Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000001.1

Orthogroup ID

OG0006269

Physical Location & Seq

Genomic Coordinates Reverse (-)

12324 .. 15975

Gene Structure 3652 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000001.1_g000005.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2574 bp

atggcaactgcaagagccaatatcttattgcctttgttttgtttcatagcgcttctcgcttctgtgatgtttactgctttttcagcagaagatcgagctatatacttggttttaatggaaggagactcacttgcattcaatggaggctctccatcttcacgcctcaacctaaacagtgaaatttcgaaggctcatgcaaagcaattggaggattctcatgatcaacttctacagagcaatcttgagactggaagctacagcaagctttacagctttaaacacgttgcaaacggctttgctgtccatacaaccccttcacaggctgaaaagctgaaatatgctccaagtgtaaagctggttgagagagatagaggagcgaagttgatgacaacgtacactcctcgcttccttgagttacctgaaggagtatggacacaagaaggaggccaacgtaatgctggtgaaggaattgtgattggttttgtggattctggcatcaaccctgtacatctaagttttgcttataatcctctgagccctttcacctctaatatttctcatttttcgggtgcttgtgagactggtcctctcttcccagcaacttcatgcaatggtaaaatagtttcagccaagtttttctcagctggggctctagccattgctactctcaacagttcagtggattttctttcaccttttgactcagatggacatggcagtcatgtggcatcggttgctgctggaaatgctggagttcctgtggttgtgaatggcttctattatggacaagctagtggaatggcaccacgtgcgcggattgctgcttttttcagtcatgtggcatcggttgctgctggaaatgctggagttcctgtggttgtgaatggcttctattatggacaagctagtggaatggcaccacgtgcgcggattgcggtatataaagctgtgtatcctacagttggaactttggcagatgtagtttctgcaattgatgaagcaattcgagatggagtggatgtcctagcactctctgtcggaccagacgaaccgccattgggtagagtgaccttcttaagcatgtttgatgtgttcatgttatatgctcgacgagctggggtttttgtggtgcaagcagcaggtaatcgagggccagacccttcaagtgtagtgtcttacagcccttgggcagtgggtgtagcttcttccggcacagatagaatttatccttcttctattgttcttggaaatggagcaagaattgaaggtgtgggattatcaggaccaacttttggatataggttacttcaacataggttggttttggccaaggatgcaattaatccaattgggtcattcccaagaaccccaccctatgttgaagagtgccaatttccacaagcattggatcctaggttagttataggtagtattgtcatctgcacattctcggagggattctataacaggacatccacccttaatgccatcatcaacacggcaagagctctcggatttatgggttttgttcttgttgcaagtccagcctatggtgacttcattgcagagcctgttccttttgctgtttctggcattttggtcccaaatgtaaccaattcccaggttattttacaatactatgaacaacaaacattcaaggatgagagaggatttcctacaagacttgcagcgagagcatcaatcggagaaggaagagctgcttctttcacgggccaagcacctattgttagcagattctcttcgagaggaccagatttcattgacagagacaggaagcctgctgacgtactaaagcctgatattcttgccccggggcaccaaatctggggagcttggagccccattagtgccttagaaccctcattagtgggacaaagttttgcactactttctggtacaagcatggcaacacctcatatagctggaatagcagcacttattaagcagtacaatccttcatggactccttccatgattgcatctgcgatttccaccacggcaaccaaatatgataaaaatggagaactgataatggctgaaggatctgatataggcagtaaatatccctccactccttttgattttggagctggctttgtcagtccaagtcattccatggatccgggtctagtcttatcttcaggatatgaagactacatcagcttcttgtgctcattgcatgataccaatccaagtacaataagaactgtcactggagagttgtgcaacaagccacttgaccatccagccaatctgaaccttccttcagtaacaatatcagcattgaatgggtctcaaatagtacgaagggttttcatgaacgtcgagagcaagccagagacttactctagctcggtgctgcctcctaatgggacaacagtagacatatctcctccttcgtttaccatagctccacaaggtactcaagagctaggtatacagttcaatgtgacccaagcaatggatcaattcacctatggtgaaatcgttcttacaggaagtttaaatcatattgtcaggatacctttatcagtttttccagtttcaatatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0006508 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0016787 GO:0017171 GO:0019538 GO:0032501 GO:0032502 GO:0042335 GO:0043170 GO:0044238 GO:0048856 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 Peptidase_S8

