggatagtggcatcaatcctgcacatctaagttttgcttataatcctttgagccctttcacctccaatatttctcatttttcgggcgcttgtgagactgttcctctattcccagcaacttcatgcaatggtaaaattgtttcagctaagtttttctcagctggggctcgagccattgctactctcaacactttggtggattttctttcaccttcaacgcagatggacatggcaggtagcttgagtgactttaaaagtttaaatgcttttgata

Protein Analysis

124

Amino Acids

13.17

Weight (kDa)

4.92

Isoelectric Point (pI)

27.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 141
Acc36I ACCTGC 1 cut(s) 323
AcuI CTGAAG 1 cut(s) 57
AfaI GTAC 1 cut(s) 11
AgsI TTSAA 1 cut(s) 315
AleI CACNNNNGTG 1 cut(s) 293
AluBI AGCT 3 cut(s) 245, 260, 339
AluI AGCT 3 cut(s) 245, 260, 339
Alw26I GTCTC 1 cut(s) 188
Ama87I CYCGRG 2 cut(s) 26, 267
AoxI GGCC 1 cut(s) 61
AspLEI GCGC 1 cut(s) 188
AsuHPI GGTGA 3 cut(s) 89, 151, 300
AvaI CYCGRG 2 cut(s) 26, 267
BanII GRGCYC 2 cut(s) 155, 268
BccI CCATC 1 cut(s) 316
BcoDI GTCTC 1 cut(s) 188
BfoI RGCGCY 1 cut(s) 189
BfuAI ACCTGC 1 cut(s) 323
BmeT110I CYCGRG 2 cut(s) 26, 267
BmsI GCATC 1 cut(s) 120
BpuEI CTTGAG 1 cut(s) 361
BsaXI ACNNNNNCTCC 1 cut(s) 28
Bse3DI GCAATG 2 cut(s) 232, 273
BseMI GCAATG 2 cut(s) 232, 273
BseMII CTCAG 1 cut(s) 270
BseRI GAGGAG 1 cut(s) 6
BseYI CCCAGC 2 cut(s) 211, 260
BsgI GTGCAG 1 cut(s) 105
BshFI GGCC 1 cut(s) 63
BsiHKCI CYCGRG 2 cut(s) 26, 267
BsmAI GTCTC 1 cut(s) 188
BsnI GGCC 1 cut(s) 63
BsoBI CYCGRG 2 cut(s) 26, 267
Bsp1286I GDGCHC 2 cut(s) 155, 268
BspANI GGCC 1 cut(s) 63
BspCNI CTCAG 1 cut(s) 269
BspMI ACCTGC 1 cut(s) 323
BsrDI GCAATG 2 cut(s) 232, 273
Bst4CI ACNGT 1 cut(s) 199
BstDEI CTNAG 3 cut(s) 128, 246, 256
BstH2I RGCGCY 1 cut(s) 189
BstHHI GCGC 1 cut(s) 188
BstMAI GTCTC 1 cut(s) 188
BsuRI GGCC 1 cut(s) 63
BveI ACCTGC 1 cut(s) 323
CfoI GCGC 1 cut(s) 188
Csp6I GTAC 1 cut(s) 10
CviAII CATG 2 cut(s) 222, 328
CviJI RGCY 7 cut(s) 63, 153, 245, 260, 266, 272, 339
CviKI_1 RGCY 7 cut(s) 63, 153, 245, 260, 266, 272, 339
CviQI GTAC 1 cut(s) 10
DdeI CTNAG 3 cut(s) 128, 246, 256
DraI TTTAAA 2 cut(s) 352, 360
Eco24I GRGCYC 2 cut(s) 155, 268
Eco57I CTGAAG 1 cut(s) 57
Eco88I CYCGRG 2 cut(s) 26, 267
EcoT38I GRGCYC 2 cut(s) 155, 268
