Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0006269

Physical Location & Seq

Genomic Coordinates Forward (+)

1188074 .. 1198339

Gene Structure 10266 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG017800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2109 bp

ATGGCAACTGCAAGAGCCAATATCTTATTGCCTTTGTTTTGTTTCATAGCGCTTCTCGCTTCTGTGATGTTTACTGCTTTTTCAGCAGAAGATCGAGCTATATACTTGGTTTTAATGGAAGGAGACTCACTTGCATTCAATGGAGGCTCTCCATCTTCACGCCTCAACCTAAACAGTGAAATTTCGAAGGCTCATGCAAAGCAATTGGAGGATTCTCATGATCAACTTCTACAGAGCAATCTTGAGACTGGAAGCTACAGCAAGCTTTACAGCTTTAAACACGTTGCAAACGGCTTTGCTGTCCATACAACCCCTTCACAGGCTGAAAAGCTGAAATATGCTCCGAGTGTAAAGCTGGTTGAGAGAGATAGAGGGGCGAAGTTGATGACAACGTACACTCCTCGCTTCCTTGAGTTACCTGAAGGAGTATGGACACAAGAAGGAGGCCAACGTAACGCTGGTGAAGGAATTGTGATTGGTTTTGTGGATTCTGGCATCAACCCTGTACATCTAAGTTTTGCTTATAATCCTCTGAGCCCTTTCACCTCTAATATTTCTCATTTTTCGGGTGCTTGTGAGACTGGTCCTCTATTCCCAGCAACTTCATGCAATGGTAAAATAGTTTCAGCCAAGTTTTTCTCAGCCGGGGCTCTAGCCATTGCTACTCTCAACAGTTCAGTGGATTTTCTTTCACCTTTTGACTCAGATGGACATGGCAGTCATGTGGCTTCGGTTGCTGCTGGAAATGCTGGAGTTCCTGTGGTTGTGAATGGCTTCTATTATGGACAAGCTAGTGGAATGGCACCACGTGCGCGGATTGCTGTATATAAAGCTGTGTATCCTACAGTAGGAACTTTGGCAGATGTAGTTTCTGCAATTGATGAAGCAATTCGAGATGGAGTGGACGTCCTAGCACTCTCTGTCGGACCAGACGAACCGCCATTGGGTAGAGTGACCTTCTTAAGCATGTTTGATGTGTTCATGTTATATGCTCGACGAGCTGGGGTTTTTGTGGTGCAAGCAGCAGGTAATCGAGGGCCAGACCCTTCAAGTGTAGTGTCTTACAGCCCTTGGGCAGTAGGTGTAGCTTCTTCCGGCACAGATAGAATTTATCCTTGTTCTATTGTTCTTGGAAATGGAGCAAGAATTGAAGGTGTGGGATTATCAGGACCAACTTTTGGATATAGGTTACTTCAACATAGGTTGGTTTTGGCCAAGGATGCAATTAATCCAATTGGGTCATTCCCAAGAACCCCACCCTATGTTGAAGAGTGCCAATTTCCACAAGCATTGGATCCTAGGTTAGTTATAGGTAGTATTGTCATCTGCACATTCTCGGAGGGATTCTATAACAGGACATCCACCCTTACTGCCATCATCAACACGGCAAGAGCTCTCGGATTTATGGGTTTTGTTCTTGTTGCAAATCCAGCCTATGGTGACTTCATTGCAGAGCCTGTTCCTTTTGCTGTTTCTGGCATTTTGGTCCCAAATGTAACCAATTCCCAGGTTATATTACAATACTATGAACAACAAACATTCAAGGATGAGAGAGGATTTCCTACAAGACTTGCAGCGAGAGCATCAATCGGAGAAGGAAGAGCTGCTTCTTTTACGGGCCAAGCACCTATTGTTAGCAGATTCTCTTCGAGAGGACCAGATTTCATTGACAGAGACAGGAAGCCTGCTGATGTACTAAAGCCTGATATTCTTGCCCCGGGGCACCAAATCTGGGGAGCTTGGAGCCCCATTAGTGCCTTAGAACCGTCATTAGTGGCGGATGTGAAAAAACCTCAGAACTCAGTTACAGCATCACTTGCAGATGATGTCAAGAGCAATCTTGATACCGGAAGCTACAGCAGCTTTAAACACATTGCAAACGGCTTTGCTGTCCATACAACTCCTTCTCAGGAGGAAAAGAAAAGCTTTTATGCATTTCTTAGTGATCATGATCGAATAACATTTCAGGTTGAAAAGCTCAAATATGCTCCAGGAGTAAAGCTGGTTGAGAGAGATAGAGGAGAAAAGTTGATGACAATAACGTACACTCCTCGCCTCCTTGAGTTACCTGAAGGAGTATGGACACAAGAAGGAGGAATATTAATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0006508 