Protein Analysis

857

Amino Acids

91.02

Weight (kDa)

6.0

Isoelectric Point (pI)

33.54

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006269)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G62340
fragaria_vesca	FvH4_3g01420
malus_domestica	MD05G1352200.v1.1 MD10G1326200.v1.1
prunus_persica	Prupe.4G015500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0002151 RchiOBHm_Chr5g0002191
rosa_laevigata	RLG00000031001 RLG00000031002 RLG00000031007
rosa_multiflora	Rmu_co8154878.1_g000001 Rmu_sc0001492.1_g000001 Rmu_sc0007900.1_g000001 Rmu_sc0013155.1_g000003 Rmu_ssc0000001.1_g000005
rosa_roxburghii	Rroxscaffold_1G00073760
rosa_rugosa	Rorug04G0394700
rosa_samantha	Rh5AG016500 Rh5AG016600 Rh5AG017100 Rh5BG020000 Rh5CG017800 Rh5CG017900 Rh5CG018800 Rh5DG018000
rosa_wichuraiana	Rw2G029690 Rw5G001610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	525
AasI	GACNNNNNNGTC	1 cut(s)	717
Acc36I	ACCTGC	1 cut(s)	1130
AccB1I	GGYRCC	3 cut(s)	802, 916, 1836
AccB7I	CCANNNNNTGG	3 cut(s)	1292, 1550, 2482
AccI	GTMKAC	2 cut(s)	2403, 2458
AccII	CGCG	2 cut(s)	814, 928
AciI	CCGC	4 cut(s)	814, 928, 935, 1052
AclWI	GGATC	6 cut(s)	1403, 1416, 2071, 2135, 2148, 2493
AcoI	YGGCCR	1 cut(s)	1326
AcsI	RAATTY	2 cut(s)	180, 1221
AcuI	CTGAAG	4 cut(s)	441, 2079, 2145, 2271
AcvI	CACGTG	2 cut(s)	809, 923
AdeI	CACNNNGTG	2 cut(s)	809, 923
AfaI	GTAC	8 cut(s)	395, 507, 1809, 1918, 1970, 2218, 2325, 2443
AfeI	AGCGCT	1 cut(s)	51
AfiI	CCNNNNNNNGG	8 cut(s)	319, 962, 1058, 1292, 1550, 1846, 2390, 2482
AflII	CTTAAG	1 cut(s)	1075
AflIII	ACRYGT	1 cut(s)	280
AgsI	TTSAA	9 cut(s)	139, 1164, 1265, 1310, 1382, 1657, 2308, 2467, 2568
AjnI	CCWGG	1 cut(s)	1620
Alw21I	GWGCWC	2 cut(s)	1510, 2195
Alw26I	GTCTC	6 cut(s)	117, 239, 572, 1782, 2319, 2354
AlwI	GGATC	6 cut(s)	1403, 1416, 2071, 2135, 2148, 2493
AlwNI	CAGNNNCTG	1 cut(s)	1571
Ama87I	CYCGRG	1 cut(s)	1831
Aor51HI	AGCGCT	1 cut(s)	51
AoxI	GGCC	4 cut(s)	445, 1151, 1326, 1732
ApeKI	GCWGC	8 cut(s)	737, 821, 851, 1136, 1688, 1718, 1952, 2380
ApoI	RAATTY	2 cut(s)	180, 1221
AseI	ATTAAT	1 cut(s)	1341
Asp700I	GAANNNNTTC	4 cut(s)	773, 887, 1002, 2508
AspA2I	CCTAGG	1 cut(s)	1412
AspLEI	GCGC	3 cut(s)	52, 814, 928