FaeI CATG 2 cut(s) 225, 331
FaiI YATR 4 cut(s) 46, 141, 223, 329
FalI AAGNNNNNCTT 2 cut(s) 121, 153
FatI CATG 2 cut(s) 221, 327
FriOI GRGCYC 2 cut(s) 155, 268
GlaI GCGC 1 cut(s) 187
GsaI CCCAGC 2 cut(s) 215, 264
HaeII RGCGCY 1 cut(s) 189
HaeIII GGCC 1 cut(s) 63
HhaI GCGC 1 cut(s) 188
Hin1II CATG 2 cut(s) 225, 331
Hin6I GCGC 1 cut(s) 186
HinP1I GCGC 1 cut(s) 186
HphI GGTGA 3 cut(s) 89, 151, 300
Hpy166II GTNNAC 1 cut(s) 12
Hpy8I GTNNAC 1 cut(s) 12
HpyAV CCTTC 3 cut(s) 32, 74, 321
HpyCH4III ACNGT 1 cut(s) 199
HpyCH4IV ACGT 2 cut(s) 8, 67
HpyCH4V TGCA 2 cut(s) 122, 225
HpyF3I CTNAG 3 cut(s) 128, 246, 256
HpySE526I ACGT 2 cut(s) 8, 67
Hsp92II CATG 2 cut(s) 225, 331
HspAI GCGC 1 cut(s) 186
LpnPI CCDG 6 cut(s) 48, 60, 132, 225, 246, 318
LweI GCATC 1 cut(s) 120
MaeII ACGT 2 cut(s) 8, 67
MaeIII GTNAC 2 cut(s) 30, 344
MhlI GDGCHC 2 cut(s) 155, 268
MluCI AATT 2 cut(s) 84, 234
MnlI CCTC 6 cut(s) 27, 35, 49, 53, 172, 213
MseI TTAA 2 cut(s) 351, 359
MslI CAYNNNNRTG 1 cut(s) 293
MspA1I CMGCKG 1 cut(s) 260
NlaIII CATG 2 cut(s) 225, 331
NmuCI GTSAC 1 cut(s) 344
OliI CACNNNNGTG 1 cut(s) 293
PaeR7I CTCGAG 2 cut(s) 26, 267
PsiI TTATAA 1 cut(s) 141
PspFI CCCAGC 2 cut(s) 211, 260
PspXI VCTCGAGB 2 cut(s) 26, 267
PvuII CAGCTG 1 cut(s) 260
RsaI GTAC 1 cut(s) 11
RsaNI GTAC 1 cut(s) 10
RseI CAYNNNNRTG 1 cut(s) 293
SaqAI TTAA 2 cut(s) 351, 359
SduI GDGCHC 2 cut(s) 155, 268
SetI ASST 9 cut(s) 11, 37, 70, 164, 247, 262, 313, 337, 341
SfaNI GCATC 1 cut(s) 120
Sfr274I CTCGAG 2 cut(s) 26, 267
SlaI CTCGAG 2 cut(s) 26, 267
SmiMI CAYNNNNRTG 1 cut(s) 293
SmlI CTYRAG 3 cut(s) 26, 267, 340
SmoI CTYRAG 3 cut(s) 26, 267, 340
Sse9I AATT 2 cut(s) 84, 234
SspI AATATT 1 cut(s) 169
TaaI ACNGT 1 cut(s) 199
TaiI ACGT 2 cut(s) 11, 70
TaqI TCGA 2 cut(s) 27, 268
TasI AATT 2 cut(s) 84, 234
Tru1I TTAA 2 cut(s) 351, 359
Tru9I TTAA 2 cut(s) 351, 359
TseFI GTSAC 1 cut(s) 344
Tsp45I GTSAC 1 cut(s) 344
TspDTI ATGAA 1 cut(s) 210
XcmI CCANNNNNNNNNTGG 1 cut(s) 71
XhoI CTCGAG 2 cut(s) 26, 267
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.