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0016787 GO:0017171 GO:0019538 GO:0032501 GO:0032502 GO:0042335 GO:0043170 GO:0044238 GO:0048856 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 Peptidase_S8

Protein Analysis

702

Amino Acids

75.43

Weight (kDa)

6.26

Isoelectric Point (pI)

30.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	64 - 128	3.1e-12	Peptidase inhibitor I9
Peptidase_S8	PF00082	154 - 585	3.7e-21	Subtilase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006269)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G62340
fragaria_vesca	FvH4_3g01420
malus_domestica	MD05G1352200.v1.1 MD10G1326200.v1.1
prunus_persica	Prupe.4G015500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0002151 RchiOBHm_Chr5g0002191
rosa_laevigata	RLG00000031001 RLG00000031002 RLG00000031007
rosa_multiflora	Rmu_co8154878.1_g000001 Rmu_sc0001492.1_g000001 Rmu_sc0007900.1_g000001 Rmu_sc0013155.1_g000003 Rmu_ssc0000001.1_g000005
rosa_roxburghii	Rroxscaffold_1G00073760
rosa_rugosa	Rorug04G0394700
rosa_samantha	Rh5AG016500 Rh5AG016600 Rh5AG017100 Rh5BG020000 Rh5CG017800 Rh5CG017900 Rh5CG018800 Rh5DG018000
rosa_wichuraiana	Rw2G029690 Rw5G001610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	525
AasI	GACNNNNNNGTC	1 cut(s)	717
AatII	GACGTC	1 cut(s)	909
Acc36I	ACCTGC	1 cut(s)	1016
AccB1I	GGYRCC	2 cut(s)	802, 1722
AccB7I	CCANNNNNTGG	2 cut(s)	1178, 1436
AccII	CGCG	1 cut(s)	814
AciI	CCGC	3 cut(s)	814, 938, 1778
AclWI	GGATC	2 cut(s)	1289, 1302
AcoI	YGGCCR	1 cut(s)	1212
AcsI	RAATTY	2 cut(s)	180, 1107
AcuI	CTGAAG	2 cut(s)	441, 2091
AcvI	CACGTG	1 cut(s)	809
AcyI	GRCGYC	1 cut(s)	906
AdeI	CACNNNGTG	1 cut(s)	809
AfaI	GTAC	4 cut(s)	395, 507, 1695, 2045
AfeI	AGCGCT	1 cut(s)	51
AfiI	CCNNNNNNNGG	6 cut(s)	319, 848, 944, 1178, 1436, 1732
AflII	CTTAAG	1 cut(s)	961
AflIII	ACRYGT	1 cut(s)	280