AspS9I	GGNCC	7 cut(s)	584, 1040, 1151, 1283, 1600, 1732, 1769
AsuC2I	CCSGG	3 cut(s)	1832, 1833, 2145
AsuHPI	GGTGA	6 cut(s)	473, 535, 684, 1565, 2485, 2513
AsuII	TTCGAA	1 cut(s)	185
AvaI	CYCGRG	1 cut(s)	1831
AvaII	GGWCC	5 cut(s)	584, 1040, 1283, 1600, 1769
AvrII	CCTAGG	1 cut(s)	1412
BaeGI	GKGCMC	1 cut(s)	1839
BalI	TGGCCA	1 cut(s)	1328
BamHI	GGATCC	2 cut(s)	1408, 2140
BanI	GGYRCC	3 cut(s)	802, 916, 1836
BanII	GRGCYC	4 cut(s)	539, 652, 1510, 1862
BbrPI	CACGTG	2 cut(s)	809, 923
BbsI	GAAGAC	1 cut(s)	2178
Bbv12I	GWGCWC	2 cut(s)	1510, 2195
BbvI	GCAGC	8 cut(s)	724, 808, 838, 1148, 1700, 1705, 1964, 2367
BccI	CCATC	5 cut(s)	160, 701, 1004, 1496, 2271
BceAI	ACGGC	3 cut(s)	307, 1515, 2034
BciT130I	CCWGG	1 cut(s)	1622
BciVI	GTATCC	2 cut(s)	963, 2535
BclI	TGATCA	1 cut(s)	220
BcnI	CCSGG	3 cut(s)	1832, 1833, 2145
BcoDI	GTCTC	6 cut(s)	117, 239, 572, 1782, 2319, 2354
BfaI	CTAG	8 cut(s)	653, 792, 906, 1025, 1413, 2150, 2370, 2453
BfmI	CTRYAG	3 cut(s)	230, 256, 957
BfoI	RGCGCY	1 cut(s)	53
BfrI	CTTAAG	1 cut(s)	1075
BfuAI	ACCTGC	1 cut(s)	1130
BfuI	GTATCC	2 cut(s)	963, 2535
BisI	GCNGC	8 cut(s)	738, 822, 852, 1137, 1689, 1719, 1953, 2381
BlnI	CCTAGG	1 cut(s)	1412
BlsI	GCNGC	8 cut(s)	739, 823, 853, 1138, 1690, 1720, 1954, 2382
Bme1390I	CCNGG	4 cut(s)	1622, 1832, 1833, 2145
Bme18I	GGWCC	5 cut(s)	584, 1040, 1283, 1600, 1769
BmeT110I	CYCGRG	1 cut(s)	1831
BmgT120I	GGNCC	7 cut(s)	584, 1040, 1151, 1283, 1600, 1732, 1769
BmiI	GGNNCC	7 cut(s)	804, 918, 1410, 1602, 1838, 1859, 2142
BmrFI	CCNGG	4 cut(s)	1622, 1832, 1833, 2145
BmsI	GCATC	6 cut(s)	504, 737, 851, 1324, 1706, 2009
BpiI	GAAGAC	1 cut(s)	2178
BplI	GAGNNNNNCTC	2 cut(s)	2351, 2383
BpmI	CTGGAG	3 cut(s)	771, 885, 2256
Bpu14I	TTCGAA	1 cut(s)	185
BpuEI	CTTGAG	3 cut(s)	263, 431, 2430
BpuMI	CCSGG	3 cut(s)	1832, 1833, 2145
BsaAI	YACGTR	2 cut(s)	809, 923
BsaBI	GATNNNNATC	1 cut(s)	2208
BsaI	GGTCTC	1 cut(s)	2319
BsaJI	CCNNGG	9 cut(s)	1184, 1329, 1412, 1620, 1830, 1831, 1832, 2016, 2136
Bsc4I	CCNNNNNNNGG	8 cut(s)	319, 962, 1058, 1292, 1550, 1846, 2390, 2482
Bse1I	ACTGG	4 cut(s)	253, 586, 2239, 2561
Bse3DI	GCAATG	5 cut(s)	616, 657, 1560, 2195, 2487
Bse8I	GATNNNNATC	1 cut(s)	2208
BseBI	CCWGG	1 cut(s)	1622