AgsI	TTSAA	7 cut(s)	139, 1050, 1151, 1196, 1268, 1543, 1973
AjnI	CCWGG	2 cut(s)	1506, 1990
Alw21I	GWGCWC	1 cut(s)	1396
Alw26I	GTCTC	4 cut(s)	117, 239, 572, 1668
AlwI	GGATC	2 cut(s)	1289, 1302
AlwNI	CAGNNNCTG	1 cut(s)	1457
Ama87I	CYCGRG	1 cut(s)	1717
Aor51HI	AGCGCT	1 cut(s)	51
AoxI	GGCC	4 cut(s)	445, 1037, 1212, 1618
ApeKI	GCWGC	5 cut(s)	737, 1022, 1574, 1604, 1860
ApoI	RAATTY	2 cut(s)	180, 1107
AseI	ATTAAT	2 cut(s)	1227, 2102
Asp700I	GAANNNNTTC	2 cut(s)	773, 888
AspA2I	CCTAGG	1 cut(s)	1298
AspLEI	GCGC	2 cut(s)	52, 814
AspS9I	GGNCC	7 cut(s)	584, 926, 1037, 1169, 1486, 1618, 1655
AsuC2I	CCSGG	3 cut(s)	646, 1718, 1719
AsuHPI	GGTGA	4 cut(s)	473, 535, 684, 1451
AsuII	TTCGAA	1 cut(s)	185
AvaI	CYCGRG	1 cut(s)	1717
AvaII	GGWCC	5 cut(s)	584, 926, 1169, 1486, 1655
AvrII	CCTAGG	1 cut(s)	1298
BaeGI	GKGCMC	1 cut(s)	1725
BalI	TGGCCA	1 cut(s)	1214
BamHI	GGATCC	1 cut(s)	1294
BanI	GGYRCC	2 cut(s)	802, 1722
BanII	GRGCYC	4 cut(s)	539, 652, 1396, 1748
BbrPI	CACGTG	1 cut(s)	809
Bbv12I	GWGCWC	1 cut(s)	1396
BbvI	GCAGC	5 cut(s)	724, 1034, 1586, 1591, 1872
BccI	CCATC	4 cut(s)	160, 701, 890, 1382
BceAI	ACGGC	3 cut(s)	307, 1401, 1897
BciT130I	CCWGG	2 cut(s)	1508, 1992
BciVI	GTATCC	1 cut(s)	849
BclI	TGATCA	2 cut(s)	220, 1945
BcnI	CCSGG	3 cut(s)	646, 1718, 1719
BcoDI	GTCTC	4 cut(s)	117, 239, 572, 1668
BfaI	CTAG	4 cut(s)	653, 792, 911, 1299
BfmI	CTRYAG	4 cut(s)	230, 256, 843, 1855
BfoI	RGCGCY	1 cut(s)	53
BfrI	CTTAAG	1 cut(s)	961
BfuAI	ACCTGC	1 cut(s)	1016
BfuI	GTATCC	1 cut(s)	849
BisI	GCNGC	5 cut(s)	738, 1023, 1575, 1605, 1861
BlnI	CCTAGG	1 cut(s)	1298
BlsI	GCNGC	5 cut(s)	739, 1024, 1576, 1606, 1862
Bme1390I	CCNGG	5 cut(s)	646, 1508, 1718, 1719, 1992
Bme18I	GGWCC	5 cut(s)	584, 926, 1169, 1486, 1655
BmeT110I	CYCGRG	1 cut(s)	1717
BmgT120I	GGNCC	7 cut(s)	584, 926, 1037, 1169, 1486, 1618, 1655
BmiI	GGNNCC	5 cut(s)	804, 1296, 1488, 1724, 1745
BmrFI	CCNGG	5 cut(s)	646, 1508, 1718, 1719, 1992
BmsI	GCATC	4 cut(s)	504, 1210, 1592, 1820
BpmI	CTGGAG	2 cut(s)	771, 1974
Bpu14I	TTCGAA	1 cut(s)	185
BpuEI	CTTGAG	3 cut(s)	263, 431, 2081
BpuMI	CCSGG	3 cut(s)	646, 1718, 1719
BsaAI	YACGTR	1 cut(s)	809
BsaBI	GATNNNNATC	1 cut(s)	1950
BsaHI	GRCGYC	1 cut(s)	906