BseDI	CCNNGG	9 cut(s)	1184, 1329, 1412, 1620, 1830, 1831, 1832, 2016, 2136
BseGI	GGATG	5 cut(s)	1024, 1339, 1472, 1666, 2263
BseJI	GATNNNNATC	1 cut(s)	2208
BseLI	CCNNNNNNNGG	8 cut(s)	319, 962, 1058, 1292, 1550, 1846, 2390, 2482
BseMI	GCAATG	5 cut(s)	616, 657, 1560, 2195, 2487
BseMII	CTCAG	3 cut(s)	524, 654, 717
BseNI	ACTGG	4 cut(s)	253, 586, 2239, 2561
BseRI	GAGGAG	3 cut(s)	387, 390, 2403
BseSI	GKGCMC	1 cut(s)	1839
BseXI	GCAGC	8 cut(s)	724, 808, 838, 1148, 1700, 1705, 1964, 2367
BseYI	CCCAGC	3 cut(s)	595, 644, 1115
BsgI	GTGCAG	1 cut(s)	1426
Bsh1236I	CGCG	2 cut(s)	814, 928
BshFI	GGCC	4 cut(s)	447, 1153, 1328, 1734
BshNI	GGYRCC	3 cut(s)	802, 916, 1836
BsiHKAI	GWGCWC	2 cut(s)	1510, 2195
BsiHKCI	CYCGRG	1 cut(s)	1831
BsiSI	CCGG	3 cut(s)	1209, 1832, 2144
BslFI	GGGAC	3 cut(s)	1586, 1905, 2407
BslI	CCNNNNNNNGG	8 cut(s)	319, 962, 1058, 1292, 1550, 1846, 2390, 2482
BsmAI	GTCTC	6 cut(s)	117, 239, 572, 1782, 2319, 2354
BsmFI	GGGAC	3 cut(s)	1586, 1905, 2407
BsmI	GAATGC	1 cut(s)	134
BsnI	GGCC	4 cut(s)	447, 1153, 1328, 1734
Bso31I	GGTCTC	1 cut(s)	2319
BsoBI	CYCGRG	1 cut(s)	1831
Bsp119I	TTCGAA	1 cut(s)	185
Bsp1286I	GDGCHC	6 cut(s)	539, 652, 1510, 1839, 1862, 2195
Bsp1407I	TGTACA	1 cut(s)	505
Bsp143I	GATC	6 cut(s)	91, 220, 1408, 2063, 2140, 2485
Bsp19I	CCATGG	1 cut(s)	2136
BspACI	CCGC	4 cut(s)	814, 928, 935, 1052
BspANI	GGCC	4 cut(s)	447, 1153, 1328, 1734
BspCNI	CTCAG	3 cut(s)	525, 653, 716
BspFNI	CGCG	2 cut(s)	814, 928
BspHI	TCATGA	2 cut(s)	217, 2337
BspLI	GGNNCC	7 cut(s)	804, 918, 1410, 1602, 1838, 1859, 2142
BspMI	ACCTGC	1 cut(s)	1130
BspPI	GGATC	6 cut(s)	1403, 1416, 2071, 2135, 2148, 2493
BspQI	GCTCTTC	1 cut(s)	1708
BspT104I	TTCGAA	1 cut(s)	185
BspT107I	GGYRCC	3 cut(s)	802, 916, 1836
BspTI	CTTAAG	1 cut(s)	1075
BspTNI	GGTCTC	1 cut(s)	2319
BsrDI	GCAATG	5 cut(s)	616, 657, 1560, 2195, 2487
BsrGI	TGTACA	1 cut(s)	505
BsrI	ACTGG	4 cut(s)	253, 586, 2239, 2561
BssECI	CCNNGG	9 cut(s)	1184, 1329, 1412, 1620, 1830, 1831, 1832, 2016, 2136
BssMI	GATC	6 cut(s)	91, 220, 1408, 2063, 2140, 2485
BssNAI	GTATAC	1 cut(s)	2459
BssT1I	CCWWGG	4 cut(s)	1184, 1329, 1412, 2136
Bst1107I	GTATAC	1 cut(s)	2459
Bst2UI	CCWGG	1 cut(s)	1622
Bst4CI	ACNGT	6 cut(s)	176, 674, 961, 2230, 2401, 2463