BsaJI	CCNNGG	8 cut(s)	645, 1070, 1215, 1298, 1506, 1716, 1717, 1718
BsaWI	WCCGGW	1 cut(s)	1847
BsaXI	ACNNNNNCTCC	8 cut(s)	382, 412, 744, 774, 891, 921, 2032, 2062
Bsc4I	CCNNNNNNNGG	6 cut(s)	319, 848, 944, 1178, 1436, 1732
Bse1I	ACTGG	2 cut(s)	253, 586
Bse3DI	GCAATG	4 cut(s)	616, 657, 1446, 1872
Bse8I	GATNNNNATC	1 cut(s)	1950
BseBI	CCWGG	2 cut(s)	1508, 1992
BseDI	CCNNGG	8 cut(s)	645, 1070, 1215, 1298, 1506, 1716, 1717, 1718
BseGI	GGATG	4 cut(s)	1225, 1358, 1552, 1786
BseJI	GATNNNNATC	1 cut(s)	1950
BseLI	CCNNNNNNNGG	6 cut(s)	319, 848, 944, 1178, 1436, 1732
BseMI	GCAATG	4 cut(s)	616, 657, 1446, 1872
BseMII	CTCAG	6 cut(s)	524, 654, 717, 1808, 1815, 1922
BseNI	ACTGG	2 cut(s)	253, 586
BseRI	GAGGAG	3 cut(s)	390, 2034, 2040
BseSI	GKGCMC	1 cut(s)	1725
BseXI	GCAGC	5 cut(s)	724, 1034, 1586, 1591, 1872
BseYI	CCCAGC	2 cut(s)	595, 1001
BsgI	GTGCAG	1 cut(s)	1312
Bsh1236I	CGCG	1 cut(s)	814
BshFI	GGCC	4 cut(s)	447, 1039, 1214, 1620
BshNI	GGYRCC	2 cut(s)	802, 1722
BsiHKAI	GWGCWC	1 cut(s)	1396
BsiHKCI	CYCGRG	1 cut(s)	1717
BsiSI	CCGG	4 cut(s)	645, 1095, 1718, 1848
BslFI	GGGAC	1 cut(s)	1472
BslI	CCNNNNNNNGG	6 cut(s)	319, 848, 944, 1178, 1436, 1732
BsmAI	GTCTC	4 cut(s)	117, 239, 572, 1668
BsmFI	GGGAC	1 cut(s)	1472
BsmI	GAATGC	1 cut(s)	134
BsnI	GGCC	4 cut(s)	447, 1039, 1214, 1620
BsoBI	CYCGRG	1 cut(s)	1717
Bsp119I	TTCGAA	1 cut(s)	185
Bsp1286I	GDGCHC	5 cut(s)	539, 652, 1396, 1725, 1748
Bsp1407I	TGTACA	1 cut(s)	505
Bsp143I	GATC	5 cut(s)	91, 220, 1294, 1945, 1951
BspACI	CCGC	3 cut(s)	814, 938, 1778
BspANI	GGCC	4 cut(s)	447, 1039, 1214, 1620
BspCNI	CTCAG	6 cut(s)	525, 653, 716, 1807, 1814, 1921
BspFNI	CGCG	1 cut(s)	814
BspHI	TCATGA	2 cut(s)	217, 1948
BspLI	GGNNCC	5 cut(s)	804, 1296, 1488, 1724, 1745
BspMI	ACCTGC	1 cut(s)	1016
BspPI	GGATC	2 cut(s)	1289, 1302
BspQI	GCTCTTC	1 cut(s)	1594
BspT104I	TTCGAA	1 cut(s)	185
BspT107I	GGYRCC	2 cut(s)	802, 1722
BspTI	CTTAAG	1 cut(s)	961
BsrDI	GCAATG	4 cut(s)	616, 657, 1446, 1872
BsrGI	TGTACA	1 cut(s)	505
BsrI	ACTGG	2 cut(s)	253, 586
BssECI	CCNNGG	8 cut(s)	645, 1070, 1215, 1298, 1506, 1716, 1717, 1718
BssMI	GATC	5 cut(s)	91, 220, 1294, 1945, 1951
BssNI	GRCGYC	1 cut(s)	906