Bst6I	CTCTTC	4 cut(s)	596, 1377, 1708, 1765
BstAFI	CTTAAG	1 cut(s)	1075
BstAPI	GCANNNNNTGC	4 cut(s)	734, 809, 848, 923
BstAUI	TGTACA	1 cut(s)	505
BstBAI	YACGTR	2 cut(s)	809, 923
BstBI	TTCGAA	1 cut(s)	185
BstC8I	GCNNGC	5 cut(s)	263, 1134, 1800, 2113, 2354
BstDEI	CTNAG	5 cut(s)	512, 533, 640, 703, 1873
BstDSI	CCRYGG	2 cut(s)	2016, 2136
BstF5I	GGATG	5 cut(s)	1024, 1339, 1472, 1666, 2263
BstFNI	CGCG	2 cut(s)	814, 928
BstH2I	RGCGCY	1 cut(s)	53
BstHHI	GCGC	3 cut(s)	52, 814, 928
BstKTI	GATC	6 cut(s)	94, 223, 1411, 2066, 2143, 2488
BstMAI	GTCTC	6 cut(s)	117, 239, 572, 1782, 2319, 2354
BstMBI	GATC	6 cut(s)	91, 220, 1408, 2063, 2140, 2485
BstNI	CCWGG	1 cut(s)	1622
BstNSI	RCATGY	1 cut(s)	1084
BstSCI	CCNGG	4 cut(s)	1620, 1830, 1831, 2143
BstSFI	CTRYAG	3 cut(s)	230, 256, 957
BstSLI	GKGCMC	1 cut(s)	1839
BstUI	CGCG	2 cut(s)	814, 928
BstV1I	GCAGC	8 cut(s)	724, 808, 838, 1148, 1700, 1705, 1964, 2367
BstV2I	GAAGAC	1 cut(s)	2178
BstX2I	RGATCY	3 cut(s)	1408, 2063, 2140
BstYI	RGATCY	3 cut(s)	1408, 2063, 2140
BstZ17I	GTATAC	1 cut(s)	2459
BsuI	GTATCC	2 cut(s)	963, 2535
BsuRI	GGCC	4 cut(s)	447, 1153, 1328, 1734
BtgI	CCRYGG	2 cut(s)	2016, 2136
BtsCI	GGATG	5 cut(s)	1024, 1339, 1472, 1666, 2263
BtsI	GCAGTG	1 cut(s)	1197
BtsIMutI	CAGTG	4 cut(s)	181, 684, 1197, 2232
BveI	ACCTGC	1 cut(s)	1130
Cac8I	GCNNGC	5 cut(s)	263, 1134, 1800, 2113, 2354
CaiI	CAGNNNCTG	1 cut(s)	1571
CciI	TCATGA	2 cut(s)	217, 2337
CfoI	GCGC	3 cut(s)	52, 814, 928
Cfr13I	GGNCC	7 cut(s)	584, 1040, 1151, 1283, 1600, 1732, 1769
Cfr9I	CCCGGG	1 cut(s)	1831
Csp6I	GTAC	8 cut(s)	394, 506, 1808, 1917, 1969, 2217, 2324, 2442
CspCI	CAANNNNNGTGG	4 cut(s)	1386, 1421, 2080, 2115
CviQI	GTAC	8 cut(s)	394, 506, 1808, 1917, 1969, 2217, 2324, 2442
DdeI	CTNAG	5 cut(s)	512, 533, 640, 703, 1873
DpnI	GATC	6 cut(s)	93, 222, 1410, 2065, 2142, 2487
DpnII	GATC	6 cut(s)	91, 220, 1408, 2063, 2140, 2485
DraI	TTTAAA	2 cut(s)	277, 2526
DraIII	CACNNNGTG	2 cut(s)	809, 923
DrdI	GACNNNNNNGTC	1 cut(s)	717
DseDI	GACNNNNNNGTC	1 cut(s)	717
EaeI	YGGCCR	1 cut(s)	1326
Eam1104I	CTCTTC	4 cut(s)	596, 1377, 1708, 1765
EarI	CTCTTC	4 cut(s)	596, 1377, 1708, 1765
Ecl136II	GAGCTC	1 cut(s)	1508
Eco130I	CCWWGG	4 cut(s)	1184, 1329, 1412, 2136