BssT1I	CCWWGG	3 cut(s)	1070, 1215, 1298
Bst2UI	CCWGG	2 cut(s)	1508, 1992
Bst4CI	ACNGT	4 cut(s)	176, 674, 847, 1767
Bst6I	CTCTTC	3 cut(s)	1263, 1594, 1651
BstACI	GRCGYC	1 cut(s)	906
BstAFI	CTTAAG	1 cut(s)	961
BstAPI	GCANNNNNTGC	2 cut(s)	809, 1817
BstAUI	TGTACA	1 cut(s)	505
BstBAI	YACGTR	1 cut(s)	809
BstBI	TTCGAA	1 cut(s)	185
BstC8I	GCNNGC	3 cut(s)	263, 1020, 1686
BstDEI	CTNAG	9 cut(s)	512, 533, 640, 703, 1759, 1794, 1801, 1908, 1940
BstENI	CCTNNNNNAGG	1 cut(s)	846
BstF5I	GGATG	4 cut(s)	1225, 1358, 1552, 1786
BstFNI	CGCG	1 cut(s)	814
BstH2I	RGCGCY	1 cut(s)	53
BstHHI	GCGC	2 cut(s)	52, 814
BstKTI	GATC	5 cut(s)	94, 223, 1297, 1948, 1954
BstMAI	GTCTC	4 cut(s)	117, 239, 572, 1668
BstMBI	GATC	5 cut(s)	91, 220, 1294, 1945, 1951
BstNI	CCWGG	2 cut(s)	1508, 1992
BstNSI	RCATGY	1 cut(s)	970
BstSCI	CCNGG	5 cut(s)	644, 1506, 1716, 1717, 1990
BstSFI	CTRYAG	4 cut(s)	230, 256, 843, 1855
BstSLI	GKGCMC	1 cut(s)	1725
BstUI	CGCG	1 cut(s)	814
BstV1I	GCAGC	5 cut(s)	724, 1034, 1586, 1591, 1872
BstX2I	RGATCY	1 cut(s)	1294
BstYI	RGATCY	1 cut(s)	1294
BsuI	GTATCC	1 cut(s)	849
BsuRI	GGCC	4 cut(s)	447, 1039, 1214, 1620
BtsCI	GGATG	4 cut(s)	1225, 1358, 1552, 1786
BtsIMutI	CAGTG	2 cut(s)	181, 684
BveI	ACCTGC	1 cut(s)	1016
Cac8I	GCNNGC	3 cut(s)	263, 1020, 1686
CaiI	CAGNNNCTG	1 cut(s)	1457
CciI	TCATGA	2 cut(s)	217, 1948
CfoI	GCGC	2 cut(s)	52, 814
Cfr13I	GGNCC	7 cut(s)	584, 926, 1037, 1169, 1486, 1618, 1655
Cfr9I	CCCGGG	1 cut(s)	1717
Csp6I	GTAC	4 cut(s)	394, 506, 1694, 2044
CspCI	CAANNNNNGTGG	2 cut(s)	1272, 1307
CviAII	CATG	8 cut(s)	194, 218, 606, 713, 722, 967, 982, 1949
CviQI	GTAC	4 cut(s)	394, 506, 1694, 2044
DdeI	CTNAG	9 cut(s)	512, 533, 640, 703, 1759, 1794, 1801, 1908, 1940
DpnI	GATC	5 cut(s)	93, 222, 1296, 1947, 1953
DpnII	GATC	5 cut(s)	91, 220, 1294, 1945, 1951
DraI	TTTAAA	2 cut(s)	277, 1867
DraIII	CACNNNGTG	1 cut(s)	809
DrdI	GACNNNNNNGTC	1 cut(s)	717
DseDI	GACNNNNNNGTC	1 cut(s)	717
EaeI	YGGCCR	1 cut(s)	1212
Eam1104I	CTCTTC	3 cut(s)	1263, 1594, 1651
EarI	CTCTTC	3 cut(s)	1263, 1594, 1651
EciI	GGCGGA	1 cut(s)	1793
Ecl136II	GAGCTC	1 cut(s)	1394
Eco130I	CCWWGG	3 cut(s)	1070, 1215, 1298
Eco24I	GRGCYC	4 cut(s)	539, 652, 1396, 1748