Eco24I	GRGCYC	4 cut(s)	539, 652, 1510, 1862
Eco31I	GGTCTC	1 cut(s)	2319
Eco47I	GGWCC	5 cut(s)	584, 1040, 1283, 1600, 1769
Eco47III	AGCGCT	1 cut(s)	51
Eco53kI	GAGCTC	1 cut(s)	1508
Eco57I	CTGAAG	4 cut(s)	441, 2079, 2145, 2271
Eco72I	CACGTG	2 cut(s)	809, 923
Eco88I	CYCGRG	1 cut(s)	1831
EcoICRI	GAGCTC	1 cut(s)	1508
EcoRII	CCWGG	1 cut(s)	1620
EcoT14I	CCWWGG	4 cut(s)	1184, 1329, 1412, 2136
EcoT38I	GRGCYC	4 cut(s)	539, 652, 1510, 1862
ErhI	CCWWGG	4 cut(s)	1184, 1329, 1412, 2136
FalI	AAGNNNNNCTT	4 cut(s)	505, 537, 1705, 1737
FaqI	GGGAC	3 cut(s)	1586, 1905, 2407
FbaI	TGATCA	1 cut(s)	220
FblI	GTMKAC	2 cut(s)	2403, 2458
Fnu4HI	GCNGC	8 cut(s)	738, 822, 852, 1137, 1689, 1719, 1953, 2381
FokI	GGATG	5 cut(s)	1031, 1346, 1459, 1673, 2250
FriOI	GRGCYC	4 cut(s)	539, 652, 1510, 1862
Fsp4HI	GCNGC	8 cut(s)	738, 822, 852, 1137, 1689, 1719, 1953, 2381
FspBI	CTAG	8 cut(s)	653, 792, 906, 1025, 1413, 2150, 2370, 2453
GlaI	GCGC	3 cut(s)	51, 813, 927
GluI	GCNGC	8 cut(s)	738, 822, 852, 1137, 1689, 1719, 1953, 2381
GsaI	CCCAGC	3 cut(s)	599, 648, 1119
GsuI	CTGGAG	3 cut(s)	771, 885, 2256
HaeII	RGCGCY	1 cut(s)	53
HaeIII	GGCC	4 cut(s)	447, 1153, 1328, 1734
HapII	CCGG	3 cut(s)	1209, 1832, 2144
HhaI	GCGC	3 cut(s)	52, 814, 928
Hin6I	GCGC	3 cut(s)	50, 812, 926
HinP1I	GCGC	3 cut(s)	50, 812, 926
HindIII	AAGCTT	1 cut(s)	263
HinfI	GANTC	7 cut(s)	125, 212, 488, 701, 1458, 1755, 1984
HpaII	CCGG	3 cut(s)	1209, 1832, 2144
HphI	GGTGA	6 cut(s)	473, 535, 684, 1565, 2485, 2513
Hpy166II	GTNNAC	5 cut(s)	72, 396, 2404, 2424, 2459
Hpy188I	TCNGA	8 cut(s)	534, 706, 1040, 1453, 1514, 1706, 2068, 2277
Hpy8I	GTNNAC	5 cut(s)	72, 396, 2404, 2424, 2459
Hpy99I	CGWCG	2 cut(s)	1113, 2348
HpyCH4III	ACNGT	6 cut(s)	176, 674, 961, 2230, 2401, 2463
HpyCH4IV	ACGT	7 cut(s)	282, 392, 451, 808, 922, 1806, 2343
HpyF3I	CTNAG	5 cut(s)	512, 533, 640, 703, 1873
HpySE526I	ACGT	7 cut(s)	282, 392, 451, 808, 922, 1806, 2343
HspAI	GCGC	3 cut(s)	50, 812, 926
Ksp22I	TGATCA	1 cut(s)	220
Kzo9I	GATC	6 cut(s)	91, 220, 1408, 2063, 2140, 2485
LguI	GCTCTTC	1 cut(s)	1708
LmnI	GCTCC	7 cut(s)	346, 374, 1253, 1850, 1857, 2108, 2437
Lsp1109I	GCAGC	8 cut(s)	724, 808, 838, 1148, 1700, 1705, 1964, 2367
LweI	GCATC	6 cut(s)	504, 737, 851, 1324, 1706, 2009
MaeI	CTAG	8 cut(s)	653, 792, 906, 1025, 1413, 2150, 2370, 2453
MaeII	ACGT	7 cut(s)	282, 392, 451, 808, 922, 1806, 2343
MaeIII	GTNAC	8 cut(s)	414, 1066, 1302, 1553, 1609, 2230, 2290, 2470
MalI	GATC	6 cut(s)	93, 222, 1410, 2065, 2142, 2487
MboI	GATC	6 cut(s)	91, 220, 1408, 2063, 2140, 2485
MfeI	CAATTG	3 cut(s)	203, 990, 1347
MflI	RGATCY	3 cut(s)	1408, 2063, 2140
MhlI	GDGCHC	6 cut(s)	539, 652, 1510, 1839, 1862, 2195
MlsI	TGGCCA	1 cut(s)	1328
MluNI	TGGCCA	1 cut(s)	1328
MlyI	GAGTC	3 cut(s)	119, 695, 1978
MmeI	TCCRAC	2 cut(s)	943, 1018
Mox20I	TGGCCA	1 cut(s)	1328
MroXI	GAANNNNTTC	4 cut(s)	773, 887, 1002, 2508
MscI	TGGCCA	1 cut(s)	1328
MseI	TTAA	7 cut(s)	113, 276, 1076, 1341, 1482, 1962, 2525
Msp20I	TGGCCA	1 cut(s)	1328
MspA1I	CMGCKG	1 cut(s)	644
MspCI	CTTAAG	1 cut(s)	1075
MspI	CCGG	3 cut(s)	1209, 1832, 2144
MspR9I	CCNGG	4 cut(s)	1622, 1832, 1833, 2145
MunI	CAATTG	3 cut(s)	203, 990, 1347
Mva1269I	GAATGC	1 cut(s)	134
MvaI	CCWGG	1 cut(s)	1622
MvnI	CGCG	2 cut(s)	814, 928
NciI	CCSGG	3 cut(s)	1832, 1833, 2145
NcoI	CCATGG	1 cut(s)	2136
NdeII	GATC	6 cut(s)	91, 220, 1408, 2063, 2140, 2485
NlaIV	GGNNCC	7 cut(s)	804, 918, 1410, 1602, 1838, 1859, 2142
NmuCI	GTSAC	4 cut(s)	1066, 1553, 2230, 2470
NspI	RCATGY	1 cut(s)	1084
NspV	TTCGAA	1 cut(s)	185
PagI	TCATGA	2 cut(s)	217, 2337
PciSI	GCTCTTC	1 cut(s)	1708
PcsI	WCGNNNNNNNCGW	1 cut(s)	1044
PctI	GAATGC	1 cut(s)	134
PdmI	GAANNNNTTC	4 cut(s)	773, 887, 1002, 2508
PfeI	GAWTC	4 cut(s)	212, 488, 1458, 1755
PflMI	CCANNNNNTGG	3 cut(s)	1292, 1550, 2482
PkrI	GCNGC	8 cut(s)	739, 823, 853, 1138, 1690, 1720, 1954, 2382
PleI	GAGTC	3 cut(s)	119, 695, 1978
PmaCI	CACGTG	2 cut(s)	809, 923
PmlI	CACGTG	2 cut(s)	809, 923
PpsI	GAGTC	3 cut(s)	119, 695, 1978
Ppu21I	YACGTR	2 cut(s)	809, 923
PshBI	ATTAAT	1 cut(s)	1341
PsiI	TTATAA	1 cut(s)	525
Psp124BI	GAGCTC	1 cut(s)	1510
Psp6I	CCWGG	1 cut(s)	1620
PspCI	CACGTG	2 cut(s)	809, 923
PspFI	CCCAGC	3 cut(s)	595, 644, 1115
PspGI	CCWGG	1 cut(s)	1620
PspN4I	GGNNCC	7 cut(s)	804, 918, 1410, 1602, 1838, 1859, 2142
PspPI	GGNCC	7 cut(s)	584, 1040, 1151, 1283, 1600, 1732, 1769
PstNI	CAGNNNCTG	1 cut(s)	1571
PsuI	RGATCY	3 cut(s)	1408, 2063, 2140
PvuII	CAGCTG	1 cut(s)	644