Eco47I	GGWCC	5 cut(s)	584, 926, 1169, 1486, 1655
Eco47III	AGCGCT	1 cut(s)	51
Eco53kI	GAGCTC	1 cut(s)	1394
Eco57I	CTGAAG	2 cut(s)	441, 2091
Eco72I	CACGTG	1 cut(s)	809
Eco88I	CYCGRG	1 cut(s)	1717
EcoICRI	GAGCTC	1 cut(s)	1394
EcoNI	CCTNNNNNAGG	1 cut(s)	846
EcoRII	CCWGG	2 cut(s)	1506, 1990
EcoT14I	CCWWGG	3 cut(s)	1070, 1215, 1298
EcoT22I	ATGCAT	1 cut(s)	1936
EcoT38I	GRGCYC	4 cut(s)	539, 652, 1396, 1748
ErhI	CCWWGG	3 cut(s)	1070, 1215, 1298
FaeI	CATG	8 cut(s)	197, 221, 609, 716, 725, 970, 985, 1952
FalI	AAGNNNNNCTT	6 cut(s)	505, 537, 1591, 1623, 1910, 1942
FaqI	GGGAC	1 cut(s)	1472
FatI	CATG	8 cut(s)	193, 217, 605, 712, 721, 966, 981, 1948
FbaI	TGATCA	2 cut(s)	220, 1945
Fnu4HI	GCNGC	5 cut(s)	738, 1023, 1575, 1605, 1861
FokI	GGATG	4 cut(s)	1232, 1345, 1559, 1793
FriOI	GRGCYC	4 cut(s)	539, 652, 1396, 1748
Fsp4HI	GCNGC	5 cut(s)	738, 1023, 1575, 1605, 1861
FspBI	CTAG	4 cut(s)	653, 792, 911, 1299
GlaI	GCGC	2 cut(s)	51, 813
GluI	GCNGC	5 cut(s)	738, 1023, 1575, 1605, 1861
GsaI	CCCAGC	2 cut(s)	599, 1005
GsuI	CTGGAG	2 cut(s)	771, 1974
HaeII	RGCGCY	1 cut(s)	53
HaeIII	GGCC	4 cut(s)	447, 1039, 1214, 1620
HapII	CCGG	4 cut(s)	645, 1095, 1718, 1848
HhaI	GCGC	2 cut(s)	52, 814
Hin1I	GRCGYC	1 cut(s)	906
Hin1II	CATG	8 cut(s)	197, 221, 609, 716, 725, 970, 985, 1952
Hin6I	GCGC	2 cut(s)	50, 812
HinP1I	GCGC	2 cut(s)	50, 812
HindIII	AAGCTT	2 cut(s)	263, 1924
HinfI	GANTC	6 cut(s)	125, 212, 488, 701, 1344, 1641
HpaII	CCGG	4 cut(s)	645, 1095, 1718, 1848
HphI	GGTGA	4 cut(s)	473, 535, 684, 1451
Hpy166II	GTNNAC	4 cut(s)	72, 396, 904, 2046
Hpy188I	TCNGA	8 cut(s)	345, 534, 706, 926, 1339, 1400, 1592, 1797
Hpy188III	TCNNGA	9 cut(s)	218, 242, 893, 1167, 1650, 1831, 1841, 1910, 1949
Hpy8I	GTNNAC	4 cut(s)	72, 396, 904, 2046
Hpy99I	CGWCG	1 cut(s)	999
HpyCH4III	ACNGT	4 cut(s)	176, 674, 847, 1767
HpyCH4IV	ACGT	6 cut(s)	282, 392, 451, 808, 906, 2042
HpyF3I	CTNAG	9 cut(s)	512, 533, 640, 703, 1759, 1794, 1801, 1908, 1940
HpySE526I	ACGT	6 cut(s)	282, 392, 451, 808, 906, 2042
Hsp92I	GRCGYC	1 cut(s)	906
Hsp92II	CATG	8 cut(s)	197, 221, 609, 716, 725, 970, 985, 1952
HspAI	GCGC	2 cut(s)	50, 812
Ksp22I	TGATCA	2 cut(s)	220, 1945
Kzo9I	GATC	5 cut(s)	91, 220, 1294, 1945, 1951
LguI	GCTCTTC	1 cut(s)	1594
LmnI	GCTCC	5 cut(s)	346, 1139, 1736, 1743, 1993
Lsp1109I	GCAGC	5 cut(s)	724, 1034, 1586, 1591, 1872
LweI	GCATC	4 cut(s)	504, 1210, 1592, 1820
MaeI	CTAG	4 cut(s)	653, 792, 911, 1299
MaeII	ACGT	6 cut(s)	282, 392, 451, 808, 906, 2042
MaeIII	GTNAC	8 cut(s)	414, 452, 952, 1188, 1439, 1495, 1804, 2064
MalI	GATC	5 cut(s)	93, 222, 1296, 1947, 1953
MboI	GATC	5 cut(s)	91, 220, 1294, 1945, 1951
MboII	GAAGA	6 cut(s)	101, 147, 1083, 1280, 1611, 1638
MfeI	CAATTG	3 cut(s)	203, 876, 1233
MflI	RGATCY	1 cut(s)	1294
MhlI	GDGCHC	5 cut(s)	539, 652, 1396, 1725, 1748
MlsI	TGGCCA	1 cut(s)	1214
MluNI	TGGCCA	1 cut(s)	1214
MlyI	GAGTC	2 cut(s)	119, 695
MmeI	TCCRAC	1 cut(s)	904
Mox20I	TGGCCA	1 cut(s)	1214
Mph1103I	ATGCAT	1 cut(s)	1936
MroXI	GAANNNNTTC	2 cut(s)	773, 888
MscI	TGGCCA	1 cut(s)	1214
MseI	TTAA	6 cut(s)	113, 276, 962, 1227, 1866, 2102
Msp20I	TGGCCA	1 cut(s)	1214
MspCI	CTTAAG	1 cut(s)	961
MspI	CCGG	4 cut(s)	645, 1095, 1718, 1848
MspR9I	CCNGG	5 cut(s)	646, 1508, 1718, 1719, 1992
MunI	CAATTG	3 cut(s)	203, 876, 1233
Mva1269I	GAATGC	1 cut(s)	134
MvaI	CCWGG	2 cut(s)	1508, 1992
MvnI	CGCG	1 cut(s)	814
NciI	CCSGG	3 cut(s)	646, 1718, 1719
NdeII	GATC	5 cut(s)	91, 220, 1294, 1945, 1951
NlaIII	CATG	8 cut(s)	197, 221, 609, 716, 725, 970, 985, 1952
NlaIV	GGNNCC	5 cut(s)	804, 1296, 1488, 1724, 1745
NmuCI	GTSAC	2 cut(s)	952, 1439
NsiI	ATGCAT	1 cut(s)	1936
NspI	RCATGY	1 cut(s)	970
NspV	TTCGAA	1 cut(s)	185
PagI	TCATGA	2 cut(s)	217, 1948
PciSI	GCTCTTC	1 cut(s)	1594
PcsI	WCGNNNNNNNCGW	1 cut(s)	930
PctI	GAATGC	1 cut(s)	134
PdmI	GAANNNNTTC	2 cut(s)	773, 888
PfeI	GAWTC	4 cut(s)	212, 488, 1344, 1641
PflMI	CCANNNNNTGG	2 cut(s)	1178, 1436
PfoI	TCCNGGA	1 cut(s)	1990
PkrI	GCNGC	5 cut(s)	739, 1024, 1576, 1606, 1862
PleI	GAGTC	2 cut(s)	119, 695
PmaCI	CACGTG	1 cut(s)	809
PmlI	CACGTG	1 cut(s)	809
PpsI	GAGTC	2 cut(s)	119, 695
Ppu21I	YACGTR	1 cut(s)	809
PshBI	ATTAAT	2 cut(s)	1227, 2102
PsiI	TTATAA	1 cut(s)	525
Psp124BI	GAGCTC	1 cut(s)	1396
Psp6I	CCWGG	2 cut(s)	1506, 1990
PspCI	CACGTG	1 cut(s)	809
PspFI	CCCAGC	2 cut(s)	595, 1001
PspGI	CCWGG	2 cut(s)	1506, 1990
PspN4I	GGNNCC	5 cut(s)	804, 1296, 1488, 1724, 1745