RsaI	GTAC	8 cut(s)	395, 507, 1809, 1918, 1970, 2218, 2325, 2443
RsaNI	GTAC	8 cut(s)	394, 506, 1808, 1917, 1969, 2217, 2324, 2442
SacI	GAGCTC	1 cut(s)	1510
SapI	GCTCTTC	1 cut(s)	1708
SaqAI	TTAA	7 cut(s)	113, 276, 1076, 1341, 1482, 1962, 2525
SatI	GCNGC	8 cut(s)	738, 822, 852, 1137, 1689, 1719, 1953, 2381
Sau3AI	GATC	6 cut(s)	91, 220, 1408, 2063, 2140, 2485
Sau96I	GGNCC	7 cut(s)	584, 1040, 1151, 1283, 1600, 1732, 1769
SchI	GAGTC	3 cut(s)	119, 695, 1978
ScrFI	CCNGG	4 cut(s)	1622, 1832, 1833, 2145
SduI	GDGCHC	6 cut(s)	539, 652, 1510, 1839, 1862, 2195
SfaNI	GCATC	6 cut(s)	504, 737, 851, 1324, 1706, 2009
SfcI	CTRYAG	3 cut(s)	230, 256, 957
SfuI	TTCGAA	1 cut(s)	185
SinI	GGWCC	5 cut(s)	584, 1040, 1283, 1600, 1769
SmaI	CCCGGG	1 cut(s)	1833
SmlI	CTYRAG	4 cut(s)	242, 410, 1075, 2445
SmoI	CTYRAG	4 cut(s)	242, 410, 1075, 2445
SsiI	CCGC	4 cut(s)	814, 928, 935, 1052
SspI	AATATT	1 cut(s)	553
SspMI	CTAG	8 cut(s)	653, 792, 906, 1025, 1413, 2150, 2370, 2453
SstI	GAGCTC	1 cut(s)	1510
StyD4I	CCNGG	4 cut(s)	1620, 1830, 1831, 2143
StyI	CCWWGG	4 cut(s)	1184, 1329, 1412, 2136
TaaI	ACNGT	6 cut(s)	176, 674, 961, 2230, 2401, 2463
TaiI	ACGT	7 cut(s)	285, 395, 454, 811, 925, 1809, 2346
TaqI	TCGA	7 cut(s)	94, 185, 1006, 1108, 1147, 1763, 2346
TatI	WGTACW	3 cut(s)	505, 1968, 2216
TfiI	GAWTC	4 cut(s)	212, 488, 1458, 1755
Tru1I	TTAA	7 cut(s)	113, 276, 1076, 1341, 1482, 1962, 2525
Tru9I	TTAA	7 cut(s)	113, 276, 1076, 1341, 1482, 1962, 2525
TscAI	CASTG	4 cut(s)	181, 684, 1197, 2239
TseFI	GTSAC	4 cut(s)	1066, 1553, 2230, 2470
TseI	GCWGC	8 cut(s)	737, 821, 851, 1136, 1688, 1718, 1952, 2380
Tsp45I	GTSAC	4 cut(s)	1066, 1553, 2230, 2470
TspMI	CCCGGG	1 cut(s)	1831
TspRI	CASTG	4 cut(s)	181, 684, 1197, 2239
Van91I	CCANNNNNTGG	3 cut(s)	1292, 1550, 2482
Vha464I	CTTAAG	1 cut(s)	1075
VpaK11BI	GGWCC	5 cut(s)	584, 1040, 1283, 1600, 1769
VspI	ATTAAT	1 cut(s)	1341
XapI	RAATTY	2 cut(s)	180, 1221
XceI	RCATGY	1 cut(s)	1084
XcmI	CCANNNNNNNNNTGG	1 cut(s)	455
XmaI	CCCGGG	1 cut(s)	1831
XmaJI	CCTAGG	1 cut(s)	1412
XmiI	GTMKAC	2 cut(s)	2403, 2458
XmnI	GAANNNNTTC	4 cut(s)	773, 887, 1002, 2508
XspI	CTAG	8 cut(s)	653, 792, 906, 1025, 1413, 2150, 2370, 2453

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.