PspPI	GGNCC	7 cut(s)	584, 926, 1037, 1169, 1486, 1618, 1655
PstNI	CAGNNNCTG	1 cut(s)	1457
PsuI	RGATCY	1 cut(s)	1294
RsaI	GTAC	4 cut(s)	395, 507, 1695, 2045
RsaNI	GTAC	4 cut(s)	394, 506, 1694, 2044
SacI	GAGCTC	1 cut(s)	1396
SapI	GCTCTTC	1 cut(s)	1594
SaqAI	TTAA	6 cut(s)	113, 276, 962, 1227, 1866, 2102
SatI	GCNGC	5 cut(s)	738, 1023, 1575, 1605, 1861
Sau3AI	GATC	5 cut(s)	91, 220, 1294, 1945, 1951
Sau96I	GGNCC	7 cut(s)	584, 926, 1037, 1169, 1486, 1618, 1655
SchI	GAGTC	2 cut(s)	119, 695
ScrFI	CCNGG	5 cut(s)	646, 1508, 1718, 1719, 1992
SduI	GDGCHC	5 cut(s)	539, 652, 1396, 1725, 1748
SfaNI	GCATC	4 cut(s)	504, 1210, 1592, 1820
SfcI	CTRYAG	4 cut(s)	230, 256, 843, 1855
SfuI	TTCGAA	1 cut(s)	185
SinI	GGWCC	5 cut(s)	584, 926, 1169, 1486, 1655
SmaI	CCCGGG	1 cut(s)	1719
SmlI	CTYRAG	4 cut(s)	242, 410, 961, 2060
SmoI	CTYRAG	4 cut(s)	242, 410, 961, 2060
SsiI	CCGC	3 cut(s)	814, 938, 1778
SspI	AATATT	2 cut(s)	553, 2100
SspMI	CTAG	4 cut(s)	653, 792, 911, 1299
SstI	GAGCTC	1 cut(s)	1396
StyD4I	CCNGG	5 cut(s)	644, 1506, 1716, 1717, 1990
StyI	CCWWGG	3 cut(s)	1070, 1215, 1298
TaaI	ACNGT	4 cut(s)	176, 674, 847, 1767
TaiI	ACGT	6 cut(s)	285, 395, 454, 811, 909, 2045
TaqI	TCGA	7 cut(s)	94, 185, 892, 994, 1033, 1649, 1954
TatI	WGTACW	2 cut(s)	505, 1693
TfiI	GAWTC	4 cut(s)	212, 488, 1344, 1641
Tru1I	TTAA	6 cut(s)	113, 276, 962, 1227, 1866, 2102
Tru9I	TTAA	6 cut(s)	113, 276, 962, 1227, 1866, 2102
TscAI	CASTG	2 cut(s)	181, 684
TseFI	GTSAC	2 cut(s)	952, 1439
TseI	GCWGC	5 cut(s)	737, 1022, 1574, 1604, 1860
Tsp45I	GTSAC	2 cut(s)	952, 1439
TspDTI	ATGAA	7 cut(s)	34, 594, 897, 970, 1435, 1542, 1654
TspMI	CCCGGG	1 cut(s)	1717
TspRI	CASTG	2 cut(s)	181, 684
Van91I	CCANNNNNTGG	2 cut(s)	1178, 1436
Vha464I	CTTAAG	1 cut(s)	961
VpaK11BI	GGWCC	5 cut(s)	584, 926, 1169, 1486, 1655
VspI	ATTAAT	2 cut(s)	1227, 2102
XagI	CCTNNNNNAGG	1 cut(s)	846
XapI	RAATTY	2 cut(s)	180, 1107
XceI	RCATGY	1 cut(s)	970
XcmI	CCANNNNNNNNNTGG	1 cut(s)	455
XmaI	CCCGGG	1 cut(s)	1717
XmaJI	CCTAGG	1 cut(s)	1298
XmnI	GAANNNNTTC	2 cut(s)	773, 888
XspI	CTAG	4 cut(s)	653, 792, 911, 1299
ZraI	GACGTC	1 cut(s)	907
Zsp2I	ATGCAT	1 cut(s)	1936

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.